BLASTX nr result
ID: Glycyrrhiza36_contig00024211
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza36_contig00024211
(231 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AMC32360.1 RNA polymerase beta'' subunit (chloroplast) [Glycyrrh... 152 4e-41
YP_009027274.1 RNA polymerase beta' subunit (chloroplast) [Glycy... 152 4e-41
YP_009334191.1 RpoC2 (chloroplast) [Caragana microphylla] APL973... 144 2e-38
AJE72230.1 RNA polymerase beta'' subunit (plastid) [Oxytropis la... 144 3e-38
CUR05062.1 rpoC2 (chloroplast) [Acacia obtecta] 142 1e-37
CUR05427.1 rpoC2 (chloroplast) [Acacia puncticulata] 142 1e-37
AHY33297.1 RNA polymerase beta' subunit (chloroplast) [Prosopis ... 142 1e-37
AMC32372.1 RNA polymerase beta'' subunit (chloroplast) [Senna ma... 142 1e-37
AJE72017.1 RNA polymerase beta'' subunit (plastid) [Chamaecrista... 142 1e-37
YP_009233395.1 RpoC2 (chloroplast) [Wisteria sinensis] AMB27275.... 142 1e-37
YP_009161290.1 RpoC2 (chloroplast) [Wisteria floribunda] AJC1003... 142 1e-37
CUR08503.1 rpoC2 (chloroplast) [Paraserianthes lophantha subsp. ... 142 1e-37
CUR08423.1 rpoC2 (chloroplast) [Pararchidendron pruinosum] 142 1e-37
ANY60342.1 RNA polymerase beta'' subunit (chloroplast) [Mezoneur... 141 2e-37
AHY32799.1 RNA polymerase beta' subunit (chloroplast) [Libidibia... 140 3e-37
YP_009193156.1 RNA polymerase beta'' subunit (chloroplast) [Leuc... 140 3e-37
AHY32966.1 RNA polymerase beta' subunit (chloroplast) [Haematoxy... 140 3e-37
YP_009242955.1 RNA polymerase beta'' subunit (chloroplast) [Astr... 140 3e-37
AJE71591.1 RNA polymerase beta'' subunit (plastid) [Melilotus of... 140 3e-37
YP_009175761.1 RNA polymerase beta'' subunit (chloroplast) [Astr... 140 3e-37
>AMC32360.1 RNA polymerase beta'' subunit (chloroplast) [Glycyrrhiza lepidota]
Length = 1388
Score = 152 bits (383), Expect = 4e-41
Identities = 76/76 (100%), Positives = 76/76 (100%)
Frame = +2
Query: 2 IFQKEDLIEYRGIKELKPKCQIKVDRFFFIPEEVHILPESSSIMVRNNSIIGIDTPITLN 181
IFQKEDLIEYRGIKELKPKCQIKVDRFFFIPEEVHILPESSSIMVRNNSIIGIDTPITLN
Sbjct: 637 IFQKEDLIEYRGIKELKPKCQIKVDRFFFIPEEVHILPESSSIMVRNNSIIGIDTPITLN 696
Query: 182 IRSRVGGLVRLEKKKK 229
IRSRVGGLVRLEKKKK
Sbjct: 697 IRSRVGGLVRLEKKKK 712
>YP_009027274.1 RNA polymerase beta' subunit (chloroplast) [Glycyrrhiza glabra]
AGU00070.1 RNA polymerase beta' subunit (chloroplast)
[Glycyrrhiza glabra]
Length = 1388
Score = 152 bits (383), Expect = 4e-41
