BLASTX nr result

ID: Glycyrrhiza36_contig00013560 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza36_contig00013560
         (461 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_015888463.1 PREDICTED: probable mediator of RNA polymerase II...    73   3e-13
XP_001754804.1 predicted protein [Physcomitrella patens] EDQ8025...    73   1e-12
XP_001771994.1 predicted protein [Physcomitrella patens] EDQ6325...    73   2e-12
XP_010521352.1 PREDICTED: probable mediator of RNA polymerase II...    73   2e-12
ALT31541.1 mediator of RNA polymerase II transcription subunit 3...    70   2e-12
XP_019177933.1 PREDICTED: mediator of RNA polymerase II transcri...    72   2e-12
XP_013452173.1 mediator of RNA polymerase II transcription subun...    72   2e-12
XP_013452174.1 mediator of RNA polymerase II transcription subun...    72   2e-12
GAU18059.1 hypothetical protein TSUD_51700 [Trifolium subterraneum]    72   2e-12
KHG02669.1 rRNA 2'-O-methyltransferase fibrillarin 1 -like prote...    72   2e-12
XP_015888510.1 PREDICTED: mediator of RNA polymerase II transcri...    73   2e-12
XP_003592692.1 mediator of RNA polymerase II transcription subun...    73   2e-12
XP_013452172.1 mediator of RNA polymerase II transcription subun...    72   2e-12
XP_001779689.1 predicted protein [Physcomitrella patens] EDQ5548...    73   2e-12
XP_016181498.1 PREDICTED: mediator of RNA polymerase II transcri...    72   3e-12
XP_016204301.1 PREDICTED: mediator of RNA polymerase II transcri...    72   3e-12
XP_015967377.1 PREDICTED: mediator of RNA polymerase II transcri...    72   3e-12
XP_011030167.1 PREDICTED: probable mediator of RNA polymerase II...    72   3e-12
XP_013452171.1 mediator of RNA polymerase II transcription subun...    72   3e-12
KHG15968.1 rRNA 2'-O-methyltransferase fibrillarin 2 -like prote...    72   3e-12

>XP_015888463.1 PREDICTED: probable mediator of RNA polymerase II transcription
           subunit 36b [Ziziphus jujuba]
          Length = 172

 Score = 72.8 bits (177), Expect = 3e-13
 Identities = 34/36 (94%), Positives = 35/36 (97%)
 Frame = +2

Query: 353 MKGGSKVLVEPHRHEGVFIAKAKEDALVTKNLVPGE 460
           MKGGSKV+VEPHRHEGVFIAK KEDALVTKNLVPGE
Sbjct: 1   MKGGSKVVVEPHRHEGVFIAKGKEDALVTKNLVPGE 36


>XP_001754804.1 predicted protein [Physcomitrella patens] EDQ80258.1 predicted
           protein [Physcomitrella patens]
          Length = 261

 Score = 72.8 bits (177), Expect = 1e-12
 Identities = 32/36 (88%), Positives = 36/36 (100%)
 Frame = +2

Query: 353 MKGGSKVLVEPHRHEGVFIAKAKEDALVTKNLVPGE 460
           MKGG+KV++EPHRHEGVF+AKAKEDALVTKNLVPGE
Sbjct: 15  MKGGAKVIIEPHRHEGVFVAKAKEDALVTKNLVPGE 50


>XP_001771994.1 predicted protein [Physcomitrella patens] EDQ63255.1 predicted
           protein [Physcomitrella patens]
          Length = 270

 Score = 72.8 bits (177), Expect = 2e-12
 Identities = 32/36 (88%), Positives = 36/36 (100%)
 Frame = +2

Query: 353 MKGGSKVLVEPHRHEGVFIAKAKEDALVTKNLVPGE 460
           MKGG+KV++EPHRHEGVF+AKAKEDALVTKNLVPGE
Sbjct: 24  MKGGAKVIIEPHRHEGVFVAKAKEDALVTKNLVPGE 59


>XP_010521352.1 PREDICTED: probable mediator of RNA polymerase II transcription
           subunit 36b [Tarenaya hassleriana]
          Length = 306

 Score = 73.2 bits (178), Expect = 2e-12
 Identities = 34/36 (94%), Positives = 35/36 (97%)
 Frame = +2

Query: 353 MKGGSKVLVEPHRHEGVFIAKAKEDALVTKNLVPGE 460
           MKGGSKV+VEPHRHEGVFIAK KEDALVTKNLVPGE
Sbjct: 60  MKGGSKVIVEPHRHEGVFIAKGKEDALVTKNLVPGE 95


>ALT31541.1 mediator of RNA polymerase II transcription subunit 36-like
           protein, partial [Rehmannia glutinosa]
          Length = 136

 Score = 70.1 bits (170), Expect = 2e-12
 Identities = 32/36 (88%), Positives = 34/36 (94%)
 Frame = +2

