BLASTX nr result
ID: Glycyrrhiza36_contig00029154
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza36_contig00029154
(614 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
GAU26239.1 hypothetical protein TSUD_224300 [Trifolium subterran... 59 8e-18
KYP37594.1 Putative ribonuclease H protein At1g65750 family, par... 51 1e-13
KYP67585.1 Putative ribonuclease H protein At1g65750 family [Caj... 56 7e-13
KYP63365.1 Putative ribonuclease H protein At1g65750 family [Caj... 68 1e-12
XP_016164673.1 PREDICTED: uncharacterized protein LOC107607211 [... 67 2e-12
KYP30980.1 Retrovirus-related Pol polyprotein LINE-1 [Cajanus ca... 59 2e-12
AFK45241.1 unknown [Lotus japonicus] 62 1e-11
KYP44518.1 Putative ribonuclease H protein At1g65750 family, par... 62 1e-11
KYP54027.1 Putative ribonuclease H protein At1g65750 family [Caj... 67 1e-11
KYP35215.1 Putative ribonuclease H protein At1g65750 family, par... 59 2e-11
KYP65942.1 Putative ribonuclease H protein At1g65750 family [Caj... 55 2e-11
KHN01269.1 Putative ribonuclease H protein [Glycine soja] 69 3e-11
XP_014631536.1 PREDICTED: uncharacterized protein LOC102670281 [... 69 7e-11
KYP40438.1 Putative ribonuclease H protein At1g65750 family, par... 53 7e-11
KYP33915.1 Putative ribonuclease H protein At1g65750 family, par... 54 8e-11
KYP45881.1 Putative ribonuclease H protein At1g65750 family [Caj... 52 1e-10
OMO81305.1 reverse transcriptase [Corchorus capsularis] 52 1e-10
KYP60192.1 Putative ribonuclease H protein At1g65750 family, par... 57 3e-10
KYP76974.1 Putative ribonuclease H protein At1g65750, partial [C... 55 3e-10
KYP59936.1 Putative ribonuclease H protein At1g65750 family [Caj... 50 3e-10
>GAU26239.1 hypothetical protein TSUD_224300 [Trifolium subterraneum]
Length = 1250
Score = 59.3 bits (142), Expect(4) = 8e-18
Identities = 33/74 (44%), Positives = 45/74 (60%)
Frame = -3
Query: 471 GVLRDDCSRFCFGFSAFLGSCSITEAELQAILKGLHDTRSKGFQKIIVETDSLAAKNLIL 292
GVLR+ F FSA GS S+ AEL I+ GL ++KG ++I VE+DS+ A NLI
Sbjct: 1111 GVLRNCHGGFLVAFSARAGSVSVVHAELWGIINGLELAKNKGLKRIRVESDSMIAINLIR 1170
Query: 291 GDSSVLHPCFNLVK 250
+ HP F+LV+
Sbjct: 1171 NGCNKEHPAFHLVQ 1184
Score = 38.5 bits (88), Expect(4) = 8e-18
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = -2
Query: 148 MDLDLNCIIFDVIPSFASLVIVADGSGTFFPRGY 47
+ L NCIIFD +P F + ++AD G FPRG+
Sbjct: 1217 LSLSNNCIIFDHVPGFLVMPLMADSVGIGFPRGF 1250
Score = 34.3 bits (77), Expect(4) = 8e-18
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -2
Query: 559 LKWVAPGAGWVKLNCDGAVTNYGARAACG 473
++W P ++ LNCDGAVT A CG
Sbjct: 1082 IRWERPPENFIALNCDGAVTGLTGLAGCG 1110
Score = 25.0 bits (53), Expect(4) = 8e-18
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -1
