BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza36_contig00019283
         (2757 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GAU46782.1 hypothetical protein TSUD_351810 [Trifolium subterran...   941   0.0  
GAU15708.1 hypothetical protein TSUD_307180 [Trifolium subterran...   908   0.0  
GAU38852.1 hypothetical protein TSUD_154140 [Trifolium subterran...   909   0.0  
KHN05285.1 Retrovirus-related Pol polyprotein from transposon TN...   883   0.0  
KYP36109.1 Retrovirus-related Pol polyprotein from transposon TN...   875   0.0  
GAU47513.1 hypothetical protein TSUD_138850 [Trifolium subterran...   876   0.0  
KYP34298.1 Retrovirus-related Pol polyprotein from transposon TN...   850   0.0  
KYP65734.1 Retrovirus-related Pol polyprotein from transposon TN...   838   0.0  
KYP61022.1 Retrovirus-related Pol polyprotein from transposon TN...   848   0.0  
GAU31820.1 hypothetical protein TSUD_58210 [Trifolium subterraneum]   846   0.0  
KYP42564.1 Retrovirus-related Pol polyprotein from transposon TN...   845   0.0  
KYP34293.1 Retrovirus-related Pol polyprotein from transposon TN...   839   0.0  
KYP55668.1 Retrovirus-related Pol polyprotein from transposon TN...   822   0.0  
KHN01991.1 Retrovirus-related Pol polyprotein from transposon TN...   828   0.0  
KYP70921.1 Retrovirus-related Pol polyprotein from transposon TN...   827   0.0  
KYP43110.1 Retrovirus-related Pol polyprotein from transposon TN...   823   0.0  
GAU20316.1 hypothetical protein TSUD_337970 [Trifolium subterran...   808   0.0  
KZV25004.1 Cysteine-rich RLK (receptor-like protein kinase) 8 [D...   804   0.0  
GAU51775.1 hypothetical protein TSUD_415620 [Trifolium subterran...   721   0.0  
GAU40777.1 hypothetical protein TSUD_26570 [Trifolium subterraneum]   709   0.0  

>GAU46782.1 hypothetical protein TSUD_351810 [Trifolium subterraneum]
          Length = 1512

 Score =  941 bits (2432), Expect = 0.0
 Identities = 474/930 (50%), Positives = 618/930 (66%), Gaps = 31/930 (3%)
 Frame = +3

Query: 3    RRLPFVVSNNRAENCFDLVHLDVWGPCSLPSIHGYRFFLTIVDDHSRYTWTVLLKGKFEV 182
            ++L + +S N+A +C +L+H D+WGP S+ SIHG+R+FLT +DD SR+TW +LLK K EV
Sbjct: 577  KKLTYKLSVNKASHCGELIHFDIWGPTSIHSIHGHRYFLTAIDDFSRFTWVILLKSKAEV 636

Query: 183  KGKVIEFFNMVENQFSRKVKAIRSDNGTEFNLSDVCRERGIIHQLSCVETLEQNARVERK 362
               VI+F  M+E QF+  V+ IR+DNG EF + +    +GI HQ SCVET +QN RVERK
Sbjct: 637  SSLVIQFITMIEKQFNTIVRTIRTDNGPEFLIPEFYASKGINHQTSCVETPQQNGRVERK 696

Query: 363  HQHLLSVARALMLQASLPKYLWSYAILHAVHLINRMPSVVLNSSSPYQLLHGVLPYLNNL 542
            HQHLL+V R+L+ Q+ LPK  WSYA+ HA ++INR+ + +L + SPY LL+   P L  L
Sbjct: 697  HQHLLNVGRSLLFQSKLPKKFWSYAVSHATYIINRVCTPLLQNKSPYHLLYNKPPDLEQL 756

Query: 543  RVFGCLCYTSTNCSGRGKFDSRARKCVFLGYKMHVKGAVTYDVRSREIIVSRNVVFYENI 722
            +VFG LCY ST  + R K D RARKC+FLGYK  +KG + YD+ +  I VSRN+  Y++I
Sbjct: 757  KVFGSLCYASTLQNQRTKLDPRARKCIFLGYKSGMKGVILYDIHNHNIFVSRNITHYDHI 816

Query: 723  FPYKC-----------------------NSSRGSVAYLK---RWDTGXXXXXXXXXXXXX 824
             PY                         NS   S+ +      ++T              
Sbjct: 817  LPYASSSYSIPWSYHSPNIDPFITPPTSNSGSSSIPHSTDHIHFNTPMCDQENPSQPSSQ 876

Query: 825  XXXXXXXXXLSLNGQPSSFPNPPNTPATSQDTPIDTNHLPDXXXXXXXXXXNLRHSTRPH 1004
                     ++ N   SS P+ P+ P  +  +P+ T +LP             R STR  
Sbjct: 877  TPSDLFVPQVTDNDIVSSQPSIPHQPHDTH-SPLPTTNLPSPSHNSIP---QTRQSTRMS 932

Query: 1005 KPPSHLNDYICNHISSINPPR-----YPIHAYVSYASLSQPHRAYTMSLDAVPEPSSFCE 1169
              P HL+DY+CN     +PP      YPI ++ SY+++S   R Y +S+ A  EP  + E
Sbjct: 933  VKPKHLSDYVCNLSVDSSPPSSPGILYPISSFHSYSNISSKFRNYALSITASVEPRDYKE 992

Query: 1170 ASKHTCWVEAMQQELTALEKNQTWIIVDKPANVIPIGCKWVYKVKRKADGSLERYKARLV 1349
            AS+  CWV+AM  E+ AL+ N+TW  V  PA++ PIGCKWVYKVK KADGS+ERYKARLV
Sbjct: 993  ASQQQCWVDAMNNEIQALQHNKTWCYVTPPAHIKPIGCKWVYKVKHKADGSVERYKARLV 1052

Query: 1350 AKGYTQTEGIDYFDTFSPVAKMTTVRTLIALAAIKGWHIHQLDVNNAFLHGQLQEKVYTS 1529
            AKGY Q EG+D+FDTFSPVAK+TTVRTLIALA+I+ WH++Q+DVNNAFLHG LQE VY  
Sbjct: 1053 AKGYNQVEGLDFFDTFSPVAKITTVRTLIALASIRSWHLNQMDVNNAFLHGDLQEDVYME 1112

Query: 1530 IPQGVQISGSNKVCKLLKSLYGLKQASRKWYERLTNLLLGLGFKQAHSDHSLFTKITQSS 1709
            +PQGV     ++VCKLLKSLYGLKQASRKWYE+LT+LLL  G+ QA SDHSLFT    S 
Sbjct: 1113 VPQGVNSPKPHQVCKLLKSLYGLKQASRKWYEKLTSLLLKEGYTQASSDHSLFTLKHGSD 1172

Query: 1710 YIALLIYIDDIVLVGDCLSQLQQIKTVLDHNXXXXXXXXXXXXXXXEAAHSPRGISLCQR 1889
            + ALL+Y+DDI+L G+ L +  +IK ++D+                E AHS +GIS+CQR
Sbjct: 1173 FTALLVYVDDIILAGNSLQEFARIKLIMDNAFKIKDLGPLKYFLGIEVAHSKQGISICQR 1232

Query: 1890 QYCLNLLTDTGVLAAKPASTPMAPNSHLHQDDGPLFPDVECXXXXXXXXXXXXXXXPDIT 2069
            +YCL+LL DTG+L +KPA TP+ P+  LHQD  P + DV                 PDI+
Sbjct: 1233 KYCLDLLKDTGLLGSKPAPTPLDPSIKLHQDSSPAYDDVGGYRRLIGKLLYLTTTRPDIS 1292

Query: 2070 FAVQQLSQFLSKPTMTHYKAAQRILHYLKGSPGQGLFFSRSSSLDLQGYTDSNWAGCPDS 2249
            FA+QQLSQFLS PT TH+  A R++ YLKGSPG+GLFF R S L L G+ D++WA C D+
Sbjct: 1293 FAIQQLSQFLSSPTTTHFDTACRVVRYLKGSPGRGLFFPRQSPLQLLGFADADWANCADT 1352

Query: 2250 RRSISGYCFFLGESLIAWRSKKQTTVACSSSEAEYRALAFATCELQWIQFLLDDLGIVHS 2429
            RRS SGYCFF+G SLI+WR+KKQ TV+ SSSEAEYR+L+FA+CELQWI +LL DL I   
Sbjct: 1353 RRSTSGYCFFIGSSLISWRAKKQNTVSRSSSEAEYRSLSFASCELQWIVYLLKDLSIDCE 1412

Query: 2430 KQPVLYCDNKSALHIAANPVFHERTKHLEIDCHVVRDKVNSGLMKLQPMPSAHQVADLFT 2609
            + PVLYCDN+SA+HIA+NPVFHERTKHLEIDCH+VRDKV SG+ KL P+ +  Q+AD FT
Sbjct: 1413 RPPVLYCDNQSAIHIASNPVFHERTKHLEIDCHLVRDKVQSGVFKLLPISTKAQLADFFT 1472

Query: 2610 KALLPQSFSHLVTKLQMLNIYQSLDCAGII 2699
            KAL P+ F+  ++KL MLNI+    C  ++
Sbjct: 1473 KALPPKVFNSFLSKLNMLNIFHVPACGRLL 1502


>GAU15708.1 hypothetical protein TSUD_307180 [Trifolium subterraneum]
          Length = 1433

 Score =  908 bits (2347), Expect = 0.0
 Identities = 463/903 (51%), Positives = 599/903 (66%), Gaps = 12/903 (1%)
 Frame = +3

Query: 3    RRLPFVVSNNRAENCFDLVHLDVWGPCSLPSIHGYRFFLTIVDDHSRYTWTVLLKGKFEV 182
            ++L + +S +++  CF+L+H+D+WGP S  ++HG+++FLTIVDD SR+TW +LLKGK EV
Sbjct: 540  KKLSYSLSTSKSTKCFELLHMDIWGPYSTATLHGHKYFLTIVDDFSRFTWVILLKGKNEV 599

Query: 183  KGKVIEFFNMVENQFSRKVKAIRSDNGTEFNLSDVCRERGIIHQLSCVETLEQNARVERK 362
               V  F ++VENQF   VK +RSDNG EF+LS     + I+HQ SCV T +QN RVERK
Sbjct: 600  ASHVQHFIHLVENQFESTVKIVRSDNGPEFSLSSFYASKRIVHQTSCVYTPQQNGRVERK 659

Query: 363  HQHLLSVARALMLQASLPKYLWSYAILHAVHLINRMPSVVLNSSSPYQLLHGVLPYLNNL 542
            HQ +L++ARAL++Q+ LP   W YA+LH+V+L+NRMPSV +    PY  LH  LP ++ L
Sbjct: 660  HQCILAIARALLIQSHLPAKYWGYAVLHSVYLMNRMPSVAIEGGLPYHKLHNRLPDISML 719

Query: 543  RVFGCLCYTSTNCSGRGKFDSRARKCVFLGYKMHVKGAVTYDVRSREIIVSRNVVFYENI 722
            ++FGCLCY ST    R K D RARKC FLG+K   KG V  D+ S EI+VSRNV F E I
Sbjct: 720  KIFGCLCYVSTTDVHRLKLDHRARKCAFLGFKSGTKGFVALDLHSYEIVVSRNVQFEELI 779

Query: 723  FPYKCNSSRGSVAYLKRWDTGXXXXXXXXXXXXXXXXXXXXXXLSLNGQPSSF-PNPPNT 899
            FPY   +   +     +W+                        L+ + +P++  P   N 
Sbjct: 780  FPYPSQTQSQT-----KWE--------------FFIPPIDPIPLTNDTEPTTDQPTTSND 820

Query: 900  PATSQDTPIDTNHLPDXXXXXXXXXXN-----------LRHSTRPHKPPSHLNDYICNHI 1046
             +T    P+D+    +          +           LR STR  K P HL DY CN+I
Sbjct: 821  TSTISIEPVDSISSNESITPPAPPDASPQYSPTTEPPPLRKSTRITKLPPHLLDYECNNI 880

Query: 1047 SSINPPRYPIHAYVSYASLSQPHRAYTMSLDAVPEPSSFCEASKHTCWVEAMQQELTALE 1226
              ++  +YPI  Y S+  LS    +YT+SL    EPSS+ EA KH  WV+AM  EL ALE
Sbjct: 881  --VHSTKYPISKYTSHNHLSSKQLSYTLSLLTETEPSSYSEACKHDHWVKAMNAELQALE 938

Query: 1227 KNQTWIIVDKPANVIPIGCKWVYKVKRKADGSLERYKARLVAKGYTQTEGIDYFDTFSPV 1406
            +N+TW IV  P    PIG KWVYKVKRKADGS+ERYKARLVAKGY Q EGIDYF+TFSPV
Sbjct: 939  QNKTWSIVSLPVGAKPIGSKWVYKVKRKADGSIERYKARLVAKGYNQVEGIDYFETFSPV 998

Query: 1407 AKMTTVRTLIALAAIKGWHIHQLDVNNAFLHGQLQEKVYTSIPQGVQISGSNKVCKLLKS 1586
            AKMTT+R ++A+A+IK W +HQLDVNNAFLHG+L E VY  IPQG+    ++KVCKL KS
Sbjct: 999  AKMTTIRVILAIASIKNWFVHQLDVNNAFLHGELCEDVYMKIPQGLDGFSADKVCKLTKS 1058

Query: 1587 LYGLKQASRKWYERLTNLLLGLGFKQAHSDHSLFTKITQSSYIALLIYIDDIVLVGDCLS 1766
            LYGLKQASRKWYE+L+  L+   F QA SD +LF K T  ++ ALL+Y+DDIVL GD ++
Sbjct: 1059 LYGLKQASRKWYEKLSQFLISHQFTQAPSDPTLFVKKTSENFTALLVYVDDIVLTGDSMN 1118

Query: 1767 QLQQIKTVLDHNXXXXXXXXXXXXXXXEAAHSPRGISLCQRQYCLNLLTDTGVLAAKPAS 1946
            ++  IK  L+H                E AHS +GI+L QRQYCL+LL +TG L  KP+S
Sbjct: 1119 EITNIKNDLNHTFGIKDLGVLKFFLGLEVAHSLKGITLSQRQYCLDLLAETGDLGCKPSS 1178

Query: 1947 TPMAPNSHLHQDDGPLFPDVECXXXXXXXXXXXXXXXPDITFAVQQLSQFLSKPTMTHYK 2126
             PM P+  LH DD   + D+                 PDI F VQQL QFL  PT+ HYK
Sbjct: 1179 IPMDPSLKLHHDDSTPYNDITGYRTLVGKLLYLTNTRPDIAFPVQQLCQFLDCPTILHYK 1238

Query: 2127 AAQRILHYLKGSPGQGLFFSRSSSLDLQGYTDSNWAGCPDSRRSISGYCFFLGESLIAWR 2306
            AA ++L YLKG PG GL+F RSS   L G+TD++W GC D+RRSI+GYCFFLG SLI W+
Sbjct: 1239 AAHKVLRYLKGCPGTGLYFPRSSDAHLTGFTDADWGGCVDTRRSITGYCFFLGSSLICWK 1298

Query: 2307 SKKQTTVACSSSEAEYRALAFATCELQWIQFLLDDLGIVHSKQPVLYCDNKSALHIAANP 2486
            SKKQ T++ SSSEAEYRALA  TCELQW+ +L  DL +  +++P+LYCD++SA+HIA+NP
Sbjct: 1299 SKKQQTISRSSSEAEYRALASGTCELQWLTYLFRDLQVTLTQKPLLYCDSQSAIHIASNP 1358

Query: 2487 VFHERTKHLEIDCHVVRDKVNSGLMKLQPMPSAHQVADLFTKALLPQSFSHLVTKLQMLN 2666
            VFHERTKHL+IDCHVVR+++ SGLMKL P+    Q+AD+ TKAL P +F  L+TKL +L+
Sbjct: 1359 VFHERTKHLDIDCHVVRERLQSGLMKLLPVSGFLQLADIMTKALHPANFHRLLTKLGLLD 1418

Query: 2667 IYQ 2675
            IY+
Sbjct: 1419 IYR 1421


>GAU38852.1 hypothetical protein TSUD_154140 [Trifolium subterraneum]
          Length = 1494

 Score =  909 bits (2349), Expect = 0.0
 Identities = 464/889 (52%), Positives = 603/889 (67%), Gaps = 5/889 (0%)
 Frame = +3

Query: 3    RRLPFVVSNNRAENCFDLVHLDVWGPCSLPSIHGYRFFLTIVDDHSRYTWTVLLKGKFEV 182
            R+LP+V S++RA    +L+H+D+WGP S  + HG+++FLTIVDD SR+TW VLLKGK+EV
Sbjct: 561  RKLPYVTSSSRASVILELLHMDIWGPFSTSTTHGHKYFLTIVDDFSRFTWIVLLKGKYEV 620

Query: 183  KGKVIEFFNMVENQFSRKVKAIRSDNGTEF-NLSDVCRERGIIHQLSCVETLEQNARVER 359
              KV EF N  EN F  KVK +RSDNG EF +LS     +GI HQ SCV T +QN RVER
Sbjct: 621  ASKVQEFINFAENHFCHKVKFLRSDNGQEFLSLSKFYISKGIQHQTSCVYTPQQNGRVER 680

