BLASTX nr result
ID: Glycyrrhiza36_contig00016719
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza36_contig00016719
(461 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_006413952.1 hypothetical protein EUTSA_v10024436mg [Eutrema s... 42 1e-06
EMS55781.1 Multiple RNA-binding domain-containing protein 1 [Tri... 41 2e-06
EMT15961.1 Multiple RNA-binding domain-containing protein 1 [Aeg... 41 2e-06
XP_008661819.1 PREDICTED: uncharacterized protein LOC100279860 i... 42 2e-06
XP_020197944.1 multiple RNA-binding domain-containing protein 1 ... 41 2e-06
NP_001146285.1 uncharacterized protein LOC100279860 [Zea mays] A... 42 2e-06
AQK46047.1 nucleotide binding [Zea mays] 42 2e-06
XP_010240398.1 PREDICTED: multiple RNA-binding domain-containing... 39 4e-06
>XP_006413952.1 hypothetical protein EUTSA_v10024436mg [Eutrema salsugineum]
ESQ55405.1 hypothetical protein EUTSA_v10024436mg
[Eutrema salsugineum]
Length = 815
Score = 41.6 bits (96), Expect(2) = 1e-06
Identities = 28/66 (42%), Positives = 36/66 (54%), Gaps = 12/66 (18%)
Frame = +3
Query: 129 ISRDLQGSVLDTLSNLTTRSCQ------------Q*WTSTKDSCKKYCFAATEKHLRQLF 272
+ RDLQG++LD + L R C+ + TSTK K F AT+K LRQLF
Sbjct: 671 VYRDLQGTLLDEHA-LKLRFCEHKRSDQVGKGSDKDKTSTKLHVKNVAFEATQKELRQLF 729
Query: 273 SSFGQV 290
S FGQ+
Sbjct: 730 SPFGQI 735
Score = 38.1 bits (87), Expect(2) = 1e-06
Identities = 16/25 (64%), Positives = 21/25 (84%)
Frame = +2
Query: 56 YDKWGKNVSVGFGYVEFDSMETAIN 130
++K GK VS G+G+VEFDS+ETA N
Sbjct: 646 HEKGGKQVSKGYGFVEFDSVETATN 670
>EMS55781.1 Multiple RNA-binding domain-containing protein 1 [Triticum urartu]
Length = 1007
Score = 40.8 bits (94), Expect(2) = 2e-06
Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 11/67 (16%)
Frame = +3
Query: 129 ISRDLQGSVLDTLSNL-----------TTRSCQQ*WTSTKDSCKKYCFAATEKHLRQLFS 275
+ +DLQG+VLD + + T + ++ +STK + F ATEK LRQLFS
Sbjct: 846 VCKDLQGTVLDGHALILQLCHGRKDGQTAKKNEKDKSSTKLLVRNVAFEATEKDLRQLFS 905
Query: 276 SFGQVIT 296
FGQ+ T
Sbjct: 906 PFGQIKT 912
Score = 37.7 bits (86), Expect(2) = 2e-06
Identities = 19/31 (61%), Positives = 22/31 (70%)
Frame = +2
Query: 62 KWGKNVSVGFGYVEFDSMETAIN*QRFTGVC 154
K GKNVS+GFG+ EFDS+ETA T VC
Sbjct: 823 KKGKNVSMGFGFAEFDSVETA------TSVC 847
>EMT15961.1 Multiple RNA-binding domain-containing protein 1 [Aegilops tauschii]
Length = 979
Score = 40.8 bits (94), Expect(2) = 2e-06
Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 11/67 (16%)
Frame = +3
Query: 129 ISRDLQGSVLDTLSNL-----------TTRSCQQ*WTSTKDSCKKYCFAATEKHLRQLFS 275
+ +DLQG+VLD + + T + ++ +STK + F ATEK LRQLFS
Sbjct: 818 VCKDLQGTVLDGHALILQLCHGRKDGQTAKKNEKDKSSTKLLVRNVAFEATEKDLRQLFS 877
Query: 276 SFGQVIT 296
FGQ+ T
Sbjct: 878 PFGQIKT 884
Score = 37.7 bits (86), Expect(2) = 2e-06
Identities = 19/31 (61%), Positives = 22/31 (70%)
Frame = +2
Query: 62 KWGKNVSVGFGYVEFDSMETAIN*QRFTGVC 154
K GKNVS+GFG+ EFDS+ETA T VC
Sbjct: 795 KKGKNVSMGFGFAEFDSVETA------TSVC 819
>XP_008661819.1 PREDICTED: uncharacterized protein LOC100279860 isoform X1 [Zea
mays]
Length = 886
Score = 41.6 bits (96), Expect(2) = 2e-06
Identities = 21/31 (67%), Positives = 24/31 (77%)
Frame = +2
Query: 62 KWGKNVSVGFGYVEFDSMETAIN*QRFTGVC 154
K GKNVS+GFG+VEFDS+ETA TGVC
Sbjct: 702 KKGKNVSMGFGFVEFDSVETA------TGVC 726
