BLASTX nr result
ID: Glycyrrhiza36_contig00011282
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza36_contig00011282
(257 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ADG85311.1 RNA polymerase beta subunit, partial (chloroplast) [S... 159 8e-49
BAC77575.1 RNA polymerase beta subunit, partial (chloroplast) [N... 158 2e-48
XP_007141910.1 hypothetical protein PHAVU_008G236100g, partial [... 160 3e-48
ADG85308.1 RNA polymerase beta subunit, partial (chloroplast) [S... 157 5e-48
BAC77552.1 RNA polymerase beta subunit, partial (chloroplast) [N... 160 1e-47
ADG85307.1 RNA polymerase beta subunit, partial (chloroplast) [S... 156 1e-47
ADG85310.1 RNA polymerase beta subunit, partial (chloroplast) [S... 154 5e-47
CAC51380.1 RNA polymerase beta subunit, partial (chloroplast) [N... 155 3e-46
AMC32300.1 RNA polymerase beta subunit (chloroplast) [Glycyrrhiz... 166 7e-46
YP_009161288.1 RpoB (chloroplast) [Wisteria floribunda] YP_00923... 166 7e-46
YP_009027272.1 RNA polymerase beta subunit (chloroplast) [Glycyr... 166 7e-46
ADG85309.1 RNA polymerase beta subunit, partial (chloroplast) [S... 151 9e-46
CAI99086.1 RNA polymerase beta subunit, partial (chloroplast) [A... 155 1e-45
CAI99072.1 RNA polymerase beta subunit, partial (chloroplast) [A... 155 2e-45
YP_009334189.1 RpoB (chloroplast) [Caragana microphylla] APL9739... 164 3e-45
YP_009242953.1 RNA polymerase beta subunit (chloroplast) [Astrag... 164 3e-45
YP_009175759.1 RNA polymerase beta subunit (chloroplast) [Astrag... 164 3e-45
AJE72231.1 RNA polymerase beta subunit (plastid) [Oxytropis lamb... 164 3e-45
AJE71734.1 RNA polymerase beta subunit (plastid) [Astragalus can... 164 3e-45
YP_009109800.1 RNA polymerase beta subunit (chloroplast) [Trifol... 164 4e-45
>ADG85311.1 RNA polymerase beta subunit, partial (chloroplast) [Silene
vulgaris]
Length = 127
Score = 159 bits (402), Expect = 8e-49
Identities = 78/84 (92%), Positives = 82/84 (97%)
Frame = +3
Query: 3 GRLELEIDRKARIWARVSRKQKISILVLLSAMGLNLSEILENVCYPEIFLSFLNDKEEKK 182
GRLELEIDRKARIWARVSRKQKISILVLLSAMGLNL EIL+NVCYPEIFLSFLNDK++KK
Sbjct: 27 GRLELEIDRKARIWARVSRKQKISILVLLSAMGLNLKEILDNVCYPEIFLSFLNDKDKKK 86
Query: 183 IGSKENAILEFYRQFACVGGDPVF 254
GSKENAILEFY+QFACVGGDPVF
Sbjct: 87 FGSKENAILEFYQQFACVGGDPVF 110
>BAC77575.1 RNA polymerase beta subunit, partial (chloroplast) [Nicotiana
tomentosiformis]
Length = 128
Score = 158 bits (399), Expect = 2e-48
Identities = 79/83 (95%), Positives = 81/83 (97%)
Frame = +3
Query: 3 GRLELEIDRKARIWARVSRKQKISILVLLSAMGLNLSEILENVCYPEIFLSFLNDKEEKK 182
