BLASTX nr result

ID: Glycyrrhiza36_contig00011844 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza36_contig00011844
         (707 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AAA84682.1 unknown protein (chloroplast) [Nicotiana tabacum] prf...    57   3e-07
AIK21304.1 ATP synthase CF0 subunit I (chloroplast) [Lathyrus sa...    59   6e-07
AIJ28139.1 ATP synthase CF0 subunit I (chloroplast) [Trifolium m...    57   3e-06

>AAA84682.1 unknown protein (chloroplast) [Nicotiana tabacum] prf||1102209F ORF
           6
          Length = 79

 Score = 56.6 bits (135), Expect = 3e-07
 Identities = 35/78 (44%), Positives = 40/78 (51%)
 Frame = +1

Query: 22  MKVDSLSIHFKMSMISSRTKHESFNSFGSHTQFLIGNFPIFIM**VYPLFXXXXXXXXXX 201
           MKVD  SI F+ S+I SRTKHESF+SFGSH Q L  N  IF      P+F          
Sbjct: 1   MKVDYFSIPFQNSIIPSRTKHESFDSFGSHAQLLKVNSHIFFYECNEPIFSSLFIFQKDI 60

Query: 202 XXXXXXXXLEDSSDQTNN 255
                    EDSSD+  N
Sbjct: 61  ETNVIPKYSEDSSDKIKN 78


>AIK21304.1 ATP synthase CF0 subunit I (chloroplast) [Lathyrus sativus]
          Length = 204

 Score = 58.5 bits (140), Expect = 6e-07
 Identities = 25/27 (92%), Positives = 26/27 (96%)
 Frame = -1

Query: 707 VFFGKGVCASCLFQRIDWIQPTALFWL 627
           +FFGKGVCASCLFQRIDWIQPTALF L
Sbjct: 42  IFFGKGVCASCLFQRIDWIQPTALFLL 68


>AIJ28139.1 ATP synthase CF0 subunit I (chloroplast) [Trifolium meduseum]
          Length = 204

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 24/27 (88%), Positives = 25/27 (92%)
 Frame = -1

Query: 707 VFFGKGVCASCLFQRIDWIQPTALFWL 627
           +FFGKGVCA CLFQRIDWIQPTALF L
Sbjct: 42  IFFGKGVCAGCLFQRIDWIQPTALFSL 68


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