BLASTX nr result
ID: Glycyrrhiza36_contig00027979
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza36_contig00027979
(295 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAX19931.1 viral replicase [Nandina mosaic virus] 148 2e-39
BAG12153.1 RNA-dependent RNA polymerase [Plantago asiatica mosai... 147 4e-39
BAG12148.1 RNA-dependent RNA polymerase [Plantago asiatica mosai... 147 4e-39
BAG12143.1 RNA-dependent RNA polymerase [Plantago asiatica mosai... 147 4e-39
BAG12138.1 RNA-dependent RNA polymerase [Plantago asiatica mosai... 147 4e-39
BAG12133.1 RNA-dependent RNA polymerase [Plantago asiatica mosai... 147 4e-39
BAG12128.1 RNA-dependent RNA polymerase [Plantago asiatica mosai... 147 4e-39
BAG12123.1 RNA-dependent RNA polymerase [Plantago asiatica mosai... 147 4e-39
AMN10083.1 RNA-dependent RNA polymerase [Plantago asiatica mosai... 147 4e-39
CEN56830.1 RNA-dependent RNA polymerase [Plantago asiatica mosai... 145 1e-38
AGW45389.1 RNA-dependent RNA polymerase, partial [Plantago asiat... 144 3e-38
NP_620836.1 replicase [Plantago asiatica mosaic virus] Q07518.1 ... 144 4e-38
ANY93292.1 RdRp [Plantago asiatica mosaic virus] 144 5e-38
AMY62723.1 RNA-dependent RNA polymerase [Plantago asiatica mosai... 144 5e-38
AMY62718.1 RNA-dependent RNA polymerase [Plantago asiatica mosai... 144 5e-38
AMY62703.1 RNA-dependent RNA polymerase [Plantago asiatica mosai... 144 5e-38
AMD78101.1 RdRP [Plantago asiatica mosaic virus] 144 5e-38
AMY62713.1 RNA-dependent RNA polymerase [Plantago asiatica mosai... 140 8e-37
NP_702988.1 RNA-dependent RNA polymerase [Tulip virus X] BAC1678... 132 1e-33
AAW30634.1 replicase, partial [Tulip virus X] 109 9e-29
>AAX19931.1 viral replicase [Nandina mosaic virus]
Length = 1368
Score = 148 bits (374), Expect = 2e-39
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = -3
Query: 230 MSNVRNVFSQLTDPSLKAVIQDEAYRTLKRELAQTRHSNPFAQTPEAADALEALGINSHP 51
MSNVRNVFSQLTDPSLKAVIQDEAYRTLKRELAQTRH+NPFAQ+P+AADALEALGINSHP
Sbjct: 1 MSNVRNVFSQLTDPSLKAVIQDEAYRTLKRELAQTRHTNPFAQSPDAADALEALGINSHP 60
Query: 50 YAITPHTHAAAKAIES 3
YAITPHTHAAAKAIES
Sbjct: 61 YAITPHTHAAAKAIES 76
>BAG12153.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 147 bits (371), Expect = 4e-39
Identities = 73/76 (96%), Positives = 75/76 (98%)
Frame = -3
Query: 230 MSNVRNVFSQLTDPSLKAVIQDEAYRTLKRELAQTRHSNPFAQTPEAADALEALGINSHP 51
MSNVRNVF+QLTDPSLKAVIQDEAYR LKRELAQTRH+NPFAQTPEAADALEALGINSHP
Sbjct: 1 MSNVRNVFAQLTDPSLKAVIQDEAYRHLKRELAQTRHNNPFAQTPEAADALEALGINSHP 60
Query: 50 YAITPHTHAAAKAIES 3
YAITPHTHAAAKAIES
Sbjct: 61 YAITPHTHAAAKAIES 76
>BAG12148.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 147 bits (371), Expect = 4e-39
Identities = 73/76 (96%), Positives = 75/76 (98%)
Frame = -3