Query: 239 QLMELEEDTKLLHTLREANQVAYGFANYGMN 147
+L E E HT REANQVA A + ++
Sbjct: 1188 RLTEGMESVLWQHTWREANQVADALAKFSLS 1218
>KYP37594.1 Putative ribonuclease H protein At1g65750 family, partial [Cajanus
cajan]
Length = 522
Score = 51.2 bits (121), Expect(4) = 1e-13
Identities = 29/77 (37%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Frame = -3
Query: 471 GVLRDDCSRFCFGFSAFLGSCSITEAELQAILKGLHDTRSKGF-QKIIVETDSLAAKNLI 295
GV+R+ +F F FS +G CS+ +AEL AI GL + + II+E+DS A +
Sbjct: 382 GVIRNSNGKFIFAFSNMIGVCSVVQAELWAIFHGLRLLKERSLVVDIIIESDSALAVKFL 441
Query: 294 LGDSSVLHPCFNLVKEI 244
S HP ++LV I
Sbjct: 442 NEGCSREHPYYSLVNHI 458
Score = 31.6 bits (70), Expect(4) = 1e-13
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = -1
Query: 203 HTLREANQVAYGFANYGMN 147
H LREANQVA GFA +G++
Sbjct: 472 HVLREANQVADGFAKFGLS 490
Score = 30.8 bits (68), Expect(4) = 1e-13
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 4/47 (8%)
Frame = -2
Query: 601 RITSFGPAVQRHRD----LKWVAPGAGWVKLNCDGAVTNYGARAACG 473
++ S GP + + W P G +KLNCDGAV + A+CG
Sbjct: 336 KVNSIGPKPTHYNIDTNLISWSRPPPGVLKLNCDGAVA-ASSIASCG 381
Score = 29.3 bits (64), Expect(4) = 1e-13
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = -2
Query: 127 IIFDVIPSFASLVIVADGSGTFFPRGY 47
+ FD PS++ +VAD S FPRG+
Sbjct: 496 LCFDSPPSWSHFSLVADDSAVLFPRGF 522
>KYP67585.1 Putative ribonuclease H protein At1g65750 family [Cajanus cajan]
Length = 363
Score = 56.2 bits (134), Expect(3) = 7e-13
Identities = 33/77 (42%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Frame = -3
Query: 471 GVLRDDCSRFCFGFSAFLGSCSITEAELQAILKGLHDTRSKGFQK-IIVETDSLAAKNLI 295
G++R+ F GFS LG CSI +AEL AI GL + KGF++ IIVE DS A +
Sbjct: 177 GIIRNYLGGFIMGFSCKLGQCSILQAELWAIFHGLRIIKEKGFKEDIIVELDSSLAIKFL 236
Query: 294 LGDSSVLHPCFNLVKEI 244
S H C L+ I
Sbjct: 237 NEGCSASHSCAPLINSI 253
Score = 37.7 bits (86), Expect(3) = 7e-13
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = -2
Query: 559 LKWVAPGAGWVKLNCDGAVTNYGARAACG 473
++W P G +KLNCDGAV G + CG
Sbjct: 148 IRWQPPPLGSIKLNCDGAVRGVGRKVGCG 176
Score = 26.9 bits (58), Expect(3) = 7e-13
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -1
Query: 239 QLMELEEDTKLLHTLREANQVAYGFAN 159
+L ++E+D H REANQV AN
Sbjct: 255 ELADMEQDLNCSHIYREANQVNDAMAN 281
>KYP63365.1 Putative ribonuclease H protein At1g65750 family [Cajanus cajan]
Length = 171
Score = 67.8 bits (164), Expect(2) = 1e-12
Identities = 38/77 (49%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Frame = -3
Query: 471 GVLRDDCSRFCFGFSAFLGSCSITEAELQAILKGLHDTRSKG-FQKIIVETDSLAAKNLI 295
G++RD F ++ LGSCSIT AE+ AIL GL R+ +I+VETDSL + NLI
Sbjct: 34 GIVRDAAGTFVLAYACKLGSCSITNAEIWAILHGLRIIRNNNLLGRILVETDSLTSINLI 93
Query: 294 LGDSSVLHPCFNLVKEI 244
