BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza36_contig00024484
         (401 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

OMP03432.1 Integrase, catalytic core [Corchorus capsularis]            61   3e-08
CAN63563.1 hypothetical protein VITISV_003097 [Vitis vinifera]         57   6e-07
AOZ57159.1 integrase, partial [Coccinia grandis]                       53   5e-06

>OMP03432.1 Integrase, catalytic core [Corchorus capsularis]
          Length = 1347

 Score = 61.2 bits (147), Expect = 3e-08
 Identities = 47/123 (38%), Positives = 62/123 (50%), Gaps = 8/123 (6%)
 Frame = -1

Query: 383 LWHMKPGHWSSINLRL*QKKTMLKELSQFGLWEQARDA-----KAQ*LPFEVPRFKL*GV 219
           LWH + GH S   L+   KK+MLK L Q  + E    A     +A  LP+E  +FK    
Sbjct: 473 LWHARLGHVSYFKLKAMMKKSMLKGLPQLDVKEDTVCAGCQYGRAHQLPYEESKFK---- 528

Query: 218 IGVSPLMYVWTSDGVCPLMFGRV---NLKGYHIYFMMTFIDDY*GYVEAFFMKEKSETLK 48
               PL  V +       +FG++   ++ GY   +M+TFIDDY  YV   FMKEKSE L 
Sbjct: 529 -AKMPLQLVHSD------VFGKMKQPSVSGYQ--YMITFIDDYSRYVWVDFMKEKSEALT 579

Query: 47  NLK 39
             K
Sbjct: 580 KFK 582


>CAN63563.1 hypothetical protein VITISV_003097 [Vitis vinifera]
          Length = 1052

 Score = 57.4 bits (137), Expect = 6e-07
 Identities = 48/133 (36%), Positives = 66/133 (49%), Gaps = 4/133 (3%)
 Frame = -1

Query: 395 NEIV-LWHMKPGHWSSINLRL*QKKTMLKELSQFGLWEQARDAKAQ*LPFEVPRFKL*GV 219
           NEI  LWHM+  H S   L +  KK+MLK L Q        + KA  L +E  ++K  G 
Sbjct: 354 NEIADLWHMRLSHVSYSKLTVMMKKSMLKGLPQL-------EGKAHQLSYEESKWKAKG- 405

Query: 218 IGVSPLMYVWTSDGVCPLMFGRVN---LKGYHIYFMMTFIDDY*GYVEAFFMKEKSETLK 48
               PL  + +       +FG V    L G  + +M+TFIDD+  YV  +FMKEKSET  
Sbjct: 406 ----PLELIHSD------VFGPVKQAXLSG--MKYMVTFIDDFSRYVWVYFMKEKSETFS 453

Query: 47  NLKYNNSRTILKI 9
             K     T +++
Sbjct: 454 KFKEFKEMTEIEV 466


>AOZ57159.1 integrase, partial [Coccinia grandis]
          Length = 166

 Score = 53.1 bits (126), Expect = 5e-06
 Identities = 42/121 (34%), Positives = 58/121 (47%), Gaps = 6/121 (4%)
 Frame = -1

Query: 383 LWHMKPGHWSSINLRL*QKKTMLKELSQFGLWEQ-----ARDAKAQ*LPFEVPRFKL*GV 219
           LWH + GH S   L+    K+MLK L Q  +         +  KA  LPF+  +F+    
Sbjct: 30  LWHARLGHVSYNKLKTMMNKSMLKGLPQLDVRXDMVCAGCQYGKAHQLPFKESKFR---- 85

Query: 218 IGVSPLMYVWTSDGVCPLMFGRVNLKGYH-IYFMMTFIDDY*GYVEAFFMKEKSETLKNL 42
               PL  V +       +FG V       + +M+TFIDD+  YV  FFMK+KSET+   
Sbjct: 86  -AKQPLELVHSD------VFGPVKQSSIGGMRYMVTFIDDFSRYVWVFFMKDKSETVIKF 138

Query: 41  K 39
           K
Sbjct: 139 K 139