BLASTX nr result
ID: Glycyrrhiza36_contig00028086
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza36_contig00028086
(361 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
GAU20014.1 hypothetical protein TSUD_273490 [Trifolium subterran... 90 2e-20
KYP59205.1 Putative ribonuclease H protein At1g65750 family, par... 81 9e-18
KYP33915.1 Putative ribonuclease H protein At1g65750 family, par... 79 3e-16
GAU42896.1 hypothetical protein TSUD_232070 [Trifolium subterran... 66 2e-14
KHN04118.1 Putative ribonuclease H protein [Glycine soja] 71 2e-13
KYP39537.1 Putative ribonuclease H protein At1g65750 family [Caj... 72 2e-13
GAU42897.1 hypothetical protein TSUD_232080 [Trifolium subterran... 67 2e-13
KYP49773.1 Putative ribonuclease H protein At1g65750 family, par... 70 5e-13
KYP59936.1 Putative ribonuclease H protein At1g65750 family [Caj... 69 7e-13
GAU19717.1 hypothetical protein TSUD_78420 [Trifolium subterraneum] 70 8e-13
KYP49751.1 Putative ribonuclease H protein At1g65750 family, par... 70 1e-12
KYP52376.1 Putative ribonuclease H protein At1g65750 family, par... 70 1e-12
KYP30980.1 Retrovirus-related Pol polyprotein LINE-1 [Cajanus ca... 72 2e-12
KYP76251.1 Putative ribonuclease H protein At1g65750 [Cajanus ca... 68 2e-12
KYP35215.1 Putative ribonuclease H protein At1g65750 family, par... 69 3e-12
KYP63365.1 Putative ribonuclease H protein At1g65750 family [Caj... 69 3e-12
GAU10638.1 hypothetical protein TSUD_421140, partial [Trifolium ... 70 4e-12
XP_015385965.1 PREDICTED: uncharacterized protein LOC107177137 [... 69 4e-12
AAD21515.1 putative reverse transcriptase [Arabidopsis thaliana]... 71 4e-12
ABK28199.1 unknown, partial [Arabidopsis thaliana] 71 4e-12
>GAU20014.1 hypothetical protein TSUD_273490 [Trifolium subterraneum]
Length = 159
Score = 90.1 bits (222), Expect = 2e-20
Identities = 45/92 (48%), Positives = 60/92 (65%)
Frame = -3
Query: 359 LGTCSVLMAELWGILTSLAWSWHGLMAVDSLLIMESDSLVAVQLIIGSCPQTHPCFRLVS 180
LG+C+VLMAELWGILT+L W SL ESDS + V LI CP +HP +VS
Sbjct: 46 LGSCTVLMAELWGILTTLQMVWDKGYRYVSL---ESDSAIVVSLINKGCPPSHPYVSIVS 102
Query: 179 QIHQFLGRQWRVAFHHIFRESNQVADWLAGFA 84
I++ + W+V HI+R++NQVADW+A +A
Sbjct: 103 LINRLKMKDWQVQISHIYRQANQVADWIANYA 134
>KYP59205.1 Putative ribonuclease H protein At1g65750 family, partial [Cajanus
cajan]
Length = 85
Score = 80.9 bits (198), Expect = 9e-18
Identities = 39/91 (42%), Positives = 55/91 (60%), Gaps = 5/91 (5%)
Frame = -3
Query: 350 CSVLMAELWGILTSLAWSWHGLM-----AVDSLLIMESDSLVAVQLIIGSCPQTHPCFRL 186
CS++ +ELW I WHGL ++ ++E+DS +AV+LI+ CP THPC+ L
Sbjct: 1 CSIIQSELWAI-------WHGLRLLQYKGINRRALLETDSSMAVKLILEGCPTTHPCYNL 53