HP FNLVKEI
Sbjct: 94 SHGCDPSHPSFNLVKEI 110
Score = 32.7 bits (73), Expect(2) = 1e-12
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = -2
Query: 553 WVAPGAGWVKLNCDGAVTNYGARAACG 473
W P A +KLNCDG+V+ G CG
Sbjct: 8 WSRPPANHLKLNCDGSVSARGLAGCCG 34
>XP_016164673.1 PREDICTED: uncharacterized protein LOC107607211 [Arachis ipaensis]
Length = 1901
Score = 66.6 bits (161), Expect(3) = 2e-12
Identities = 36/76 (47%), Positives = 46/76 (60%)
Frame = -3
Query: 471 GVLRDDCSRFCFGFSAFLGSCSITEAELQAILKGLHDTRSKGFQKIIVETDSLAAKNLIL 292
GV R+ RF GFS LG+CSI AEL A++ GL +KG+Q + VE+DS A N I
Sbjct: 1762 GVFRNSDGRFLQGFSCNLGNCSIMHAELWAVIHGLSIATTKGYQCLFVESDSAEAINFIN 1821
Query: 291 GDSSVLHPCFNLVKEI 244
S HPC LV++I
Sbjct: 1822 RGCSPTHPCAPLVQDI 1837
Score = 30.0 bits (66), Expect(3) = 2e-12
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -2
Query: 559 LKWVAPGAGWVKLNCDGAVTNYGARAACG 473
++W P G VK+N DG+ + AACG
Sbjct: 1733 IRWSCPEEGCVKVNVDGSWFGHTRNAACG 1761
Score = 22.3 bits (46), Expect(3) = 2e-12
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -1
Query: 206 LHTLREANQVAYGFANYG 153
LH+LREAN VA A G
Sbjct: 1850 LHSLREANSVADLLAKKG 1867
>KYP30980.1 Retrovirus-related Pol polyprotein LINE-1 [Cajanus cajan]
Length = 565
Score = 58.5 bits (140), Expect(3) = 2e-12
Identities = 31/77 (40%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Frame = -3
Query: 471 GVLRDDCSRFCFGFSAFLGSCSITEAELQAILKGLHDTRSKGFQ-KIIVETDSLAAKNLI 295
GVLRD +F FGF+ +G+CS+ +AEL AI GL + + ++E+DS A L+
Sbjct: 425 GVLRDCLGKFIFGFAGKIGTCSVLQAELWAIFHGLRIIKEMNLKGNFLIESDSEIAVKLL 484
Query: 294 LGDSSVLHPCFNLVKEI 244
S HPC++LV I
Sbjct: 485 NEGCSREHPCYSLVNHI 501
Score = 33.5 bits (75), Expect(3) = 2e-12
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = -2
Query: 577 VQRHRDLKWVAPGAGWVKLNCDGAVTNYGARAACG 473
++ ++ + W+ P +KLNCDGAV A AACG
Sbjct: 391 LKTNQHIGWIRPPNNTLKLNCDGAVDG-NAHAACG 424
Score = 26.9 bits (58), Expect(3) = 2e-12
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = -1
Query: 203 HTLREANQVAYGFANYGMN 147
H LREANQVA FA +G +
Sbjct: 515 HILREANQVADRFAKHGFS 533
>AFK45241.1 unknown [Lotus japonicus]
Length = 165
Score = 61.6 bits (148), Expect(2) = 1e-11
Identities = 31/75 (41%), Positives = 41/75 (54%)
Frame = -3
Query: 471 GVLRDDCSRFCFGFSAFLGSCSITEAELQAILKGLHDTRSKGFQKIIVETDSLAAKNLIL 292
GV RD F GF+ +G CSI AEL ++ GL +GF KI++E DS +
Sbjct: 56 GVPRDHHGNFLLGFTMKVGVCSILHAELWGLVHGLRFVLGRGFSKILIEADSAGTIEFLN 115
Query: 291 GDSSVLHPCFNLVKE 247
V+HPCF LV+E
Sbjct: 116 KGCPVVHPCFPLVRE 130
Score = 35.8 bits (81), Expect(2) = 1e-11
Identities = 18/35 (51%), Positives = 20/35 (57%)
Frame = -2
Query: 577 VQRHRDLKWVAPGAGWVKLNCDGAVTNYGARAACG 473
VQRH LKW WVKLN DG+ + AACG
