BLASTX nr result
ID: Glycyrrhiza36_contig00029586
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza36_contig00029586
(257 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAX19931.1 viral replicase [Nandina mosaic virus] 174 1e-48
AMN10083.1 RNA-dependent RNA polymerase [Plantago asiatica mosai... 171 9e-48
AMY62703.1 RNA-dependent RNA polymerase [Plantago asiatica mosai... 167 2e-46
BAG12153.1 RNA-dependent RNA polymerase [Plantago asiatica mosai... 166 4e-46
AGW45389.1 RNA-dependent RNA polymerase, partial [Plantago asiat... 163 2e-45
BAG12148.1 RNA-dependent RNA polymerase [Plantago asiatica mosai... 164 2e-45
BAG12143.1 RNA-dependent RNA polymerase [Plantago asiatica mosai... 164 2e-45
BAG12138.1 RNA-dependent RNA polymerase [Plantago asiatica mosai... 164 2e-45
BAG12133.1 RNA-dependent RNA polymerase [Plantago asiatica mosai... 164 2e-45
BAG12128.1 RNA-dependent RNA polymerase [Plantago asiatica mosai... 164 2e-45
BAG12123.1 RNA-dependent RNA polymerase [Plantago asiatica mosai... 164 2e-45
ANY93292.1 RdRp [Plantago asiatica mosaic virus] 163 5e-45
AMY62723.1 RNA-dependent RNA polymerase [Plantago asiatica mosai... 163 5e-45
AMY62718.1 RNA-dependent RNA polymerase [Plantago asiatica mosai... 163 5e-45
AMY62713.1 RNA-dependent RNA polymerase [Plantago asiatica mosai... 163 5e-45
AMD78101.1 RdRP [Plantago asiatica mosaic virus] 163 5e-45
CEN56830.1 RNA-dependent RNA polymerase [Plantago asiatica mosai... 163 5e-45
NP_620836.1 replicase [Plantago asiatica mosaic virus] Q07518.1 ... 152 3e-41
NP_702988.1 RNA-dependent RNA polymerase [Tulip virus X] BAC1678... 147 2e-39
AAC54780.1 ORF [Cassava common mosaic virus] 117 3e-30
>AAX19931.1 viral replicase [Nandina mosaic virus]
Length = 1368
Score = 174 bits (440), Expect = 1e-48
Identities = 81/85 (95%), Positives = 83/85 (97%)
Frame = -3
Query: 255 PSFVTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASY 76
PSFVTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASY
Sbjct: 156 PSFVTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASY 215
Query: 75 FHKYDQLEWLTVGHLTAANQPTITA 1
FHKYDQLEWLT+GHL A NQPT+TA
Sbjct: 216 FHKYDQLEWLTIGHLQAPNQPTVTA 240
>AMN10083.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1387
Score = 171 bits (433), Expect = 9e-48
Identities = 80/85 (94%), Positives = 83/85 (97%)
Frame = -3
Query: 255 PSFVTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASY 76
PSF+TALFAHSP+LQTLYATLVLPPEALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASY
Sbjct: 156 PSFLTALFAHSPRLQTLYATLVLPPEALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASY 215
Query: 75 FHKYDQLEWLTVGHLTAANQPTITA 1
FH+YDQLEWLTVGHLTA QPTITA
Sbjct: 216 FHRYDQLEWLTVGHLTAPGQPTITA 240
>AMY62703.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
AMY62708.1 RNA-dependent RNA polymerase [Plantago
asiatica mosaic virus]
Length = 1380
Score = 167 bits (423), Expect = 2e-46
Identities = 79/85 (92%), Positives = 81/85 (95%)
