BLASTX nr result

ID: Glycyrrhiza36_contig00009726 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza36_contig00009726
         (266 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GAU36443.1 hypothetical protein TSUD_19780 [Trifolium subterraneum]    59   6e-09
XP_004514863.1 PREDICTED: pentatricopeptide repeat-containing pr...    55   8e-07

>GAU36443.1 hypothetical protein TSUD_19780 [Trifolium subterraneum]
          Length = 169

 Score = 59.3 bits (142), Expect = 6e-09
 Identities = 29/47 (61%), Positives = 34/47 (72%)
 Frame = +2

Query: 125 MEAFRFSFSTSHPHLSIPPKRKHHHSSAAKPISSSLKPPPDSNNNNN 265
           ME+F FS STSH H S+   +   H S++ PIS SLKPPPDSNNNNN
Sbjct: 1   MESFSFSLSTSHSHFSLHSTK---HYSSSTPISFSLKPPPDSNNNNN 44


>XP_004514863.1 PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
           chloroplastic [Cicer arietinum]
          Length = 947

 Score = 55.1 bits (131), Expect = 8e-07
 Identities = 29/47 (61%), Positives = 32/47 (68%), Gaps = 2/47 (4%)
 Frame = +2

Query: 125 MEAFRFSFSTSHPHLSIPPKRK--HHHSSAAKPISSSLKPPPDSNNN 259
           MEAF FSF+TSH H S+  K       SS A PIS SLKPPPDSNN+
Sbjct: 1   MEAFCFSFTTSHSHFSLHSKHNPSSFSSSTATPISFSLKPPPDSNNS 47


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