Identities = 76/76 (100%), Positives = 76/76 (100%)
Frame = +2
Query: 2 IFQKEDLIEYRGIKELKPKCQIKVDRFFFIPEEVHILPESSSIMVRNNSIIGIDTPITLN 181
IFQKEDLIEYRGIKELKPKCQIKVDRFFFIPEEVHILPESSSIMVRNNSIIGIDTPITLN
Sbjct: 637 IFQKEDLIEYRGIKELKPKCQIKVDRFFFIPEEVHILPESSSIMVRNNSIIGIDTPITLN 696
Query: 182 IRSRVGGLVRLEKKKK 229
IRSRVGGLVRLEKKKK
Sbjct: 697 IRSRVGGLVRLEKKKK 712
>YP_009334191.1 RpoC2 (chloroplast) [Caragana microphylla] APL97397.1 RpoC2
(chloroplast) [Caragana microphylla]
Length = 1372
Score = 144 bits (363), Expect = 2e-38
Identities = 72/76 (94%), Positives = 74/76 (97%)
Frame = +2
Query: 2 IFQKEDLIEYRGIKELKPKCQIKVDRFFFIPEEVHILPESSSIMVRNNSIIGIDTPITLN 181
IFQKEDLIEYRGIKELKPK QIKVDRFFFIPEEVHILPESSSIMVRNNS++GI TPITLN
Sbjct: 639 IFQKEDLIEYRGIKELKPKSQIKVDRFFFIPEEVHILPESSSIMVRNNSLVGIGTPITLN 698
Query: 182 IRSRVGGLVRLEKKKK 229
IRSRVGGLVRLEKKKK
Sbjct: 699 IRSRVGGLVRLEKKKK 714
>AJE72230.1 RNA polymerase beta'' subunit (plastid) [Oxytropis lambertii]
Length = 1368
Score = 144 bits (362), Expect = 3e-38
Identities = 72/76 (94%), Positives = 74/76 (97%)
Frame = +2
Query: 2 IFQKEDLIEYRGIKELKPKCQIKVDRFFFIPEEVHILPESSSIMVRNNSIIGIDTPITLN 181
IFQKEDLIEYRGIKELKPK QIKVDRFFFIPEEVHILPESSSIMVRNNS++GI TPITLN
Sbjct: 637 IFQKEDLIEYRGIKELKPKYQIKVDRFFFIPEEVHILPESSSIMVRNNSLVGIGTPITLN 696
Query: 182 IRSRVGGLVRLEKKKK 229
IRSRVGGLVRLEKKKK
Sbjct: 697 IRSRVGGLVRLEKKKK 712
>CUR05062.1 rpoC2 (chloroplast) [Acacia obtecta]
Length = 1392
Score = 142 bits (357), Expect = 1e-37
Identities = 69/76 (90%), Positives = 75/76 (98%)
Frame = +2
Query: 2 IFQKEDLIEYRGIKELKPKCQIKVDRFFFIPEEVHILPESSSIMVRNNSIIGIDTPITLN 181
IF+KEDLIEYRG+KELKPK Q+KVDRFFFIPEEVHILPESSSIMVRNNSIIG+DTPIT+N
Sbjct: 644 IFKKEDLIEYRGVKELKPKYQMKVDRFFFIPEEVHILPESSSIMVRNNSIIGVDTPITVN 703
Query: 182 IRSRVGGLVRLEKKKK 229
IRSRVGGLVR+EKKKK
Sbjct: 704 IRSRVGGLVRVEKKKK 719
>CUR05427.1 rpoC2 (chloroplast) [Acacia puncticulata]
Length = 1390
Score = 142 bits (357), Expect = 1e-37
Identities = 69/76 (90%), Positives = 75/76 (98%)
Frame = +2
Query: 2 IFQKEDLIEYRGIKELKPKCQIKVDRFFFIPEEVHILPESSSIMVRNNSIIGIDTPITLN 181
IF+KEDLIEYRG+KELKPK Q+KVDRFFFIPEEVHILPESSSIMVRNNSIIG+DTPIT+N
Sbjct: 644 IFKKEDLIEYRGVKELKPKYQMKVDRFFFIPEEVHILPESSSIMVRNNSIIGVDTPITVN 703
Query: 182 IRSRVGGLVRLEKKKK 229
IRSRVGGLVR+EKKKK
Sbjct: 704 IRSRVGGLVRVEKKKK 719
>AHY33297.1 RNA polymerase beta' subunit (chloroplast) [Prosopis glandulosa]
Length = 1390
Score = 142 bits (357), Expect = 1e-37