Query: 185 VSQIHQFLGRQWRVAFHHIFRESNQVADWLA 93
V QI LG + ++ HIFRE+N AD LA
Sbjct: 54 VQQIISLLGHEMSISISHIFREANSTADCLA 84
>KYP33915.1 Putative ribonuclease H protein At1g65750 family, partial [Cajanus
cajan]
Length = 148
Score = 79.0 bits (193), Expect = 3e-16
Identities = 42/100 (42%), Positives = 59/100 (59%), Gaps = 5/100 (5%)
Frame = -3
Query: 359 LGTCSVLMAELWGILTSLAWSWHGLMAV-----DSLLIMESDSLVAVQLIIGSCPQTHPC 195
LGTC+V+ AELW I +HGL + S +I+ESDS +AV+ + CPQ HPC
Sbjct: 44 LGTCTVVQAELWAI-------YHGLRLIKDKFISSHIIIESDSAIAVKFLNEGCPQAHPC 96
Query: 194 FRLVSQIHQFLGRQWRVAFHHIFRESNQVADWLAGFAHSV 75
+ LV+ I + LG +++ H RE+NQVAD A S+
Sbjct: 97 YALVNHIVRMLGDFYKIECIHTLREANQVADGFAKIGFSI 136
>GAU42896.1 hypothetical protein TSUD_232070 [Trifolium subterraneum]
Length = 106
Score = 66.2 bits (160), Expect(2) = 2e-14
Identities = 26/66 (39%), Positives = 45/66 (68%)
Frame = -3
Query: 266 LIMESDSLVAVQLIIGSCPQTHPCFRLVSQIHQFLGRQWRVAFHHIFRESNQVADWLAGF 87
++ ESDS +AV LI+ CP+ H C +++ I++ + W V+F H +R+ NQVA+W+A +
Sbjct: 7 VMFESDSAIAVDLILKGCPRNHSCEAIITCINRLKTQDWEVSFQHTYRQVNQVANWIASY 66
Query: 86 AHSVSM 69
A ++ M
Sbjct: 67 ALTIPM 72
Score = 40.0 bits (92), Expect(2) = 2e-14
Identities = 16/28 (57%), Positives = 18/28 (64%)
Frame = -2
Query: 84 PFGLHVFRSPPTGCISLLWHDYACTWFS 1
P G+H+ PP GCISLLW D A FS
Sbjct: 71 PMGIHILHIPPPGCISLLWQDNAGVCFS 98
>KHN04118.1 Putative ribonuclease H protein [Glycine soja]
Length = 128
Score = 71.2 bits (173), Expect = 2e-13
Identities = 39/92 (42%), Positives = 54/92 (58%), Gaps = 3/92 (3%)
Frame = -3
Query: 359 LGTCSVLMAELWGILTSLAWSWHGLMAVD---SLLIMESDSLVAVQLIIGSCPQTHPCFR 189
+G C+ L AELWGIL L +A D + +++ESDS +A++LI CP H +
Sbjct: 35 IGNCNFLRAELWGILKGLT------IARDRGFNYIVVESDSKIAIKLITYGCPTIHSNYN 88
Query: 188 LVSQIHQFLGRQWRVAFHHIFRESNQVADWLA 93
LV QI + + + V F HIFRE+NQ D LA
Sbjct: 89 LVQQIKEIVDSRLEVTFSHIFREANQTTDALA 120
>KYP39537.1 Putative ribonuclease H protein At1g65750 family [Cajanus cajan]
Length = 189
Score = 72.4 bits (176), Expect = 2e-13
Identities = 41/94 (43%), Positives = 56/94 (59%), Gaps = 5/94 (5%)
Frame = -3
Query: 359 LGTCSVLMAELWGILTSLAWSWHGLMAVDSL-----LIMESDSLVAVQLIIGSCPQTHPC 195
LGTCSV+ AELW I +HGL ++ +I+ESDS +AV+ + C + +PC
Sbjct: 66 LGTCSVVQAELWAI-------FHGLRIINERGISDPIIIESDSALAVKFLNEGCSRENPC 118
Query: 194 FRLVSQIHQFLGRQWRVAFHHIFRESNQVADWLA 93
+ LV+ I G V +HIFRE+NQVAD LA
Sbjct: 119 YSLVNLIVNMTGNNLDVKCNHIFREANQVADCLA 152
>GAU42897.1 hypothetical protein TSUD_232080 [Trifolium subterraneum]
Length = 103
Score = 67.4 bits (163), Expect(2) = 2e-13
Identities = 26/64 (40%), Positives = 45/64 (70%)
Frame = -3
