BLASTX nr result
ID: Glycyrrhiza36_contig00008229
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza36_contig00008229
(381 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_003598635.2 RNA polymerase II fifth largest protein [Medicago... 89 1e-20
GAU39304.1 hypothetical protein TSUD_119090 [Trifolium subterran... 89 3e-19
ABD28306.1 RNA polymerase subunit, RPB5; RNA polymerase Rpb5, N-... 89 4e-19
XP_004514624.1 PREDICTED: DNA-directed RNA polymerase V subunit ... 83 5e-17
XP_004516253.1 PREDICTED: DNA-directed RNA polymerase V subunit ... 81 3e-16
XP_016179475.1 PREDICTED: DNA-directed RNA polymerase V subunit ... 77 7e-15
XP_016179474.1 PREDICTED: DNA-directed RNA polymerases IV and V ... 77 9e-15
XP_006420751.1 hypothetical protein CICLE_v10005821mg [Citrus cl... 75 9e-15
KDO42725.1 hypothetical protein CISIN_1g029683mg [Citrus sinensis] 75 1e-14
XP_015946743.1 PREDICTED: DNA-directed RNA polymerase V subunit ... 76 2e-14
KDO42723.1 hypothetical protein CISIN_1g029683mg [Citrus sinensis] 75 2e-14
KDO42724.1 hypothetical protein CISIN_1g029683mg [Citrus sinensis] 75 3e-14
XP_006494346.1 PREDICTED: DNA-directed RNA polymerase V subunit ... 75 3e-14
XP_006420752.1 hypothetical protein CICLE_v10005821mg [Citrus cl... 75 3e-14
XP_006420753.1 hypothetical protein CICLE_v10005821mg [Citrus cl... 75 4e-14
XP_006494923.1 PREDICTED: DNA-directed RNA polymerase V subunit ... 76 4e-14
XP_015382032.1 PREDICTED: DNA-directed RNA polymerase V subunit ... 75 1e-13
XP_014499453.1 PREDICTED: DNA-directed RNA polymerase V subunit ... 72 6e-13
XP_019427747.1 PREDICTED: DNA-directed RNA polymerase V subunit ... 72 1e-12
KRH30040.1 hypothetical protein GLYMA_11G154500 [Glycine max] 70 5e-12
>XP_003598635.2 RNA polymerase II fifth largest protein [Medicago truncatula]
AES68886.2 RNA polymerase II fifth largest protein
[Medicago truncatula]
Length = 86
Score = 88.6 bits (218), Expect = 1e-20
Identities = 47/82 (57%), Positives = 58/82 (70%)
Frame = +1
Query: 136 ERGSECIVEMEIXXXXXXXVDSIRYFECRRTVLEMLSDRGYAVPPSDLTTTSLLEFRSLF 315
E SEC+V + +++IRYFECR+T+++ML DRGY V SDLT SL EFRS F
Sbjct: 9 ETRSECLVRI---CNEESNIETIRYFECRKTLMDMLHDRGYNVSESDLTL-SLSEFRSRF 64
Query: 316 GQLPKPEALGLCVSLRSNPSIK 381
G+ PKP LG+ VSLRSNPSIK
Sbjct: 65 GEFPKPHTLGVSVSLRSNPSIK 86
>GAU39304.1 hypothetical protein TSUD_119090 [Trifolium subterraneum]