Query: 360  KHQHLLSVARALMLQASLPKYLWSYAILHAVHLINRMPSVVLNSSSPYQLLHGVLPYLNN 539
            KHQ +L++ARALM Q+ LP   W YA+L +V ++NR+PS  L    P+  L+G LP L++
Sbjct: 681  KHQCILNIARALMTQSHLPAKYWGYAVLQSVFIMNRVPSNALKGQIPFVALYGKLPELSD 740

Query: 540  LRVFGCLCYTSTNCSGRGKFDSRARKCVFLGYKMHVKGAVTYDVRSREIIVSRNVVFYEN 719
            L+VFG LC+ ST+ + R K D RARKCV+LG K  VKG V  D+ + EIIVSRNVVF E 
Sbjct: 741  LKVFGSLCFVSTHDNQRSKLDPRARKCVYLGIKPGVKGYVALDLHNYEIIVSRNVVFEET 800

Query: 720  IFPYKCNSSRGSVAYLKRWDTGXXXXXXXXXXXXXXXXXXXXXXLSLNGQPSSFPNPPNT 899
            IFPY  ++S+ +  Y++                           LS N    S   P + 
Sbjct: 801  IFPYPVSNSKTAWEYVEPTPN----THPSTEPTKTRNSQETTDDLSTNHDHDSIDLPLDQ 856

Query: 900  PA----TSQDTPIDTNHLPDXXXXXXXXXXNLRHSTRPHKPPSHLNDYICNHISSINPPR 1067
            P+    TS      TN  P             R STR  + P HL DY CN I+   P  
Sbjct: 857  PSDRTTTSTHDQKFTNSSP-------------RRSTRIKQTPLHLMDYQCNAITHKTP-- 901

Query: 1068 YPIHAYVSYASLSQPHRAYTMSLDAVPEPSSFCEASKHTCWVEAMQQELTALEKNQTWII 1247
            YPI +++S+ +LS+ +  + +SL A  EP+++ EASKH CWV+AM+ ELTAL  N+TWII
Sbjct: 902  YPISSFISHNNLSKSYSTFCLSLLADTEPTTYAEASKHECWVKAMKNELTALANNKTWII 961

Query: 1248 VDKPANVIPIGCKWVYKVKRKADGSLERYKARLVAKGYTQTEGIDYFDTFSPVAKMTTVR 1427
             D P  V PIG KWVYK+KRKADG+++RYKARLVAKGY Q EG+D+  TFSPVAKMTT+R
Sbjct: 962  TDLPEGVKPIGSKWVYKIKRKADGTIDRYKARLVAKGYNQIEGVDFSQTFSPVAKMTTIR 1021

Query: 1428 TLIALAAIKGWHIHQLDVNNAFLHGQLQEKVYTSIPQGVQISGSNKVCKLLKSLYGLKQA 1607
            T++A+A+IK WHIHQLDV+NAFLHG L E VY ++PQ  + + S +VCKL K LYGL+QA
Sbjct: 1022 TVLAIASIKNWHIHQLDVDNAFLHGDLDENVYMTVPQRFEGATSRQVCKLQKFLYGLRQA 1081

Query: 1608 SRKWYERLTNLLLGLGFKQAHSDHSLFTKITQSSYIALLIYIDDIVLVGDCLSQLQQIKT 1787
            SR+WYE+L++ L+ +G+K   SD +LFTK T +S+  LL+Y+DDIVL G+CL++++  K+
Sbjct: 1082 SRQWYEKLSHFLITIGYKHMPSDPTLFTKTTSASFTTLLVYVDDIVLSGNCLAEIESTKS 1141

Query: 1788 VLDHNXXXXXXXXXXXXXXXEAAHSPRGISLCQRQYCLNLLTDTGVLAAKPASTPMAPNS 1967
             L                  E AHS +GI+LCQR+YCL+LL DTG L  KP+S PM P++
Sbjct: 1142 QLHQAFGIKDIGVLKFFLGLEVAHSQQGITLCQRKYCLDLLNDTGNLGCKPSSIPMDPSN 1201

Query: 1968 HLHQDDGPLFPDVECXXXXXXXXXXXXXXXPDITFAVQQLSQFLSKPTMTHYKAAQRILH 2147
             LH DD     ++                 PDI F VQQLSQFL  PT  H+KAA ++L 
Sbjct: 1202 RLHHDDSEPHSNITEYRALVGKLLYLTSTRPDIAFPVQQLSQFLDAPTTAHFKAAHKVLR 1261

Query: 2148 YLKGSPGQGLFFSRSSSLDLQGYTDSNWAGCPDSRRSISGYCFFLGESLIAWRSKKQTTV 2327
            YLKG+PG GLFF R++SL L G++D++W GCPDSRRSI+GYCFF+G+SLI W+SKKQ TV
Sbjct: 1262 YLKGNPGTGLFFPRNASLQLMGFSDADWGGCPDSRRSITGYCFFIGQSLICWKSKKQLTV 1321

Query: 2328 ACSSSEAEYRALAFATCELQWIQFLLDDLGIVHSKQPVLYCDNKSALHIAANPVFHERTK 2507
            + SSSEAEYRALA ATCELQW+ +LL DL +   K  VLYCD++SALHIA+NPVFHERTK
Sbjct: 1322 SKSSSEAEYRALASATCELQWLSYLLKDLQVHIDKANVLYCDSQSALHIASNPVFHERTK 1381

Query: 2508 HLEIDCHVVRDKVNSGLMKLQPMPSAHQVADLFTKALLPQSFSHLVTKL 2654
            HL+IDCH+VR+K+ +GLMKL P+   +Q AD+ TKAL P +F  L +KL
Sbjct: 1382 HLDIDCHIVREKLQAGLMKLLPISGYNQTADILTKALHPANFHRLFSKL 1430


>KHN05285.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Glycine soja]
          Length = 1346

 Score =  883 bits (2282), Expect = 0.0
 Identities = 449/884 (50%), Positives = 588/884 (66%), Gaps = 12/884 (1%)
 Frame = +3

Query: 3    RRLPFVVSNNRAENCFDLVHLDVWGPCSLPSIHGYRFFLTIVDDHSRYTWTVLLKGKFEV 182
            R+LPFV S ++A  CFDL+H D+WGP S+ S+H + +FLT VDDHSRYTW  L+K K E 
Sbjct: 475  RKLPFVHSYHKAIKCFDLIHFDIWGPISIKSVHNHAYFLTAVDDHSRYTWITLMKNKSEA 534

Query: 183  KGKVIEFFNMVENQFSRKVKAIRSDNGTEFNLSDVCRERGIIHQLSCVETLEQNARVERK 362
            +  V  F + ++ Q++  VK+IR+DNG EF + D    +GI+HQ SCV++ +QN RVERK
Sbjct: 535  RLHVQNFIHFIKTQYNHSVKSIRTDNGPEFLMPDFYASKGILHQTSCVDSPQQNGRVERK 594

Query: 363  HQHLLSVARALMLQASLPKYLWSYAILHAVHLINRMPSVVLNSSSPYQLLHGVLPYLNNL 542
            HQ +L++ RAL++Q++LPK  W YA+ HAV+++NR+P+  L + SPY LL+   P  + L
Sbjct: 595  HQQILNIGRALLVQSNLPKSFWCYAVSHAVYIMNRVPAPNLQNKSPYTLLYNTAPDFDTL 654

Query: 543  RVFGCLCYTSTNCSGRGKFDSRARKCVFLGYKMHVKGAVTYDVRSREIIVSRNVVFYENI 722
            +VFG L + ST  S R K D RARKCVFLGYK  VKG V  D+ +  I +SR+V  +E+I
Sbjct: 655  KVFGSLVFASTLQSHRTKLDLRARKCVFLGYKSGVKGVVLLDLLNNSIFLSRDVTHHEHI 714

Query: 723  FPYKCNSSRGSVAYLKRWDTGXXXXXXXXXXXXXXXXXXXXXXLSLNGQPSSFPNPPNT- 899
            FPY+ +S +    Y     T                       +SL+      P+PP++ 
Sbjct: 715  FPYQSSSPKTPWEYHSISPT------------PNDSDITLDSDISLDINAEQSPSPPHSS 762

Query: 900  --PATSQDTPI-DTNHLPDXXXXXXXXXXNLRHSTRPHKPPSHLNDYICNHIS------- 1049
              P  S DT I DT+                    R  + P HL+DY+C++ S       
Sbjct: 763  LSPNISNDTVISDTSTSTPPPKDHNDSPLLHSKPIRQRRAPLHLSDYVCHNTSPTSHESL 822

Query: 1050 -SINPPRYPIHAYVSYASLSQPHRAYTMSLDAVPEPSSFCEASKHTCWVEAMQQELTALE 1226
             S    +YP+ ++ S   LS  H+A++MS+    EP S+ EASKH  WV AM++EL AL 
Sbjct: 823  TSGTKSKYPLSSFHSLTLLSPSHKAFSMSITHCTEPQSYEEASKHEHWVTAMKEELNALA 882

Query: 1227 KNQTWIIVDKPANVIPIGCKWVYKVKRKADGSLERYKARLVAKGYTQTEGIDYFDTFSPV 1406
            KN TW IV+ P +  PIGCKWVYKVK KA+G +ERYKARLVAKGY Q EGIDYF+TFSPV
Sbjct: 883  KNCTWKIVELPPHTKPIGCKWVYKVKHKANGQIERYKARLVAKGYNQVEGIDYFETFSPV 942

Query: 1407 AKMTTVRTLIALAAIKGWHIHQLDVNNAFLHGQLQEKVYTSIPQGVQISGSNKVCKLLKS 1586
            AK+TTVRTL+A+AAIK WH+HQLDVNNAFLHG LQE VY  IP GV  +  N VCKL KS
Sbjct: 943  AKITTVRTLLAVAAIKNWHLHQLDVNNAFLHGDLQEDVYMKIPDGVTCAKPNSVCKLQKS 1002

Query: 1587 LYGLKQASRKWYERLTNLLLGLGFKQAHSDHSLFTKITQSSYIALLIYIDDIVLVGDCLS 1766
            LYGLKQASRKWYE+LTNLLL  G+ Q+ SD+SLFT    +++ ALL+Y+DDI+L GD + 
Sbjct: 1003 LYGLKQASRKWYEKLTNLLLKEGYIQSISDYSLFTLTKGNTFTALLVYVDDIILAGDSID 1062

Query: 1767 QLQQIKTVLDHNXXXXXXXXXXXXXXXEAAHSPRGISLCQRQYCLNLLTDTGVLAAKPAS 1946
            +  +IK VLD                 E AHS  GI++ QR+YCL+LL D+G+L  KPAS
Sbjct: 1063 EFDRIKNVLDLAFKIKNLGKLKYFLGLEVAHSRLGITISQRKYCLDLLKDSGLLGCKPAS 1122

Query: 1947 TPMAPNSHLHQDDGPLFPDVECXXXXXXXXXXXXXXXPDITFAVQQLSQFLSKPTMTHYK 2126
            TP+  +  LH   G  + D+                 PDI FA QQLSQF+  PT  H+ 
Sbjct: 1123 TPLDTSIKLHSAAGTPYADISGYRRIVGKLLYLNTTRPDIAFATQQLSQFMQAPTNVHFN 1182

Query: 2127 AAQRILHYLKGSPGQGLFFSRSSSLDLQGYTDSNWAGCPDSRRSISGYCFFLGESLIAWR 2306
            AA R+L YLK +PGQG+FFSR+S + L GY+D++WAGC DSR+SISGYCFF+G+SL++WR
Sbjct: 1183 AACRVLRYLKNNPGQGIFFSRTSEMQLIGYSDADWAGCMDSRKSISGYCFFIGKSLVSWR 1242

Query: 2307 SKKQTTVACSSSEAEYRALAFATCELQWIQFLLDDLGIVHSKQPVLYCDNKSALHIAANP 2486
            +KKQ TV+ SSSEAEYRAL+ A CELQW+ +L  DL +  ++ P LYCDN+SA+HIA+NP
Sbjct: 1243 AKKQATVSRSSSEAEYRALSSAACELQWLLYLFADLRVQLTRTPTLYCDNQSAVHIASNP 1302

Query: 2487 VFHERTKHLEIDCHVVRDKVNSGLMKLQPMPSAHQVADLFTKAL 2618
            VFHERTKHLEIDCH+VR+K+  G +KL P+ ++ QVAD  TKAL
Sbjct: 1303 VFHERTKHLEIDCHLVREKLLKGTLKLLPVSTSDQVADFLTKAL 1346


>KYP36109.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1115

 Score =  875 bits (2260), Expect = 0.0
 Identities = 459/910 (50%), Positives = 597/910 (65%), Gaps = 12/910 (1%)
 Frame = +3

Query: 3    RRLPFVVSNNRAENCFDLVHLDVWGPCSLPSIHGYRFFLTIVDDHSRYTWTVLLKGKFEV 182
            ++L +  S++R    FDL+H+D+WGP S  SIHG+++FLTI+DD SRYTW VLLK K EV
Sbjct: 235  KKLSYSPSSSRVSKIFDLIHMDIWGPFSKASIHGHKYFLTILDDFSRYTWVVLLKSKSEV 294

Query: 183  KGKVIEFFNMVENQFSRKVKAIRSDNGTEFNLSDVCRERGIIHQLSCVETLEQNARVERK 362
            K  V  F N+VENQ+  KVK IRSDNG EF L D    +GIIHQ SCV T +QN RVERK
Sbjct: 295  KTHVHNFINLVENQYETKVKCIRSDNGPEFFLRDFFNSKGIIHQTSCVYTPQQNGRVERK 354

Query: 363  HQHLLSVARALMLQASLPKYLWSYAILHAVHLINRMPSVVLNSSSPYQLLHGVLPYLNNL 542
            HQH+L+VARALM Q+ LP   WSYAI HA+ LINR+PS +++  +P++LL+ + P  + L
Sbjct: 355  HQHILNVARALMFQSKLPSNFWSYAIKHAIFLINRVPSPIISHKTPFELLNKIPPDFSML 414

Query: 543  RVFGCLCYTSTNCSGRGKFDSRARKCVFLGYKMHVKGAVTYDVRSREIIVSRNVVFYENI 722
            +VFGCLCY ST+ + R KF+ R+RK +F+G++   KG V  D+ +REI+VSRNV+F+E  
Sbjct: 415  KVFGCLCYASTH-NQRHKFEPRSRKGIFMGFQNGTKGFVILDINTREILVSRNVIFHETS 473

Query: 723  FPYKCNSSRGSVAYLKRWDTGXXXXXXXXXXXXXXXXXXXXXXLSLNGQPSSFPNPPNTP 902
            FP+  ++S  +  ++ +                          L+++  P     PP +P
Sbjct: 474  FPF--HTSAPTSPFITQ------------------------PSLTISPNPDILTTPPTSP 507

Query: 903  ATSQDTPIDTNHLPDXXXXXXXXXXNLRHSTRPHKPPSHLNDYICNHISSINPPRYPIHA 1082
                DT    N  PD               + P  P S  +D I ++ +S +    P H 
Sbjct: 508  ---NDTSPSQNPNPDASASP----------SSPAAPTSPFHDSISSYPTSTDFDIVPHHR 554

Query: 1083 YVSYASLSQPHRA------------YTMSLDAVPEPSSFCEASKHTCWVEAMQQELTALE 1226
              S A +  P R+            Y   L ++    S   + ++ CW EAM  EL ALE
Sbjct: 555  SSSPA-IPPPRRSERDIHPPPYLSEYQYKLPSLKSVQSSTRSIQNPCWREAMTCELKALE 613

Query: 1227 KNQTWIIVDKPANVIPIGCKWVYKVKRKADGSLERYKARLVAKGYTQTEGIDYFDTFSPV 1406
             N TW +V+ P++V PIGCKWV+K+KR  +GS+ERYKARLVAKGY+Q EGIDYF+TFSPV
Sbjct: 614  LNHTWDVVETPSHVRPIGCKWVFKIKRLPNGSIERYKARLVAKGYSQIEGIDYFETFSPV 673

Query: 1407 AKMTTVRTLIALAAIKGWHIHQLDVNNAFLHGQLQEKVYTSIPQGVQISGSNKVCKLLKS 1586
             KMTTVR ++ALA+I  WHI QLDV+NAFLHG L E VY  +PQG+    S+  CKL KS
Sbjct: 674  VKMTTVRVVLALASINQWHIQQLDVSNAFLHGDLLEDVYMELPQGLTGYSSSHSCKLRKS 733

Query: 1587 LYGLKQASRKWYERLTNLLLGLGFKQAHSDHSLFTKITQSSYIALLIYIDDIVLVGDCLS 1766
            LYGLKQ+SRKWYE+L+NLLL  G+KQAHSDHSLFTK   S++ ALLIY+DDIVL G+  +
Sbjct: 734  LYGLKQSSRKWYEKLSNLLLSNGYKQAHSDHSLFTKRHGSAFTALLIYVDDIVLTGNSAA 793

Query: 1767 QLQQIKTVLDHNXXXXXXXXXXXXXXXEAAHSPRGISLCQRQYCLNLLTDTGVLAAKPAS 1946
            ++ +IK +L  N               E AHS +GISLCQR+YCL+LL+D+G+L  KP+S
Sbjct: 794  EITRIKHILHSNFHVKDLGQLKYFLGIEVAHSSKGISLCQRKYCLDLLSDSGMLGCKPSS 853