Identities = 69/76 (90%), Positives = 75/76 (98%)
Frame = +2
Query: 2 IFQKEDLIEYRGIKELKPKCQIKVDRFFFIPEEVHILPESSSIMVRNNSIIGIDTPITLN 181
IF+KEDLIEYRG+KELKPK Q+KVDRFFFIPEEVHILPESSSIMVRNNSIIG+DTPIT+N
Sbjct: 639 IFKKEDLIEYRGVKELKPKYQMKVDRFFFIPEEVHILPESSSIMVRNNSIIGVDTPITVN 698
Query: 182 IRSRVGGLVRLEKKKK 229
IRSRVGGLVR+EKKKK
Sbjct: 699 IRSRVGGLVRVEKKKK 714
>AMC32372.1 RNA polymerase beta'' subunit (chloroplast) [Senna marilandica]
Length = 1389
Score = 142 bits (357), Expect = 1e-37
Identities = 69/76 (90%), Positives = 75/76 (98%)
Frame = +2
Query: 2 IFQKEDLIEYRGIKELKPKCQIKVDRFFFIPEEVHILPESSSIMVRNNSIIGIDTPITLN 181
IF+KEDLIEYRG+KELKPK Q+KVDRFFFIPEEVHILPESSSIMVRNNSIIG+DTPIT+N
Sbjct: 639 IFKKEDLIEYRGVKELKPKYQMKVDRFFFIPEEVHILPESSSIMVRNNSIIGVDTPITVN 698
Query: 182 IRSRVGGLVRLEKKKK 229
IRSRVGGLVR+EKKKK
Sbjct: 699 IRSRVGGLVRVEKKKK 714
>AJE72017.1 RNA polymerase beta'' subunit (plastid) [Chamaecrista fasciculata]
AMC32352.1 RNA polymerase beta'' subunit (chloroplast)
[Chamaecrista fasciculata]
Length = 1389
Score = 142 bits (357), Expect = 1e-37
Identities = 69/76 (90%), Positives = 75/76 (98%)
Frame = +2
Query: 2 IFQKEDLIEYRGIKELKPKCQIKVDRFFFIPEEVHILPESSSIMVRNNSIIGIDTPITLN 181
IF+KEDLIEYRG+KELKPK Q+KVDRFFFIPEEVHILPESSSIMVRNNSIIG+DTPIT+N
Sbjct: 639 IFKKEDLIEYRGVKELKPKYQMKVDRFFFIPEEVHILPESSSIMVRNNSIIGVDTPITVN 698
Query: 182 IRSRVGGLVRLEKKKK 229
IRSRVGGLVR+EKKKK
Sbjct: 699 IRSRVGGLVRVEKKKK 714
>YP_009233395.1 RpoC2 (chloroplast) [Wisteria sinensis] AMB27275.1 RpoC2
(chloroplast) [Wisteria sinensis]
Length = 1367
Score = 142 bits (357), Expect = 1e-37
Identities = 72/76 (94%), Positives = 73/76 (96%)
Frame = +2
Query: 2 IFQKEDLIEYRGIKELKPKCQIKVDRFFFIPEEVHILPESSSIMVRNNSIIGIDTPITLN 181
IFQKEDLIEYRGIKELKPK Q KVDRFFFIPEEVHILPESSSIMVRNNSI+GI TPITLN
Sbjct: 622 IFQKEDLIEYRGIKELKPKYQNKVDRFFFIPEEVHILPESSSIMVRNNSIVGIGTPITLN 681
Query: 182 IRSRVGGLVRLEKKKK 229
IRSRVGGLVRLEKKKK
Sbjct: 682 IRSRVGGLVRLEKKKK 697
>YP_009161290.1 RpoC2 (chloroplast) [Wisteria floribunda] AJC10039.1 RpoC2
(chloroplast) [Wisteria floribunda]
Length = 1367
Score = 142 bits (357), Expect = 1e-37
Identities = 72/76 (94%), Positives = 73/76 (96%)
Frame = +2
Query: 2 IFQKEDLIEYRGIKELKPKCQIKVDRFFFIPEEVHILPESSSIMVRNNSIIGIDTPITLN 181
IFQKEDLIEYRGIKELKPK Q KVDRFFFIPEEVHILPESSSIMVRNNSI+GI TPITLN
Sbjct: 622 IFQKEDLIEYRGIKELKPKYQNKVDRFFFIPEEVHILPESSSIMVRNNSIVGIGTPITLN 681
Query: 182 IRSRVGGLVRLEKKKK 229
IRSRVGGLVRLEKKKK
Sbjct: 682 IRSRVGGLVRLEKKKK 697