Sbjct: 21 VQRHVVLKWTPTLESWVKLNTDGSYSVDEDCAACG 55
>KYP44518.1 Putative ribonuclease H protein At1g65750 family, partial [Cajanus
cajan]
Length = 584
Score = 61.6 bits (148), Expect(2) = 1e-11
Identities = 36/77 (46%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Frame = -3
Query: 471 GVLRDDCSRFCFGFSAFLGSCSITEAELQAILKGLHDTRSKGF-QKIIVETDSLAAKNLI 295
GV+R+ +F FS LG CSI EAEL+AIL+G + Q I+VE+DSL A +I
Sbjct: 445 GVVRNSNGKFVVAFSGRLGRCSILEAELRAILQGTRIILERNVGQVILVESDSLEAIRII 504
Query: 294 LGDSSVLHPCFNLVKEI 244
S +HPC +LV+EI
Sbjct: 505 NEGCSRVHPCCHLVREI 521
Score = 35.4 bits (80), Expect(2) = 1e-11
Identities = 16/31 (51%), Positives = 20/31 (64%)
Frame = -2
Query: 565 RDLKWVAPGAGWVKLNCDGAVTNYGARAACG 473
R+ +W P G +KLNCDGAV G A+CG
Sbjct: 415 RNTQWTYPPTGALKLNCDGAVARNG-EASCG 444
>KYP54027.1 Putative ribonuclease H protein At1g65750 family [Cajanus cajan]
Length = 459
Score = 67.4 bits (163), Expect(2) = 1e-11
Identities = 38/77 (49%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Frame = -3
Query: 471 GVLRDDCSRFCFGFSAFLGSCSITEAELQAILKGLHDTRSKG-FQKIIVETDSLAAKNLI 295
G++R+ F ++ LGSCSIT AE+ AIL GL R+ +I+VETDSL A NLI
Sbjct: 322 GIVRESAGAFVLAYACKLGSCSITNAEIWAILHGLRIIRNNNLLGRILVETDSLTAVNLI 381
Query: 294 LGDSSVLHPCFNLVKEI 244
HP FNLVKEI
Sbjct: 382 SHGCDHSHPNFNLVKEI 398
Score = 29.6 bits (65), Expect(2) = 1e-11
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = -2
Query: 553 WVAPGAGWVKLNCDGAVTNYGARAACG 473
W P A +KLNCDG+V+ G A CG
Sbjct: 296 WSRPPANHLKLNCDGSVSVRGL-AVCG 321
>KYP35215.1 Putative ribonuclease H protein At1g65750 family, partial [Cajanus
cajan] KYP35220.1 Putative ribonuclease H protein
At1g65750 family, partial [Cajanus cajan]
Length = 170
Score = 59.3 bits (142), Expect(3) = 2e-11
Identities = 33/77 (42%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Frame = -3
Query: 471 GVLRDDCSRFCFGFSAFLGSCSITEAELQAILKGLHDTRSKG-FQKIIVETDSLAAKNLI 295
GVL+D F F F LG+CS+ +AEL AI GL KG F II+E+DS A +
Sbjct: 30 GVLQDSSGNFVFAFVGMLGTCSVVQAELWAIFHGLQIINEKGIFDPIIIESDSALAVKFL 89
Query: 294 LGDSSVLHPCFNLVKEI 244
S +PC++LV I
Sbjct: 90 NEGCSRENPCYSLVNLI 106
Score = 32.7 bits (73), Expect(3) = 2e-11
Identities = 16/27 (59%), Positives = 18/27 (66%)
Frame = -2
Query: 553 WVAPGAGWVKLNCDGAVTNYGARAACG 473
W P G +KLNCDGAV N + AACG
Sbjct: 4 WKFPPEGILKLNCDGAV-NVNSIAACG 29
Score = 23.9 bits (50), Expect(3) = 2e-11
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = -2
Query: 124 IFDVIPSFASLVIVADGSGTFFPRGY 47
IF P + + AD S FPRG+
Sbjct: 145 IFSSPPPWVMAPLFADSSNVIFPRGF 170
>KYP65942.1 Putative ribonuclease H protein At1g65750 family [Cajanus cajan]
Length = 457
Score = 55.1 bits (131), Expect(3) = 2e-11
Identities = 31/77 (40%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Frame = -3