Query: 1947 TPMAPNSHLHQDDGPLFPDVECXXXXXXXXXXXXXXXPDITFAVQQLSQFLSKPTMTHYK 2126
            TPM     LH D      D                  PDI F+ QQLSQF+SKPT  H+ 
Sbjct: 854  TPMDSTLRLHDDASGYLDDPLPYRRLVGRLVYLTNTRPDIAFSTQQLSQFMSKPTNAHHA 913

Query: 2127 AAQRILHYLKGSPGQGLFFSRSSSLDLQGYTDSNWAGCPDSRRSISGYCFFLGESLIAWR 2306
            AA R+L YLK  PG GLFF R   + + G++D++WA C  SRRSI+GYCFF+G +LI+W+
Sbjct: 914  AAMRVLRYLKSCPGTGLFFPRVCPIQVSGFSDADWATCVASRRSITGYCFFIGNALISWK 973

Query: 2307 SKKQTTVACSSSEAEYRALAFATCELQWIQFLLDDLGIVHSKQPVLYCDNKSALHIAANP 2486
            +KKQTTV+ SSSEAEYRALA ATCELQWI +LL DL I  S+  +LYCDN SALHIAANP
Sbjct: 974  TKKQTTVSRSSSEAEYRALASATCELQWIIYLLRDLHISLSQISLLYCDNTSALHIAANP 1033

Query: 2487 VFHERTKHLEIDCHVVRDKVNSGLMKLQPMPSAHQVADLFTKALLPQSFSHLVTKLQMLN 2666
            VFHERTKHL+IDCH+VR+K  +GLMKL P+PSA Q+AD+FTKAL P +F   ++KLQ+ N
Sbjct: 1034 VFHERTKHLDIDCHIVREKTQAGLMKLLPVPSAKQLADIFTKALPPHAFKLNLSKLQLQN 1093

Query: 2667 IYQSLDCAGI 2696
            I+    C G+
Sbjct: 1094 IFAPPACGGL 1103


>GAU47513.1 hypothetical protein TSUD_138850 [Trifolium subterraneum]
          Length = 1469

 Score =  876 bits (2264), Expect = 0.0
 Identities = 454/929 (48%), Positives = 606/929 (65%), Gaps = 38/929 (4%)
 Frame = +3

Query: 3    RRLPFVVSNNRAENCFDLVHLDVWGPCSLPSIHGYRFFLTIVDDHSRYTWTVLLKGKFEV 182
            ++L + VS N+A   ++L+H D+WGP +  SIH + +FLT VDD+SR+TW  L+K K E 
Sbjct: 540  KKLYYKVSMNKATVPYELIHFDIWGPIASKSIHNHAYFLTAVDDYSRFTWVTLMKHKSEA 599

Query: 183  KGKVIEFFNMVENQFSRKVKAIRSDNGTEFNLSDVCRERGIIHQLSCVETLEQNARVERK 362
            +  VI F  ++E Q + KVK +R+ NG EF +      +GI+HQ SCVET EQN RVERK
Sbjct: 600  RQHVINFIKLIETQHNSKVKIVRTYNGVEFLMPQFYASKGIVHQTSCVETPEQNGRVERK 659

Query: 363  HQHLLSVARALMLQASLPKYLWSYAILHAVHLINRMPSVVLNSSSPYQLLHGVLPYLNNL 542
            HQHLL+V RAL+ QA LPK  WSYA+ HA ++INR+PSVVL++ SPY+LLH VLP + +L
Sbjct: 660  HQHLLNVGRALLFQAHLPKMFWSYAVQHATYIINRVPSVVLSNKSPYELLHNVLPDIKDL 719

Query: 543  RVFGCLCYTSTNCSGRGKFDSRARKCVFLGYKMHVKGAVTYDVR------SREIIVSRNV 704
            +VFG L Y ST  S R K   RARKC+FLGYK  VKG + YD+       SR +    ++
Sbjct: 720  KVFGSLAYASTLQSHRTKLTPRARKCIFLGYKQGVKGTILYDLHSKDIFISRNVTHHDHI 779

Query: 705  VFYE-----NIFPYKCNSSRGSVAYLKRWDTGXXXXXXXXXXXXXXXXXXXXXXLSLNGQ 869
            + Y+     +++ +  +S   +V                               LS + Q
Sbjct: 780  LPYKPQSDHSLWHFHTSSEPTNVPETIHTSFNSDQPVDTSTPHEHVTVIEPTQNLSNDVQ 839

Query: 870  ---------PSSFPNPPNTPATSQDTPID-----------TNHLPDXXXXXXXXXXNLRH 989
                     PS   +  NT  T+ +  ++           +NHL            N  H
Sbjct: 840  LVVPSDIAEPSHISDTCNTQCTNHNDALNQPAQPLSPLLISNHLDQTPALPTSSDSNPTH 899

Query: 990  -STRPHKPPSHLNDYICNHIS------SINPPRYPIHAYVSYASLSQPHRAYTMSLDAVP 1148
             STR    PS+L+DY+CN  +      S +   YPI  Y S  +LS  H A+T+SL    
Sbjct: 900  RSTRLKHAPSYLSDYVCNQSTTSPGTQSSSGSLYPISDYHSLKNLSSIHHAFTVSLTHNT 959

Query: 1149 EPSSFCEASKHTCWVEAMQQELTALEKNQTWIIVDKPANVIPIGCKWVYKVKRKADGSLE 1328
            EP S+ EA K  CW +AM  EL AL K  TW+IVD P+++ PIG KWVYKVK KADG++E
Sbjct: 960  EPKSYLEACKFECWQKAMDDELEALTKTGTWVIVDLPSHIKPIGSKWVYKVKYKADGTIE 1019

Query: 1329 RYKARLVAKGYTQTEGIDYFDTFSPVAKMTTVRTLIALAAIKGWHIHQLDVNNAFLHGQL 1508
            RYKARLVAKGY Q EG+D+FDTFSPVAK+TTVR L+A+A+IKGW +HQLDVNNAFLHG+L
Sbjct: 1020 RYKARLVAKGYNQVEGLDFFDTFSPVAKLTTVRLLLAIASIKGWFLHQLDVNNAFLHGEL 1079

Query: 1509 QEKVYTSIPQGVQISGSNKVCKLLKSLYGLKQASRKWYERLTNLLLGLGFKQAHSDHSLF 1688
            QE VY +IP+GV     N+VCKL KSLYGLKQASRKWYE+LT+LL+  G+ Q+ +D+SLF
Sbjct: 1080 QEDVYMAIPEGVTTLKQNQVCKLQKSLYGLKQASRKWYEKLTSLLISEGYSQSTADYSLF 1139

Query: 1689 TKITQSSYIALLIYIDDIVLVGDCLSQLQQIKTVLDHNXXXXXXXXXXXXXXXEAAHSPR 1868
            T    S + ALLIY+DDI+L G  L+++ +IK +LD +               E A S  
Sbjct: 1140 TLHNASHFTALLIYVDDIILAGTDLNEITRIKKILDTHFKIKDLGVLKYFLGLEVAQSRE 1199

Query: 1869 GISLCQRQYCLNLLTDTGVLAAKPASTPMAPNSHLHQDDGPLFPDVECXXXXXXXXXXXX 2048
            GI++ QR+YCL+LL D+G+L +KPASTP+ P   LH DD   + +V              
Sbjct: 1200 GITISQRKYCLDLLKDSGLLGSKPASTPLDPAVKLHIDDSKPYENVSLYRRLIGKLLYLC 1259

Query: 2049 XXXPDITFAVQQLSQFLSKPTMTHYKAAQRILHYLKGSPGQGLFFSRSSSLDLQGYTDSN 2228
               PDI+FA QQLSQFL KP++ HY AA R++ YLK +PG+GL F R S + L G++DS+
Sbjct: 1260 NTRPDISFATQQLSQFLHKPSVNHYHAACRVIRYLKHNPGRGLLFPRKSDIQLLGFSDSD 1319

Query: 2229 WAGCPDSRRSISGYCFFLGESLIAWRSKKQTTVACSSSEAEYRALAFATCELQWIQFLLD 2408
            WAGC D+R+S SGYCFFLG SLI+W++KKQTT++ SSSEAEYRAL+ ATCEL W+ +L++
Sbjct: 1320 WAGCLDTRKSTSGYCFFLGSSLISWKAKKQTTISRSSSEAEYRALSSATCELIWLTYLMN 1379

Query: 2409 DLGIVHSKQPVLYCDNKSALHIAANPVFHERTKHLEIDCHVVRDKVNSGLMKLQPMPSAH 2588
            DL +  SK PV+YCD++SALHIA+NPVFHERTKHLEIDCH+VR+KV  G+++L P+P+  
Sbjct: 1380 DLKVQCSKLPVIYCDSQSALHIASNPVFHERTKHLEIDCHLVREKVQQGILRLLPIPTEE 1439

Query: 2589 QVADLFTKALLPQSFSHLVTKLQMLNIYQ 2675
            Q+AD  TK+L    F+ L++KL +++IYQ
Sbjct: 1440 QLADCLTKSLAAPKFNELISKLGLIDIYQ 1468


>KYP34298.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Cajanus cajan]
          Length = 1002

 Score =  850 bits (2197), Expect = 0.0
 Identities = 438/902 (48%), Positives = 597/902 (66%), Gaps = 9/902 (0%)
 Frame = +3

Query: 3    RRLPFVVSNNRAENCFDLVHLDVWGPCSLPSIHGYRFFLTIVDDHSRYTWTVLLKGKFEV 182
            R+LPF  S  +A+  FDL+H+D+WGP +  SI G++FFLTIVDD SR+TW   +K K EV
Sbjct: 132  RQLPFSHSVTKADEIFDLLHVDIWGPTTPASIFGHKFFLTIVDDKSRHTWVYFMKHKSEV 191

Query: 183  KGKVIEFFNMVENQFSRKVKAIRSDNGTEFNLSDVCRERGIIHQLSCVETLEQNARVERK 362
               +  F  ++ENQF +KVK +RSDNG EF L +   E+GI+HQ SCVET +QN  VERK
Sbjct: 192  ADHLSSFITLIENQFGKKVKCVRSDNGPEFLLKNFYHEKGILHQTSCVETPQQNGIVERK 251

Query: 363  HQHLLSVARALMLQASLPKYLWSYAILHAVHLINRMPSVVLNSSSPYQLLHGVLPYLNNL 542
            HQH+++VARAL++Q++LPK  W YA+ HAV LINR PS  L +  PY++++  LP L  +
Sbjct: 252  HQHIMTVARALVMQSNLPKSFWFYAVSHAVFLINRQPSSFLENKIPYEIIYNALPDLAGI 311

Query: 543  RVFGCLCYTSTNCSGRGKFDSRARKCVFLGYKMHVKGAVTYDVRSREIIVSRNVVFYENI 722
            +VFGCL Y +T    R KFD R R+CVFLG+K  VKG++ YD+ SRE  +SR+V ++E+I
Sbjct: 312  KVFGCLAYATTLHHNRKKFDPRGRRCVFLGFKPQVKGSILYDLNSRETFLSRHVEYFEHI 371

Query: 723  FPYKCNSSRGSVAYLKRWDTGXXXXXXXXXXXXXXXXXXXXXXLSLNGQPSSFPNPPNTP 902
            FP+   S                                    L L    S   + P  P
Sbjct: 372  FPFLPTSP-----------------------------------LDLTQTISLPRHQPPLP 396

Query: 903  ATSQDTPIDTNHLPDXXXXXXXXXXN-LRHSTRPHKPPSHLNDY----ICNHIS-SINPP 1064
              +  TP+ TN  P             +R STRP K PS+L+DY    +  H S +I+ P
Sbjct: 397  IDTDPTPLSTNTTPTSSPVSVVPPPPFVRKSTRPRKLPSYLHDYHHTLLTTHNSPTISQP 456

Query: 1065 RYPIHAYVSYASLSQPHRAYTMSLDAVPEPSSFCEASKHTCWVEAMQQELTALEKNQTWI 1244
             Y IH ++SY++LS   +A+++S+ ++ EP+S+ EA +   W  A+Q ELTALEKN TWI
Sbjct: 457  LYSIHNHISYSNLSPSQKAFSLSISSIKEPNSYVEAIQDESWKTAIQTELTALEKNNTWI 516

Query: 1245 IVDKPANVIPIGCKWVYKVKRKADGSLERYKARLVAKGYTQTEGIDYFDTFSPVAKMTTV 1424
            +   P N   +GCKWV+K+K  +DG++ER+KARLVAKGYTQTE +DY DTFSPV KMTTV
Sbjct: 517  LTPLPPNKQVVGCKWVFKLKFNSDGTIERHKARLVAKGYTQTETLDYLDTFSPVVKMTTV 576

Query: 1425 RTLIALAAIKGWHIHQLDVNNAFLHGQLQEKVYTSIPQGVQISG--SNKVCKLLKSLYGL 1598
            RTL+A+A  K WHIHQLDVN  FLHG L E+VY + P G+ +S   SN VCKL+KSLYGL
Sbjct: 577  RTLLAVATAKNWHIHQLDVNTTFLHGDLHEEVYMTPPPGLTVSPHQSNCVCKLVKSLYGL 636

Query: 1599 KQASRKWYERLTNLLLGLGFKQAHSDHSLFTKITQSSYIALLIYIDDIVLVGDCLSQLQQ 1778
            KQASR+W  +LT++L+  GFKQ+ +D+SLFTK   + + A+L+Y+DD+VL G+  +++  
Sbjct: 637  KQASRQWNAKLTSVLIDSGFKQSMADYSLFTKQFGAKFTAILVYVDDLVLAGNDPTEINY 696

Query: 1779 IKTVLDHNXXXXXXXXXXXXXXXEAAHSPRGISLCQRQYCLNLLTDTGVLAAKPASTPMA 1958
            IK++LD                 E A S  GI+L QR+Y L+L+ DTG+LA+KP  +PM 
Sbjct: 697  IKSLLDQKFTIKDLGQLKYFLGMEVARSSTGIALYQRKYALDLIEDTGLLASKPCKSPMD 756

Query: 1959 PNSHLHQDDGPLFPDVECXXXXXXXXXXXXXXXPDITFAVQQLSQFLSKPTMTHYKAAQR 2138
             +  LH+  G    D                   DI+F+V  LSQF+ +PT  HY+AA R
Sbjct: 757  HSVKLHKTVGTPLTDPTQYRRLLGRLIYLTNTRADISFSVNHLSQFMDQPTDVHYQAALR 816

Query: 2139 ILHYLKGSPGQGLFFSRSSSLDLQGYTDSNWAGCPDSRRSISGYCFFLGESLIAWRSKKQ 2318
            IL Y+K +PG+GLFF  SS L L+GY+DS+WA C D+RRS++G+ FFLG +LI+W+SKKQ
Sbjct: 817  ILKYVKNAPGKGLFFPSSSDLTLKGYSDSDWASCSDTRRSVTGFSFFLGPALISWKSKKQ 876

Query: 2319 TTVACSSSEAEYRALAFATCELQWIQFLLDDLGIVHSKQP-VLYCDNKSALHIAANPVFH 2495
             TV+ SS+EAEYRALA +TCE QW+ +LL D G+ HS  P VL+CDN+SALHIA+NPVFH
Sbjct: 877  ATVSKSSAEAEYRALAQSTCEAQWLSYLLHDFGL-HSFHPIVLFCDNQSALHIASNPVFH 935

Query: 2496 ERTKHLEIDCHVVRDKVNSGLMKLQPMPSAHQVADLFTKALLPQSFSHLVTKLQMLNIYQ 2675
            ERTK++E+DCH+VR+K+  GL+ L P+ +A Q+AD+FTKAL  + F  ++ KL M +I+ 
Sbjct: 936  ERTKNIELDCHIVREKLQVGLIHLLPISTADQLADVFTKALSLRPFEQIIFKLGMFDIHS 995

Query: 2676 SL 2681
            SL
Sbjct: 996  SL 997


>KYP65734.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Cajanus cajan]
          Length = 1013

 Score =  838 bits (2164), Expect = 0.0
 Identities = 436/917 (47%), Positives = 589/917 (64%), Gaps = 18/917 (1%)
 Frame = +3

Query: 3    RRLPFVVSNNRAENCFDLVHLDVWGPCSLPSIHGYRFFLTIVDDHSRYTWTVLLKGKFEV 182
            +RLP  +SN ++ +  +L+H D+WGP S+PS+ G+++FLT+VDD SR+TW V++K K E 
Sbjct: 129  KRLPHFISNTKSASVIELLHADIWGPYSIPSVFGHKYFLTLVDDFSRFTWIVMMKSKSET 188

Query: 183  KGKVIEFFNMVENQFSRKVKAIRSDNGTEFNLSDVCRERGIIHQLSCVETLEQNARVERK 362
            +  +  F + +E QF  K+K +R+DNG+EF + D+   +GIIHQ SCVET +QN  VERK
Sbjct: 189  RQHLTNFISYIETQFQTKLKCLRTDNGSEFLMHDLFLSKGIIHQGSCVETPQQNGVVERK 248