Query: 266 LIMESDSLVAVQLIIGSCPQTHPCFRLVSQIHQFLGRQWRVAFHHIFRESNQVADWLAGF 87
++ ESDS +AV LI+ CP+ HPC +++ I++ + W V+F H +R+ NQVA+W+A +
Sbjct: 7 VMFESDSAIAVDLILKGCPRNHPCEAIITCINRLKMQDWEVSFQHTYRQVNQVANWIASY 66
Query: 86 AHSV 75
A ++
Sbjct: 67 ALTI 70
Score = 35.0 bits (79), Expect(2) = 2e-13
Identities = 15/28 (53%), Positives = 17/28 (60%)
Frame = -2
Query: 84 PFGLHVFRSPPTGCISLLWHDYACTWFS 1
P G+H+ PP CISLLW D A FS
Sbjct: 71 PTGIHILHIPPPCCISLLWQDSAGVPFS 98
>KYP49773.1 Putative ribonuclease H protein At1g65750 family, partial [Cajanus
cajan]
Length = 118
Score = 69.7 bits (169), Expect = 5e-13
Identities = 36/87 (41%), Positives = 50/87 (57%), Gaps = 5/87 (5%)
Frame = -3
Query: 332 ELWGILTSLAWSWHGL-----MAVDSLLIMESDSLVAVQLIIGSCPQTHPCFRLVSQIHQ 168
ELW I WHGL +++ +++E+DS + V+LI+ CP THPC+ LV QI
Sbjct: 4 ELWAI-------WHGLHLIQYRGINNNVLLETDSFMVVKLILEGCPTTHPCYNLVQQIIS 56
Query: 167 FLGRQWRVAFHHIFRESNQVADWLAGF 87
G ++ HIFRE N VAD LA +
Sbjct: 57 LSGHVMSISISHIFREVNIVADCLAKY 83
>KYP59936.1 Putative ribonuclease H protein At1g65750 family [Cajanus cajan]
Length = 116
Score = 69.3 bits (168), Expect = 7e-13
Identities = 37/89 (41%), Positives = 50/89 (56%)
Frame = -3
Query: 338 MAELWGILTSLAWSWHGLMAVDSLLIMESDSLVAVQLIIGSCPQTHPCFRLVSQIHQFLG 159
MAELW I + +W+ + L++ESDSL+AV L+ C HPCF LV I F+
Sbjct: 1 MAELWAIYIGITTAWNRGF---TKLVVESDSLLAVGLLQNGCSSCHPCFSLVQSILSFVA 57
Query: 158 RQWRVAFHHIFRESNQVADWLAGFAHSVS 72
HI RE+NQVAD LA + S++
Sbjct: 58 AGGDFECRHILREANQVADGLANYGRSLT 86
>GAU19717.1 hypothetical protein TSUD_78420 [Trifolium subterraneum]
Length = 152
Score = 70.1 bits (170), Expect = 8e-13
Identities = 38/103 (36%), Positives = 55/103 (53%)
Frame = -3
Query: 359 LGTCSVLMAELWGILTSLAWSWHGLMAVDSLLIMESDSLVAVQLIIGSCPQTHPCFRLVS 180
+G C L AE+WG+ T + + + +I+ESDS + + ++ GSC LV
Sbjct: 25 IGACDALHAEMWGMYTGMQMARRQGF---THIIVESDSKLLIDMVTGSCKLNGKTPILVR 81
Query: 179 QIHQFLGRQWRVAFHHIFRESNQVADWLAGFAHSVSMCFVRLL 51
+I F QW + F H +RE N+ ADWLA F+ S S VR L
Sbjct: 82 RIRDFANLQWHITFKHTWREGNRCADWLANFSLSQSSFDVRNL 124
>KYP49751.1 Putative ribonuclease H protein At1g65750 family, partial [Cajanus
cajan]
Length = 168
Score = 70.1 bits (170), Expect = 1e-12
Identities = 42/99 (42%), Positives = 56/99 (56%), Gaps = 4/99 (4%)
Frame = -3
Query: 359 LGTCSVLMAELWGILTSLAW----SWHGLMAVDSLLIMESDSLVAVQLIIGSCPQTHPCF 192
LG CSV+ AELW I + SW G + V E+DS VAV+ + C +TH +
Sbjct: 45 LGKCSVVRAELWAIFYGIKLLRERSWDGAIWV------ETDSAVAVKFLNQGCIRTHDSY 98
Query: 191 RLVSQIHQFLGRQWRVAFHHIFRESNQVADWLAGFAHSV 75
LV++I +G V+ HIFRE+NQVAD LA HS+
Sbjct: 99 SLVNKIVPIVGDDHEVSCSHIFREANQVADLLAKHGHSL 137