Length = 223
Score = 88.6 bits (218), Expect = 3e-19
Identities = 47/79 (59%), Positives = 56/79 (70%)
Frame = +1
Query: 145 SECIVEMEIXXXXXXXVDSIRYFECRRTVLEMLSDRGYAVPPSDLTTTSLLEFRSLFGQL 324
SEC+V + ++SIRYFECRRT++EML DRGY V SDLT T L +FRS FG+
Sbjct: 12 SECLVHL----CNEGSIESIRYFECRRTLMEMLYDRGYNVSESDLTLT-LFDFRSKFGEF 66
Query: 325 PKPEALGLCVSLRSNPSIK 381
PK E LG+CVS RSNPS K
Sbjct: 67 PKTETLGVCVSHRSNPSNK 85
>ABD28306.1 RNA polymerase subunit, RPB5; RNA polymerase Rpb5, N-terminal
[Medicago truncatula]
Length = 224
Score = 88.6 bits (218), Expect = 4e-19
Identities = 47/82 (57%), Positives = 58/82 (70%)
Frame = +1
Query: 136 ERGSECIVEMEIXXXXXXXVDSIRYFECRRTVLEMLSDRGYAVPPSDLTTTSLLEFRSLF 315
E SEC+V + +++IRYFECR+T+++ML DRGY V SDLT SL EFRS F
Sbjct: 9 ETRSECLVRI---CNEESNIETIRYFECRKTLMDMLHDRGYNVSESDLTL-SLSEFRSRF 64
Query: 316 GQLPKPEALGLCVSLRSNPSIK 381
G+ PKP LG+ VSLRSNPSIK
Sbjct: 65 GEFPKPHTLGVSVSLRSNPSIK 86
>XP_004514624.1 PREDICTED: DNA-directed RNA polymerase V subunit 5C-like [Cicer
arietinum]
Length = 219
Score = 82.8 bits (203), Expect = 5e-17
Identities = 44/84 (52%), Positives = 58/84 (69%)
Frame = +1
Query: 130 MGERGSECIVEMEIXXXXXXXVDSIRYFECRRTVLEMLSDRGYAVPPSDLTTTSLLEFRS 309
M +ECIV+ ++SIRYFECR++++EML DRGY V S++T SL E+R
Sbjct: 1 MATNENECIVKN--LYMNEGSIESIRYFECRKSLMEMLRDRGYNVCQSEITL-SLNEYRQ 57
Query: 310 LFGQLPKPEALGLCVSLRSNPSIK 381
FG +PKPE+LG+CVSL SNPS K
Sbjct: 58 RFGAVPKPESLGVCVSLNSNPSNK 81
>XP_004516253.1 PREDICTED: DNA-directed RNA polymerase V subunit 5C-like isoform X1
[Cicer arietinum]
Length = 219
Score = 80.9 bits (198), Expect = 3e-16
Identities = 45/84 (53%), Positives = 56/84 (66%)
Frame = +1
Query: 130 MGERGSECIVEMEIXXXXXXXVDSIRYFECRRTVLEMLSDRGYAVPPSDLTTTSLLEFRS 309
M +ECIV+ V+SIRYFECR+T++EML DR Y V S++T SL E+R
Sbjct: 1 MATNENECIVKN--LYMNEGSVESIRYFECRKTLMEMLRDRWYNVCQSEITL-SLNEYRQ 57
Query: 310 LFGQLPKPEALGLCVSLRSNPSIK 381
FG +PKPE LG+CVSL SNPS K
Sbjct: 58 RFGAVPKPETLGVCVSLTSNPSNK 81
>XP_016179475.1 PREDICTED: DNA-directed RNA polymerase V subunit 5C isoform X2
[Arachis ipaensis]
Length = 231
Score = 77.4 bits (189), Expect = 7e-15
Identities = 41/61 (67%), Positives = 47/61 (77%)
Frame = +1
Query: 193 VDSIRYFECRRTVLEMLSDRGYAVPPSDLTTTSLLEFRSLFGQLPKPEALGLCVSLRSNP 372
V+S RYF RRTVLEML DRGY VP S+L T SL EFRSL+GQ+P E L + VSLRS+P
Sbjct: 40 VESSRYFHARRTVLEMLRDRGYDVPDSEL-TRSLAEFRSLYGQIPDAETLRISVSLRSDP 98