Frame = -3
Query: 255 PSFVTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASY 76
PSFVTALFAHSPKLQTLYATLVLPPEALYRLRSL+PQIYTLTYSEDGFMYIPGGHAGASY
Sbjct: 156 PSFVTALFAHSPKLQTLYATLVLPPEALYRLRSLHPQIYTLTYSEDGFMYIPGGHAGASY 215
Query: 75 FHKYDQLEWLTVGHLTAANQPTITA 1
FHKY QLEWLTVGHLTA PT+TA
Sbjct: 216 FHKYSQLEWLTVGHLTAPGLPTVTA 240
>BAG12153.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 166 bits (421), Expect = 4e-46
Identities = 79/85 (92%), Positives = 80/85 (94%)
Frame = -3
Query: 255 PSFVTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASY 76
PSFVTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASY
Sbjct: 156 PSFVTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASY 215
Query: 75 FHKYDQLEWLTVGHLTAANQPTITA 1
FHKY QLEWLTVGHLT Q T+TA
Sbjct: 216 FHKYSQLEWLTVGHLTTPGQITVTA 240
>AGW45389.1 RNA-dependent RNA polymerase, partial [Plantago asiatica mosaic
virus]
Length = 669
Score = 163 bits (413), Expect = 2e-45
Identities = 78/85 (91%), Positives = 80/85 (94%)
Frame = -3
Query: 255 PSFVTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASY 76
PSFVTALFAHSPKLQTLYATLVLPPEALYRLRSL+PQIYTLTYSEDGFMYIPGGHAGASY
Sbjct: 156 PSFVTALFAHSPKLQTLYATLVLPPEALYRLRSLHPQIYTLTYSEDGFMYIPGGHAGASY 215
Query: 75 FHKYDQLEWLTVGHLTAANQPTITA 1
FHKY QLEWLTVGHLTA T+TA
Sbjct: 216 FHKYSQLEWLTVGHLTAPGLLTVTA 240
>BAG12148.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 164 bits (416), Expect = 2e-45
Identities = 78/85 (91%), Positives = 79/85 (92%)
Frame = -3
Query: 255 PSFVTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASY 76
PSFVTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASY
Sbjct: 156 PSFVTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASY 215
Query: 75 FHKYDQLEWLTVGHLTAANQPTITA 1
FH Y QLEWLTVGHLT Q T+TA
Sbjct: 216 FHNYSQLEWLTVGHLTTPGQITVTA 240
>BAG12143.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 164 bits (416), Expect = 2e-45
Identities = 78/85 (91%), Positives = 79/85 (92%)
Frame = -3
Query: 255 PSFVTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASY 76
PSFVTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASY
Sbjct: 156 PSFVTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASY 215
Query: 75 FHKYDQLEWLTVGHLTAANQPTITA 1
FH Y QLEWLTVGHLT Q T+TA
Sbjct: 216 FHNYSQLEWLTVGHLTTPGQITVTA 240
>BAG12138.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 164 bits (416), Expect = 2e-45
Identities = 78/85 (91%), Positives = 79/85 (92%)
Frame = -3
Query: 255 PSFVTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASY 76
PSFVTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASY
Sbjct: 156 PSFVTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASY 215
Query: 75 FHKYDQLEWLTVGHLTAANQPTITA 1
FH Y QLEWLTVGHLT Q T+TA
Sbjct: 216 FHNYSQLEWLTVGHLTTPGQITVTA 240
>BAG12133.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 164 bits (416), Expect = 2e-45
Identities = 78/85 (91%), Positives = 79/85 (92%)
Frame = -3