GRLELEIDRKARIWARVSRKQKISILVLLSAMGLNL EILENVCYPEIFLSFL+DKE KK
Sbjct: 46 GRLELEIDRKARIWARVSRKQKISILVLLSAMGLNLREILENVCYPEIFLSFLSDKERKK 105
Query: 183 IGSKENAILEFYRQFACVGGDPV 251
IGSKENAILEFY+QFACVGGDPV
Sbjct: 106 IGSKENAILEFYQQFACVGGDPV 128
>XP_007141910.1 hypothetical protein PHAVU_008G236100g, partial [Phaseolus
vulgaris] ESW13904.1 hypothetical protein
PHAVU_008G236100g, partial [Phaseolus vulgaris]
Length = 191
Score = 160 bits (404), Expect = 3e-48
Identities = 78/84 (92%), Positives = 83/84 (98%)
Frame = +3
Query: 3 GRLELEIDRKARIWARVSRKQKISILVLLSAMGLNLSEILENVCYPEIFLSFLNDKEEKK 182
GRLELEID+KARIWARVSRKQKISIL+LLSAMG NLSEILENVCYPEIF+SFLNDK++KK
Sbjct: 10 GRLELEIDKKARIWARVSRKQKISILILLSAMGSNLSEILENVCYPEIFVSFLNDKDKKK 69
Query: 183 IGSKENAILEFYRQFACVGGDPVF 254
IGSKENAILEFYRQFACVGGDPVF
Sbjct: 70 IGSKENAILEFYRQFACVGGDPVF 93
>ADG85308.1 RNA polymerase beta subunit, partial (chloroplast) [Silene
latifolia]
Length = 127
Score = 157 bits (397), Expect = 5e-48
Identities = 77/84 (91%), Positives = 81/84 (96%)
Frame = +3
Query: 3 GRLELEIDRKARIWARVSRKQKISILVLLSAMGLNLSEILENVCYPEIFLSFLNDKEEKK 182
GRLELEIDRKARIWARVSRKQKISILVLLSAMGLNL EIL+NVCYPEIFLSFLNDK++K
Sbjct: 27 GRLELEIDRKARIWARVSRKQKISILVLLSAMGLNLKEILDNVCYPEIFLSFLNDKDKKN 86
Query: 183 IGSKENAILEFYRQFACVGGDPVF 254
GSKENAILEFY+QFACVGGDPVF
Sbjct: 87 FGSKENAILEFYQQFACVGGDPVF 110
>BAC77552.1 RNA polymerase beta subunit, partial (chloroplast) [Nicotiana
sylvestris]
Length = 248
Score = 160 bits (405), Expect = 1e-47
Identities = 80/84 (95%), Positives = 82/84 (97%)
Frame = +3
Query: 3 GRLELEIDRKARIWARVSRKQKISILVLLSAMGLNLSEILENVCYPEIFLSFLNDKEEKK 182
GRLELEIDRKARIWARVSRKQKISILVLLSAMGLNL EILENVCYPEIFLSFL+DKE KK
Sbjct: 142 GRLELEIDRKARIWARVSRKQKISILVLLSAMGLNLREILENVCYPEIFLSFLSDKERKK 201
Query: 183 IGSKENAILEFYRQFACVGGDPVF 254
IGSKENAILEFY+QFACVGGDPVF
Sbjct: 202 IGSKENAILEFYQQFACVGGDPVF 225
>ADG85307.1 RNA polymerase beta subunit, partial (chloroplast) [Silene conica]
Length = 127
Score = 156 bits (394), Expect = 1e-47
Identities = 77/84 (91%), Positives = 81/84 (96%)
Frame = +3
Query: 3 GRLELEIDRKARIWARVSRKQKISILVLLSAMGLNLSEILENVCYPEIFLSFLNDKEEKK 182
GRLELEIDRKARIWARVSRKQKISILVLLSAMGLNL EIL+NVCYPEIFLSFLNDK++K
Sbjct: 27 GRLELEIDRKARIWARVSRKQKISILVLLSAMGLNLKEILDNVCYPEIFLSFLNDKDKKI 86
Query: 183 IGSKENAILEFYRQFACVGGDPVF 254
GSKENAILEFY+QFACVGGDPVF
Sbjct: 87 FGSKENAILEFYQQFACVGGDPVF 110
>ADG85310.1 RNA polymerase beta subunit, partial (chloroplast) [Silene
paradoxa]
Length = 127
Score = 154 bits (390), Expect = 5e-47
Identities = 76/84 (90%), Positives = 81/84 (96%)