Query: 230 MSNVRNVFSQLTDPSLKAVIQDEAYRTLKRELAQTRHSNPFAQTPEAADALEALGINSHP 51
MSNVRNVF+QLTDPSLKAVIQDEAYR LKRELAQTRH+NPFAQTPEAADALEALGINSHP
Sbjct: 1 MSNVRNVFAQLTDPSLKAVIQDEAYRHLKRELAQTRHNNPFAQTPEAADALEALGINSHP 60
Query: 50 YAITPHTHAAAKAIES 3
YAITPHTHAAAKAIES
Sbjct: 61 YAITPHTHAAAKAIES 76
>BAG12143.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 147 bits (371), Expect = 4e-39
Identities = 73/76 (96%), Positives = 75/76 (98%)
Frame = -3
Query: 230 MSNVRNVFSQLTDPSLKAVIQDEAYRTLKRELAQTRHSNPFAQTPEAADALEALGINSHP 51
MSNVRNVF+QLTDPSLKAVIQDEAYR LKRELAQTRH+NPFAQTPEAADALEALGINSHP
Sbjct: 1 MSNVRNVFAQLTDPSLKAVIQDEAYRHLKRELAQTRHNNPFAQTPEAADALEALGINSHP 60
Query: 50 YAITPHTHAAAKAIES 3
YAITPHTHAAAKAIES
Sbjct: 61 YAITPHTHAAAKAIES 76
>BAG12138.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 147 bits (371), Expect = 4e-39
Identities = 73/76 (96%), Positives = 75/76 (98%)
Frame = -3
Query: 230 MSNVRNVFSQLTDPSLKAVIQDEAYRTLKRELAQTRHSNPFAQTPEAADALEALGINSHP 51
MSNVRNVF+QLTDPSLKAVIQDEAYR LKRELAQTRH+NPFAQTPEAADALEALGINSHP
Sbjct: 1 MSNVRNVFAQLTDPSLKAVIQDEAYRHLKRELAQTRHNNPFAQTPEAADALEALGINSHP 60
Query: 50 YAITPHTHAAAKAIES 3
YAITPHTHAAAKAIES
Sbjct: 61 YAITPHTHAAAKAIES 76
>BAG12133.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 147 bits (371), Expect = 4e-39
Identities = 73/76 (96%), Positives = 75/76 (98%)
Frame = -3
Query: 230 MSNVRNVFSQLTDPSLKAVIQDEAYRTLKRELAQTRHSNPFAQTPEAADALEALGINSHP 51
MSNVRNVF+QLTDPSLKAVIQDEAYR LKRELAQTRH+NPFAQTPEAADALEALGINSHP
Sbjct: 1 MSNVRNVFAQLTDPSLKAVIQDEAYRHLKRELAQTRHNNPFAQTPEAADALEALGINSHP 60
Query: 50 YAITPHTHAAAKAIES 3
YAITPHTHAAAKAIES
Sbjct: 61 YAITPHTHAAAKAIES 76
>BAG12128.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 147 bits (371), Expect = 4e-39
Identities = 73/76 (96%), Positives = 75/76 (98%)
Frame = -3
Query: 230 MSNVRNVFSQLTDPSLKAVIQDEAYRTLKRELAQTRHSNPFAQTPEAADALEALGINSHP 51
MSNVRNVF+QLTDPSLKAVIQDEAYR LKRELAQTRH+NPFAQTPEAADALEALGINSHP
Sbjct: 1 MSNVRNVFAQLTDPSLKAVIQDEAYRHLKRELAQTRHNNPFAQTPEAADALEALGINSHP 60
Query: 50 YAITPHTHAAAKAIES 3
YAITPHTHAAAKAIES
Sbjct: 61 YAITPHTHAAAKAIES 76
>BAG12123.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 147 bits (371), Expect = 4e-39
Identities = 73/76 (96%), Positives = 75/76 (98%)
Frame = -3
Query: 230 MSNVRNVFSQLTDPSLKAVIQDEAYRTLKRELAQTRHSNPFAQTPEAADALEALGINSHP 51
MSNVRNVF+QLTDPSLKAVIQDEAYR LKRELAQTRH+NPFAQTPEAADALEALGINSHP
Sbjct: 1 MSNVRNVFAQLTDPSLKAVIQDEAYRHLKRELAQTRHNNPFAQTPEAADALEALGINSHP 60
Query: 50 YAITPHTHAAAKAIES 3
YAITPHTHAAAKAIES
Sbjct: 61 YAITPHTHAAAKAIES 76
>AMN10083.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1387
Score = 147 bits (371), Expect = 4e-39
Identities = 72/76 (94%), Positives = 75/76 (98%)
Frame = -3
Query: 230 MSNVRNVFSQLTDPSLKAVIQDEAYRTLKRELAQTRHSNPFAQTPEAADALEALGINSHP 51
MSNVRNVFSQLTDPSLKAVIQDEAYR LKRELAQTRH+NPFAQ+PEAADALEALGINSHP
