BLASTX nr result

ID: Glycyrrhiza36_contig00024443 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza36_contig00024443
         (679 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_013461886.1 DEAD-box ATP-dependent RNA helicase-like protein ...    64   2e-08
OIV96488.1 hypothetical protein TanjilG_07880 [Lupinus angustifo...    63   6e-08
KHG04362.1 DEAD-box ATP-dependent RNA helicase 56 [Gossypium arb...    51   2e-06
XP_011459188.1 PREDICTED: DEAD-box ATP-dependent RNA helicase 56...    58   2e-06

>XP_013461886.1 DEAD-box ATP-dependent RNA helicase-like protein [Medicago
           truncatula] KEH35921.1 DEAD-box ATP-dependent RNA
           helicase-like protein [Medicago truncatula]
          Length = 314

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 32/42 (76%), Positives = 35/42 (83%), Gaps = 1/42 (2%)
 Frame = -1

Query: 679 SATLSKEIRPVCKKFMQDVMSHGQSYLL-EVSFILPTFLRAF 557
           SATLSKEIRPVCKKFMQDV+SHGQ YL+  + FILPTF   F
Sbjct: 229 SATLSKEIRPVCKKFMQDVISHGQYYLIRSLFFILPTFPEVF 270


>OIV96488.1 hypothetical protein TanjilG_07880 [Lupinus angustifolius]
          Length = 472

 Score = 62.8 bits (151), Expect = 6e-08
 Identities = 32/42 (76%), Positives = 35/42 (83%), Gaps = 1/42 (2%)
 Frame = -1

Query: 679 SATLSKEIRPVCKKFMQDVMSHGQSYL-LEVSFILPTFLRAF 557
           SATLSKEIRPVCKKFMQDVMSHGQ YL L+  FI+P F  +F
Sbjct: 236 SATLSKEIRPVCKKFMQDVMSHGQYYLNLKSLFIMPAFPESF 277


>KHG04362.1 DEAD-box ATP-dependent RNA helicase 56 [Gossypium arboreum]
          Length = 301

 Score = 51.2 bits (121), Expect(2) = 2e-06
 Identities = 27/43 (62%), Positives = 29/43 (67%)
 Frame = -2

Query: 153 LQGDKINGPEL*FKGSASIIDFVLDSISMRKAPNMIYCDIVPF 25
           LQG K +GPE   K  ASII FVLDSI +RK  NMIYC I  F
Sbjct: 3   LQGGKSDGPESQIKRCASIIHFVLDSIFLRKLANMIYCHICSF 45



 Score = 28.5 bits (62), Expect(2) = 2e-06
 Identities = 11/11 (100%), Positives = 11/11 (100%)
 Frame = -1

Query: 34 CSFQPMEIYVD 2
          CSFQPMEIYVD
Sbjct: 43 CSFQPMEIYVD 53


>XP_011459188.1 PREDICTED: DEAD-box ATP-dependent RNA helicase 56 isoform X2
           [Fragaria vesca subsp. vesca]
          Length = 462

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 32/42 (76%), Positives = 34/42 (80%), Gaps = 2/42 (4%)
 Frame = -1

Query: 679 SATLSKEIRPVCKKFMQDVMSHGQSYL-LEVSF-ILPTFLRA 560
           SATLSK+IRPVCKKFMQDVMSHGQ Y   EVSF I+P   RA
Sbjct: 228 SATLSKDIRPVCKKFMQDVMSHGQYYFNFEVSFSIIPLSTRA 269


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