Query: 363  HQHLLSVARALMLQASLPKYLWSYAILHAVHLINRMPSVVLNSSSPYQLLHGVLPYLNNL 542
            HQH+L+ ARAL  QASLPK  W++AI HAVHLINR+PS +L++ +PYQ LH   P L +L
Sbjct: 249  HQHILNTARALYFQASLPKNFWNFAIQHAVHLINRIPSPLLDNKTPYQALHQRPPILVHL 308

Query: 543  RVFGCLCYTSTNCSGRGKFDSRARKCVFLGYKMHVKGAVTYDVRSREIIVSRNVVFYENI 722
            R FGCL Y ST  + R KF  RA+K V LGYK  VKG + YD+ S E  +SRNV F+E  
Sbjct: 309  RSFGCLAYASTLQAHRTKFQPRAKKSVLLGYKEGVKGYLLYDLHSHEFFMSRNVFFHEFT 368

Query: 723  FPYKCNSSRGSVAYLKRWDTGXXXXXXXXXXXXXXXXXXXXXXLSLNGQPSSFP-----N 887
            FP+   S                                    +++   P S P     +
Sbjct: 369  FPFHTPSQTSLTQ-------------------------PSPTPITIQ-TPISSPYDLDNH 402

Query: 888  PPNTPATSQDTPIDTNHLPDXXXXXXXXXXNLRHSTRPHKPPSHLNDYIC---------N 1040
             P +P +S   P +  H P             RHSTR  +PPS+L DY C         N
Sbjct: 403  VPPSPTSSTSIPPEQPHQP-----LSPAPAPSRHSTRMRQPPSYLKDYHCSLLAPTGRIN 457

Query: 1041 HISSINPPRYPIHAYVSYASLSQPHRAYTMSLDAVPEPSSFCEASKHTCWVEAMQQELTA 1220
              S I+ P + I + ++Y   S  ++ + +S+    EP ++ +ASK+ CW+ AM+ EL A
Sbjct: 458  SFSGISTP-HSISSTLTYDFCSPSYKQFCLSVSTNFEPHTYTQASKYDCWIMAMKTELAA 516

Query: 1221 LEKNQTWIIVDKPANVIPIGCKWVYKVKRKADGSLERYKARLVAKGYTQTEGIDYFDTFS 1400
            L+ NQTW IVD P+   PIGCKWVYK+K  +DGS+ERYKARLVAKGY+QTEG+DY DT+S
Sbjct: 517  LDMNQTWSIVDLPSGKRPIGCKWVYKIKYLSDGSIERYKARLVAKGYSQTEGLDYLDTYS 576

Query: 1401 PVAKMTTVRTLIALAAIKGWHIHQLDVNNAFLHGQLQEKVYTSIPQGVQISGSN----KV 1568
            PVAK+TTVR L+AL AIKGW + QLDVNNAFLHG L E+VY ++P G+ +  S+    KV
Sbjct: 577  PVAKLTTVRVLLALTAIKGWFLEQLDVNNAFLHGDLHEEVYMTLPPGLSVPSSSNTAPKV 636

Query: 1569 CKLLKSLYGLKQASRKWYERLTNLLLGLGFKQAHSDHSLFTKITQSSYIALLIYIDDIVL 1748
            CKL KS+YGLKQASR+WY +L++ L+ +G+  + +DHSLF K + S + ALL+Y+DDI+L
Sbjct: 637  CKLHKSIYGLKQASRQWYSKLSSALISMGYSPSTADHSLFIKSSSSHFTALLVYVDDIIL 696

Query: 1749 VGDCLSQLQQIKTVLDHNXXXXXXXXXXXXXXXEAAHSPRGISLCQRQYCLNLLTDTGVL 1928
             G+   ++  IK  L                  E A S +GI L QR+Y L +L D G L
Sbjct: 697  AGNDKPEIDFIKAQLHKCFKIKDLGNLRYFLGLEIARSNKGILLNQRKYTLEILEDVGFL 756

Query: 1929 AAKPASTPMAPNSHLHQDDGPLFPDVECXXXXXXXXXXXXXXXPDITFAVQQLSQFLSKP 2108
            AAKP+STP  P+  LH D G  + D                  PDI++ VQQLSQF+SKP
Sbjct: 757  AAKPSSTPFNPSLKLHSDHGSPYNDETAYRRLIGRLLYLTTTRPDISYVVQQLSQFVSKP 816

Query: 2109 TMTHYKAAQRILHYLKGSPGQGLFFSRSSSLDLQGYTDSNWAGCPDSRRSISGYCFFLGE 2288
               HY+AA RIL YLKGS G+GLF+S S+SL L  + DS+WA C  SR+SI+G+C FLG 
Sbjct: 817  LDIHYQAATRILRYLKGSHGRGLFYSSSASLKLSAFADSDWASCSISRKSITGFCVFLGS 876

Query: 2289 SLIAWRSKKQTTVACSSSEAEYRALAFATCELQWIQFLLDDLGIVHSKQPVLYCDNKSAL 2468
            SLI+WRSKKQ+T++ SSSEAEYRALA  TCELQW+ +L +DL    +    ++CDNKSA+
Sbjct: 877  SLISWRSKKQSTISRSSSEAEYRALASLTCELQWLHYLFNDLKTSLNFPTSVFCDNKSAI 936

Query: 2469 HIAANPVFHERTKHLEIDCHVVRDKVNSGLMKLQPMPSAHQVADLFTKALLPQSFSHLVT 2648
            ++A NP FHERTKH+EIDCHV+R+K+ S L+ L P+PS+ Q+AD FTK L   SF+  V+
Sbjct: 937  YLAHNPTFHERTKHIEIDCHVIREKIQSRLLHLLPVPSSSQLADAFTKPLHATSFNSFVS 996

Query: 2649 KLQMLNIYQSLDCAGII 2699
            KL + +++ S  C G++
Sbjct: 997  KLGLYDVHSSA-CGGLL 1012


>KYP61022.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1316

 Score =  848 bits (2190), Expect = 0.0
 Identities = 430/900 (47%), Positives = 588/900 (65%), Gaps = 6/900 (0%)
 Frame = +3

Query: 3    RRLPFVVSNNRAENCFDLVHLDVWGPCSLPSIHGYRFFLTIVDDHSRYTWTVLLKGKFEV 182
            ++LPF +S++ A   FDL+H+D+WGPCS+ S+HG+++FLTIVDDH+R+TW  L++ K E 
Sbjct: 451  KKLPFPLSHSYASQPFDLLHMDIWGPCSVTSMHGHKYFLTIVDDHTRFTWLFLMQNKSET 510

Query: 183  KGKVIEFFNMVENQFSRKVKAIRSDNGTEFNLSDVCRERGIIHQLSCVETLEQNARVERK 362
            +  +I F N VE QF + VK IR+DNG EF+++     +GIIHQ +CVET +QN  VERK
Sbjct: 511  RQHIINFINQVETQFDKHVKVIRTDNGLEFSMTQYFSSKGIIHQTTCVETPQQNGIVERK 570

Query: 363  HQHLLSVARALMLQASLPKYLWSYAILHAVHLINRMPSVVLNSSSPYQLLHGVLPYLNNL 542
            HQHLL+V R+L+ QA+LP   W +A++HA  LIN +P+  L++ SP++ L+G    ++ L
Sbjct: 571  HQHLLNVTRSLLFQANLPSIFWCFALMHATFLINCIPTPFLHNISPFEKLYGHPCDISIL 630

Query: 543  RVFGCLCYTSTNCSGRGKFDSRARKCVFLGYKMHVKGAVTYDVRSREIIVSRNVVFYENI 722
             VFGCLCY+ST  S R K D RA  C+FLG+K H KG + +++ +  ++VSRNV+F+E+ 
Sbjct: 631  CVFGCLCYSSTITSHRTKLDPRAHPCIFLGFKPHTKGYLLFNLHTHGLLVSRNVLFHEDH 690

Query: 723  FPYKCNSSRGSVAYLKRWDTGXXXXXXXXXXXXXXXXXXXXXXLSLNGQPSSFPN-PPNT 899
            FP        S +                              + ++     +P  P ++
Sbjct: 691  FPSFTKPHSPSFS----------------------------SPVPIHYNYVDYPTFPSSS 722

Query: 900  PATSQDTPIDTNHLPDXXXXXXXXXXNLRHSTRPHKPPSHLNDYICNHIS-----SINPP 1064
               S D P    H              LR STRP +PP++L D+     S     S    
Sbjct: 723  IVESSDPPTSDQHSSPPP---------LRRSTRPRRPPTYLQDFHGAFTSTSTAHSSTGI 773

Query: 1065 RYPIHAYVSYASLSQPHRAYTMSLDAVPEPSSFCEASKHTCWVEAMQQELTALEKNQTWI 1244
            R+P+H+++SY  LS     Y  S+ +V EP +F EASK   W++AM +E+ ALE N TW+
Sbjct: 774  RHPLHSFLSYDLLSPSFHHYVFSISSVTEPKNFAEASKSDSWLKAMHEEIFALEANNTWV 833

Query: 1245 IVDKPANVIPIGCKWVYKVKRKADGSLERYKARLVAKGYTQTEGIDYFDTFSPVAKMTTV 1424
            +   P +   IGC+WVYKVK KADGS++RYKARLVAKGYTQ EG+D+FDTFSPVAK+TTV
Sbjct: 834  LTTLPPHKTAIGCRWVYKVKHKADGSIDRYKARLVAKGYTQMEGLDFFDTFSPVAKLTTV 893

Query: 1425 RTLIALAAIKGWHIHQLDVNNAFLHGQLQEKVYTSIPQGVQISGSNKVCKLLKSLYGLKQ 1604
            R L++LAAI  WH+ QLDVNNAFLHG L E+VY  +P G+  S   +VC+L +SLYGLKQ
Sbjct: 894  RLLLSLAAINNWHLKQLDVNNAFLHGDLNEEVYMQLPPGLTPSFPGQVCRLQRSLYGLKQ 953

Query: 1605 ASRKWYERLTNLLLGLGFKQAHSDHSLFTKITQSSYIALLIYIDDIVLVGDCLSQLQQIK 1784
            ASR+WY RL++ L+  G+  + SDHSLF K + ++  A+LIY+DDIVL G+ L+++  + 
Sbjct: 954  ASRQWYARLSSFLIQHGYVPSPSDHSLFLKCSPATTTAILIYVDDIVLAGNDLTEIHHLT 1013

Query: 1785 TVLDHNXXXXXXXXXXXXXXXEAAHSPRGISLCQRQYCLNLLTDTGVLAAKPASTPMAPN 1964
            ++L                  E A +  GI LCQR+Y L+LL+DTG+LA+KP STPM  +
Sbjct: 1014 SLLHTTFQIKDLGNLKYFLGLEVARNHTGIHLCQRKYILDLLSDTGMLASKPVSTPMDYS 1073

Query: 1965 SHLHQDDGPLFPDVECXXXXXXXXXXXXXXXPDITFAVQQLSQFLSKPTMTHYKAAQRIL 2144
             HL    G    D                  PDIT+AVQQLSQF+S PT  H +A  RIL
Sbjct: 1074 MHLSASSGTPLTDTAAYRRLVGRLIYLTNTRPDITYAVQQLSQFVSNPTTAHRQALFRIL 1133

Query: 2145 HYLKGSPGQGLFFSRSSSLDLQGYTDSNWAGCPDSRRSISGYCFFLGESLIAWRSKKQTT 2324
             YLKG+PG G+F S +SS+ L+ ++DS+WAGCPD+RRSI+G+  +LG+SLI+W+SKKQ T
Sbjct: 1134 RYLKGTPGSGIFLSVNSSVQLRAFSDSDWAGCPDTRRSITGFAVYLGDSLISWKSKKQIT 1193

Query: 2325 VACSSSEAEYRALAFATCELQWIQFLLDDLGIVHSKQPVLYCDNKSALHIAANPVFHERT 2504
            V+ SSSEAEYRALA  TCELQW+ +LL D  I      +LYCDN+SAL IA+NPVFHERT
Sbjct: 1194 VSRSSSEAEYRALATTTCELQWLSYLLKDFHIDPISPSILYCDNQSALQIASNPVFHERT 1253

Query: 2505 KHLEIDCHVVRDKVNSGLMKLQPMPSAHQVADLFTKALLPQSFSHLVTKLQMLNIYQSLD 2684
            KH+EIDCH+VRDKV++GL+KL P+ S+ Q+AD+ TK L P  F    +KL MLNI+  L+
Sbjct: 1254 KHIEIDCHIVRDKVSTGLLKLLPVSSSQQLADILTKPLSPFVFRSHCSKLGMLNIHSQLE 1313


>GAU31820.1 hypothetical protein TSUD_58210 [Trifolium subterraneum]
          Length = 1409

 Score =  846 bits (2186), Expect = 0.0
 Identities = 444/914 (48%), Positives = 576/914 (63%), Gaps = 13/914 (1%)
 Frame = +3

Query: 3    RRLPFVVSNNRAENCFDLVHLDVWGPCSLPSIHGYRFFLTIVDDHSRYTWTVLLKGKFEV 182
            R+LPF  S + A + FDL+H D+WGP ++ SIHG+++FLTI+DDH+RY W VLLK K EV
Sbjct: 576  RKLPFNSSYSTALHAFDLIHFDIWGPLAVSSIHGHKYFLTILDDHTRYVWIVLLKSKSEV 635

Query: 183  KGKVIEFFNMVENQFSRKVKAIRSDNGTEFNLSDVCRERGIIHQLSCVETLEQNARVERK 362
              +V  F  ++ENQF +  K +R+DNG EF+L      +GIIHQ SCVET +QN RVERK
Sbjct: 636  ASQVQNFIQLIENQFHKTPKIVRADNGLEFSLPSFYASKGIIHQKSCVETRQQNGRVERK 695

Query: 363  HQHLLSVARALMLQASLPKYLWSYAILHAVHLINRMPSVVLNSSSPYQLLHGVLPYLNNL 542
            HQ                            HL+N                          
Sbjct: 696  HQ----------------------------HLLNV------------------------- 702

Query: 543  RVFGCLCYTSTNCSGRGKFDSRARKCVFLGYKMHVKGAVTYDVRSREIIVSRNVVFYENI 722
             VFGCLCY ST    R K D +ARK +FLGY + +KG V  D+ S+E   SR+V F+E+I
Sbjct: 703  -VFGCLCYASTISQNRTKLDPKARKSIFLGYNVGMKGYVLLDLHSKETFTSRHVSFHEHI 761

Query: 723  FPYKCNSSRGSVAYLKRWDTGXXXXXXXXXXXXXXXXXXXXXXLSLNGQPSSFPNPPNT- 899
             PY  NSS  +      WD                                 FP+ P   
Sbjct: 762  LPYTSNSSSET----HNWDY--------------------------------FPSSPTNN 785

Query: 900  --PATSQDTPIDTNHLP----DXXXXXXXXXXNLRHSTRPHKPPSHLNDYICNHISSINP 1061
              P+++ DTP+  N +P                 R STR    PS+L DY+C H S+ + 
Sbjct: 786  ILPSSTSDTPLHIN-IPTAPSSAPCHTPISHPTNRISTRSKTKPSYLQDYVC-HASTASL 843

Query: 1062 PR------YPIHAYVSYASLSQPHRAYTMSLDAVPEPSSFCEASKHTCWVEAMQQELTAL 1223
            P       YPI  Y+SY++LS  H A+ +SL +  EP ++ EASK  CW +AM+ EL AL
Sbjct: 844  PSCSQDKLYPISDYMSYSNLSSNHCAFALSLMSHSEPKTYDEASKFECWNQAMRVELEAL 903

Query: 1224 EKNQTWIIVDKPANVIPIGCKWVYKVKRKADGSLERYKARLVAKGYTQTEGIDYFDTFSP 1403
            EK  TW++VD P  V PIGC+WVY++K  ADGS+ERYKARL+AKGY Q EG+DYFDT+SP
Sbjct: 904  EKTGTWLLVDLPPTVKPIGCRWVYRIKYNADGSIERYKARLIAKGYNQIEGLDYFDTYSP 963

Query: 1404 VAKMTTVRTLIALAAIKGWHIHQLDVNNAFLHGQLQEKVYTSIPQGVQISGSNKVCKLLK 1583
            VAK+TTVRT+IALA+I  W IHQLDVNNAFLHG+LQE VY  +P GV  S  N+VCKL+K
Sbjct: 964  VAKLTTVRTVIALASINNWIIHQLDVNNAFLHGELQEDVYMIVPPGVTCSKPNQVCKLVK 1023

Query: 1584 SLYGLKQASRKWYERLTNLLLGLGFKQAHSDHSLFTKITQSSYIALLIYIDDIVLVGDCL 1763
            SLYGLKQASR+WYERLT  L    + QA SDHSLF K   S+   LL+Y+DD+++ G+ +
Sbjct: 1024 SLYGLKQASRRWYERLTAFLQQHHYIQATSDHSLFLKKNGSTITILLVYVDDVIVAGNSM 1083

Query: 1764 SQLQQIKTVLDHNXXXXXXXXXXXXXXXEAAHSPRGISLCQRQYCLNLLTDTGVLAAKPA 1943
            + +Q IK  L  +               E AHS  GISLCQR+YCL+LL D+G++ +KPA
Sbjct: 1084 TDIQAIKNALHESFKIKDLGILKYFLGIEVAHSKEGISLCQRKYCLDLLDDSGMIESKPA 1143