Query: 255 PSFVTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASY 76
PSFVTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASY
Sbjct: 156 PSFVTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASY 215
Query: 75 FHKYDQLEWLTVGHLTAANQPTITA 1
FH Y QLEWLTVGHLT Q T+TA
Sbjct: 216 FHNYSQLEWLTVGHLTTPGQITVTA 240
>BAG12128.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 164 bits (416), Expect = 2e-45
Identities = 78/85 (91%), Positives = 79/85 (92%)
Frame = -3
Query: 255 PSFVTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASY 76
PSFVTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASY
Sbjct: 156 PSFVTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASY 215
Query: 75 FHKYDQLEWLTVGHLTAANQPTITA 1
FH Y QLEWLTVGHLT Q T+TA
Sbjct: 216 FHNYSQLEWLTVGHLTTPGQITVTA 240
>BAG12123.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 164 bits (416), Expect = 2e-45
Identities = 78/85 (91%), Positives = 79/85 (92%)
Frame = -3
Query: 255 PSFVTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASY 76
PSFVTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASY
Sbjct: 156 PSFVTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASY 215
Query: 75 FHKYDQLEWLTVGHLTAANQPTITA 1
FH Y QLEWLTVGHLT Q T+TA
Sbjct: 216 FHNYSQLEWLTVGHLTTPGQITVTA 240
>ANY93292.1 RdRp [Plantago asiatica mosaic virus]
Length = 1380
Score = 163 bits (413), Expect = 5e-45
Identities = 78/85 (91%), Positives = 80/85 (94%)
Frame = -3
Query: 255 PSFVTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASY 76
PSFVTALFAHSPKLQTLYATLVLPPEALYRLRSL+PQIYTLTYSEDGFMYIPGGHAGASY
Sbjct: 156 PSFVTALFAHSPKLQTLYATLVLPPEALYRLRSLHPQIYTLTYSEDGFMYIPGGHAGASY 215
Query: 75 FHKYDQLEWLTVGHLTAANQPTITA 1
FHKY QLEWLTVGHLTA T+TA
Sbjct: 216 FHKYSQLEWLTVGHLTAPGLLTVTA 240
>AMY62723.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 163 bits (413), Expect = 5e-45
Identities = 78/85 (91%), Positives = 80/85 (94%)
Frame = -3
Query: 255 PSFVTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASY 76
PSFVTALFAHSPKLQTLYATLVLPPEALYRLRSL+PQIYTLTYSEDGFMYIPGGHAGASY
Sbjct: 156 PSFVTALFAHSPKLQTLYATLVLPPEALYRLRSLHPQIYTLTYSEDGFMYIPGGHAGASY 215
Query: 75 FHKYDQLEWLTVGHLTAANQPTITA 1
FHKY QLEWLTVGHLTA T+TA
Sbjct: 216 FHKYSQLEWLTVGHLTAPGLLTVTA 240
>AMY62718.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 163 bits (413), Expect = 5e-45
Identities = 78/85 (91%), Positives = 80/85 (94%)
Frame = -3
Query: 255 PSFVTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASY 76
PSFVTALFAHSPKLQTLYATLVLPPEALYRLRSL+PQIYTLTYSEDGFMYIPGGHAGASY
Sbjct: 156 PSFVTALFAHSPKLQTLYATLVLPPEALYRLRSLHPQIYTLTYSEDGFMYIPGGHAGASY 215
Query: 75 FHKYDQLEWLTVGHLTAANQPTITA 1
FHKY QLEWLTVGHLTA T+TA
Sbjct: 216 FHKYSQLEWLTVGHLTAPGLLTVTA 240
>AMY62713.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 163 bits (413), Expect = 5e-45
Identities = 78/85 (91%), Positives = 80/85 (94%)
Frame = -3
Query: 255 PSFVTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASY 76