Score = 37.0 bits (84), Expect(2) = 2e-06
Identities = 26/66 (39%), Positives = 35/66 (53%), Gaps = 12/66 (18%)
Frame = +3
Query: 129 ISRDLQGSVLDTLSNLTTRSCQ------------Q*WTSTKDSCKKYCFAATEKHLRQLF 272
+ +DLQG+VLD + L + C + +STK + F ATEK LRQLF
Sbjct: 725 VCKDLQGTVLDGHA-LILQLCHVKKDGQAAKKNGKDKSSTKLLVRNVAFEATEKDLRQLF 783
Query: 273 SSFGQV 290
S FGQ+
Sbjct: 784 SPFGQI 789
>XP_020197944.1 multiple RNA-binding domain-containing protein 1 [Aegilops tauschii
subsp. tauschii]
Length = 885
Score = 40.8 bits (94), Expect(2) = 2e-06
Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 11/67 (16%)
Frame = +3
Query: 129 ISRDLQGSVLDTLSNL-----------TTRSCQQ*WTSTKDSCKKYCFAATEKHLRQLFS 275
+ +DLQG+VLD + + T + ++ +STK + F ATEK LRQLFS
Sbjct: 724 VCKDLQGTVLDGHALILQLCHGRKDGQTAKKNEKDKSSTKLLVRNVAFEATEKDLRQLFS 783
Query: 276 SFGQVIT 296
FGQ+ T
Sbjct: 784 PFGQIKT 790
Score = 37.7 bits (86), Expect(2) = 2e-06
Identities = 19/31 (61%), Positives = 22/31 (70%)
Frame = +2
Query: 62 KWGKNVSVGFGYVEFDSMETAIN*QRFTGVC 154
K GKNVS+GFG+ EFDS+ETA T VC
Sbjct: 701 KKGKNVSMGFGFAEFDSVETA------TSVC 725
>NP_001146285.1 uncharacterized protein LOC100279860 [Zea mays] ACL53628.1 unknown
[Zea mays] AQK46048.1 nucleotide binding [Zea mays]
Length = 881
Score = 41.6 bits (96), Expect(2) = 2e-06
Identities = 21/31 (67%), Positives = 24/31 (77%)
Frame = +2
Query: 62 KWGKNVSVGFGYVEFDSMETAIN*QRFTGVC 154
K GKNVS+GFG+VEFDS+ETA TGVC
Sbjct: 697 KKGKNVSMGFGFVEFDSVETA------TGVC 721
Score = 37.0 bits (84), Expect(2) = 2e-06
Identities = 26/66 (39%), Positives = 35/66 (53%), Gaps = 12/66 (18%)
Frame = +3
Query: 129 ISRDLQGSVLDTLSNLTTRSCQ------------Q*WTSTKDSCKKYCFAATEKHLRQLF 272
+ +DLQG+VLD + L + C + +STK + F ATEK LRQLF
Sbjct: 720 VCKDLQGTVLDGHA-LILQLCHVKKDGQAAKKNGKDKSSTKLLVRNVAFEATEKDLRQLF 778
Query: 273 SSFGQV 290
S FGQ+
Sbjct: 779 SPFGQI 784
>AQK46047.1 nucleotide binding [Zea mays]
Length = 842
Score = 41.6 bits (96), Expect(2) = 2e-06
Identities = 21/31 (67%), Positives = 24/31 (77%)
Frame = +2
Query: 62 KWGKNVSVGFGYVEFDSMETAIN*QRFTGVC 154
K GKNVS+GFG+VEFDS+ETA TGVC
Sbjct: 658 KKGKNVSMGFGFVEFDSVETA------TGVC 682
Score = 37.0 bits (84), Expect(2) = 2e-06
Identities = 26/66 (39%), Positives = 35/66 (53%), Gaps = 12/66 (18%)
Frame = +3
Query: 129 ISRDLQGSVLDTLSNLTTRSCQ------------Q*WTSTKDSCKKYCFAATEKHLRQLF 272
+ +DLQG+VLD + L + C + +STK + F ATEK LRQLF
Sbjct: 681 VCKDLQGTVLDGHA-LILQLCHVKKDGQAAKKNGKDKSSTKLLVRNVAFEATEKDLRQLF 739
Query: 273 SSFGQV 290
S FGQ+
Sbjct: 740 SPFGQI 745
>XP_010240398.1 PREDICTED: multiple RNA-binding domain-containing protein 1
[Brachypodium distachyon] KQJ84515.1 hypothetical
protein BRADI_5g21380 [Brachypodium distachyon]
Length = 873
Score = 39.3 bits (90), Expect(2) = 4e-06
Identities = 20/31 (64%), Positives = 23/31 (74%)
Frame = +2
Query: 62 KWGKNVSVGFGYVEFDSMETAIN*QRFTGVC 154
K GKNVS+GFG+VEFDS+ETA T VC
Sbjct: 689 KKGKNVSMGFGFVEFDSIETA------TSVC 713
Score = 38.5 bits (88), Expect(2) = 4e-06
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 11/65 (16%)
Frame = +3
Query: 129 ISRDLQGSVLD-----------TLSNLTTRSCQQ*WTSTKDSCKKYCFAATEKHLRQLFS 275
+ +DLQG++LD + T + ++ +STK + F ATEK LRQLFS
Sbjct: 712 VCKDLQGTLLDGHALILQLCHGKKDSKTAKKNEKDKSSTKLLVRNVAFEATEKDLRQLFS 771
Query: 276 SFGQV 290
FGQ+
Sbjct: 772 PFGQL 776