Query: 373 S 375
S
Sbjct: 99 S 99
>XP_016179474.1 PREDICTED: DNA-directed RNA polymerases IV and V subunit 5B isoform
X1 [Arachis ipaensis]
Length = 241
Score = 77.4 bits (189), Expect = 9e-15
Identities = 41/61 (67%), Positives = 47/61 (77%)
Frame = +1
Query: 193 VDSIRYFECRRTVLEMLSDRGYAVPPSDLTTTSLLEFRSLFGQLPKPEALGLCVSLRSNP 372
V+S RYF RRTVLEML DRGY VP S+L T SL EFRSL+GQ+P E L + VSLRS+P
Sbjct: 40 VESSRYFHARRTVLEMLRDRGYDVPDSEL-TRSLAEFRSLYGQIPDAETLRISVSLRSDP 98
Query: 373 S 375
S
Sbjct: 99 S 99
>XP_006420751.1 hypothetical protein CICLE_v10005821mg [Citrus clementina]
ESR33991.1 hypothetical protein CICLE_v10005821mg
[Citrus clementina]
Length = 155
Score = 75.5 bits (184), Expect = 9e-15
Identities = 43/83 (51%), Positives = 51/83 (61%)
Frame = +1
Query: 133 GERGSECIVEMEIXXXXXXXVDSIRYFECRRTVLEMLSDRGYAVPPSDLTTTSLLEFRSL 312
G G ECI ++S RY+ RRTVL+ML+DRGYAVP S+L T SL EFR
Sbjct: 5 GGGGGECITRSSHVMEGGGSLESYRYYLSRRTVLQMLNDRGYAVPNSEL-TRSLTEFRFT 63
Query: 313 FGQLPKPEALGLCVSLRSNPSIK 381
FG E+L LC+ LRSNPS K
Sbjct: 64 FGDKSDLESLRLCLPLRSNPSKK 86
>KDO42725.1 hypothetical protein CISIN_1g029683mg [Citrus sinensis]
Length = 154
Score = 75.1 bits (183), Expect = 1e-14
Identities = 43/80 (53%), Positives = 50/80 (62%)
Frame = +1
Query: 142 GSECIVEMEIXXXXXXXVDSIRYFECRRTVLEMLSDRGYAVPPSDLTTTSLLEFRSLFGQ 321
G ECI ++S RYF RRTVL+ML+DRGYAVP S+L T SL EFR FG
Sbjct: 7 GGECITRSSHVMEGGGSLESYRYFLSRRTVLQMLNDRGYAVPNSEL-TRSLTEFRFTFGD 65
Query: 322 LPKPEALGLCVSLRSNPSIK 381
E+L LC+ LRSNPS K
Sbjct: 66 KCDLESLRLCLPLRSNPSKK 85
>XP_015946743.1 PREDICTED: DNA-directed RNA polymerase V subunit 5C [Arachis
duranensis]
Length = 223
Score = 76.3 bits (186), Expect = 2e-14
Identities = 40/61 (65%), Positives = 47/61 (77%)
Frame = +1
Query: 193 VDSIRYFECRRTVLEMLSDRGYAVPPSDLTTTSLLEFRSLFGQLPKPEALGLCVSLRSNP 372
V+S RYF RRTVLEML DRGY VP S+L T SL EFRSL+G++P E L + VSLRS+P
Sbjct: 22 VESSRYFHARRTVLEMLRDRGYDVPDSEL-TRSLAEFRSLYGRIPNAETLRISVSLRSDP 80
Query: 373 S 375
S
Sbjct: 81 S 81
>KDO42723.1 hypothetical protein CISIN_1g029683mg [Citrus sinensis]
Length = 179
Score = 75.1 bits (183), Expect = 2e-14
Identities = 43/80 (53%), Positives = 50/80 (62%)
Frame = +1
Query: 142 GSECIVEMEIXXXXXXXVDSIRYFECRRTVLEMLSDRGYAVPPSDLTTTSLLEFRSLFGQ 321
G ECI ++S RYF RRTVL+ML+DRGYAVP S+L T SL EFR FG
Sbjct: 7 GGECITRSSHVMEGGGSLESYRYFLSRRTVLQMLNDRGYAVPNSEL-TRSLTEFRFTFGD 65