Query: 1944 STPMAPNSHLHQDDGPLFPDVECXXXXXXXXXXXXXXXPDITFAVQQLSQFLSKPTMTHY 2123
            STP  P++ LHQD    +PD+                 PDITF+ QQLSQFLSKPTM H+
Sbjct: 1144 STPSDPSTKLHQDSSAPYPDIPSYRRLVGRLLYLNATRPDITFSTQQLSQFLSKPTMAHF 1203

Query: 2124 KAAQRILHYLKGSPGQGLFFSRSSSLDLQGYTDSNWAGCPDSRRSISGYCFFLGESLIAW 2303
            KAA R+L YLK  PG+G+   R S + LQG++D++WAGC D+RRSISG CF LG+SLI+W
Sbjct: 1204 KAATRVLRYLKTCPGRGIMMPRDSIIHLQGFSDADWAGCIDTRRSISGQCFLLGKSLISW 1263

Query: 2304 RSKKQTTVACSSSEAEYRALAFATCELQWIQFLLDDLGIVHSKQPVLYCDNKSALHIAAN 2483
            R+KKQ TV+ SSSEAEY+ALA ATCE+QW+ +LL+DL +   K PVL+CDN+SALHIAAN
Sbjct: 1264 RTKKQLTVSRSSSEAEYKALAAATCEMQWLLYLLNDLQVQSIKLPVLFCDNQSALHIAAN 1323

Query: 2484 PVFHERTKHLEIDCHVVRDKVNSGLMKLQPMPSAHQVADLFTKALLPQSFSHLVTKLQML 2663
            PVFH+RTKHLEIDCH+VR+++NSG+MK  P+ + +Q+AD FTK LLPQ F  L++KL+M 
Sbjct: 1324 PVFHKRTKHLEIDCHIVRERLNSGMMKFLPVSTKNQLADFFTKPLLPQPFHILLSKLEMK 1383

Query: 2664 NIYQSLDCAGIIQY 2705
            +IY+   C G++ +
Sbjct: 1384 DIYKPPTCGGLLNH 1397


>KYP42564.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1427

 Score =  845 bits (2183), Expect = 0.0
 Identities = 432/907 (47%), Positives = 583/907 (64%), Gaps = 6/907 (0%)
 Frame = +3

Query: 6    RLPFVVSNNRAENCFDLVHLDVWGPCSLPSIHGYRFFLTIVDDHSRYTWTVLLKGKFEVK 185
            RLPF  S  ++ +CFDLVH+D+WGP ++PSIHG+++FLTIVDD+SR+TW   +K K E +
Sbjct: 531  RLPFPTSTTKSLSCFDLVHMDIWGPLAIPSIHGHKYFLTIVDDYSRHTWIYFMKSKGETR 590

Query: 186  GKVIEFFNMVENQFSRKVKAIRSDNGTEFNLSDVCRERGIIHQLSCVETLEQNARVERKH 365
              +  F + V+ QF++ +K +RSDNG EF +  +    GI+HQ SCVET +QN+ VERKH
Sbjct: 591  NLIQNFISYVQTQFTKHIKVLRSDNGVEFAMDQLYATYGIVHQTSCVETPQQNSVVERKH 650

Query: 366  QHLLSVARALMLQASLPKYLWSYAILHAVHLINRMPSVVLNSSSPYQLLHGVLPYLNNLR 545
            +H+L++ R L+  +++PK  W YA+ HA+HLINR+PS VLN+SSPYQ+L+   P L +L+
Sbjct: 651  RHILNITRTLLFHSNVPKSFWCYAVGHAIHLINRLPSPVLNNSSPYQMLYDKPPTLLDLK 710

Query: 546  VFGCLCYTSTNCSGRGKFDSRARKCVFLGYKMHVKGAVTYDVRSREIIVSRNVVFYENIF 725
            VFG LCY ST   GR K   +A K V+LG K   KG +  D+ +R I VSRNVVFYE+IF
Sbjct: 711  VFGSLCYASTLVQGRSKLAPKATKGVYLGVKQGTKGFLVLDLLTRSIFVSRNVVFYEHIF 770

Query: 726  PYKCNSSRGSVAYLKRWDTGXXXXXXXXXXXXXXXXXXXXXXLSLNGQPSSFPNPPNTPA 905
            P+     +GS                                  L+   + + N  N   
Sbjct: 771  PF---FEKGSTVITNSQQQNDACFDFLYLDSSSHPVTTIDNSSLLDIDSAHYENDLNDID 827

Query: 906  TSQDTPIDTNHLPDXXXXXXXXXXNLRHSTRPHKPPSHLNDYICNHISSINPP-----RY 1070
             S   P +T+               LR STR    P++L DY CN +  + PP     RY
Sbjct: 828  ESAH-PSETSS-----------PSQLRKSTRHKCSPAYLKDYHCNLLIGVPPPEDKHIRY 875

Query: 1071 PIHAYVSYASLSQPHRAYTMSLDAVPEPSSFCEASKHTCWVEAMQQELTALEKNQTWIIV 1250
            P++  +SY SLS  +  Y +S+    EP +F +A K+  WVEAMQ EL ALE N+TW I+
Sbjct: 876  PLNTVLSYDSLSASYSRYVLSITTHVEPHTFNQAVKNKVWVEAMQAELDALEHNKTWTIM 935

Query: 1251 DKPANVIPIGCKWVYKVKRKADGSLERYKARLVAKGYTQTEGIDYFDTFSPVAKMTTVRT 1430
              P    PIG KWVYK+K K+DGS+ERYKARLV KGYTQ +G+DYFDTF+PVAK++TVR 
Sbjct: 936  PLPPGKTPIGSKWVYKIKYKSDGSIERYKARLVVKGYTQIQGLDYFDTFAPVAKLSTVRM 995

Query: 1431 LIALAAIKGWHIHQLDVNNAFLHGQLQEKVYTSIPQGVQISGSNKVCKLLKSLYGLKQAS 1610
            L+A+A+ + W +HQLD+NNAFLHG L E VY  IPQG+ I   N VCKL KSLYGLKQAS
Sbjct: 996  LLAIASCQHWELHQLDINNAFLHGDLLEDVYMEIPQGLNIDKPNHVCKLNKSLYGLKQAS 1055

Query: 1611 RKWYERLTNLLLGLGFKQAHSDHSLFTKITQSSYIALLIYIDDIVLVGDCLSQLQQIKTV 1790
            R+W+ +L++ LL L +KQ+  DHSLFTK   + +  +LIY+DD+++ G    ++  IK  
Sbjct: 1056 RQWFAKLSSFLLSLHYKQSQHDHSLFTKHHGTHFTVILIYVDDLIIAGTDSEEINHIKQS 1115

Query: 1791 LDHNXXXXXXXXXXXXXXXEAAHSPRGISLCQRQYCLNLLTDTGVLAAKPASTPMAPNSH 1970
            LD                 E A S  GISL QR+Y L+LL +T  LA KP  TP+   + 
Sbjct: 1116 LDVKFKIKDLGPLRYFLGLEIARSHLGISLSQRKYTLDLLDETSFLAGKPVLTPIIKGTR 1175

Query: 1971 L-HQDDGPLFPDVECXXXXXXXXXXXXXXXPDITFAVQQLSQFLSKPTMTHYKAAQRILH 2147
            L H  D P + D                  PDI+++VQQLSQFLS P  +HY+AA R+L 
Sbjct: 1176 LSHTTDSP-YEDPAGYRRLIGKLLYLITTRPDISYSVQQLSQFLSCPQQSHYQAAIRVLR 1234

Query: 2148 YLKGSPGQGLFFSRSSSLDLQGYTDSNWAGCPDSRRSISGYCFFLGESLIAWRSKKQTTV 2327
            YLKG+PGQGLF+   S L L+ ++DS+WA CPD+RRS+SGY  FLG SLI+W+ KKQ+T+
Sbjct: 1235 YLKGNPGQGLFYPADSPLQLKAFSDSDWASCPDTRRSLSGYSIFLGNSLISWKCKKQSTI 1294

Query: 2328 ACSSSEAEYRALAFATCELQWIQFLLDDLGIVHSKQPVLYCDNKSALHIAANPVFHERTK 2507
            + SSSEAEYRALA   CE+QW+ +LL D  +  +   +LYCDN+SA HIA+N VFHERTK
Sbjct: 1295 SRSSSEAEYRALAATACEIQWLTYLLQDFSVPFTTPALLYCDNQSARHIASNAVFHERTK 1354

Query: 2508 HLEIDCHVVRDKVNSGLMKLQPMPSAHQVADLFTKALLPQSFSHLVTKLQMLNIYQSLDC 2687
            H+EIDCH+VR+K+ +GL  L P+ S+HQ+AD+ TK L P  F +L++KL ++NIY S  C
Sbjct: 1355 HIEIDCHLVREKLQAGLFHLLPIASSHQLADILTKPLDPSPFQYLLSKLGVINIY-SPAC 1413

Query: 2688 AGIIQYN 2708
             G++ +N
Sbjct: 1414 RGVLDHN 1420


>KYP34293.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1376

 Score =  839 bits (2167), Expect = 0.0
 Identities = 430/900 (47%), Positives = 584/900 (64%), Gaps = 6/900 (0%)
 Frame = +3

Query: 3    RRLPFVVSNNRAENCFDLVHLDVWGPCS-LPSIHGYRFFLTIVDDHSRYTWTVLLKGKFE 179
            R+L F  S++ A   F L+H+D+WGP S + SIHG++FF TIVDD++ +TW  L+  K E
Sbjct: 486  RKLSFSSSHSTASRPFSLLHMDIWGPYSCISSIHGHKFFFTIVDDNTHFTWIFLMINKSE 545

Query: 180  VKGKVIEFFNMVENQFSRKVKAIRSDNGTEFNLSDVCRERGIIHQLSCVETLEQNARVER 359
             +  +  F N++ENQF+ +++ I++DNG EF + +    +GI+HQ +C+ET +QN  VER
Sbjct: 546  TRMHISNFINLIENQFNTRIQTIQTDNGAEFLMQNFFNSKGIVHQTTCIETPQQNGVVER 605

Query: 360  KHQHLLSVARALMLQASLPKYLWSYAILHAVHLINRMPSVVLNSSSPYQLLHGVLPYLNN 539
            KHQHLL+V  AL+  + LP   WSYA+LHA +LINR+ + +L++ +P+Q L+G    +  
Sbjct: 606  KHQHLLNVTHALLFHSKLPYCFWSYALLHATYLINRITTPLLDNKTPFQKLYGQTCDITE 665

Query: 540  LRVFGCLCYTSTNCSGRGKFDSRARKCVFLGYKMHVKGAVTYDVRSREIIVSRNVVFYEN 719
            LRVFGCLCY ST+ + R K D RA  CVFLG+    KG +TYD+ +R I +SRNV FYEN
Sbjct: 666  LRVFGCLCYVSTSTANRKKLDPRAHPCVFLGFSPTTKGYITYDLHTRAITISRNVSFYEN 725

Query: 720  IFPY-KCNSSRGSVAYLKRWDTGXXXXXXXXXXXXXXXXXXXXXXLSLNGQPSSFPNPPN 896
             FP  +  SS  ++  +     G                      +S+   P        
Sbjct: 726  HFPLLQSTSSTSNIPVVSPISFGIHSPSHDL--------------ISILPDPHQHNVTSP 771

Query: 897  TPATSQDTPIDTNHLPDXXXXXXXXXXNLRHSTRPHKPPSHLNDY---ICNHISSINPPR 1067
             PAT+    I                  LR STR   PPS+L DY   + +  ++++P  
Sbjct: 772  NPATTSHDSISLAPYSTTADSLPPNSSPLRRSTRLRNPPSYLQDYHHSLTSTSTNLHPGM 831

Query: 1068 -YPIHAYVSYASLSQPHRAYTMSLDAVPEPSSFCEASKHTCWVEAMQQELTALEKNQTWI 1244
             YPI  Y+SY+ LS   +A+  S+ AV EP S+ EA+KH CW++AM  EL AL+ NQTW 
Sbjct: 832  LYPIEKYISYSRLSNDFQAFVSSISAVSEPHSYAEAAKHDCWLKAMHAELEALKMNQTWT 891

Query: 1245 IVDKPANVIPIGCKWVYKVKRKADGSLERYKARLVAKGYTQTEGIDYFDTFSPVAKMTTV 1424
            +   P +   +GC+W+YK+K  ADGS+ERYKARLVAKGYTQ EG+DY  TFSPVAK+TTV
Sbjct: 892  LTPLPPHKQAVGCRWIYKIKYNADGSIERYKARLVAKGYTQVEGLDYLATFSPVAKLTTV 951

Query: 1425 RTLIALAAIKGWHIHQLDVNNAFLHGQLQEKVYTSIPQGVQISGSNKVCKLLKSLYGLKQ 1604
            R L+ALAA+  WH+ QLDVNNAFLHG L E+VY ++P G++   SN+VCKL KSLYGLKQ
Sbjct: 952  RLLLALAAVFDWHLKQLDVNNAFLHGDLNEEVYMTLPLGMRPEYSNQVCKLQKSLYGLKQ 1011

Query: 1605 ASRKWYERLTNLLLGLGFKQAHSDHSLFTKITQSSYIALLIYIDDIVLVGDCLSQLQQIK 1784
            ASR+W+ +L++ L+  G+ Q+ SDHSLF K + SS  ALLIY+DDIVL G+ LS++Q I 
Sbjct: 1012 ASRQWFAKLSSFLIHHGYHQSASDHSLFMKFSSSSTTALLIYVDDIVLAGNNLSEIQLIT 1071

Query: 1785 TVLDHNXXXXXXXXXXXXXXXEAAHSPRGISLCQRQYCLNLLTDTGVLAAKPASTPMAPN 1964
             +LD                 E A +  GI L QR+Y L++L+D G++A++P STPM   
Sbjct: 1072 GLLDVAFKIKDLGNLKYFLGLEVARNKSGIHLSQRKYVLDILSDCGMMASRPVSTPMDYT 1131

Query: 1965 SHLHQDDGPLFPDVECXXXXXXXXXXXXXXXPDITFAVQQLSQFLSKPTMTHYKAAQRIL 2144
            S L    G    D                  PDI++ V  LSQF+S P+  H +A  RIL
Sbjct: 1132 SRLSASSGTPLADPSSYRRLLGRLIYLTTTRPDISYVVHHLSQFMSAPSTAHSQAIFRIL 1191

Query: 2145 HYLKGSPGQGLFFSRSSSLDLQGYTDSNWAGCPDSRRSISGYCFFLGESLIAWRSKKQTT 2324
             YLK +PG GLFF  +SSL L+ ++DS+WAGC D+RRSI+G+  +LG+SLI+WRSKKQ T
Sbjct: 1192 RYLKQAPGSGLFFPTNSSLHLKAFSDSDWAGCLDTRRSITGFSVYLGDSLISWRSKKQPT 1251

Query: 2325 VACSSSEAEYRALAFATCELQWIQFLLDDLGIVHSKQPVLYCDNKSALHIAANPVFHERT 2504
            V+ SSSEAEYRALA  T ELQW+ +LL DL +   +  +LYCDN+SALHIAAN VFHERT
Sbjct: 1252 VSRSSSEAEYRALATTTSELQWLTYLLHDLHVPVHQPALLYCDNQSALHIAANQVFHERT 1311

Query: 2505 KHLEIDCHVVRDKVNSGLMKLQPMPSAHQVADLFTKALLPQSFSHLVTKLQMLNIYQSLD 2684
            KH++IDCH+VR+K+ SGL+KL P+ S HQ+AD+FTK+L P  F+ L +KL MLN+Y  L+
Sbjct: 1312 KHIDIDCHLVREKLQSGLLKLLPVASPHQLADIFTKSLSPSMFTALYSKLGMLNLYSQLE 1371


>KYP55668.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Cajanus cajan]
          Length = 1136

 Score =  822 bits (2123), Expect = 0.0
 Identities = 421/903 (46%), Positives = 586/903 (64%), Gaps = 9/903 (0%)
 Frame = +3

Query: 3    RRLPFVVSNNRAENCFDLVHLDVWGPCSLPSIHGYRFFLTIVDDHSRYTWTVLLKGKFEV 182
            ++L F +S++ A   FDL+H+D+WGPC + S+HG+++FL IVDDH+R+TW  L++ K E 
Sbjct: 272  KKLSFPLSHSYALQPFDLLHMDIWGPCPVTSMHGHKYFLAIVDDHTRFTWLFLMQNKSET 331

Query: 183  KGKVIEFFNMVENQFSRKVKAIRSDNGTEFNLSDVCRERGIIHQLSCVETLEQNARVERK 362
            +  +I F N VE QF + VK IR+DNG EF+++     +GIIHQ +CVET +QN  VERK
Sbjct: 332  RQHIINFINQVETQFDKNVKVIRTDNGLEFSMTQYFSSKGIIHQTTCVETPQQNGIVERK 391