Frame = +3
Query: 3 GRLELEIDRKARIWARVSRKQKISILVLLSAMGLNLSEILENVCYPEIFLSFLNDKEEKK 182
GRLELEIDRKARIWARVSRKQKISILVLLSAMGLNL EIL NVCYPEIFLSFLNDK++K
Sbjct: 27 GRLELEIDRKARIWARVSRKQKISILVLLSAMGLNLKEILYNVCYPEIFLSFLNDKDKKI 86
Query: 183 IGSKENAILEFYRQFACVGGDPVF 254
+GSKENAI+EFY+QFACVGGDPVF
Sbjct: 87 LGSKENAIMEFYQQFACVGGDPVF 110
>CAC51380.1 RNA polymerase beta subunit, partial (chloroplast) [Nicotiana
tomentosiformis]
Length = 220
Score = 155 bits (393), Expect = 3e-46
Identities = 78/84 (92%), Positives = 80/84 (95%)
Frame = +3
Query: 3 GRLELEIDRKARIWARVSRKQKISILVLLSAMGLNLSEILENVCYPEIFLSFLNDKEEKK 182
GR ELEIDRKARIWARVSRKQKISILVL SAMGLNL EILENVCYPEIFLSFL+DKE KK
Sbjct: 132 GRSELEIDRKARIWARVSRKQKISILVLSSAMGLNLREILENVCYPEIFLSFLSDKERKK 191
Query: 183 IGSKENAILEFYRQFACVGGDPVF 254
IGSKENAILEFY+QFACVGGDPVF
Sbjct: 192 IGSKENAILEFYQQFACVGGDPVF 215
>AMC32300.1 RNA polymerase beta subunit (chloroplast) [Glycyrrhiza lepidota]
Length = 1070
Score = 166 bits (419), Expect = 7e-46
Identities = 83/85 (97%), Positives = 83/85 (97%)
Frame = +3
Query: 3 GRLELEIDRKARIWARVSRKQKISILVLLSAMGLNLSEILENVCYPEIFLSFLNDKEEKK 182
GRLELEIDRKARIWARVSRKQKISILVL SAMG NLSEILENVCYPEIFLSFLNDKEEKK
Sbjct: 156 GRLELEIDRKARIWARVSRKQKISILVLSSAMGSNLSEILENVCYPEIFLSFLNDKEEKK 215
Query: 183 IGSKENAILEFYRQFACVGGDPVFP 257
IGSKENAILEFYRQFACVGGDPVFP
Sbjct: 216 IGSKENAILEFYRQFACVGGDPVFP 240
>YP_009161288.1 RpoB (chloroplast) [Wisteria floribunda] YP_009233393.1 RpoB
(chloroplast) [Wisteria sinensis] AJC10037.1 RpoB
(chloroplast) [Wisteria floribunda] AMB27273.1 RpoB
(chloroplast) [Wisteria sinensis]
Length = 1070
Score = 166 bits (419), Expect = 7e-46
Identities = 83/85 (97%), Positives = 83/85 (97%)
Frame = +3
Query: 3 GRLELEIDRKARIWARVSRKQKISILVLLSAMGLNLSEILENVCYPEIFLSFLNDKEEKK 182
GRLELEIDRKARIWARVSRKQKISILVL SAMG NLSEILENVCYPEIFLSFLNDKEEKK
Sbjct: 156 GRLELEIDRKARIWARVSRKQKISILVLSSAMGSNLSEILENVCYPEIFLSFLNDKEEKK 215
Query: 183 IGSKENAILEFYRQFACVGGDPVFP 257
IGSKENAILEFYRQFACVGGDPVFP
Sbjct: 216 IGSKENAILEFYRQFACVGGDPVFP 240
>YP_009027272.1 RNA polymerase beta subunit (chloroplast) [Glycyrrhiza glabra]
AGU00068.1 RNA polymerase beta subunit (chloroplast)
[Glycyrrhiza glabra]
Length = 1070
Score = 166 bits (419), Expect = 7e-46
Identities = 83/85 (97%), Positives = 83/85 (97%)
Frame = +3
Query: 3 GRLELEIDRKARIWARVSRKQKISILVLLSAMGLNLSEILENVCYPEIFLSFLNDKEEKK 182
GRLELEIDRKARIWARVSRKQKISILVL SAMG NLSEILENVCYPEIFLSFLNDKEEKK
Sbjct: 156 GRLELEIDRKARIWARVSRKQKISILVLSSAMGSNLSEILENVCYPEIFLSFLNDKEEKK 215
Query: 183 IGSKENAILEFYRQFACVGGDPVFP 257