Query: 322 LPKPEALGLCVSLRSNPSIK 381
E+L LC+ LRSNPS K
Sbjct: 66 KCDLESLRLCLPLRSNPSKK 85
>KDO42724.1 hypothetical protein CISIN_1g029683mg [Citrus sinensis]
Length = 189
Score = 75.1 bits (183), Expect = 3e-14
Identities = 43/80 (53%), Positives = 50/80 (62%)
Frame = +1
Query: 142 GSECIVEMEIXXXXXXXVDSIRYFECRRTVLEMLSDRGYAVPPSDLTTTSLLEFRSLFGQ 321
G ECI ++S RYF RRTVL+ML+DRGYAVP S+L T SL EFR FG
Sbjct: 7 GGECITRSSHVMEGGGSLESYRYFLSRRTVLQMLNDRGYAVPNSEL-TRSLTEFRFTFGD 65
Query: 322 LPKPEALGLCVSLRSNPSIK 381
E+L LC+ LRSNPS K
Sbjct: 66 KCDLESLRLCLPLRSNPSKK 85
>XP_006494346.1 PREDICTED: DNA-directed RNA polymerase V subunit 5C isoform X1
[Citrus sinensis] XP_015381549.1 PREDICTED: DNA-directed
RNA polymerase V subunit 5C isoform X2 [Citrus sinensis]
Length = 189
Score = 75.1 bits (183), Expect = 3e-14
Identities = 43/80 (53%), Positives = 50/80 (62%)
Frame = +1
Query: 142 GSECIVEMEIXXXXXXXVDSIRYFECRRTVLEMLSDRGYAVPPSDLTTTSLLEFRSLFGQ 321
G ECI ++S RYF RRTVL+ML+DRGYAVP S+L T SL EFR FG
Sbjct: 7 GGECITRSSHVMEGGGSLESYRYFLSRRTVLQMLNDRGYAVPNSEL-TRSLTEFRFTFGD 65
Query: 322 LPKPEALGLCVSLRSNPSIK 381
E+L LC+ LRSNPS K
Sbjct: 66 KCDLESLRLCLPLRSNPSKK 85
>XP_006420752.1 hypothetical protein CICLE_v10005821mg [Citrus clementina]
ESR33992.1 hypothetical protein CICLE_v10005821mg
[Citrus clementina]
Length = 209
Score = 75.5 bits (184), Expect = 3e-14
Identities = 43/83 (51%), Positives = 51/83 (61%)
Frame = +1
Query: 133 GERGSECIVEMEIXXXXXXXVDSIRYFECRRTVLEMLSDRGYAVPPSDLTTTSLLEFRSL 312
G G ECI ++S RY+ RRTVL+ML+DRGYAVP S+L T SL EFR
Sbjct: 5 GGGGGECITRSSHVMEGGGSLESYRYYLSRRTVLQMLNDRGYAVPNSEL-TRSLTEFRFT 63
Query: 313 FGQLPKPEALGLCVSLRSNPSIK 381
FG E+L LC+ LRSNPS K
Sbjct: 64 FGDKSDLESLRLCLPLRSNPSKK 86
>XP_006420753.1 hypothetical protein CICLE_v10005821mg [Citrus clementina]
ESR33993.1 hypothetical protein CICLE_v10005821mg
[Citrus clementina]
Length = 224
Score = 75.5 bits (184), Expect = 4e-14
Identities = 43/83 (51%), Positives = 51/83 (61%)
Frame = +1
Query: 133 GERGSECIVEMEIXXXXXXXVDSIRYFECRRTVLEMLSDRGYAVPPSDLTTTSLLEFRSL 312
G G ECI ++S RY+ RRTVL+ML+DRGYAVP S+L T SL EFR
Sbjct: 5 GGGGGECITRSSHVMEGGGSLESYRYYLSRRTVLQMLNDRGYAVPNSEL-TRSLTEFRFT 63
Query: 313 FGQLPKPEALGLCVSLRSNPSIK 381
FG E+L LC+ LRSNPS K
Sbjct: 64 FGDKSDLESLRLCLPLRSNPSKK 86
>XP_006494923.1 PREDICTED: DNA-directed RNA polymerase V subunit 5C-like [Citrus