Query: 353 MKGGSKVLVEPHRHEGVFIAKAKEDALVTKNLVPGE 460
           MKGGSKV+VEPHRHEGVFIAK KEDAL TKN+VPGE
Sbjct: 1   MKGGSKVVVEPHRHEGVFIAKGKEDALCTKNMVPGE 36


>XP_019177933.1 PREDICTED: mediator of RNA polymerase II transcription subunit 36a
           [Ipomoea nil]
          Length = 235

 Score = 72.0 bits (175), Expect = 2e-12
 Identities = 33/36 (91%), Positives = 35/36 (97%)
 Frame = +2

Query: 353 MKGGSKVLVEPHRHEGVFIAKAKEDALVTKNLVPGE 460
           MKGGSKV+VEPHRHEGVFIAK KEDALVTKN+VPGE
Sbjct: 20  MKGGSKVVVEPHRHEGVFIAKGKEDALVTKNMVPGE 55


>XP_013452173.1 mediator of RNA polymerase II transcription subunit 36a [Medicago
           truncatula] KEH26201.1 mediator of RNA polymerase II
           transcription subunit 36a [Medicago truncatula]
          Length = 261

 Score = 72.4 bits (176), Expect = 2e-12
 Identities = 33/36 (91%), Positives = 35/36 (97%)
 Frame = +2

Query: 353 MKGGSKVLVEPHRHEGVFIAKAKEDALVTKNLVPGE 460
           MKGGSKV+VEPHRHEG+FIAK KEDALVTKNLVPGE
Sbjct: 65  MKGGSKVVVEPHRHEGIFIAKGKEDALVTKNLVPGE 100


>XP_013452174.1 mediator of RNA polymerase II transcription subunit 36a [Medicago
           truncatula] KEH26202.1 mediator of RNA polymerase II
           transcription subunit 36a [Medicago truncatula]
          Length = 262

 Score = 72.4 bits (176), Expect = 2e-12
 Identities = 33/36 (91%), Positives = 35/36 (97%)
 Frame = +2

Query: 353 MKGGSKVLVEPHRHEGVFIAKAKEDALVTKNLVPGE 460
           MKGGSKV+VEPHRHEG+FIAK KEDALVTKNLVPGE
Sbjct: 65  MKGGSKVVVEPHRHEGIFIAKGKEDALVTKNLVPGE 100


>GAU18059.1 hypothetical protein TSUD_51700 [Trifolium subterraneum]
          Length = 220

 Score = 71.6 bits (174), Expect = 2e-12
 Identities = 32/36 (88%), Positives = 35/36 (97%)
 Frame = +2

Query: 353 MKGGSKVLVEPHRHEGVFIAKAKEDALVTKNLVPGE 460
           MKGG+KV+VEPHRHEG+FIAK KEDALVTKNLVPGE
Sbjct: 66  MKGGNKVIVEPHRHEGIFIAKGKEDALVTKNLVPGE 101


>KHG02669.1 rRNA 2'-O-methyltransferase fibrillarin 1 -like protein [Gossypium
           arboreum]
          Length = 244

 Score = 72.0 bits (175), Expect = 2e-12
 Identities = 32/36 (88%), Positives = 35/36 (97%)
 Frame = +2

Query: 353 MKGGSKVLVEPHRHEGVFIAKAKEDALVTKNLVPGE 460
           MKGGSKV+VEPHRHEGVF+AK KEDALVTKN+VPGE
Sbjct: 59  MKGGSKVIVEPHRHEGVFVAKGKEDALVTKNMVPGE 94


>XP_015888510.1 PREDICTED: mediator of RNA polymerase II transcription subunit
           36a-like [Ziziphus jujuba]
          Length = 307

 Score = 72.8 bits (177), Expect = 2e-12
 Identities = 34/36 (94%), Positives = 35/36 (97%)
 Frame = +2

Query: 353 MKGGSKVLVEPHRHEGVFIAKAKEDALVTKNLVPGE 460
           MKGGSKV+VEPHRHEGVFIAK KEDALVTKNLVPGE
Sbjct: 63  MKGGSKVVVEPHRHEGVFIAKGKEDALVTKNLVPGE 98


>XP_003592692.1 mediator of RNA polymerase II transcription subunit 36a [Medicago
           truncatula] AES62943.1 mediator of RNA polymerase II
           transcription subunit 36a [Medicago truncatula]
           AFK35348.1 unknown [Medicago truncatula]
          Length = 313

 Score = 72.8 bits (177), Expect = 2e-12
 Identities = 33/36 (91%), Positives = 35/36 (97%)
 Frame = +2

Query: 353 MKGGSKVLVEPHRHEGVFIAKAKEDALVTKNLVPGE 460
           MKGGSKV+VEPHRHEG+FIAK KEDALVTKNLVPGE
Sbjct: 69  MKGGSKVIVEPHRHEGIFIAKGKEDALVTKNLVPGE 104


>XP_013452172.1 mediator of RNA polymerase II transcription subunit 36a [Medicago
           truncatula] KEH26200.1 mediator of RNA polymerase II
           transcription subunit 36a [Medicago truncatula]
          Length = 277