IGSKENAILEFYRQFACVGGDPVFP
Sbjct: 216 IGSKENAILEFYRQFACVGGDPVFP 240
>ADG85309.1 RNA polymerase beta subunit, partial (chloroplast) [Silene
noctiflora]
Length = 127
Score = 151 bits (382), Expect = 9e-46
Identities = 75/84 (89%), Positives = 80/84 (95%)
Frame = +3
Query: 3 GRLELEIDRKARIWARVSRKQKISILVLLSAMGLNLSEILENVCYPEIFLSFLNDKEEKK 182
GRL+LEIDRKARIWARVSRKQKISILVLLSAMGLNL EIL NVCYPEIFLSFLNDK+++
Sbjct: 27 GRLKLEIDRKARIWARVSRKQKISILVLLSAMGLNLKEILYNVCYPEIFLSFLNDKDKQI 86
Query: 183 IGSKENAILEFYRQFACVGGDPVF 254
GSKENAILEFY+QFACVGGDPVF
Sbjct: 87 FGSKENAILEFYQQFACVGGDPVF 110
>CAI99086.1 RNA polymerase beta subunit, partial (chloroplast) [Arabidopsis
thaliana]
Length = 254
Score = 155 bits (392), Expect = 1e-45
Identities = 76/84 (90%), Positives = 81/84 (96%)
Frame = +3
Query: 3 GRLELEIDRKARIWARVSRKQKISILVLLSAMGLNLSEILENVCYPEIFLSFLNDKEEKK 182
GRLELEID+KARIWARVSRKQKISILVL SAMGLNL EILENVCYPEIFLSFL DKE+KK
Sbjct: 45 GRLELEIDKKARIWARVSRKQKISILVLSSAMGLNLREILENVCYPEIFLSFLTDKEKKK 104
Query: 183 IGSKENAILEFYRQFACVGGDPVF 254
IGSKENAILEFY+QF+CVGGDP+F
Sbjct: 105 IGSKENAILEFYQQFSCVGGDPIF 128
>CAI99072.1 RNA polymerase beta subunit, partial (chloroplast) [Arabidopsis
thaliana]
Length = 267
Score = 155 bits (392), Expect = 2e-45
Identities = 76/84 (90%), Positives = 81/84 (96%)
Frame = +3
Query: 3 GRLELEIDRKARIWARVSRKQKISILVLLSAMGLNLSEILENVCYPEIFLSFLNDKEEKK 182
GRLELEID+KARIWARVSRKQKISILVL SAMGLNL EILENVCYPEIFLSFL DKE+KK
Sbjct: 45 GRLELEIDKKARIWARVSRKQKISILVLSSAMGLNLREILENVCYPEIFLSFLTDKEKKK 104
Query: 183 IGSKENAILEFYRQFACVGGDPVF 254
IGSKENAILEFY+QF+CVGGDP+F
Sbjct: 105 IGSKENAILEFYQQFSCVGGDPIF 128
>YP_009334189.1 RpoB (chloroplast) [Caragana microphylla] APL97395.1 RpoB
(chloroplast) [Caragana microphylla]
Length = 1070
Score = 164 bits (415), Expect = 3e-45
Identities = 82/85 (96%), Positives = 83/85 (97%)
Frame = +3
Query: 3 GRLELEIDRKARIWARVSRKQKISILVLLSAMGLNLSEILENVCYPEIFLSFLNDKEEKK 182
GRLELEIDRKARIWARVSRKQKISILVL SAMG NLSEILENVCYPEIFLSFLN+KEEKK
Sbjct: 156 GRLELEIDRKARIWARVSRKQKISILVLSSAMGSNLSEILENVCYPEIFLSFLNEKEEKK 215
Query: 183 IGSKENAILEFYRQFACVGGDPVFP 257
IGSKENAILEFYRQFACVGGDPVFP
Sbjct: 216 IGSKENAILEFYRQFACVGGDPVFP 240
>YP_009242953.1 RNA polymerase beta subunit (chloroplast) [Astragalus mongholicus]
AMQ99216.1 RNA polymerase beta subunit (chloroplast)
[Astragalus mongholicus]
Length = 1070
Score = 164 bits (415), Expect = 3e-45
Identities = 82/85 (96%), Positives = 83/85 (97%)
Frame = +3
Query: 3 GRLELEIDRKARIWARVSRKQKISILVLLSAMGLNLSEILENVCYPEIFLSFLNDKEEKK 182
GRLELEIDRKARIWARVSRKQKISILVL SAMG NLSEILENVCYPEIFLSFLN+KEEKK