Query: 471 GVLRDDCSRFCFGFSAFLGSCSITEAELQAILKGLHDTRSKGFQK-IIVETDSLAAKNLI 295
G+++D F GF LG CSI +AEL I GL + KGF++ IIVE+DS A +
Sbjct: 317 GIIKDYLGGFITGFPCKLGQCSILQAELWTIFHGLRIIKDKGFKEDIIVESDSSLAIKFL 376
Query: 294 LGDSSVLHPCFNLVKEI 244
D + H C L+ I
Sbjct: 377 NEDCNASHSCAPLINSI 393
Score = 35.8 bits (81), Expect(3) = 2e-11
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = -2
Query: 559 LKWVAPGAGWVKLNCDGAVTNYGARAACG 473
++W P G +KLNCD AV G +A CG
Sbjct: 288 IRWQPPPLGSIKLNCDRAVHGVGRKAGCG 316
Score = 24.6 bits (52), Expect(3) = 2e-11
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = -1
Query: 239 QLMELEEDTKLLHTLREANQVAYGFAN 159
+L ++E+D H +EANQV N
Sbjct: 395 ELADMEQDLNCSHIYQEANQVVDAMTN 421
>KHN01269.1 Putative ribonuclease H protein [Glycine soja]
Length = 152
Score = 68.6 bits (166), Expect = 3e-11
Identities = 37/86 (43%), Positives = 50/86 (58%)
Frame = -3
Query: 471 GVLRDDCSRFCFGFSAFLGSCSITEAELQAILKGLHDTRSKGFQKIIVETDSLAAKNLIL 292
G +RD F F A GSC++ AEL AIL G+ S+GF++I V++DSL A L+
Sbjct: 66 GAIRDHHGAFICNFHAKNGSCAVIYAELWAILLGIKLAWSRGFRRIRVDSDSLNAIKLLE 125
Query: 291 GDSSVLHPCFNLVKEI*TAYGVGGGH 214
G S PC+NLV++I Y G H
Sbjct: 126 GSCSRFRPCYNLVRDIHQGYANSGNH 151
>XP_014631536.1 PREDICTED: uncharacterized protein LOC102670281 [Glycine max]
Length = 214
Score = 68.9 bits (167), Expect = 7e-11
Identities = 35/73 (47%), Positives = 48/73 (65%)
Frame = -3
Query: 471 GVLRDDCSRFCFGFSAFLGSCSITEAELQAILKGLHDTRSKGFQKIIVETDSLAAKNLIL 292
GV+RD + GF A++GS S+ +AEL AIL G S+GF+KI VE+DSL A LI
Sbjct: 142 GVIRDHMGAYLCGFGAYIGSASVLKAELMAILFGFKLAWSRGFRKIRVESDSLNAIRLIP 201
Query: 291 GDSSVLHPCFNLV 253
G S L PC++++
Sbjct: 202 GQGSNLRPCYDII 214
>KYP40438.1 Putative ribonuclease H protein At1g65750 family, partial [Cajanus
cajan]
Length = 1356
Score = 52.8 bits (125), Expect(4) = 7e-11
Identities = 31/77 (40%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Frame = -3
Query: 471 GVLRDDCSRFCFGFSAFLGSCSITEAELQAILKGLHDTRSKGF-QKIIVETDSLAAKNLI 295
GVLRD F F F+ LG+CS+ +AEL AI L +G II+E+DS A +
Sbjct: 1216 GVLRDSSGNFIFAFAGRLGTCSVVQAELWAIFHELRIFIERGLADPIIIESDSALAVKFL 1275
Query: 294 LGDSSVLHPCFNLVKEI 244
S +PC++LV I
Sbjct: 1276 NEGCSRENPCYSLVNLI 1292
Score = 28.5 bits (62), Expect(4) = 7e-11
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = -2
Query: 553 WVAPGAGWVKLNCDGAVTNYGARAACG 473
W P G +KLNCDG V + AACG
Sbjct: 1190 WNFPPEGILKLNCDGVVDG-NSIAACG 1215
Score = 26.2 bits (56), Expect(4) = 7e-11
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -1
Query: 218 DTKLLHTLREANQVAYGFANYGMNGL 141
+ K +H LREANQVA A G++ L
Sbjct: 1301 EVKCVHILREANQVADCLAKRGIDFL 1326
Score = 25.4 bits (54), Expect(4) = 7e-11