 Score = 72.4 bits (176), Expect = 2e-12
 Identities = 33/36 (91%), Positives = 35/36 (97%)
 Frame = +2

Query: 353 MKGGSKVLVEPHRHEGVFIAKAKEDALVTKNLVPGE 460
           MKGGSKV+VEPHRHEG+FIAK KEDALVTKNLVPGE
Sbjct: 33  MKGGSKVVVEPHRHEGIFIAKGKEDALVTKNLVPGE 68


>XP_001779689.1 predicted protein [Physcomitrella patens] EDQ55485.1 predicted
           protein [Physcomitrella patens]
          Length = 319

 Score = 72.8 bits (177), Expect = 2e-12
 Identities = 32/36 (88%), Positives = 36/36 (100%)
 Frame = +2

Query: 353 MKGGSKVLVEPHRHEGVFIAKAKEDALVTKNLVPGE 460
           MKGG+KV++EPHRHEGVF+AKAKEDALVTKNLVPGE
Sbjct: 73  MKGGAKVIIEPHRHEGVFVAKAKEDALVTKNLVPGE 108


>XP_016181498.1 PREDICTED: mediator of RNA polymerase II transcription subunit
           36a-like [Arachis ipaensis]
          Length = 302

 Score = 72.4 bits (176), Expect = 3e-12
 Identities = 33/36 (91%), Positives = 35/36 (97%)
 Frame = +2

Query: 353 MKGGSKVLVEPHRHEGVFIAKAKEDALVTKNLVPGE 460
           MKGGSKV+VEPHRHEG+FIAK KEDALVTKNLVPGE
Sbjct: 58  MKGGSKVVVEPHRHEGIFIAKGKEDALVTKNLVPGE 93


>XP_016204301.1 PREDICTED: mediator of RNA polymerase II transcription subunit
           36a-like [Arachis ipaensis]
          Length = 302

 Score = 72.4 bits (176), Expect = 3e-12
 Identities = 33/36 (91%), Positives = 35/36 (97%)
 Frame = +2

Query: 353 MKGGSKVLVEPHRHEGVFIAKAKEDALVTKNLVPGE 460
           MKGGSKV+VEPHRHEG+FIAK KEDALVTKNLVPGE
Sbjct: 58  MKGGSKVVVEPHRHEGIFIAKGKEDALVTKNLVPGE 93


>XP_015967377.1 PREDICTED: mediator of RNA polymerase II transcription subunit
           36a-like [Arachis duranensis]
          Length = 302

 Score = 72.4 bits (176), Expect = 3e-12
 Identities = 33/36 (91%), Positives = 35/36 (97%)
 Frame = +2

Query: 353 MKGGSKVLVEPHRHEGVFIAKAKEDALVTKNLVPGE 460
           MKGGSKV+VEPHRHEG+FIAK KEDALVTKNLVPGE
Sbjct: 58  MKGGSKVVVEPHRHEGIFIAKGKEDALVTKNLVPGE 93


>XP_011030167.1 PREDICTED: probable mediator of RNA polymerase II transcription
           subunit 36b isoform X4 [Populus euphratica]
          Length = 269

 Score = 72.0 bits (175), Expect = 3e-12
 Identities = 33/36 (91%), Positives = 35/36 (97%)
 Frame = +2

Query: 353 MKGGSKVLVEPHRHEGVFIAKAKEDALVTKNLVPGE 460
           MKGGSKV+VEPHRHEGVFIAK KEDALVTKN+VPGE
Sbjct: 65  MKGGSKVVVEPHRHEGVFIAKGKEDALVTKNMVPGE 100


>XP_013452171.1 mediator of RNA polymerase II transcription subunit 36a [Medicago
           truncatula] KEH26199.1 mediator of RNA polymerase II
           transcription subunit 36a [Medicago truncatula]
          Length = 309

 Score = 72.4 bits (176), Expect = 3e-12
 Identities = 33/36 (91%), Positives = 35/36 (97%)
 Frame = +2

Query: 353 MKGGSKVLVEPHRHEGVFIAKAKEDALVTKNLVPGE 460
           MKGGSKV+VEPHRHEG+FIAK KEDALVTKNLVPGE
Sbjct: 65  MKGGSKVVVEPHRHEGIFIAKGKEDALVTKNLVPGE 100


>KHG15968.1 rRNA 2'-O-methyltransferase fibrillarin 2 -like protein [Gossypium
           arboreum]
          Length = 247

 Score = 71.6 bits (174), Expect = 3e-12
 Identities = 32/36 (88%), Positives = 35/36 (97%)
 Frame = +2

Query: 353 MKGGSKVLVEPHRHEGVFIAKAKEDALVTKNLVPGE 460
           MKGGSKV+VEPHRHEGVF+AK KEDALVTKN+VPGE
Sbjct: 61  MKGGSKVVVEPHRHEGVFVAKGKEDALVTKNMVPGE 96


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