Sbjct: 156 GRLELEIDRKARIWARVSRKQKISILVLSSAMGSNLSEILENVCYPEIFLSFLNEKEEKK 215
Query: 183 IGSKENAILEFYRQFACVGGDPVFP 257
IGSKENAILEFYRQFACVGGDPVFP
Sbjct: 216 IGSKENAILEFYRQFACVGGDPVFP 240
>YP_009175759.1 RNA polymerase beta subunit (chloroplast) [Astragalus mongholicus
var. nakaianus] ALH42737.1 RNA polymerase beta subunit
(chloroplast) [Astragalus mongholicus var. nakaianus]
ANK78934.1 RNA polymerase beta subunit (chloroplast)
[Astragalus membranaceus var. membranaceus]
Length = 1070
Score = 164 bits (415), Expect = 3e-45
Identities = 82/85 (96%), Positives = 83/85 (97%)
Frame = +3
Query: 3 GRLELEIDRKARIWARVSRKQKISILVLLSAMGLNLSEILENVCYPEIFLSFLNDKEEKK 182
GRLELEIDRKARIWARVSRKQKISILVL SAMG NLSEILENVCYPEIFLSFLN+KEEKK
Sbjct: 156 GRLELEIDRKARIWARVSRKQKISILVLSSAMGSNLSEILENVCYPEIFLSFLNEKEEKK 215
Query: 183 IGSKENAILEFYRQFACVGGDPVFP 257
IGSKENAILEFYRQFACVGGDPVFP
Sbjct: 216 IGSKENAILEFYRQFACVGGDPVFP 240
>AJE72231.1 RNA polymerase beta subunit (plastid) [Oxytropis lambertii]
Length = 1070
Score = 164 bits (415), Expect = 3e-45
Identities = 82/85 (96%), Positives = 83/85 (97%)
Frame = +3
Query: 3 GRLELEIDRKARIWARVSRKQKISILVLLSAMGLNLSEILENVCYPEIFLSFLNDKEEKK 182
GRLELEIDRKARIWARVSRKQKISILVL SAMG NLSEILENVCYPEIFLSFLN+KEEKK
Sbjct: 156 GRLELEIDRKARIWARVSRKQKISILVLSSAMGSNLSEILENVCYPEIFLSFLNEKEEKK 215
Query: 183 IGSKENAILEFYRQFACVGGDPVFP 257
IGSKENAILEFYRQFACVGGDPVFP
Sbjct: 216 IGSKENAILEFYRQFACVGGDPVFP 240
>AJE71734.1 RNA polymerase beta subunit (plastid) [Astragalus canadensis]
Length = 1070
Score = 164 bits (415), Expect = 3e-45
Identities = 82/85 (96%), Positives = 83/85 (97%)
Frame = +3
Query: 3 GRLELEIDRKARIWARVSRKQKISILVLLSAMGLNLSEILENVCYPEIFLSFLNDKEEKK 182
GRLELEIDRKARIWARVSRKQKISILVL SAMG NLSEILENVCYPEIFLSFLN+KEEKK
Sbjct: 156 GRLELEIDRKARIWARVSRKQKISILVLSSAMGSNLSEILENVCYPEIFLSFLNEKEEKK 215
Query: 183 IGSKENAILEFYRQFACVGGDPVFP 257
IGSKENAILEFYRQFACVGGDPVFP
Sbjct: 216 IGSKENAILEFYRQFACVGGDPVFP 240
>YP_009109800.1 RNA polymerase beta subunit (chloroplast) [Trifolium boissieri]
AIJ27841.1 RNA polymerase beta subunit (chloroplast)
[Trifolium boissieri]
Length = 1067
Score = 164 bits (414), Expect = 4e-45
Identities = 81/85 (95%), Positives = 83/85 (97%)
Frame = +3
Query: 3 GRLELEIDRKARIWARVSRKQKISILVLLSAMGLNLSEILENVCYPEIFLSFLNDKEEKK 182
GRLELEIDRKARIWARVSRKQKISILVL SAMG NLSEILENVCYPEIFLSFLN+KEEKK
Sbjct: 156 GRLELEIDRKARIWARVSRKQKISILVLSSAMGSNLSEILENVCYPEIFLSFLNEKEEKK 215
Query: 183 IGSKENAILEFYRQFACVGGDPVFP 257
IGSKENAILEFYRQFACVGGDP+FP
Sbjct: 216 IGSKENAILEFYRQFACVGGDPIFP 240