>KYP52376.1 Putative ribonuclease H protein At1g65750 family, partial [Cajanus
cajan]
Length = 178
Score = 70.1 bits (170), Expect = 1e-12
Identities = 42/99 (42%), Positives = 56/99 (56%), Gaps = 4/99 (4%)
Frame = -3
Query: 359 LGTCSVLMAELWGILTSLAW----SWHGLMAVDSLLIMESDSLVAVQLIIGSCPQTHPCF 192
LG CSV+ AELW I + SW G + V E+DS VAV+ + C +TH +
Sbjct: 55 LGKCSVVRAELWAIFYGIKLLRERSWDGAIWV------ETDSAVAVKFLNQGCIRTHDSY 108
Query: 191 RLVSQIHQFLGRQWRVAFHHIFRESNQVADWLAGFAHSV 75
LV++I +G V+ HIFRE+NQVAD LA HS+
Sbjct: 109 SLVNKIVPIVGDDHEVSCSHIFREANQVADLLAKHGHSL 147
>KYP30980.1 Retrovirus-related Pol polyprotein LINE-1 [Cajanus cajan]
Length = 565
Score = 72.4 bits (176), Expect = 2e-12
Identities = 41/101 (40%), Positives = 57/101 (56%), Gaps = 5/101 (4%)
Frame = -3
Query: 359 LGTCSVLMAELWGILTSLAWSWHGLMAVDSL-----LIMESDSLVAVQLIIGSCPQTHPC 195
+GTCSVL AELW I +HGL + + ++ESDS +AV+L+ C + HPC
Sbjct: 442 IGTCSVLQAELWAI-------FHGLRIIKEMNLKGNFLIESDSEIAVKLLNEGCSREHPC 494
Query: 194 FRLVSQIHQFLGRQWRVAFHHIFRESNQVADWLAGFAHSVS 72
+ LV+ I + G + HI RE+NQVAD A S+S
Sbjct: 495 YSLVNHIVRVAGEIQNLECSHILREANQVADRFAKHGFSLS 535
>KYP76251.1 Putative ribonuclease H protein At1g65750 [Cajanus cajan]
Length = 125
Score = 68.2 bits (165), Expect = 2e-12
Identities = 40/102 (39%), Positives = 57/102 (55%), Gaps = 3/102 (2%)
Frame = -3
Query: 359 LGTCSVLMAELWGILTSLAWSWHGLMAVDSLLIMESDSLVAVQLIIGSCPQTHPCFRLVS 180
+G CSV+ AELW I L + VD +I+ESDS +AV+ + C + HP + LV+
Sbjct: 2 IGVCSVVQAELWAIFHGLRLLKERSLVVD--IIIESDSALAVKFLNEGCSREHPYYSLVN 59
Query: 179 QIHQFLGRQWRVAFHHIFRESNQVADWLAGFAHSVS---MCF 63
I + G + H+ RE+NQVAD A F S+S +CF
Sbjct: 60 HIVRMAGDFPSIDCTHVLREANQVADGFAKFGLSISEGMLCF 101
>KYP35215.1 Putative ribonuclease H protein At1g65750 family, partial [Cajanus
cajan] KYP35220.1 Putative ribonuclease H protein
At1g65750 family, partial [Cajanus cajan]
Length = 170
Score = 68.9 bits (167), Expect = 3e-12
Identities = 40/94 (42%), Positives = 55/94 (58%), Gaps = 5/94 (5%)
Frame = -3
Query: 359 LGTCSVLMAELWGILTSLAWSWHGLMAVDSL-----LIMESDSLVAVQLIIGSCPQTHPC 195
LGTCSV+ AELW I +HGL ++ +I+ESDS +AV+ + C + +PC
Sbjct: 47 LGTCSVVQAELWAI-------FHGLQIINEKGIFDPIIIESDSALAVKFLNEGCSRENPC 99
Query: 194 FRLVSQIHQFLGRQWRVAFHHIFRESNQVADWLA 93
+ LV+ I G V +HIF E+NQVAD LA
Sbjct: 100 YSLVNLIVNMTGDNLAVDCNHIFCEANQVADCLA 133
>KYP63365.1 Putative ribonuclease H protein At1g65750 family [Cajanus cajan]
Length = 171
Score = 68.9 bits (167), Expect = 3e-12
Identities = 37/94 (39%), Positives = 56/94 (59%), Gaps = 5/94 (5%)
Frame = -3
Query: 359 LGTCSVLMAELWGILTSLAWSWHGLMAVDS-----LLIMESDSLVAVQLIIGSCPQTHPC 195
LG+CS+ AE+W IL HGL + + +++E+DSL ++ LI C +HP