>CUR08503.1 rpoC2 (chloroplast) [Paraserianthes lophantha subsp. lophantha]
Length = 1361
Score = 142 bits (357), Expect = 1e-37
Identities = 69/76 (90%), Positives = 75/76 (98%)
Frame = +2
Query: 2 IFQKEDLIEYRGIKELKPKCQIKVDRFFFIPEEVHILPESSSIMVRNNSIIGIDTPITLN 181
IF+KEDLIEYRG+KELKPK Q+KVDRFFFIPEEVHILPESSSIMVRNNSIIG+DTPIT+N
Sbjct: 644 IFKKEDLIEYRGVKELKPKYQMKVDRFFFIPEEVHILPESSSIMVRNNSIIGVDTPITVN 703
Query: 182 IRSRVGGLVRLEKKKK 229
IRSRVGGLVR+EKKKK
Sbjct: 704 IRSRVGGLVRVEKKKK 719
>CUR08423.1 rpoC2 (chloroplast) [Pararchidendron pruinosum]
Length = 1361
Score = 142 bits (357), Expect = 1e-37
Identities = 69/76 (90%), Positives = 75/76 (98%)
Frame = +2
Query: 2 IFQKEDLIEYRGIKELKPKCQIKVDRFFFIPEEVHILPESSSIMVRNNSIIGIDTPITLN 181
IF+KEDLIEYRG+KELKPK Q+KVDRFFFIPEEVHILPESSSIMVRNNSIIG+DTPIT+N
Sbjct: 644 IFKKEDLIEYRGVKELKPKYQMKVDRFFFIPEEVHILPESSSIMVRNNSIIGVDTPITVN 703
Query: 182 IRSRVGGLVRLEKKKK 229
IRSRVGGLVR+EKKKK
Sbjct: 704 IRSRVGGLVRVEKKKK 719
>ANY60342.1 RNA polymerase beta'' subunit (chloroplast) [Mezoneuron cucullatum]
Length = 1392
Score = 141 bits (355), Expect = 2e-37
Identities = 68/76 (89%), Positives = 75/76 (98%)
Frame = +2
Query: 2 IFQKEDLIEYRGIKELKPKCQIKVDRFFFIPEEVHILPESSSIMVRNNSIIGIDTPITLN 181
IF+KEDLIEYRG+KELKPK ++KVDRFFFIPEEVHILPESSSIMVRNNSIIG+DTPIT+N
Sbjct: 641 IFKKEDLIEYRGVKELKPKYEMKVDRFFFIPEEVHILPESSSIMVRNNSIIGVDTPITIN 700
Query: 182 IRSRVGGLVRLEKKKK 229
IRSRVGGLVR+EKKKK
Sbjct: 701 IRSRVGGLVRVEKKKK 716
>AHY32799.1 RNA polymerase beta' subunit (chloroplast) [Libidibia coriaria]
Length = 1397
Score = 140 bits (354), Expect = 3e-37
Identities = 68/76 (89%), Positives = 75/76 (98%)
Frame = +2
Query: 2 IFQKEDLIEYRGIKELKPKCQIKVDRFFFIPEEVHILPESSSIMVRNNSIIGIDTPITLN 181
IF+KEDLIEYRG+KELKPK ++KVDRFFFIPEEVHILPESSSIMVRNNSIIG+DTPIT+N
Sbjct: 643 IFKKEDLIEYRGVKELKPKYEMKVDRFFFIPEEVHILPESSSIMVRNNSIIGVDTPITVN 702
Query: 182 IRSRVGGLVRLEKKKK 229
IRSRVGGLVR+EKKKK
Sbjct: 703 IRSRVGGLVRVEKKKK 718
>YP_009193156.1 RNA polymerase beta'' subunit (chloroplast) [Leucaena trichandra]
ALQ11544.1 RNA polymerase beta'' subunit (chloroplast)
[Leucaena trichandra]
Length = 1391
Score = 140 bits (354), Expect = 3e-37
Identities = 68/76 (89%), Positives = 75/76 (98%)
Frame = +2
Query: 2 IFQKEDLIEYRGIKELKPKCQIKVDRFFFIPEEVHILPESSSIMVRNNSIIGIDTPITLN 181
IF+KEDLIEYRG+KELKPK Q++VDRFFFIPEEVHILPESSSIMVRNNSIIG+DTPIT+N
Sbjct: 639 IFKKEDLIEYRGVKELKPKYQMRVDRFFFIPEEVHILPESSSIMVRNNSIIGVDTPITVN 698