sinensis]
Length = 252
Score = 75.9 bits (185), Expect = 4e-14
Identities = 43/80 (53%), Positives = 50/80 (62%)
Frame = +1
Query: 142 GSECIVEMEIXXXXXXXVDSIRYFECRRTVLEMLSDRGYAVPPSDLTTTSLLEFRSLFGQ 321
G ECI ++S RYF RRTVL+ML+DRGYAVP S+L T SL EFR FG
Sbjct: 7 GGECITRSSHVMEGGGSLESYRYFLSRRTVLQMLNDRGYAVPNSEL-TRSLTEFRFTFGD 65
Query: 322 LPKPEALGLCVSLRSNPSIK 381
E+L LC+ LRSNPS K
Sbjct: 66 KSDLESLRLCLPLRSNPSKK 85
>XP_015382032.1 PREDICTED: DNA-directed RNA polymerase V subunit 5C-like [Citrus
sinensis]
Length = 312
Score = 75.1 bits (183), Expect = 1e-13
Identities = 43/80 (53%), Positives = 50/80 (62%)
Frame = +1
Query: 142 GSECIVEMEIXXXXXXXVDSIRYFECRRTVLEMLSDRGYAVPPSDLTTTSLLEFRSLFGQ 321
G ECI ++S RYF RRTVL+ML+DRGYAVP S+L T SL EFR FG
Sbjct: 7 GGECITRSSHVMEGGGSLESYRYFLSRRTVLQMLNDRGYAVPNSEL-TRSLTEFRFTFGD 65
Query: 322 LPKPEALGLCVSLRSNPSIK 381
E+L LC+ LRSNPS K
Sbjct: 66 KCDLESLRLCLPLRSNPSKK 85
>XP_014499453.1 PREDICTED: DNA-directed RNA polymerase V subunit 5C [Vigna radiata
var. radiata]
Length = 213
Score = 72.0 bits (175), Expect = 6e-13
Identities = 39/61 (63%), Positives = 43/61 (70%)
Frame = +1
Query: 193 VDSIRYFECRRTVLEMLSDRGYAVPPSDLTTTSLLEFRSLFGQLPKPEALGLCVSLRSNP 372
V+S RYF RRTVLEML+DRGY V T+SL +FRS FGQ P EALG CVS SNP
Sbjct: 13 VESSRYFLSRRTVLEMLADRGYDVVQHANLTSSLSDFRSRFGQQPNHEALGFCVSHLSNP 72
Query: 373 S 375
S
Sbjct: 73 S 73
>XP_019427747.1 PREDICTED: DNA-directed RNA polymerase V subunit 5C [Lupinus
angustifolius] OIW16898.1 hypothetical protein
TanjilG_01763 [Lupinus angustifolius]
Length = 223
Score = 71.6 bits (174), Expect = 1e-12
Identities = 40/63 (63%), Positives = 47/63 (74%)
Frame = +1
Query: 193 VDSIRYFECRRTVLEMLSDRGYAVPPSDLTTTSLLEFRSLFGQLPKPEALGLCVSLRSNP 372
V+S RYF RRTVLEML DRGY VP S+L T SL EFRS+FG+ P E+L + VSL S+P
Sbjct: 23 VESSRYFHSRRTVLEMLRDRGYDVPDSEL-TRSLPEFRSIFGEKPNHESLTIRVSLLSDP 81
Query: 373 SIK 381
S K
Sbjct: 82 SNK 84
>KRH30040.1 hypothetical protein GLYMA_11G154500 [Glycine max]
Length = 236
Score = 70.1 bits (170), Expect = 5e-12
Identities = 39/80 (48%), Positives = 47/80 (58%)
Frame = +1
Query: 136 ERGSECIVEMEIXXXXXXXVDSIRYFECRRTVLEMLSDRGYAVPPSDLTTTSLLEFRSLF 315
+ ECI +M ++S+RYF RRT+LEML DRGY V + SL EFRS F
Sbjct: 20 QNAMECIAKMT---KDNGSMESLRYFLSRRTLLEMLQDRGYDVVQHANLSPSLAEFRSRF 76
Query: 316 GQLPKPEALGLCVSLRSNPS 375
GQ P P+ L CVS SNPS
Sbjct: 77 GQNPNPQTLAFCVSHLSNPS 96