PSFVTALFAHSPKLQTLYATLVLPPEALYRLRSL+PQIYTLTYSEDGFMYIPGGHAGASY
Sbjct: 156 PSFVTALFAHSPKLQTLYATLVLPPEALYRLRSLHPQIYTLTYSEDGFMYIPGGHAGASY 215
Query: 75 FHKYDQLEWLTVGHLTAANQPTITA 1
FHKY QLEWLTVGHLTA T+TA
Sbjct: 216 FHKYSQLEWLTVGHLTAPGLLTVTA 240
>AMD78101.1 RdRP [Plantago asiatica mosaic virus]
Length = 1380
Score = 163 bits (413), Expect = 5e-45
Identities = 78/85 (91%), Positives = 80/85 (94%)
Frame = -3
Query: 255 PSFVTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASY 76
PSFVTALFAHSPKLQTLYATLVLPPEALYRLRSL+PQIYTLTYSEDGFMYIPGGHAGASY
Sbjct: 156 PSFVTALFAHSPKLQTLYATLVLPPEALYRLRSLHPQIYTLTYSEDGFMYIPGGHAGASY 215
Query: 75 FHKYDQLEWLTVGHLTAANQPTITA 1
FHKY QLEWLTVGHLTA T+TA
Sbjct: 216 FHKYSQLEWLTVGHLTAPGLLTVTA 240
>CEN56830.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 163 bits (413), Expect = 5e-45
Identities = 78/85 (91%), Positives = 80/85 (94%)
Frame = -3
Query: 255 PSFVTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASY 76
PSFVTALFAHSPKLQTLYATLVLPPEALYRLRSL+PQIYTLTYSEDGFMYIPGGHAGASY
Sbjct: 156 PSFVTALFAHSPKLQTLYATLVLPPEALYRLRSLHPQIYTLTYSEDGFMYIPGGHAGASY 215
Query: 75 FHKYDQLEWLTVGHLTAANQPTITA 1
FHKY QLEWLTVGHLTA T+TA
Sbjct: 216 FHKYSQLEWLTVGHLTAPGLLTVTA 240
>NP_620836.1 replicase [Plantago asiatica mosaic virus] Q07518.1 RecName:
Full=RNA replication protein; AltName: Full=156 kDa
protein; AltName: Full=ORF1 protein; Includes: RecName:
Full=RNA-directed RNA polymerase; Includes: RecName:
Full=Helicase CAA79761.1 156K-protein [Plantago asiatica
mosaic virus]
Length = 1385
Score = 152 bits (385), Expect = 3e-41
Identities = 74/85 (87%), Positives = 77/85 (90%)
Frame = -3
Query: 255 PSFVTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASY 76
PSF+TALFAHSP+LQTLYATLVLPPE RSLYPQIYTLTYSEDGFMYIPGGHAGASY
Sbjct: 156 PSFLTALFAHSPRLQTLYATLVLPPEPSTS-RSLYPQIYTLTYSEDGFMYIPGGHAGASY 214
Query: 75 FHKYDQLEWLTVGHLTAANQPTITA 1
FHKYDQLEWLTVGHLTA PT+TA
Sbjct: 215 FHKYDQLEWLTVGHLTAPGCPTVTA 239
>NP_702988.1 RNA-dependent RNA polymerase [Tulip virus X] BAC16785.1
RNA-dependent RNA polymerase [Tulip virus X]
Length = 1361
Score = 147 bits (371), Expect = 2e-39
Identities = 67/85 (78%), Positives = 78/85 (91%)
Frame = -3
Query: 255 PSFVTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASY 76
PSF+T+LFA SPKLQTLYAT+VLPPEALYRLRSLYP++YTLTYS+DGFMYIPGGHAGASY
Sbjct: 156 PSFITSLFARSPKLQTLYATMVLPPEALYRLRSLYPEVYTLTYSDDGFMYIPGGHAGASY 215
Query: 75 FHKYDQLEWLTVGHLTAANQPTITA 1
+HKYDQL+WLT G+L + T+TA
Sbjct: 216 YHKYDQLQWLTAGYL-ISESTTVTA 239
>AAC54780.1 ORF [Cassava common mosaic virus]
Length = 300
Score = 117 bits (292), Expect = 3e-30
Identities = 52/73 (71%), Positives = 60/73 (82%)
Frame = -3
Query: 255 PSFVTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASY 76
P FV LFA SPKL+T YAT+VLPPEAL+++ SLYPQIYTL Y E GF+Y PGGHAGASY
Sbjct: 156 PKFVGTLFARSPKLKTFYATMVLPPEALHKMNSLYPQIYTLQYKEKGFIYTPGGHAGASY 215
Query: 75 FHKYDQLEWLTVG 37
+H+Y QL WL VG
Sbjct: 216 YHEYSQLGWLDVG 228