Query: 363  HQHLLSVARALMLQASLPKYLWSYAILHAVHLINRMPSVVLNSSSPYQLLHGVLPYLNNL 542
            HQHLL+V R+L+ QA+LP   W +A+ HA  LIN +P+  L++ SP++ L+G    ++ L
Sbjct: 392  HQHLLNVTRSLLFQANLPSIFWCFALKHAAFLINCIPTPFLHNISPFEKLYGHPCDISIL 451

Query: 543  RVFGCLCYTSTNCSGRGKFDSRARKCVFLGYKMHVKGAVTYDVRSREIIVSRNVVFYENI 722
            RVFGCLCY+S   S R K D RA  C+FLG+K H KG +  ++ +  ++VS+NV+F+E+ 
Sbjct: 452  RVFGCLCYSSIITSHRTKLDPRAHPCIFLGFKPHTKGYLLVNLHTHGLLVSQNVIFHEDH 511

Query: 723  FPYKCNSSRGSVAYLKRWDTGXXXXXXXXXXXXXXXXXXXXXXLSLNGQPSSFPNPPNTP 902
            FP     +  S +                               S    P ++ + P+ P
Sbjct: 512  FPSFTKPNSPSFS-------------------------------SPVPIPYNYADYPSFP 540

Query: 903  ATS-----QDTPIDTNHLPDXXXXXXXXXXNLRHSTRPHKPPSHLNDYICNHIS----SI 1055
            ++S     +  P D +  P            LR STRP +PP++L D+     S    S 
Sbjct: 541  SSSIVESSEPPPPDQHSSPPP----------LRRSTRPRRPPTYLQDFHGAFTSTGPHSS 590

Query: 1056 NPPRYPIHAYVSYASLSQPHRAYTMSLDAVPEPSSFCEASKHTCWVEAMQQELTALEKNQ 1235
               R+P+H+++SY  LS     Y  S+ +V +P +F EASK   W++AM +E++ALE N 
Sbjct: 591  TGIRHPLHSFISYDRLSPSFHHYVFSISSVTKPKNFVEASKSDSWLKAMHEEISALEANN 650

Query: 1236 TWIIVDKPANVIPIGCKWVYKVKRKADGSLERYKARLVAKGYTQTEGIDYFDTFSPVAKM 1415
            TW++   P +   IGC+WVYKVK KADGS++RYKARLVAKGYTQ EG+D+FDTFSPVAK+
Sbjct: 651  TWVLTTLPPHKTAIGCRWVYKVKHKADGSIDRYKARLVAKGYTQMEGLDFFDTFSPVAKL 710

Query: 1416 TTVRTLIALAAIKGWHIHQLDVNNAFLHGQLQEKVYTSIPQGVQISGSNKVCKLLKSLYG 1595
            TTVR LI+LAAI   H+ QLDVNN+FLHG L E+VY  +P G+  S   +VC+L +SLYG
Sbjct: 711  TTVRLLISLAAIHNCHLKQLDVNNSFLHGDLNEEVYMQLPPGITPSFPGQVCRLQRSLYG 770

Query: 1596 LKQASRKWYERLTNLLLGLGFKQAHSDHSLFTKITQSSYIALLIYIDDIVLVGDCLSQLQ 1775
            LKQASR+WY RL++ L+  G+  + SDHSLF K + +   A+LIY+DDIVL G+ L+++ 
Sbjct: 771  LKQASRQWYARLSSFLIQHGYVPSPSDHSLFLKCSPAITTAILIYVDDIVLAGNDLTEIH 830

Query: 1776 QIKTVLDHNXXXXXXXXXXXXXXXEAAHSPRGISLCQRQYCLNLLTDTGVLAAKPASTPM 1955
             + ++L +                E A +  GI LCQR+Y L+LL+DTG+LA+KP STPM
Sbjct: 831  HLTSLLHNTFQIKDLGNLKYFLGLEVARNHTGIHLCQRKYTLDLLSDTGMLASKPVSTPM 890

Query: 1956 APNSHLHQDDGPLFPDVECXXXXXXXXXXXXXXXPDITFAVQQLSQFLSKPTMTHYKAAQ 2135
              ++HL    G  F D                  P I +AVQQLSQF+S P   H +A  
Sbjct: 891  DYSTHLSASSGTPFTDTAAYRRLVGRLIYLPNTRPAIAYAVQQLSQFVSNPPTAHRQALF 950

Query: 2136 RILHYLKGSPGQGLFFSRSSSLDLQGYTDSNWAGCPDSRRSISGYCFFLGESLIAWRSKK 2315
            RIL YLKG+PG G+F S +SS+ L+ ++D +WAGCPD+RRSI+G+  +LG+SLI+W+SKK
Sbjct: 951  RILCYLKGTPGSGIFLSVNSSVQLRAFSDYDWAGCPDTRRSITGFAVYLGDSLISWKSKK 1010

Query: 2316 QTTVACSSSEAEYRALAFATCELQWIQFLLDDLGIVHSKQPVLYCDNKSALHIAANPVFH 2495
            Q TV+ SSSEAEYRALA  TCELQW+ +LL D  I   +  +LYCDN+ AL IA+NP+FH
Sbjct: 1011 QITVSRSSSEAEYRALATTTCELQWLSYLLKDFHIDLIRPSILYCDNQFALQIASNPIFH 1070

Query: 2496 ERTKHLEIDCHVVRDKVNSGLMKLQPMPSAHQVADLFTKALLPQSFSHLVTKLQMLNIYQ 2675
            ERTKH+EIDCH+VRDKV++GL+KL P+ S+ Q+AD+ TK L P  F    +KL MLNI+ 
Sbjct: 1071 ERTKHIEIDCHIVRDKVSTGLLKLLPVSSSLQLADILTKPLSPFVFHSHYSKLGMLNIHS 1130

Query: 2676 SLD 2684
             L+
Sbjct: 1131 QLE 1133


>KHN01991.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Glycine soja]
          Length = 1311

 Score =  828 bits (2138), Expect = 0.0
 Identities = 420/893 (47%), Positives = 575/893 (64%), Gaps = 9/893 (1%)
 Frame = +3

Query: 3    RRLPFVVSNNRAENCFDLVHLDVWGPCSLPSIHGYRFFLTIVDDHSRYTWTVLLKGKFEV 182
            ++LPF  S + A + F L+H+D+WGPCS PS+HG+++FLTIVDDHSR+TW  L+  K E 
Sbjct: 442  KKLPFSSSTSHASHIFYLLHVDIWGPCSKPSMHGHKYFLTIVDDHSRFTWVHLMHTKAET 501

Query: 183  KGKVIEFFNMVENQFSRKVKAIRSDNGTEFNLSDVCRERGIIHQLSCVETLEQNARVERK 362
            +  ++ F   VE Q+++K+K IRSDNG EF +      +GI+HQ +CVET EQN   ERK
Sbjct: 502  RDIIVNFIASVETQYNKKIKKIRSDNGYEFLMPSFYASKGIMHQTTCVETPEQNGIAERK 561

Query: 363  HQHLLSVARALMLQASLPKYLWSYAILHAVHLINRMPSVVLNSSSPYQLLHGVLPYLNNL 542
            HQHLL+V RAL+ QA+LP   W YA+LHA +L+N +P+  L++ SPY+ LHG LP +++L
Sbjct: 562  HQHLLNVTRALLFQANLPSNFWCYALLHATYLVNCIPTPFLHNVSPYEKLHGHLPEISHL 621

Query: 543  RVFGCLCYTSTNCSGRGKFDSRARKCVFLGYKMHVKGAVTYDVRSREIIVSRNVVFYENI 722
            RVFGCLCY ST  + R K D RA  C+F+G+K   KG + Y++    II SRNVVFYE+ 
Sbjct: 622  RVFGCLCYASTLKANRKKLDPRAHPCIFIGFKASTKGYLVYNLHLHSIITSRNVVFYEDH 681

Query: 723  F---PYKCNSSRGSVAYLKRWDTGXXXXXXXXXXXXXXXXXXXXXXLSLNGQPSSFPNPP 893
            F   P   +S   S   L +                          +S +      P  P
Sbjct: 682  FSQIPETQSSHPESSTILPK-----------------------SFNISPHDPIIEKPPQP 718

Query: 894  NTPATSQDTPIDTNHLPDXXXXXXXXXXNLRHSTRPHKPPSHLNDY---ICNHISSINPP 1064
                T+  TP+      D            R STRP   P++L DY   + +H + ++  
Sbjct: 719  VIQETTDHTPLQLTST-DESAFSQRTKHEPRRSTRPKHAPTYLQDYHHSLSSHDTKVSTS 777

Query: 1065 -RYPIHAYVSYASLSQPHRAYTMSLDAVPEPSSFCEASKHTCWVEAMQQELTALEKNQTW 1241
             RYP+ + +SY+ LS  H+ + MS+ +  EPSS+ EAS++ CW++AM+ EL AL+ N TW
Sbjct: 778  SRYPLSSVLSYSRLSHTHKHFVMSISSTVEPSSYAEASQYDCWIKAMEAELQALQSNNTW 837

Query: 1242 IIVDKPANVIPIGCKWVYKVKRKADGSLERYKARLVAKGYTQTEGIDYFDTFSPVAKMTT 1421
             +   P +   IGC+WVYK+K +ADGS+ERYKARLVAKGYTQ EG+DY   FSPVAK+T 
Sbjct: 838  KLTLLPPHKTAIGCRWVYKIKHRADGSIERYKARLVAKGYTQMEGLDYLYAFSPVAKLTI 897

Query: 1422 VRTLIALAAIKGWHIHQLDVNNAFLHGQLQEKVYTSIPQGVQISGSNKVCKLLKSLYGLK 1601
            VR L+A+ A   WH+ QLDVNNAFLHG+L E+VY  +P G+ +  S  VC+L +SLY LK
Sbjct: 898  VRLLLAMVAFNQWHLRQLDVNNAFLHGELDEEVYMQVPPGLSVPNSQMVCRLQRSLYELK 957

Query: 1602 QASRKWYERLTNLLLGLGFKQAHSDHSLFTKITQSSYIALLIYIDDIVLVGDCLSQLQQI 1781
            QASR+W+ +L+ LL+ LGF+++HSDHSLF + T S   ALL+Y+DDI+L G+  S++Q +
Sbjct: 958  QASRQWFTKLSGLLISLGFEKSHSDHSLFLRFTGSIITALLVYVDDIILTGNSESEIQDV 1017

Query: 1782 KTVLDHNXXXXXXXXXXXXXXXEAAHSPRGISLCQRQYCLNLLTDTGVLAAKPASTPMAP 1961
              +LD                 E A S  GI LCQR+Y L++L+D+G+L  +P  TPM  
Sbjct: 1018 IKLLDQAFKIKDLGNLKYFLGMEIARSSSGIHLCQRKYTLDILSDSGMLGCQPNVTPMDY 1077

Query: 1962 NSHLHQDDG-PLFPDV-ECXXXXXXXXXXXXXXXPDITFAVQQLSQFLSKPTMTHYKAAQ 2135
            ++ L    G PL  +                   PDIT+AVQQLSQ++S PT  H +AA 
Sbjct: 1078 STKLQATAGTPLSTEASSSYRRLIGRLIYLTNTRPDITYAVQQLSQYMSNPTSVHQQAAY 1137

Query: 2136 RILHYLKGSPGQGLFFSRSSSLDLQGYTDSNWAGCPDSRRSISGYCFFLGESLIAWRSKK 2315
            RIL YLKG+ G G+F S + +  L+ ++DS+WAGC DSR+S +G+  +LG S ++W+SKK
Sbjct: 1138 RILRYLKGTSGSGIFLSATGTPQLRAFSDSDWAGCQDSRKSTTGFVIYLGSSPVSWQSKK 1197

Query: 2316 QTTVACSSSEAEYRALAFATCELQWIQFLLDDLGIVHSKQPVLYCDNKSALHIAANPVFH 2495
            Q+TV+ SSSEAEYRA+A  TCELQW+ +LL D     +K   +YCDN+SA+ IA NPVFH
Sbjct: 1198 QSTVSRSSSEAEYRAMATTTCELQWLTYLLQDFRHNFTKPATIYCDNQSAIQIATNPVFH 1257

Query: 2496 ERTKHLEIDCHVVRDKVNSGLMKLQPMPSAHQVADLFTKALLPQSFSHLVTKL 2654
            ERTKH+EIDCH+VR KV SGL+KL P+PS+ Q+AD+FTKAL P  F +L  KL
Sbjct: 1258 ERTKHIEIDCHIVRQKVTSGLLKLLPVPSSLQLADIFTKALPPTVFQNLCNKL 1310


>KYP70921.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1352

 Score =  827 bits (2136), Expect = 0.0
 Identities = 430/907 (47%), Positives = 576/907 (63%), Gaps = 14/907 (1%)
 Frame = +3

Query: 3    RRLPFVVSNNRAENCFDLVHLDVWGPCSLPSIHGYRFFLTIVDDHSRYTWTVLLKGKFEV 182
            ++L F +S++ A   F L+H+D+WGPCS  SIHG+R+FLTIVDDH+RYTW  L+  K + 
Sbjct: 482  KKLSFPLSHSHALQSFALLHIDIWGPCSKTSIHGHRYFLTIVDDHTRYTWVFLMASKADT 541

Query: 183  KGKVIEFFNMVENQFSRKVKAIRSDNGTEFNLSDVCRERGIIHQLSCVETLEQNARVERK 362
               V  F + +ENQF+ +VK IR+DNG EF++++    +GIIHQ +C+ET EQN  VERK
Sbjct: 542  CNCVTNFISHIENQFATRVKVIRTDNGAEFSMNNYFDSKGIIHQTTCIETPEQNRIVERK 601

Query: 363  HQHLLSVARALMLQASLPKYLWSYAILHAVHLINRMPSVVLNSSSPYQLLHGVLPYLNNL 542
            HQHLL+V RAL+ Q++LP   W++A++HA ++IN +P+  L  +SP++ L+G    +  L
Sbjct: 602  HQHLLNVTRALLFQSNLPPTFWNFALMHATYIINCIPTPFLQHTSPFENLNGKPCDITTL 661

Query: 543  RVFGCLCYTSTNCSGRGKFDSRARKCVFLGYKMHVKGAVTYDVRSREIIVSRNVVFYENI 722
            RVFGCLCY ST  + R K D RA  CVFLG++ H KG +T+++ +R I VSRNVVFYEN 
Sbjct: 662  RVFGCLCYVSTLKAHRTKLDPRASPCVFLGFQPHTKGYLTFNLNTRSIEVSRNVVFYENH 721

Query: 723  FPYKCNSSRGSVAYLKRWDTGXXXXXXXXXXXXXXXXXXXXXXLSLNGQPSSFPNPPNTP 902
            FPY    ++ +                                       SS P+ P TP
Sbjct: 722  FPYFTQDTQSA---------------------------------------SSTPSLP-TP 741

Query: 903  ATSQDTPIDTNHLPDXXXXXXXXXXNLRHS----------TRPHKPPSHLNDYICNHIS- 1049
             TS     D N  P           +   S          TR   PPS+L DY     S 
Sbjct: 742  FTSNPMIHDYNFYPPSPSSHPPHSLSSPESPTSSPIPSRPTRSRHPPSYLRDYHMTFTST 801

Query: 1050 --SINPP-RYPIHAYVSYASLSQPHRAYTMSLDAVPEPSSFCEASKHTCWVEAMQQELTA 1220
              S +P  RYP+ + +SY  LS P R + MS+  + EP S+ EASK  CW++AM  E+TA
Sbjct: 802  GPSSSPGIRYPLDSVISYNRLSHPFRHFIMSISLLTEPKSYAEASKSDCWIKAMTDEITA 861

Query: 1221 LEKNQTWIIVDKPANVIPIGCKWVYKVKRKADGSLERYKARLVAKGYTQTEGIDYFDTFS 1400
            LE N TW +   P +   IGCKW+YKVK  ADGS+ER+KARLVAKGYTQ EG+D+ DTF+
Sbjct: 862  LEANNTWTVTSLPPHKTAIGCKWIYKVKHHADGSVERHKARLVAKGYTQLEGLDFLDTFA 921

Query: 1401 PVAKMTTVRTLIALAAIKGWHIHQLDVNNAFLHGQLQEKVYTSIPQGVQISGSNKVCKLL 1580
            PVAK+TTV  L++LAAI  W + QLD+NNAFLHG L E+VY  +P G+  +   +VCKL 
Sbjct: 922  PVAKLTTVHLLLSLAAIHNWFLKQLDINNAFLHGDLNEEVYMHLPPGLTTTTPGQVCKLN 981

Query: 1581 KSLYGLKQASRKWYERLTNLLLGLGFKQAHSDHSLFTKITQSSYIALLIYIDDIVLVGDC 1760
            +SLYGLKQASR+WY RL+  ++  GF  + +DHSLF K T S+  ALL+Y+DDIVL G+ 
Sbjct: 982  RSLYGLKQASRQWYARLSTFIMQQGFHHSSADHSLFLKFTNSACTALLVYVDDIVLAGND 1041

Query: 1761 LSQLQQIKTVLDHNXXXXXXXXXXXXXXXEAAHSPRGISLCQRQYCLNLLTDTGVLAAKP 1940
            L+++ QI  +L                  E A +   I LCQR+Y L++L+DTG+LA  P
Sbjct: 1042 LTEIHQITALLHKTFKIKDLGDLTYFLGLEVARNSIEIHLCQRKYTLDILSDTGMLACCP 1101