Sbjct: 1 MSNVRNVFSQLTDPSLKAVIQDEAYRVLKRELAQTRHTNPFAQSPEAADALEALGINSHP 60
Query: 50 YAITPHTHAAAKAIES 3
YAITPHTHAAAKA+ES
Sbjct: 61 YAITPHTHAAAKAVES 76
>CEN56830.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 145 bits (367), Expect = 1e-38
Identities = 72/76 (94%), Positives = 75/76 (98%)
Frame = -3
Query: 230 MSNVRNVFSQLTDPSLKAVIQDEAYRTLKRELAQTRHSNPFAQTPEAADALEALGINSHP 51
MSNVRNVF+QLTDPSLKAVIQDEAYR LKRELAQTRH+NPFAQ+PEAADALEALGINSHP
Sbjct: 1 MSNVRNVFAQLTDPSLKAVIQDEAYRHLKRELAQTRHNNPFAQSPEAADALEALGINSHP 60
Query: 50 YAITPHTHAAAKAIES 3
YAITPHTHAAAKAIES
Sbjct: 61 YAITPHTHAAAKAIES 76
>AGW45389.1 RNA-dependent RNA polymerase, partial [Plantago asiatica mosaic
virus]
Length = 669
Score = 144 bits (363), Expect = 3e-38
Identities = 71/76 (93%), Positives = 74/76 (97%)
Frame = -3
Query: 230 MSNVRNVFSQLTDPSLKAVIQDEAYRTLKRELAQTRHSNPFAQTPEAADALEALGINSHP 51
MSNVRNVF+QLTDPSLKAVIQDEAYR LKRELAQTRH+NPFAQ+PEAADALE LGINSHP
Sbjct: 1 MSNVRNVFAQLTDPSLKAVIQDEAYRHLKRELAQTRHNNPFAQSPEAADALEVLGINSHP 60
Query: 50 YAITPHTHAAAKAIES 3
YAITPHTHAAAKAIES
Sbjct: 61 YAITPHTHAAAKAIES 76
>NP_620836.1 replicase [Plantago asiatica mosaic virus] Q07518.1 RecName:
Full=RNA replication protein; AltName: Full=156 kDa
protein; AltName: Full=ORF1 protein; Includes: RecName:
Full=RNA-directed RNA polymerase; Includes: RecName:
Full=Helicase CAA79761.1 156K-protein [Plantago asiatica
mosaic virus]
Length = 1385
Score = 144 bits (364), Expect = 4e-38
Identities = 72/76 (94%), Positives = 74/76 (97%)
Frame = -3
Query: 230 MSNVRNVFSQLTDPSLKAVIQDEAYRTLKRELAQTRHSNPFAQTPEAADALEALGINSHP 51
MSNVRNVFSQLTDPSLKAVIQDEAYR LKRELAQTRH+NPFAQ+PEAADALEALGINSHP
Sbjct: 1 MSNVRNVFSQLTDPSLKAVIQDEAYRVLKRELAQTRHTNPFAQSPEAADALEALGINSHP 60
Query: 50 YAITPHTHAAAKAIES 3
YAIT HTHAAAKAIES
Sbjct: 61 YAITSHTHAAAKAIES 76
>ANY93292.1 RdRp [Plantago asiatica mosaic virus]
Length = 1380
Score = 144 bits (363), Expect = 5e-38
Identities = 71/76 (93%), Positives = 74/76 (97%)
Frame = -3
Query: 230 MSNVRNVFSQLTDPSLKAVIQDEAYRTLKRELAQTRHSNPFAQTPEAADALEALGINSHP 51
MSNVRNVF+QLTDPSLKAVIQDEAYR LKRELAQTRH+NPFAQ+PEAADALE LGINSHP
Sbjct: 1 MSNVRNVFAQLTDPSLKAVIQDEAYRHLKRELAQTRHNNPFAQSPEAADALEVLGINSHP 60
Query: 50 YAITPHTHAAAKAIES 3
YAITPHTHAAAKAIES
Sbjct: 61 YAITPHTHAAAKAIES 76
>AMY62723.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 144 bits (363), Expect = 5e-38
Identities = 71/76 (93%), Positives = 74/76 (97%)
Frame = -3
Query: 230 MSNVRNVFSQLTDPSLKAVIQDEAYRTLKRELAQTRHSNPFAQTPEAADALEALGINSHP 51
MSNVRNVF+QLTDPSLKAVIQDEAYR LKRELAQTRH+NPFAQ+PEAADALE LGINSHP
Sbjct: 1 MSNVRNVFAQLTDPSLKAVIQDEAYRHLKRELAQTRHNNPFAQSPEAADALEVLGINSHP 60
Query: 50 YAITPHTHAAAKAIES 3
YAITPHTHAAAKAIES
Sbjct: 61 YAITPHTHAAAKAIES 76