Query: 182 IRSRVGGLVRLEKKKK 229
IRSRVGGLVR+EKKKK
Sbjct: 699 IRSRVGGLVRVEKKKK 714
>AHY32966.1 RNA polymerase beta' subunit (chloroplast) [Haematoxylum
brasiletto]
Length = 1391
Score = 140 bits (354), Expect = 3e-37
Identities = 68/76 (89%), Positives = 75/76 (98%)
Frame = +2
Query: 2 IFQKEDLIEYRGIKELKPKCQIKVDRFFFIPEEVHILPESSSIMVRNNSIIGIDTPITLN 181
IF+KEDLIEYRG+KELKPK ++KVDRFFFIPEEVHILPESSSIMVRNNSIIG+DTPIT+N
Sbjct: 639 IFKKEDLIEYRGVKELKPKYEMKVDRFFFIPEEVHILPESSSIMVRNNSIIGVDTPITVN 698
Query: 182 IRSRVGGLVRLEKKKK 229
IRSRVGGLVR+EKKKK
Sbjct: 699 IRSRVGGLVRVEKKKK 714
>YP_009242955.1 RNA polymerase beta'' subunit (chloroplast) [Astragalus
mongholicus] AMQ99218.1 RNA polymerase beta'' subunit
(chloroplast) [Astragalus mongholicus]
Length = 1376
Score = 140 bits (354), Expect = 3e-37
Identities = 71/76 (93%), Positives = 73/76 (96%)
Frame = +2
Query: 2 IFQKEDLIEYRGIKELKPKCQIKVDRFFFIPEEVHILPESSSIMVRNNSIIGIDTPITLN 181
IFQKEDLIEYRGIKELKPK QIKVDRFFFIPEEVHILPESSSIMVRNNS++GI TPITLN
Sbjct: 643 IFQKEDLIEYRGIKELKPKYQIKVDRFFFIPEEVHILPESSSIMVRNNSLVGIGTPITLN 702
Query: 182 IRSRVGGLVRLEKKKK 229
IRSRV GLVRLEKKKK
Sbjct: 703 IRSRVRGLVRLEKKKK 718
>AJE71591.1 RNA polymerase beta'' subunit (plastid) [Melilotus officinalis]
AJE71662.1 RNA polymerase beta'' subunit (plastid)
[Melilotus albus]
Length = 1376
Score = 140 bits (354), Expect = 3e-37
Identities = 70/76 (92%), Positives = 72/76 (94%)
Frame = +2
Query: 2 IFQKEDLIEYRGIKELKPKCQIKVDRFFFIPEEVHILPESSSIMVRNNSIIGIDTPITLN 181
IFQKED IEYRGIKELKPK QIKVDRFFFIPEEVHILPESSSIMVRNNS++GI TPIT N
Sbjct: 639 IFQKEDFIEYRGIKELKPKYQIKVDRFFFIPEEVHILPESSSIMVRNNSLVGIGTPITFN 698
Query: 182 IRSRVGGLVRLEKKKK 229
IRSRVGGLVRLEKKKK
Sbjct: 699 IRSRVGGLVRLEKKKK 714
>YP_009175761.1 RNA polymerase beta'' subunit (chloroplast) [Astragalus mongholicus
var. nakaianus] ALH42736.1 RNA polymerase beta'' subunit
(chloroplast) [Astragalus mongholicus var. nakaianus]
ANK78900.1 RNA polymerase beta'' subunit (chloroplast)
[Astragalus membranaceus var. membranaceus]
Length = 1372
Score = 140 bits (354), Expect = 3e-37
Identities = 71/76 (93%), Positives = 73/76 (96%)
Frame = +2
Query: 2 IFQKEDLIEYRGIKELKPKCQIKVDRFFFIPEEVHILPESSSIMVRNNSIIGIDTPITLN 181
IFQKEDLIEYRGIKELKPK QIKVDRFFFIPEEVHILPESSSIMVRNNS++GI TPITLN
Sbjct: 639 IFQKEDLIEYRGIKELKPKYQIKVDRFFFIPEEVHILPESSSIMVRNNSLVGIGTPITLN 698
Query: 182 IRSRVGGLVRLEKKKK 229
IRSRV GLVRLEKKKK
Sbjct: 699 IRSRVRGLVRLEKKKK 714