BLASTX nr result

ID: Glycyrrhiza36_contig00023475 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza36_contig00023475
         (830 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GAU35755.1 hypothetical protein TSUD_370210 [Trifolium subterran...    74   1e-12
GAU31197.1 hypothetical protein TSUD_210540 [Trifolium subterran...    62   8e-10

>GAU35755.1 hypothetical protein TSUD_370210 [Trifolium subterraneum]
          Length = 143

 Score = 73.6 bits (179), Expect = 1e-12
 Identities = 39/92 (42%), Positives = 54/92 (58%)
 Frame = +1

Query: 370 NLLVHFVGEVTMPVLNVDLDRYSYLDLVNDIHEMAVAGGCKDGGLSFALSFCHPSSQSRN 549
           +L VHF G V++P+LN+  DRYSY DLV+DI+E+A   G K                   
Sbjct: 15  HLRVHFEGGVSLPILNIVPDRYSYFDLVDDINELATKVGYK------------------- 55

Query: 550 PINIDSDVIGMFNLNSKCICIDVYATLINYDD 645
               D+DV+ MF LN+ C CI VYATL+N+++
Sbjct: 56  ----DADVLEMFKLNNMCSCIHVYATLLNHEE 83


>GAU31197.1 hypothetical protein TSUD_210540 [Trifolium subterraneum]
          Length = 456

 Score = 61.6 bits (148), Expect(2) = 8e-10
 Identities = 34/55 (61%), Positives = 43/55 (78%), Gaps = 1/55 (1%)
 Frame = +3

Query: 669 ETVISESDDEWRMGDESQENEGEEIYSDSSYIDV-EERQNGNNNDELSDYEEKHE 830
           +T+ISESD EW +GDE ++NE EE  +DSS+ D+ EER N  N DELSDYEEKH+
Sbjct: 31  DTIISESDVEW-VGDELEQNESEE--TDSSFSDINEERINEINIDELSDYEEKHD 82



 Score = 30.4 bits (67), Expect(2) = 8e-10
 Identities = 12/22 (54%), Positives = 17/22 (77%)
 Frame = +1

Query: 580 MFNLNSKCICIDVYATLINYDD 645
           MF LN+   CI VYATL+N+++
Sbjct: 1   MFKLNNMYSCIHVYATLLNHEE 22


Top