>AMY62718.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 144 bits (363), Expect = 5e-38
Identities = 71/76 (93%), Positives = 74/76 (97%)
Frame = -3
Query: 230 MSNVRNVFSQLTDPSLKAVIQDEAYRTLKRELAQTRHSNPFAQTPEAADALEALGINSHP 51
MSNVRNVF+QLTDPSLKAVIQDEAYR LKRELAQTRH+NPFAQ+PEAADALE LGINSHP
Sbjct: 1 MSNVRNVFAQLTDPSLKAVIQDEAYRHLKRELAQTRHNNPFAQSPEAADALEVLGINSHP 60
Query: 50 YAITPHTHAAAKAIES 3
YAITPHTHAAAKAIES
Sbjct: 61 YAITPHTHAAAKAIES 76
>AMY62703.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
AMY62708.1 RNA-dependent RNA polymerase [Plantago
asiatica mosaic virus]
Length = 1380
Score = 144 bits (363), Expect = 5e-38
Identities = 71/76 (93%), Positives = 74/76 (97%)
Frame = -3
Query: 230 MSNVRNVFSQLTDPSLKAVIQDEAYRTLKRELAQTRHSNPFAQTPEAADALEALGINSHP 51
MSNVRNVF+QLTDPSLKAVIQDEAYR LKRELAQTRH+NPFAQ+PEAADALE LGINSHP
Sbjct: 1 MSNVRNVFAQLTDPSLKAVIQDEAYRHLKRELAQTRHNNPFAQSPEAADALEVLGINSHP 60
Query: 50 YAITPHTHAAAKAIES 3
YAITPHTHAAAKAIES
Sbjct: 61 YAITPHTHAAAKAIES 76
>AMD78101.1 RdRP [Plantago asiatica mosaic virus]
Length = 1380
Score = 144 bits (363), Expect = 5e-38
Identities = 71/76 (93%), Positives = 74/76 (97%)
Frame = -3
Query: 230 MSNVRNVFSQLTDPSLKAVIQDEAYRTLKRELAQTRHSNPFAQTPEAADALEALGINSHP 51
MSNVRNVF+QLTDPSLKAVIQDEAYR LKRELAQTRH+NPFAQ+PEAADALE LGINSHP
Sbjct: 1 MSNVRNVFAQLTDPSLKAVIQDEAYRHLKRELAQTRHNNPFAQSPEAADALEVLGINSHP 60
Query: 50 YAITPHTHAAAKAIES 3
YAITPHTHAAAKAIES
Sbjct: 61 YAITPHTHAAAKAIES 76
>AMY62713.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 140 bits (354), Expect = 8e-37
Identities = 70/76 (92%), Positives = 73/76 (96%)
Frame = -3
Query: 230 MSNVRNVFSQLTDPSLKAVIQDEAYRTLKRELAQTRHSNPFAQTPEAADALEALGINSHP 51
MSNVRNVF+QLTDPSLKAVIQDEAYR LKRELAQTRH+NPFAQ+PEAADALE LGINS P
Sbjct: 1 MSNVRNVFAQLTDPSLKAVIQDEAYRHLKRELAQTRHNNPFAQSPEAADALEVLGINSXP 60
Query: 50 YAITPHTHAAAKAIES 3
YAITPHTHAAAKAIES
Sbjct: 61 YAITPHTHAAAKAIES 76
>NP_702988.1 RNA-dependent RNA polymerase [Tulip virus X] BAC16785.1
RNA-dependent RNA polymerase [Tulip virus X]
Length = 1361
Score = 132 bits (331), Expect = 1e-33
Identities = 64/76 (84%), Positives = 69/76 (90%)
Frame = -3
Query: 230 MSNVRNVFSQLTDPSLKAVIQDEAYRTLKRELAQTRHSNPFAQTPEAADALEALGINSHP 51
MSN+RNVF+QLTDPSLKAVIQDEAYR +K+EL TRHSNPFAQ+P AAD LE LGINSHP
Sbjct: 1 MSNLRNVFAQLTDPSLKAVIQDEAYRVMKKELTATRHSNPFAQSPAAADTLELLGINSHP 60
Query: 50 YAITPHTHAAAKAIES 3
AITPHTHAAAKAIES
Sbjct: 61 LAITPHTHAAAKAIES 76
>AAW30634.1 replicase, partial [Tulip virus X]
Length = 144
Score = 109 bits (273), Expect = 9e-29
Identities = 53/63 (84%), Positives = 56/63 (88%)
Frame = -3
Query: 191 PSLKAVIQDEAYRTLKRELAQTRHSNPFAQTPEAADALEALGINSHPYAITPHTHAAAKA 12
PSLKAVIQDEAYR +K+EL TRHSNPFAQ+P AAD LE LGINSHP AITPHTHAAAKA
Sbjct: 2 PSLKAVIQDEAYRVMKKELTATRHSNPFAQSPAAADTLELLGINSHPLAITPHTHAAAKA 61
Query: 11 IES 3
IES
Sbjct: 62 IES 64