BLASTX nr result

ID: Glycyrrhiza36_contig00023851 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza36_contig00023851
         (240 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_013464465.1 F-box/RNI/FBD-like domain protein [Medicago trunc...    71   1e-12
GAU27358.1 hypothetical protein TSUD_55110 [Trifolium subterraneum]    62   9e-10
XP_013464459.1 FBD protein [Medicago truncatula] KEH38494.1 FBD ...    59   1e-08
GAU27371.1 hypothetical protein TSUD_55240 [Trifolium subterraneum]    59   2e-08
XP_013464466.1 F-box/RNI/FBD-like domain protein [Medicago trunc...    56   3e-07
XP_013455237.1 F-box/RNI/FBD-like domain protein [Medicago trunc...    55   7e-07
GAU27369.1 hypothetical protein TSUD_55230 [Trifolium subterraneum]    53   3e-06

>XP_013464465.1 F-box/RNI/FBD-like domain protein [Medicago truncatula] KEH38500.1
           F-box/RNI/FBD-like domain protein [Medicago truncatula]
          Length = 481

 Score = 70.9 bits (172), Expect = 1e-12
 Identities = 41/79 (51%), Positives = 52/79 (65%), Gaps = 1/79 (1%)
 Frame = -3

Query: 235 IYIDQDLLWPS-EPRGSAITFSTLHLKELTYLGNDISRTVILSDPSSAYNASAHISLYQS 59
           ++IDQDL   + EPR   I FS   LKE TY G+ IS+ ++LSDPSSA N +A+I LY+ 
Sbjct: 252 VFIDQDLESVTREPRNCKIKFSDSSLKEFTYCGDGISQAIVLSDPSSARNVAANIILYKR 311

Query: 58  GDVFPELVSNAFLLLKQFS 2
           G+   E  S A LLL QFS
Sbjct: 312 GNSVQESGSYACLLLNQFS 330


>GAU27358.1 hypothetical protein TSUD_55110 [Trifolium subterraneum]
          Length = 269

 Score = 62.4 bits (150), Expect = 9e-10
 Identities = 36/67 (53%), Positives = 42/67 (62%)
 Frame = -3

Query: 202 EPRGSAITFSTLHLKELTYLGNDISRTVILSDPSSAYNASAHISLYQSGDVFPELVSNAF 23
           EPR   I F+   LKE TY G+ IS+  ILSDPSSA NA A+I L + G+   E  S   
Sbjct: 50  EPRSCKIKFNVSRLKEFTYCGDGISQAFILSDPSSACNAEANIILDKRGNSVQETGSCTC 109

Query: 22  LLLKQFS 2
           LLLKQFS
Sbjct: 110 LLLKQFS 116


>XP_013464459.1 FBD protein [Medicago truncatula] KEH38494.1 FBD protein [Medicago
           truncatula]
          Length = 239

 Score = 59.3 bits (142), Expect = 1e-08
 Identities = 36/67 (53%), Positives = 40/67 (59%)
 Frame = -3

Query: 202 EPRGSAITFSTLHLKELTYLGNDISRTVILSDPSSAYNASAHISLYQSGDVFPELVSNAF 23
           EP    I FS  HLKE T+ G  IS+ VILSDPS A NA A+I L +  D  PE    AF
Sbjct: 69  EPCSCQIEFSDCHLKEFTFDGYAISQPVILSDPSIAKNACANIKLSKWQDGTPEAGLRAF 128

Query: 22  LLLKQFS 2
            LL QFS
Sbjct: 129 ALLNQFS 135


>GAU27371.1 hypothetical protein TSUD_55240 [Trifolium subterraneum]
          Length = 466

 Score = 59.3 bits (142), Expect = 2e-08
 Identities = 35/79 (44%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
 Frame = -3

Query: 235 IYIDQDLL-WPSEPRGSAITFSTLHLKELTYLGNDISRTVILSDPSSAYNASAHISLYQS 59
           + I+QD+L  P E     I F   HLKE T+ G  IS+ +++SDP  A NA A+I+L + 
Sbjct: 238 VCIEQDVLPSPDEVHSCEIKFFDCHLKEFTFNGYAISQPIVMSDPLRAQNACANITLSKY 297

Query: 58  GDVFPELVSNAFLLLKQFS 2
            D  PE    AF+LL QFS
Sbjct: 298 KDGTPEAGLRAFVLLNQFS 316


>XP_013464466.1 F-box/RNI/FBD-like domain protein [Medicago truncatula] KEH38501.1
           F-box/RNI/FBD-like domain protein [Medicago truncatula]
          Length = 463

 Score = 55.8 bits (133), Expect = 3e-07
 Identities = 35/68 (51%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
 Frame = -3

Query: 202 EPRGSAITFSTLHLKELTYLGNDISRTVILSDPSSAYNASAHISL-YQSGDVFPELVSNA 26
           E R   I FS   +KE TY G  +S+ +ILSDPS+A NASA I+L  + G+   E  S A
Sbjct: 242 ETRSCKIKFSASCMKEFTYRGYGMSQAIILSDPSAARNASAKITLDKEYGNSVQETQSCA 301

Query: 25  FLLLKQFS 2
            LLLKQFS
Sbjct: 302 SLLLKQFS 309


>XP_013455237.1 F-box/RNI/FBD-like domain protein [Medicago truncatula] KEH29268.1
           F-box/RNI/FBD-like domain protein [Medicago truncatula]
          Length = 442

 Score = 54.7 bits (130), Expect = 7e-07
 Identities = 33/69 (47%), Positives = 45/69 (65%), Gaps = 2/69 (2%)
 Frame = -3

Query: 202 EPRGSAITFSTLHLKELTYLGND-ISRTVILSDPSSAYNASAHISLYQSGDVFP-ELVSN 29
           E R   I FS   LKE TY G+D I + ++LS+PS AY+A  +I +Y+ G +   E+ S+
Sbjct: 226 ELRSCKIKFSASCLKEFTYCGHDGIMQPIVLSNPSVAYDAYVNIIIYKRGSIVDREIGSS 285

Query: 28  AFLLLKQFS 2
           A LLLKQFS
Sbjct: 286 ACLLLKQFS 294


>GAU27369.1 hypothetical protein TSUD_55230 [Trifolium subterraneum]
          Length = 300

 Score = 52.8 bits (125), Expect = 3e-06
 Identities = 35/80 (43%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
 Frame = -3

Query: 235 IYIDQDLLWPSEPRGSAITFSTLHLKELTYLG-NDISRTVILSDPSSAYNASAHISLYQ- 62
           +YI  +     EP  S I FS   +   TY G   IS+ V+LS+PS+A NAS +ISLY+ 
Sbjct: 73  VYIQDNNCVSHEPHSSTIKFSASCMTGFTYCGYGGISQPVVLSNPSAARNASVNISLYRY 132

Query: 61  SGDVFPELVSNAFLLLKQFS 2
            G       S   LLLKQFS
Sbjct: 133 QGSYVQGTGSRVCLLLKQFS 152


Top