Sbjct: 51 LGSCSITNAEIWAIL-------HGLRIIRNNNLLGRILVETDSLTSINLISHGCDPSHPS 103
Query: 194 FRLVSQIHQFLGRQWRVAFHHIFRESNQVADWLA 93
F LV +I + V+++HIFRE+N+VAD LA
Sbjct: 104 FNLVKEIQDLSNQLQVVSYNHIFREANKVADALA 137
>GAU10638.1 hypothetical protein TSUD_421140, partial [Trifolium subterraneum]
Length = 236
Score = 70.1 bits (170), Expect = 4e-12
Identities = 38/103 (36%), Positives = 55/103 (53%)
Frame = -3
Query: 359 LGTCSVLMAELWGILTSLAWSWHGLMAVDSLLIMESDSLVAVQLIIGSCPQTHPCFRLVS 180
+G C L AE+WG+ T + + + +I+ESDS + + ++ GSC LV
Sbjct: 109 IGACDALHAEMWGMYTGMQMARRQGF---THIIVESDSKLLIDMVTGSCKLNGKTPILVR 165
Query: 179 QIHQFLGRQWRVAFHHIFRESNQVADWLAGFAHSVSMCFVRLL 51
+I F QW + F H +RE N+ ADWLA F+ S S VR L
Sbjct: 166 RIRDFANLQWHITFKHTWREGNRCADWLANFSLSQSSFDVRNL 208
>XP_015385965.1 PREDICTED: uncharacterized protein LOC107177137 [Citrus sinensis]
Length = 1277
Score = 69.3 bits (168), Expect(2) = 4e-12
Identities = 36/94 (38%), Positives = 53/94 (56%)
Frame = -3
Query: 359 LGTCSVLMAELWGILTSLAWSWHGLMAVDSLLIMESDSLVAVQLIIGSCPQTHPCFRLVS 180
+G SVLMAELWG+ L +W A L++E D+L QL+ + + LV
Sbjct: 1153 IGESSVLMAELWGLYQGLRLTWE---AGIKRLLVEVDNLCVTQLVSKQVVVPNEFYALVV 1209
Query: 179 QIHQFLGRQWRVAFHHIFRESNQVADWLAGFAHS 78
I + + R W+V+ HI+RE+N AD++A AHS
Sbjct: 1210 AIRELISRNWQVSITHIYREANSAADFMANMAHS 1243
Score = 28.9 bits (63), Expect(2) = 4e-12
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -2
Query: 84 PFGLHVFRSPPTGCISLLWHD 22
P GLH+F SPP G S++ D
Sbjct: 1245 PHGLHLFSSPPVGIYSIIVQD 1265
>AAD21515.1 putative reverse transcriptase [Arabidopsis thaliana] AAM15081.1
putative reverse transcriptase [Arabidopsis thaliana]
Length = 314
Score = 70.9 bits (172), Expect = 4e-12
Identities = 38/104 (36%), Positives = 57/104 (54%)
Frame = -3
Query: 359 LGTCSVLMAELWGILTSLAWSWHGLMAVDSLLIMESDSLVAVQLIIGSCPQTHPCFRLVS 180
+G CS +AELWG+ L +W + + L +E DS + V + + HP LV
Sbjct: 190 IGVCSAPLAELWGVYYGLYIAWERRV---TRLEIEVDSEIVVGFLKIGINEVHPLSFLVR 246
Query: 179 QIHQFLGRQWRVAFHHIFRESNQVADWLAGFAHSVSMCFVRLLL 48
H F+ R WRV H++RE+N++AD LA +A S+ + F L L
Sbjct: 247 LCHDFISRDWRVRISHVYREANRLADGLANYAFSLPLGFHSLSL 290
>ABK28199.1 unknown, partial [Arabidopsis thaliana]
Length = 315
Score = 70.9 bits (172), Expect = 4e-12
Identities = 38/104 (36%), Positives = 57/104 (54%)
Frame = -3
Query: 359 LGTCSVLMAELWGILTSLAWSWHGLMAVDSLLIMESDSLVAVQLIIGSCPQTHPCFRLVS 180
+G CS +AELWG+ L +W + + L +E DS + V + + HP LV
Sbjct: 190 IGVCSAPLAELWGVYYGLYIAWERRV---TRLEIEVDSEIVVGFLKIGINEVHPLSFLVR 246
Query: 179 QIHQFLGRQWRVAFHHIFRESNQVADWLAGFAHSVSMCFVRLLL 48
H F+ R WRV H++RE+N++AD LA +A S+ + F L L
Sbjct: 247 LCHDFISRDWRVRISHVYREANRLADGLANYAFSLPLGFHSLSL 290