Query: 1941 ASTPMAPNSHLHQDDGPLFPDVECXXXXXXXXXXXXXXXPDITFAVQQLSQFLSKPTMTH 2120
            +ST M   + L  D G    D                  PDIT AVQ LSQF SKPT  H
Sbjct: 1102 SSTLMDYKAALSSDTGTPLTDPSAYRQLIGRLIYLTNTHPDITHAVQHLSQFASKPTTYH 1161

Query: 2121 YKAAQRILHYLKGSPGQGLFFSRSSSLDLQGYTDSNWAGCPDSRRSISGYCFFLGESLIA 2300
              AA RIL YLK +PG+G+F S +SSL L+ ++DS+WAGC D+RRSI+G+  +LG SLI+
Sbjct: 1162 QHAAFRILRYLKQAPGRGIFLSANSSLQLKSFSDSDWAGCMDTRRSITGFAVYLGHSLIS 1221

Query: 2301 WRSKKQTTVACSSSEAEYRALAFATCELQWIQFLLDDLGIVHSKQPVLYCDNKSALHIAA 2480
            W+SKKQ TV+ SSSEAEYRALA  +CE+QW+ +LL+D  +   +  +LYCDN+S L IA 
Sbjct: 1222 WKSKKQATVSRSSSEAEYRALASTSCEIQWLTYLLEDFRLQFIRPALLYCDNQSVLQIAC 1281

Query: 2481 NPVFHERTKHLEIDCHVVRDKVNSGLMKLQPMPSAHQVADLFTKALLPQSFSHLVTKLQM 2660
            N VFHERTKH+EIDCH+VR+KV++GL+KL P+ S+ Q+AD++TKAL P  F+ L +KL M
Sbjct: 1282 NQVFHERTKHIEIDCHLVREKVSNGLLKLLPVSSSAQLADIYTKALSPSRFNELNSKLGM 1341

Query: 2661 LNIYQSL 2681
             +IY  L
Sbjct: 1342 SDIYSQL 1348


>KYP43110.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1353

 Score =  823 bits (2127), Expect = 0.0
 Identities = 418/893 (46%), Positives = 567/893 (63%), Gaps = 5/893 (0%)
 Frame = +3

Query: 3    RRLPFVVSNNRAENCFDLVHLDVWGPCSLPSIHGYRFFLTIVDDHSRYTWTVLLKGKFEV 182
            +RLPF  S  ++EN FDL+H+D+WGP S+ SI G+++FLTIVDD SR+TW   +K KFE 
Sbjct: 464  KRLPFPDSLTKSENVFDLIHVDIWGPLSVASIFGHKYFLTIVDDKSRFTWIFFMKNKFET 523

Query: 183  KGKVIEFFNMVENQFSRKVKAIRSDNGTEFNLSDVCRERGIIHQLSCVETLEQNARVERK 362
            K  +  F + V+ QF + +K IR+DNG+EF L D   + GI+HQ SCV T +QN  VERK
Sbjct: 524  KLLLQNFVSFVQTQFQQNIKTIRTDNGSEFLLKDWYAKLGIVHQTSCVNTPQQNGVVERK 583

Query: 363  HQHLLSVARALMLQASLPKYLWSYAILHAVHLINRMPSVVLNSSSPYQLLHGVLPYLNNL 542
            HQH+LS+ARALM Q+++ K  W+YAI HAVHLINR+P+  L  +SPY +L+   P  ++L
Sbjct: 584  HQHILSMARALMFQSNVSKMFWNYAIGHAVHLINRLPTRFLQQNSPYYVLYSEKPDFSHL 643

Query: 543  RVFGCLCYTSTNCSGRGKFDSRARKCVFLGYKMHVKGAVTYDVRSREIIVSRNVVFYENI 722
            +VFGCL + ST    R K + R+RKC+FLGY    KG + YD+++RE  +SR+V FYENI
Sbjct: 644  KVFGCLAFASTLSHNRTKLEPRSRKCMFLGYSSGTKGFIMYDLKTRETFISRDVQFYENI 703

Query: 723  FPYKCNSSRGSVAYLKRWDTGXXXXXXXXXXXXXXXXXXXXXXLSLNGQPSSFPNPPNTP 902
            FP + + S      ++  D                        L       +    P T 
Sbjct: 704  FPLQKDFS------IQSTDGPVVPIAQMPLTSCDPIPSHTHDNLDETEHEHNSSTLPMTN 757

Query: 903  ATSQDTPIDTNHLPDXXXXXXXXXXNLRHSTRPHKPPSHLNDYICNHISS-----INPPR 1067
            +++ D P    ++P+            R S R    P +L DY C   +S      +  R
Sbjct: 758  SSNSDQPNIEINIPEIR----------RTSQRVKNRPGYLQDYHCTLAASKVDQSSSTAR 807

Query: 1068 YPIHAYVSYASLSQPHRAYTMSLDAVPEPSSFCEASKHTCWVEAMQQELTALEKNQTWII 1247
            YPI  Y+ Y S S   +++  ++ ++ EP S+ +A  H CW EA++ EL AL+K +TWI+
Sbjct: 808  YPISDYLPYTSYSAVQQSFVSTISSIIEPRSYQDAINHDCWKEAIRAELDALDKQKTWIL 867

Query: 1248 VDKPANVIPIGCKWVYKVKRKADGSLERYKARLVAKGYTQTEGIDYFDTFSPVAKMTTVR 1427
             D P N   +GC+WV+KVK  ADGS+ERYKARLVAKG+TQ  G+DY DTFSPV +MTT+R
Sbjct: 868  TDLPPNKRAVGCRWVFKVKYHADGSVERYKARLVAKGFTQIPGLDYIDTFSPVVRMTTIR 927

Query: 1428 TLIALAAIKGWHIHQLDVNNAFLHGQLQEKVYTSIPQGVQISGSNKVCKLLKSLYGLKQA 1607
              +A+AA   W +HQLD+N AFLHG L E+VY   P G+ +S  NKVCKL KSLYGLKQ 
Sbjct: 928  VFLAIAAASNWSVHQLDINTAFLHGDLVEEVYMKPPPGLILSSPNKVCKLQKSLYGLKQV 987

Query: 1608 SRKWYERLTNLLLGLGFKQAHSDHSLFTKITQSSYIALLIYIDDIVLVGDCLSQLQQIKT 1787
            SR+W  +LT  L   GF Q+ SD+SLFTK T   +IA+L+Y+DD+++ G   +++ ++K 
Sbjct: 988  SRQWNIKLTETLKLFGFVQSKSDYSLFTKRTNIGFIAILVYVDDLIISGSDETEIMKVKR 1047

Query: 1788 VLDHNXXXXXXXXXXXXXXXEAAHSPRGISLCQRQYCLNLLTDTGVLAAKPASTPMAPNS 1967
            +LD                 E + S +GIS+CQR+Y L LL DTG+LA+KP STPM   +
Sbjct: 1048 LLDKQFSIKDLGQLSYFLGLEFSRSDQGISVCQRKYALELLQDTGLLASKPCSTPMDHTT 1107

Query: 1968 HLHQDDGPLFPDVECXXXXXXXXXXXXXXXPDITFAVQQLSQFLSKPTMTHYKAAQRILH 2147
             LH D   L+ D                  PD+ FAV +LSQF+ +P   H++AA+++L 
Sbjct: 1108 RLHHDPLDLYSDPSSYRRLVGRLIYLTHTRPDLAFAVGKLSQFMHQPNNAHFQAARKVLR 1167

Query: 2148 YLKGSPGQGLFFSRSSSLDLQGYTDSNWAGCPDSRRSISGYCFFLGESLIAWRSKKQTTV 2327
            Y+K +P +GLFF  SS L L GYTDS+WA CPDSRRSISG+CFFLG +L++W+SKKQ  V
Sbjct: 1168 YVKATPTKGLFFPSSSDLKLTGYTDSDWATCPDSRRSISGFCFFLGNALVSWKSKKQNVV 1227

Query: 2328 ACSSSEAEYRALAFATCELQWIQFLLDDLGIVHSKQPVLYCDNKSALHIAANPVFHERTK 2507
            + SSSEAEYRALA   CE QW+  LL D  +       L+CDN+SAL+IAANPVFHERTK
Sbjct: 1228 SRSSSEAEYRALALGVCEAQWLHKLLTDFQLQDLIPISLFCDNQSALYIAANPVFHERTK 1287

Query: 2508 HLEIDCHVVRDKVNSGLMKLQPMPSAHQVADLFTKALLPQSFSHLVTKLQMLN 2666
            H+EIDCH VRD+V +G + L P+ S+ Q+AD+ TK LLP+ F   V KL + N
Sbjct: 1288 HVEIDCHTVRDQVQAGFIHLAPITSSGQLADILTKPLLPKMFQDFVCKLGLSN 1340


>GAU20316.1 hypothetical protein TSUD_337970 [Trifolium subterraneum]
          Length = 1403

 Score =  808 bits (2088), Expect = 0.0
 Identities = 417/896 (46%), Positives = 565/896 (63%), Gaps = 3/896 (0%)
 Frame = +3

Query: 3    RRLPFVVSNNRAENCFDLVHLDVWGPCSLPSIHGYRFFLTIVDDHSRYTWTVLLKGKFEV 182
            +RLPF +S + + + FDLVH+D+WGP ++PS+ GYR+FLT+VDD SRYTWT  +K K E 
Sbjct: 529  KRLPFPLSTHISNSIFDLVHMDIWGPINVPSMLGYRYFLTVVDDKSRYTWTYFMKFKSET 588

Query: 183  KGKVIEFFNMVENQFSRKVKAIRSDNGTEFNLSDVCRERGIIHQLSCVETLEQNARVERK 362
               +  F  MV+ QF   VK IRSDN  EF + D   E  IIHQ SCV T +QN  VERK
Sbjct: 589  SPLIKAFVQMVKTQFQTTVKCIRSDNDNEFLIKDFYAENDIIHQTSCVATPQQNGIVERK 648

Query: 363  HQHLLSVARALMLQASLPKYLWSYAILHAVHLINRMPSVVLNSSSPYQLLHGVLPYLNNL 542
            HQH+L+V RAL+ Q+ LPK  W++A+ HA+H+INR+P+  L   SP+Q+LH  LP +N L
Sbjct: 649  HQHILAVTRALLFQSHLPKTFWAHAVSHAIHIINRIPTTFLTHKSPFQILHNTLPDINFL 708

Query: 543  RVFGCLCYTSTNCSGRGKFDSRARKCVFLGYKMHVKGAVTYDVRSREIIVSRNVVFYENI 722
            +VFG LC+ +T  + R K DSR+RKC+ LG+K  VKG + +D++S+E+ +SR+VVFYE+I
Sbjct: 709  KVFGSLCFATTLQTHRHKLDSRSRKCIHLGFKTGVKGYLLFDLKSKELFLSRDVVFYEHI 768

Query: 723  FPYKCNSSRGSVAYLKRWDTGXXXXXXXXXXXXXXXXXXXXXXLSLNGQPSS--FPNPPN 896
            FPY+ +S   S                                ++ N  PSS   P+  N
Sbjct: 769  FPYQTSSPSSST----------NSTNLSPHPPPLLDDVFTYDSVNTNPPPSSNHLPSTDN 818

Query: 897  TPATSQDTPID-TNHLPDXXXXXXXXXXNLRHSTRPHKPPSHLNDYICNHISSINPPRYP 1073
             P ++  + +  T H              +R STR   PP++L DY CN +S        
Sbjct: 819  VPPSTTTSSLPHTRHSSPVPSPPPPPPPPIRKSTRQTHPPTYLQDYHCNLLS-------- 870

Query: 1074 IHAYVSYASLSQPHRAYTMSLDAVPEPSSFCEASKHTCWVEAMQQELTALEKNQTWIIVD 1253
                         H  +  S +A+   SS    +K+  W  A+Q ELTAL K  TW +V 
Sbjct: 871  -------------HTIHPSSSEALHSSSSKALHNKN--WTNAIQAELTALMKTNTWSLVH 915

Query: 1254 KPANVIPIGCKWVYKVKRKADGSLERYKARLVAKGYTQTEGIDYFDTFSPVAKMTTVRTL 1433
             PA+   IGCKW++K+K  A+G++ERYK RLVAKG+TQTEG+DY DTFSPV KMTT+R L
Sbjct: 916  LPAHKRAIGCKWIFKLKLHANGTIERYKVRLVAKGFTQTEGLDYVDTFSPVVKMTTIRVL 975

Query: 1434 IALAAIKGWHIHQLDVNNAFLHGQLQEKVYTSIPQGVQISGSNKVCKLLKSLYGLKQASR 1613
            +ALAA + WH+ QLDVN AFLHG   E+VY   P G+ +   + VCKL KSLYGLKQASR
Sbjct: 976  LALAASQNWHLFQLDVNTAFLHGDFNEEVYMKPPPGLTLPHPDMVCKLQKSLYGLKQASR 1035

Query: 1614 KWYERLTNLLLGLGFKQAHSDHSLFTKITQSSYIALLIYIDDIVLVGDCLSQLQQIKTVL 1793
            +W  +LT+ LL  G+ Q+ +D+SLFTK + + +  +L+Y+DD+VL G  ++++  +KT+L
Sbjct: 1036 QWNTKLTDTLLHSGYIQSKADYSLFTKHSGAGFTVILVYVDDLVLGGTDMNEINAVKTLL 1095

Query: 1794 DHNXXXXXXXXXXXXXXXEAAHSPRGISLCQRQYCLNLLTDTGVLAAKPASTPMAPNSHL 1973
                              E A S  GISLCQR+Y L+LL D G+  AKP +TPM P+  L
Sbjct: 1096 HDKFSIKDLGVLKYFLGFEVARSKTGISLCQRKYTLDLLEDAGLTGAKPCATPMQPHLQL 1155

Query: 1974 HQDDGPLFPDVECXXXXXXXXXXXXXXXPDITFAVQQLSQFLSKPTMTHYKAAQRILHYL 2153
            H++ G    D                  P+I + V +LSQFLS PT  H  A   +L YL
Sbjct: 1156 HKESGNPLSDPTTYRRLIGRLLYLTHSRPEIAYTVSKLSQFLSAPTDEHMLAGLHVLKYL 1215

Query: 2154 KGSPGQGLFFSRSSSLDLQGYTDSNWAGCPDSRRSISGYCFFLGESLIAWRSKKQTTVAC 2333
            K +PG+GL FS SSSL ++G++DS+W  CPD+RRS +G+CFF+G SL+ W+SKKQ+ V+ 
Sbjct: 1216 KNNPGKGLLFSTSSSLKIKGFSDSDWGACPDTRRSTTGFCFFIGTSLVNWKSKKQSVVSR 1275

Query: 2334 SSSEAEYRALAFATCELQWIQFLLDDLGIVHSKQPVLYCDNKSALHIAANPVFHERTKHL 2513
            SSSEAEYRALA ATCE QW+ +LL D  I H    V+YCDN+SALHIAANPVFHERTKH+
Sbjct: 1276 SSSEAEYRALAQATCEGQWLLYLLKDFHITHDFPMVIYCDNQSALHIAANPVFHERTKHI 1335

Query: 2514 EIDCHVVRDKVNSGLMKLQPMPSAHQVADLFTKALLPQSFSHLVTKLQMLNIYQSL 2681
            EI+CHVVRDK+ +G++ L P+ S  QVA + TK+L P  F+ L +KL + +I+ SL
Sbjct: 1336 EINCHVVRDKIQAGILHLLPVSSKDQVAYILTKSLHPGPFNSLESKLGLFDIHSSL 1391


>KZV25004.1 Cysteine-rich RLK (receptor-like protein kinase) 8 [Dorcoceras
            hygrometricum]
          Length = 1404

 Score =  804 bits (2076), Expect = 0.0
 Identities = 414/897 (46%), Positives = 568/897 (63%), Gaps = 5/897 (0%)
 Frame = +3

Query: 3    RRLPFVVSNNRAENCFDLVHLDVWGPCSLPSIHGYRFFLTIVDDHSRYTWTVLLKGKFEV 182
            RRLP    NN +   F+L+H+D WGP S  S+ G+RFF TIVDDHSRYTW  +LK K +V
Sbjct: 559  RRLPLASRNNISARIFELLHIDTWGPFSQTSVDGFRFFFTIVDDHSRYTWVYMLKSKSDV 618

Query: 183  KGKVIEFFNMVENQFSRKVKAIRSDNGTEFNLSDVCRERGIIHQLSCVETLEQNARVERK 362
                 +F  MV  QF   VK++RSDN  E   +D   + GI H  SCVE  +QN+ VERK
Sbjct: 619  LSIFPDFCRMVSTQFGVTVKSVRSDNAPELGFADFFAKAGITHYHSCVERPQQNSVVERK 678

Query: 363  HQHLLSVARALMLQASLPKYLWSYAILHAVHLINRMPSVVLNSSSPYQLLHGVLPYLNNL 542
            HQH+L+VARAL+ Q+ +P   W   I  +V+LINR PS +L   +P++LLHG LP  ++L
Sbjct: 679  HQHILNVARALLFQSHIPLDYWCDCINTSVYLINRTPSPILAHKTPFELLHGKLPSYSHL 738