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = -2
Query: 124 IFDVIPSFASLVIVADGSGTFFPRGY 47
IF P +A + AD S FPRG+
Sbjct: 1331 IFSSPPPWARAPLFADSSNVIFPRGF 1356
>KYP33915.1 Putative ribonuclease H protein At1g65750 family, partial [Cajanus
cajan]
Length = 148
Score = 53.5 bits (127), Expect(3) = 8e-11
Identities = 30/77 (38%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Frame = -3
Query: 471 GVLRDDCSRFCFGFSAFLGSCSITEAELQAILKGLHDTRSKGFQK-IIVETDSLAAKNLI 295
GVLRD F F+ LG+C++ +AEL AI GL + K II+E+DS A +
Sbjct: 27 GVLRDSDGTFIVAFAGLLGTCTVVQAELWAIYHGLRLIKDKFISSHIIIESDSAIAVKFL 86
Query: 294 LGDSSVLHPCFNLVKEI 244
HPC+ LV I
Sbjct: 87 NEGCPQAHPCYALVNHI 103
Score = 32.0 bits (71), Expect(3) = 8e-11
Identities = 14/20 (70%), Positives = 16/20 (80%)
Frame = -1
Query: 206 LHTLREANQVAYGFANYGMN 147
+HTLREANQVA GFA G +
Sbjct: 116 IHTLREANQVADGFAKIGFS 135
Score = 28.5 bits (62), Expect(3) = 8e-11
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = -2
Query: 553 WVAPGAGWVKLNCDGAVTNYGARAACG 473
W P +KLNCD AV+N ++A+CG
Sbjct: 1 WNPPPPNILKLNCDRAVSNL-SKASCG 26
>KYP45881.1 Putative ribonuclease H protein At1g65750 family [Cajanus cajan]
Length = 194
Score = 51.6 bits (122), Expect(3) = 1e-10
Identities = 29/77 (37%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Frame = -3
Query: 471 GVLRDDCSRFCFGFSAFLGSCSITEAELQAILKGLHDTRSKGFQ-KIIVETDSLAAKNLI 295
GV+R+ +F F FS +G CS+ +AEL AI GL + + II+E+DS A +
Sbjct: 73 GVIRNSNGKFIFAFSNMIGVCSVVQAELCAIFHGLRLLKERSLMVDIIIESDSALAVKFL 132
Query: 294 LGDSSVLHPCFNLVKEI 244
S HP ++LV I
Sbjct: 133 NEGCSREHPYYSLVNHI 149
Score = 33.1 bits (74), Expect(3) = 1e-10
Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 4/47 (8%)
Frame = -2
Query: 601 RITSFGPAVQRHRD----LKWVAPGAGWVKLNCDGAVTNYGARAACG 473
++ S GP H + W P G +KLNCDGAV + A+CG
Sbjct: 27 KVNSIGPKPTHHNIDTNLISWSRPPPGVLKLNCDGAVV-ASSIASCG 72
Score = 28.5 bits (62), Expect(3) = 1e-10
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = -1
Query: 203 HTLREANQVAYGFANYGMN 147
H LREANQVA GFA + ++
Sbjct: 163 HVLREANQVADGFAKFELS 181
>OMO81305.1 reverse transcriptase [Corchorus capsularis]
Length = 1538
Score = 52.0 bits (123), Expect(4) = 1e-10
Identities = 31/76 (40%), Positives = 42/76 (55%)
Frame = -3
Query: 471 GVLRDDCSRFCFGFSAFLGSCSITEAELQAILKGLHDTRSKGFQKIIVETDSLAAKNLIL 292
GV+R + GF LG CS EAELQAI +GL + ++ II ETD+L A +LI
Sbjct: 1396 GVIRSAVGSWLMGFKLHLGVCSNVEAELQAIRQGLLVAWNCSYRDIICETDALIAIDLIK 1455
Query: 291 GDSSVLHPCFNLVKEI 244
+ HP L+ +I
Sbjct: 1456 NGDAKFHPLGYLLIDI 1471
Score = 27.7 bits (60), Expect(4) = 1e-10
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -2
Query: 145 DLDLNCIIFDVIPSFASLVIVADGSGTFFPRGY 47
+LD N + P ++ AD +G F+PRGY
Sbjct: 1503 ELDDNFELLPAPPDEVKSILNADTTGVFYPRGY 1535
