BLASTX nr result

ID: Glycyrrhiza36_contig00018534 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza36_contig00018534
         (300 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GAU35358.1 hypothetical protein TSUD_337500 [Trifolium subterran...    67   7e-11
XP_016542632.1 PREDICTED: serine/arginine-rich splicing factor R...    65   2e-10
EOY07655.1 RNA-binding family protein with retrovirus zinc finge...    53   6e-09
KMZ73149.1 Serine/arginine-rich splicing factor RS2Z32 [Zostera ...    58   8e-08
XP_017243145.1 PREDICTED: serine/arginine-rich splicing factor R...    54   3e-06
XP_007205642.1 hypothetical protein PRUPE_ppa009294mg [Prunus pe...    53   6e-06
ONI03232.1 hypothetical protein PRUPE_6G246100 [Prunus persica] ...    53   6e-06
XP_008241808.1 PREDICTED: serine/arginine-rich splicing factor R...    53   6e-06
XP_019159516.1 PREDICTED: serine/arginine-rich splicing factor R...    52   9e-06

>GAU35358.1 hypothetical protein TSUD_337500 [Trifolium subterraneum]
          Length = 317

 Score = 66.6 bits (161), Expect = 7e-11
 Identities = 37/71 (52%), Positives = 38/71 (53%)
 Frame = +2

Query: 86  SVDFGDSFCNVIACFYGHGNNHKLVFSLSVFEGRSIIQFK*LSNDGLTISGNHLRRVRGV 265
           SVDFGDSFCNVIACFYG GNNHKLV                               VR V
Sbjct: 74  SVDFGDSFCNVIACFYGIGNNHKLV-------------------------------VRDV 102

Query: 266 DMKHDFAFVEF 298
           DMKHD+AFVEF
Sbjct: 103 DMKHDYAFVEF 113


>XP_016542632.1 PREDICTED: serine/arginine-rich splicing factor RS2Z33-like isoform
           X1 [Capsicum annuum]
          Length = 338

 Score = 65.5 bits (158), Expect = 2e-10
 Identities = 37/69 (53%), Positives = 43/69 (62%)
 Frame = +2

Query: 92  DFGDSFCNVIACFYGHGNNHKLVFSLSVFEGRSIIQFK*LSNDGLTISGNHLRRVRGVDM 271
           DFG  F NV A FYG        + +   EG+       +SNDGLT+SGNH RRVR VDM
Sbjct: 12  DFGGPFYNVFAYFYGIPTISN--WCIVHLEGQIHELPVLISNDGLTVSGNHFRRVRDVDM 69

Query: 272 KHDFAFVEF 298
           KHD+AFVEF
Sbjct: 70  KHDYAFVEF 78


>EOY07655.1 RNA-binding family protein with retrovirus zinc finger-like domain,
           putative [Theobroma cacao]
          Length = 312

 Score = 52.8 bits (125), Expect(2) = 6e-09
 Identities = 23/29 (79%), Positives = 26/29 (89%)
 Frame = +2

Query: 209 LSNDGLTISGNHLRRVRGVDMKHDFAFVE 295
           LSNDGLT+S N+ RR+R VDMKHDFAFVE
Sbjct: 65  LSNDGLTVSSNNFRRIRDVDMKHDFAFVE 93



 Score = 34.7 bits (78), Expect(2) = 6e-09
 Identities = 20/33 (60%), Positives = 23/33 (69%), Gaps = 3/33 (9%)
 Frame = +1

Query: 1   FNRYGRFLGFWL--NPEVCGGRVA-LVEIPPKC 90
           F+RYGRFLGF L   P V G  +A LVEIP +C
Sbjct: 31  FSRYGRFLGFCLTWRPMVRGSALAELVEIPAQC 63


>KMZ73149.1 Serine/arginine-rich splicing factor RS2Z32 [Zostera marina]
          Length = 328

 Score = 58.2 bits (139), Expect = 8e-08
 Identities = 31/58 (53%), Positives = 39/58 (67%)
 Frame = +2

Query: 125 CFYGHGNNHKLVFSLSVFEGRSIIQFK*LSNDGLTISGNHLRRVRGVDMKHDFAFVEF 298
           C +G      ++FSL + EG      + LS+D LT+SGN+ RRVR VDMKHDFAFVEF
Sbjct: 15  CHHGPVPVILMIFSLDM-EGAKFHTLRYLSDDDLTVSGNNFRRVRDVDMKHDFAFVEF 71


>XP_017243145.1 PREDICTED: serine/arginine-rich splicing factor RS2Z33-like isoform
           X2 [Daucus carota subsp. sativus]
          Length = 302

 Score = 53.5 bits (127), Expect = 3e-06
 Identities = 23/36 (63%), Positives = 30/36 (83%)
 Frame = +2

Query: 191 IIQFK*LSNDGLTISGNHLRRVRGVDMKHDFAFVEF 298
           ++ ++ LSNDGL +SGN  RRVR VDMKHD+AFV+F
Sbjct: 1   MMHYQKLSNDGLIVSGNRFRRVRDVDMKHDYAFVDF 36


>XP_007205642.1 hypothetical protein PRUPE_ppa009294mg [Prunus persica]
          Length = 282

 Score = 52.8 bits (125), Expect = 6e-06
 Identities = 25/35 (71%), Positives = 28/35 (80%)
 Frame = +2

Query: 194 IQFK*LSNDGLTISGNHLRRVRGVDMKHDFAFVEF 298
           +  K LSND LT+SGN LRRVR VDMK +FAFVEF
Sbjct: 1   MHLKYLSNDSLTVSGNRLRRVRDVDMKREFAFVEF 35


>ONI03232.1 hypothetical protein PRUPE_6G246100 [Prunus persica] ONI03233.1
           hypothetical protein PRUPE_6G246100 [Prunus persica]
          Length = 287

 Score = 52.8 bits (125), Expect = 6e-06
 Identities = 25/35 (71%), Positives = 28/35 (80%)
 Frame = +2

Query: 194 IQFK*LSNDGLTISGNHLRRVRGVDMKHDFAFVEF 298
           +  K LSND LT+SGN LRRVR VDMK +FAFVEF
Sbjct: 1   MHLKYLSNDSLTVSGNRLRRVRDVDMKREFAFVEF 35


>XP_008241808.1 PREDICTED: serine/arginine-rich splicing factor RS2Z32 isoform X2
           [Prunus mume]
          Length = 287

 Score = 52.8 bits (125), Expect = 6e-06
 Identities = 25/35 (71%), Positives = 28/35 (80%)
 Frame = +2

Query: 194 IQFK*LSNDGLTISGNHLRRVRGVDMKHDFAFVEF 298
           +  K LSND LT+SGN LRRVR VDMK +FAFVEF
Sbjct: 1   MHLKYLSNDSLTVSGNRLRRVRDVDMKREFAFVEF 35


>XP_019159516.1 PREDICTED: serine/arginine-rich splicing factor RS2Z33-like isoform
           X2 [Ipomoea nil]
          Length = 398

 Score = 52.4 bits (124), Expect = 9e-06
 Identities = 22/30 (73%), Positives = 26/30 (86%)
 Frame = +2

Query: 209 LSNDGLTISGNHLRRVRGVDMKHDFAFVEF 298
           LSNDGL +SGNH RRVR VDMK D+AF++F
Sbjct: 10  LSNDGLIVSGNHFRRVRDVDMKRDYAFIDF 39


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