Query: 543  RVFGCLCYTSTNCSGRGKFDSRARKCVFLGYKMHVKGAVTYDVRSREIIVSRNVVFYENI 722
            +VFGCLCY ST  S R KF  RA +CVF+GY    KG    ++ + EI +SR+V+F+EN 
Sbjct: 739  KVFGCLCYASTLLSSRHKFSPRAIRCVFIGYPPGYKGYKLLNLETNEIFISRDVIFHENT 798

Query: 723  FPYKCNSSRGSVAYLKRWDTGXXXXXXXXXXXXXXXXXXXXXXLSLNGQPSSFPNPPNTP 902
            FPY+ N+S  S++                              ++    PSS    P+ P
Sbjct: 799  FPYQ-NTSPMSLS-----------------------------DMTFEVSPSS-QITPSIP 827

Query: 903  ATSQDTPIDTNHLPDXXXXXXXXXXNLRHSTRPHKPPSHLNDYICNHISS--INPPRYPI 1076
            A +Q                         ++RPH  PSHL DY C  IS+       +PI
Sbjct: 828  ADAQQHS---------------------RTSRPHNTPSHLRDYHCYSISTPCSTSTAHPI 866

Query: 1077 HAYVSYASLSQPHRAYTMSLDAVPEPSSFCEASKHTCWVEAMQQELTALEKNQTWIIVDK 1256
            H  V+Y+ LS  HRA+  ++ ++ EP++F +A     W +AM +EL ALE N TW IV  
Sbjct: 867  HPLVNYSKLSSSHRAFVQNISSILEPTTFSQAVSLPEWRQAMDEELKALELNHTWSIVSL 926

Query: 1257 PANVIPIGCKWVYKVKRKADGSLERYKARLVAKGYTQTEGIDYFDTFSPVAKMTTVRTLI 1436
            P     +GC+WVYK K  ADGSL+RYKARLVAKGYTQ EG+DY +TFSPVAK+ TVRTL+
Sbjct: 927  PQGKSAVGCRWVYKAKFAADGSLQRYKARLVAKGYTQQEGLDYLETFSPVAKLVTVRTLL 986

Query: 1437 ALAAIKGWHIHQLDVNNAFLHGQLQEKVYTSIPQGVQISG---SNKVCKLLKSLYGLKQA 1607
            ALAA++GW + QLDVNNAFLHG L E+VY ++P G    G   S  VCKL KS+YGLKQA
Sbjct: 987  ALAAVRGWFLIQLDVNNAFLHGDLTEEVYMTLPPGFCSEGELPSRAVCKLHKSIYGLKQA 1046

Query: 1608 SRKWYERLTNLLLGLGFKQAHSDHSLFTKITQSSYIALLIYIDDIVLVGDCLSQLQQIKT 1787
            SR+W+ + ++ LL +GF Q+H+D+SLF +  ++ ++AL++Y+DDIV+  +  +   ++K 
Sbjct: 1047 SRQWFAKFSSTLLSIGFIQSHADNSLFIRSDKNIFLALVVYVDDIVIATNDQNAASELKD 1106

Query: 1788 VLDHNXXXXXXXXXXXXXXXEAAHSPRGISLCQRQYCLNLLTDTGVLAAKPASTPMAPNS 1967
             L+                 E A S RG+S+CQR Y + LLT+ G+L  KP +TPM  N+
Sbjct: 1107 FLNSKFKLKDLGNLKYFLGIEVARSTRGVSICQRNYAMTLLTEAGLLGCKPRTTPMEANT 1166

Query: 1968 HLHQDDGPLFPDVECXXXXXXXXXXXXXXXPDITFAVQQLSQFLSKPTMTHYKAAQRILH 2147
             L QD G +  D                  PD+ FAV +LSQ++S P + H +AA  IL 
Sbjct: 1167 KLAQDSGEMLSDPASYRRLIGRLLYLTITRPDLVFAVNKLSQYVSMPRIPHMEAALNILK 1226

Query: 2148 YLKGSPGQGLFFSRSSSLDLQGYTDSNWAGCPDSRRSISGYCFFLGESLIAWRSKKQTTV 2327
            Y+KG+ GQGLF+S SS L L+ ++D++W  C D+RRS++GYC FLGESLI+WR+KKQ TV
Sbjct: 1227 YVKGTVGQGLFYSSSSDLKLRAFSDADWGACLDTRRSVTGYCVFLGESLISWRAKKQQTV 1286

Query: 2328 ACSSSEAEYRALAFATCELQWIQFLLDDLGIVHSKQPVLYCDNKSALHIAANPVFHERTK 2507
            + SS+EAEYR+LA +TCE+ WI  LL DLG+ +++  VL+CD+++A+HIA+NPVFHERTK
Sbjct: 1287 SRSSAEAEYRSLAASTCEILWIHQLLADLGVTYNEPTVLFCDSQAAVHIASNPVFHERTK 1346

Query: 2508 HLEIDCHVVRDKVNSGLMKLQPMPSAHQVADLFTKALLPQSFSHLVTKLQMLNIYQS 2678
            H++IDCH+VR+KV   ++KL  + S  Q+ADLFTK LLP  F +L+ K+ + NI+ S
Sbjct: 1347 HIDIDCHIVREKVQQKIVKLMHVSSERQLADLFTKPLLPSRFHNLLKKMGVHNIHDS 1403


>GAU51775.1 hypothetical protein TSUD_415620 [Trifolium subterraneum]
          Length = 1234

 Score =  721 bits (1861), Expect = 0.0
 Identities = 377/766 (49%), Positives = 493/766 (64%), Gaps = 16/766 (2%)
 Frame = +3

Query: 423  LWSYAIL-HAVHLINRMPSVVLNSSSPYQLLHGVLPYLNNLRVFGCLCYTSTNCSGRGKF 599
            +W + ++ HA  L+NR+P+ +L++ SPY++L+  LP L NL+VFG L Y ST  + R K 
Sbjct: 471  IWHFRLVQHATFLMNRIPTPLLHNKSPYEMLYNELPDLENLKVFGSLAYASTLQAHRTKL 530

Query: 600  DSRARKCVFLGYKMHVKGAVTYDVRSREIIVSRNVVFYENIFPYKCNSSRGSVAYLKRWD 779
            + R+RKC+FLGYK  VKG + YD+ ++E  +SRNV  ++NI PY   S   +      W 
Sbjct: 531  EPRSRKCIFLGYKQGVKGTILYDLNTKETFISRNVTHHDNILPYPSTSIHPT------WH 584

Query: 780  TGXXXXXXXXXXXXXXXXXXXXXXLSLNGQPSSFPNPPNTPATSQDTPIDTNHLPDXXXX 959
                                    +  +  P   PN P+      D  +  +H P+    
Sbjct: 585  YHTSFSPATSQEQSETIQLPTTDSVESSHDPHIIPNQPSP----NDLIVPISHTPNSPII 640

Query: 960  XXXXXXNLRHSTRPHKP----------PSHLNDYICNHIS-----SINPPRYPIHAYVSY 1094
                  +   +T    P          PS+L DY+CN  +     S     YPI  Y S 
Sbjct: 641  PPNQCSSPDVTTNISPPAMRPIRDKHAPSYLADYVCNQATTPANLSSQGICYPISEYHSL 700

Query: 1095 ASLSQPHRAYTMSLDAVPEPSSFCEASKHTCWVEAMQQELTALEKNQTWIIVDKPANVIP 1274
            A+LSQ H AYT+S+    EPSS+ EA K  CW +AM  EL AL K  TW+IVD P    P
Sbjct: 701  ANLSQTHHAYTLSVTHTTEPSSYSEACKFDCWQKAMNAELEALTKTGTWVIVDLPPLAKP 760

Query: 1275 IGCKWVYKVKRKADGSLERYKARLVAKGYTQTEGIDYFDTFSPVAKMTTVRTLIALAAIK 1454
            IG KWVYKVK KADG++ER+KARLVAKGY Q EG+D+FDTFSPVAK+TTVRTL+A+A+IK
Sbjct: 761  IGSKWVYKVKYKADGTIERHKARLVAKGYNQVEGLDFFDTFSPVAKLTTVRTLLAIASIK 820

Query: 1455 GWHIHQLDVNNAFLHGQLQEKVYTSIPQGVQISGSNKVCKLLKSLYGLKQASRKWYERLT 1634
             WH+HQLDVNNAFLHG L+E VY +IP GV  +   +VCKLLKSLYGLKQASR WYE+LT
Sbjct: 821  QWHLHQLDVNNAFLHGDLEEDVYMTIPDGVPHTKPGQVCKLLKSLYGLKQASRMWYEKLT 880

Query: 1635 NLLLGLGFKQAHSDHSLFTKITQSSYIALLIYIDDIVLVGDCLSQLQQIKTVLDHNXXXX 1814
            +LL+  G+ Q+ +D+SLFT    S++ ALL+Y+DDI+L G   ++  +IK +LD      
Sbjct: 881  SLLIHEGYHQSTADYSLFTLQQGSAFTALLVYVDDIILAGTSTTEFDRIKGILDAQFKIK 940

Query: 1815 XXXXXXXXXXXEAAHSPRGISLCQRQYCLNLLTDTGVLAAKPASTPMAPNSHLHQDDGPL 1994
                       E A S  GI++ QR+YCL+LL D+G+L +KPA+TP+ P   LHQD+G  
Sbjct: 941  DLGTLKYFLGLEVAQSREGINVSQRKYCLDLLKDSGLLGSKPATTPLDPAIKLHQDEGKP 1000

Query: 1995 FPDVECXXXXXXXXXXXXXXXPDITFAVQQLSQFLSKPTMTHYKAAQRILHYLKGSPGQG 2174
            + DV                 PDI +A QQLSQFL KPT+THY AA RI+ YLK SPG+G
Sbjct: 1001 YADVSQYRRLIGKLLYLTNTRPDIAYATQQLSQFLHKPTVTHYNAACRIIRYLKHSPGKG 1060

Query: 2175 LFFSRSSSLDLQGYTDSNWAGCPDSRRSISGYCFFLGESLIAWRSKKQTTVACSSSEAEY 2354
            L FSR   + L G++D++WAGC D+RRS SG+CFF+G SLI+W++KKQTTV+ SSSEAEY
Sbjct: 1061 LTFSRHCDIQLLGFSDADWAGCIDTRRSTSGHCFFIGTSLISWKAKKQTTVSRSSSEAEY 1120

Query: 2355 RALAFATCELQWIQFLLDDLGIVHSKQPVLYCDNKSALHIAANPVFHERTKHLEIDCHVV 2534
            RAL+ ATCEL W+ FLL DL I  SK PVLYCD++SA+HIA+NPVFHERTKHLEIDCH+V
Sbjct: 1121 RALSSATCELIWLLFLLKDLQIECSKPPVLYCDSQSAMHIASNPVFHERTKHLEIDCHLV 1180

Query: 2535 RDKVNSGLMKLQPMPSAHQVADLFTKALLPQSFSHLVTKLQMLNIY 2672
            R+KV  GL++L P+ +  Q+AD  TKAL    FS  + KL + +IY
Sbjct: 1181 REKVQQGLLRLLPISTEDQLADCLTKALPAPKFSSFIHKLGLRDIY 1226


>GAU40777.1 hypothetical protein TSUD_26570 [Trifolium subterraneum]
          Length = 1147

 Score =  709 bits (1830), Expect = 0.0
 Identities = 373/818 (45%), Positives = 505/818 (61%), Gaps = 27/818 (3%)
 Frame = +3

Query: 309  HQLSCVETLEQNARVERKHQHLLSVARALMLQASLPKYLWSYAILHAVHLINRMPSVVLN 488
            HQ SCV T +QN  VERKHQH+L +ARAL+ QA+LPK  WS+A+ HA+H+INR+PS  L 
Sbjct: 344  HQCSCVATPQQNGIVERKHQHILGIARALLFQANLPKIFWSHAVGHAIHIINRLPSPFLK 403

Query: 489  SSSPYQLLHGVLPYLNNLRVFGCLCYTSTNCSGRGKFDSRARKCVFLGYKMHVKGAVTYD 668
              SPYQ+LH  LP ++NL+VFGCL + ST  S R K DSR+R+C+ LG+K  +KG + +D
Sbjct: 404  QKSPYQVLHNHLPDISNLKVFGCLVFVSTLQSNRHKLDSRSRRCISLGFKPGMKGHILFD 463

Query: 669  VRSREIIVSRNVVFYENIFPY-----KCNSSRGSVAYLKRWDTGXXXXXXXXXXXXXXXX 833
            ++S+E+ +SR+VVF+EN+FPY       N    S      +D                  
Sbjct: 464  LKSKELFISRDVVFFENVFPYCDKKHNINEPSSSRVTSDSYDDLTFLHHSHTPPHHTTSS 523

Query: 834  XXXXXXLSLNGQ---PSSFPNPPNT-------PATSQDTPIDTNHLPDXXXXXXXXXXNL 983
                  L+ N Q   P   PNPP+T         TS  + +D++              ++
Sbjct: 524  KNQHITLTDNPQTNHPPYTPNPPSTSIQTNHPTITSPPSNLDSHQPNQIPQPISNTNHHI 583

Query: 984  RHSTRPHKPPSHLNDYICN------------HISSINPPRYPIHAYVSYASLSQPHRAYT 1127
            R S R  KPP +L DY CN             + S +  ++P+  ++SY  +S  H+ + 
Sbjct: 584  RKSLRQSKPPGYLQDYHCNLLTNLLHDSSTDTLQSTSQCKFPLSDFISYDHVSNAHKHFA 643

Query: 1128 MSLDAVPEPSSFCEASKHTCWVEAMQQELTALEKNQTWIIVDKPANVIPIGCKWVYKVKR 1307
            ++L  + EP+S+ EA     W  A+  ELTAL KN+TW +   P++   +GCKWV+K+K 
Sbjct: 644  LNLSTLTEPTSYEEAMNDEHWKNAINAELTALVKNKTWTMTKLPSHKKAVGCKWVFKLKL 703

Query: 1308 KADGSLERYKARLVAKGYTQTEGIDYFDTFSPVAKMTTVRTLIALAAIKGWHIHQLDVNN 1487
             ADGS+ER+KARLVAKG+TQTEGIDY D  SPV KMTTVRT +A+AA + W + QLDVN 
Sbjct: 704  HADGSIERHKARLVAKGFTQTEGIDYTDPLSPVVKMTTVRTFMAIAAAQSWPLFQLDVNT 763

Query: 1488 AFLHGQLQEKVYTSIPQGVQISGSNKVCKLLKSLYGLKQASRKWYERLTNLLLGLGFKQA 1667
            AFLHG L E+                     +SLYGLKQASR+W  +LT  L+  G+ Q+
Sbjct: 764  AFLHGDLNEE---------------------RSLYGLKQASRQWNAKLTETLIASGYCQS 802

Query: 1668 HSDHSLFTKITQSSYIALLIYIDDIVLVGDCLSQLQQIKTVLDHNXXXXXXXXXXXXXXX 1847
             +D+SLFTK T + + A+L+Y+DD+V+ G  ++++  +K +LD                 
Sbjct: 803  KADYSLFTKKTHTGFTAILVYVDDLVMGGTDINEINSLKALLDKKFSIKDLSVLKYFLGF 862

Query: 1848 EAAHSPRGISLCQRQYCLNLLTDTGVLAAKPASTPMAPNSHLHQDDGPLFPDVECXXXXX 2027
            E A S +GISLCQR+Y L+LL DTG+LAA P ST M P   LH++ G    D        
Sbjct: 863  EVARSDKGISLCQRKYTLDLLQDTGLLAAIPCSTLMQPQLQLHKNLGKAISDPTVYRRLI 922

Query: 2028 XXXXXXXXXXPDITFAVQQLSQFLSKPTMTHYKAAQRILHYLKGSPGQGLFFSRSSSLDL 2207
                      P+I++AV +LSQFL  PT  H  A   +L++LK +PGQGLFFS SS L L
Sbjct: 923  EKLLYLTHSRPEISYAVSKLSQFLDCPTDAHMLAGLHVLNFLKNNPGQGLFFSSSSPLTL 982

Query: 2208 QGYTDSNWAGCPDSRRSISGYCFFLGESLIAWRSKKQTTVACSSSEAEYRALAFATCELQ 2387
            +G++DS W  CP +RRS +G+CFFLG SLI W+SKKQT V+ SSSEAEYRALA ATCE Q
Sbjct: 983  KGFSDSGWGACPHTRRSTTGFCFFLGSSLINWKSKKQTVVSRSSSEAEYRALAQATCEGQ 1042

Query: 2388 WIQFLLDDLGIVHSKQPVLYCDNKSALHIAANPVFHERTKHLEIDCHVVRDKVNSGLMKL 2567
            W+ +LL D  I H    ++YCDNKSA+HIAANPVFHERTKH+EIDCHVVRDKV + ++ L
Sbjct: 1043 WLLYLLKDFLIHHDSPILIYCDNKSAMHIAANPVFHERTKHIEIDCHVVRDKVQANVIHL 1102

Query: 2568 QPMPSAHQVADLFTKALLPQSFSHLVTKLQMLNIYQSL 2681
             P+ S  Q+A++FTK+L P  F  L TKL ++++Y SL
Sbjct: 1103 LPVSSKEQIANIFTKSLHPGPFHMLQTKLGIIDMYSSL 1140