Score = 26.9 bits (58), Expect(4) = 1e-10
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = -2
Query: 583 PAVQRHRDLKWVAPGAGWVKLNCDGAVTNYGARAACG 473
P + + ++WV P VKLN DGA A G
Sbjct: 1359 PLLSQDLQVRWVPPEDAVVKLNTDGAAKGNPGVAGAG 1395
Score = 25.0 bits (53), Expect(4) = 1e-10
Identities = 14/28 (50%), Positives = 15/28 (53%)
Frame = -1
Query: 242 RQLMELEEDTKLLHTLREANQVAYGFAN 159
RQL+ E KL HT RE N A AN
Sbjct: 1472 RQLLHREWRCKLQHTYREGNFCADWLAN 1499
>KYP60192.1 Putative ribonuclease H protein At1g65750 family, partial [Cajanus
cajan]
Length = 192
Score = 57.0 bits (136), Expect(2) = 3e-10
Identities = 34/77 (44%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Frame = -3
Query: 471 GVLRDDCSRFCFGFSAFLGSCSITEAELQAILKGLHDTRSKGF-QKIIVETDSLAAKNLI 295
GV+R+ +F F LG CSI EAEL+AIL+G + Q I+VE+DS A +I
Sbjct: 53 GVVRNSNGKFVVAFFGRLGRCSILEAELRAILQGTRIILERNVGQVILVESDSSEAIRII 112
Query: 294 LGDSSVLHPCFNLVKEI 244
S +HPC +LV+EI
Sbjct: 113 NEGCSRVHPCCHLVREI 129
Score = 35.4 bits (80), Expect(2) = 3e-10
Identities = 16/31 (51%), Positives = 20/31 (64%)
Frame = -2
Query: 565 RDLKWVAPGAGWVKLNCDGAVTNYGARAACG 473
R+ +W P G +KLNCDGAV G A+CG
Sbjct: 23 RNTQWTYPPTGALKLNCDGAVARNG-EASCG 52
>KYP76974.1 Putative ribonuclease H protein At1g65750, partial [Cajanus cajan]
Length = 189
Score = 55.5 bits (132), Expect(2) = 3e-10
Identities = 32/76 (42%), Positives = 44/76 (57%)
Frame = -3
Query: 471 GVLRDDCSRFCFGFSAFLGSCSITEAELQAILKGLHDTRSKGFQKIIVETDSLAAKNLIL 292
GV+R+ RF F F++ L +CSI EAEL AI G+ + S+ F +IVE DS +A L+
Sbjct: 50 GVVRNWEGRFIFAFASALENCSIVEAELWAIKIGMEEAISRRFLNLIVENDSYSAIELVN 109
Query: 291 GDSSVLHPCFNLVKEI 244
HP + LV I
Sbjct: 110 RGVQKSHPYYALVSSI 125
Score = 37.0 bits (84), Expect(2) = 3e-10
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = -2
Query: 553 WVAPGAGWVKLNCDGAVTNYGARAACG 473
W P ++K+NCDGA T++G +AA G
Sbjct: 23 WTVPPQNFIKINCDGAFTSHGNKAAAG 49
>KYP59936.1 Putative ribonuclease H protein At1g65750 family [Cajanus cajan]
Length = 116
Score = 50.4 bits (119), Expect(3) = 3e-10
Identities = 26/59 (44%), Positives = 36/59 (61%)
Frame = -3
Query: 396 AELQAILKGLHDTRSKGFQKIIVETDSLAAKNLILGDSSVLHPCFNLVKEI*TAYGVGG 220
AEL AI G+ ++GF K++VE+DSL A L+ S HPCF+LV+ I + GG
Sbjct: 2 AELWAIYIGITTAWNRGFTKLVVESDSLLAVGLLQNGCSSCHPCFSLVQSILSFVAAGG 60
Score = 32.3 bits (72), Expect(3) = 3e-10
Identities = 15/22 (68%), Positives = 16/22 (72%)
Frame = -1
Query: 218 DTKLLHTLREANQVAYGFANYG 153
D + H LREANQVA G ANYG
Sbjct: 61 DFECRHILREANQVADGLANYG 82
Score = 29.3 bits (64), Expect(3) = 3e-10
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = -2
Query: 133 NCIIFDVIPSFASLVIVADGSGTFFPRGY 47
N +F+ + F SLV++AD S T F RG+
Sbjct: 88 NLHVFENVMPFISLVVLADVSSTIFLRGF 116