BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza36_contig00005367
         (709 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KHN33900.1 Putative ribonuclease H protein, partial [Glycine soja]    127   3e-47
KYP78366.1 Putative ribonuclease H protein At1g65750 family [Caj...   118   2e-43
KYP61064.1 Putative ribonuclease H protein At1g65750 family, par...   110   3e-43
GAU35685.1 hypothetical protein TSUD_162570 [Trifolium subterran...   110   2e-42
GAU25827.1 hypothetical protein TSUD_30910 [Trifolium subterraneum]   101   2e-42
GAU50504.1 hypothetical protein TSUD_409790 [Trifolium subterran...   108   3e-41
GAU24540.1 hypothetical protein TSUD_156530 [Trifolium subterran...   100   7e-41
KYP65324.1 Putative ribonuclease H protein At1g65750 family [Caj...   105   4e-40
GAU50297.1 hypothetical protein TSUD_288310 [Trifolium subterran...   105   6e-40
GAU35042.1 hypothetical protein TSUD_30080 [Trifolium subterraneum]   107   5e-39
GAU14768.1 hypothetical protein TSUD_204170 [Trifolium subterran...    98   8e-39
GAU21723.1 hypothetical protein TSUD_328480 [Trifolium subterran...    97   9e-38
KYP37151.1 Putative ribonuclease H protein At1g65750 family [Caj...   103   2e-37
KYP70291.1 Putative ribonuclease H protein At1g65750 family [Caj...   102   7e-37
KYP70287.1 Putative ribonuclease H protein At1g65750 family [Caj...   102   7e-37
KYP70284.1 Putative ribonuclease H protein At1g65750 family [Caj...   100   2e-36
KYP43190.1 Putative ribonuclease H protein At1g65750 family [Caj...    94   5e-36
KYP52841.1 Putative ribonuclease H protein At1g65750 family [Caj...    94   5e-36
KHN20047.1 Putative ribonuclease H protein, partial [Glycine soja]    135   5e-36
GAU51664.1 hypothetical protein TSUD_268670 [Trifolium subterran...   103   8e-36

>KHN33900.1 Putative ribonuclease H protein, partial [Glycine soja]
          Length = 385

 Score =  127 bits (320), Expect(2) = 3e-47
 Identities = 46/125 (36%), Positives = 85/125 (68%)
 Frame = -1

Query: 376 GFLWRLGKGDCSLWYDRWLKQGPICDKIPFVDIHDLSMRVRDVFHEGHWQFDRSYTHIPL 197
           GF +RLG+GD SLWYD+WL    +C  +PFV+I D  ++ +D+F +G W F++  T +P+
Sbjct: 86  GFQYRLGRGDISLWYDKWLTDDYLCHLVPFVNIQDTQLKAQDIFQDGIWHFEKLSTPLPM 145

Query: 196 DIQLVMRSLVLTDSLNDVLIWGPATTGKYSVNSGYNWLLHLDTDAHDQQASWTWVWKLNL 17
           + +  ++S +L D++ DV++WGP+    ++  + + WL+ +++    Q  +W+W+WKL +
Sbjct: 146 ETKKQIQSYILNDNMEDVIVWGPSGDKIFTATTAFKWLIAVNSLPISQFGNWSWIWKLQI 205

Query: 16  PENLR 2
           PEN++
Sbjct: 206 PENIK 210



 Score = 89.4 bits (220), Expect(2) = 3e-47
 Identities = 40/79 (50%), Positives = 52/79 (65%), Gaps = 1/79 (1%)
 Frame = -2

Query: 621 HWVRWDTVTLPKRCGGLGIHRARETNVALLGKHVWEVLHHPSKLWVQLLGCRYL-PDHSI 445
           HWV W+T++LPK  GGL I  +R  N++LLGKH W+ L    KLWVQ+L  +YL    S+
Sbjct: 1   HWVNWETISLPKALGGLNIRPSRHVNISLLGKHAWDFLREKQKLWVQMLESKYLRQGESL 60

Query: 444 LDCHIPSHASYTWRSILKA 388
           L+      ASYTW SI+KA
Sbjct: 61  LEASTLDGASYTWNSIVKA 79


>KYP78366.1 Putative ribonuclease H protein At1g65750 family [Cajanus cajan]
          Length = 1090

 Score =  118 bits (296), Expect(2) = 2e-43
 Identities = 49/127 (38%), Positives = 78/127 (61%), Gaps = 2/127 (1%)
 Frame = -1

Query: 376  GFLWRLGKGDCSLWYDRWLKQGPICDKIPFVDIHDLSMRVRDVFHEGHWQFDRSYTHIPL 197
            GF  +LG  D S W+  W  +GP+C+++  +D+HDL MRVRDV++E  W     +T +  
Sbjct: 662  GFKLKLGNRDVSFWFKDWTGEGPLCERVWAIDVHDLEMRVRDVWNEEGWNLSSLWTSLSK 721

Query: 196  DIQ--LVMRSLVLTDSLNDVLIWGPATTGKYSVNSGYNWLLHLDTDAHDQQASWTWVWKL 23
            D    L+ ++L+L++ L+D ++W P  TG YS  SGYNWL   + +    +  W W+WK+
Sbjct: 722  DFNHVLLKQTLLLSEGLHDCIVWKPDLTGNYSAKSGYNWLT-FEPEQQPSEDKWLWIWKI 780

Query: 22   NLPENLR 2
              PEN++
Sbjct: 781  YAPENIK 787



 Score = 86.3 bits (212), Expect(2) = 2e-43
 Identities = 45/109 (41%), Positives = 61/109 (55%), Gaps = 3/109 (2%)
 Frame = -2

Query: 705 MQNLWLPSGICAQIDSCIKKFIWGGNHS---HWVRWDTVTLPKRCGGLGIHRARETNVAL 535
           MQ  W P+ IC+ +D   + FIW G+     + V W  +T  +R GGL    +R  NV+L
Sbjct: 548 MQLYWFPNYICSTLDQMSRDFIWKGSSGKGINLVAWTKITRRRREGGLNTRISRFKNVSL 607

Query: 534 LGKHVWEVLHHPSKLWVQLLGCRYLPDHSILDCHIPSHASYTWRSILKA 388
           LGK VW++L    K WV ++  +YL   SIL C      SY WRSI+KA
Sbjct: 608 LGKLVWDLLQGHDKFWVSIMSKKYLLSDSILKCQ-KKQGSYVWRSIIKA 655


>KYP61064.1 Putative ribonuclease H protein At1g65750 family, partial [Cajanus
           cajan]
          Length = 977

 Score =  110 bits (275), Expect(2) = 3e-43
 Identities = 44/129 (34%), Positives = 80/129 (62%), Gaps = 2/129 (1%)
 Frame = -1

Query: 382 KDGFLWRLGKGDCSLWYDRWLKQGPICDKIPFVDIHDLSMRVRDVFHEGHWQFDRSYTHI 203
           + GF ++LG G+ S W++ W  +GP+ +++PFV +HDL++RVRDV+ +G W  ++ ++ +
Sbjct: 545 RPGFRFQLGDGEASFWFENWFHEGPLANEVPFVHLHDLTLRVRDVWQDGRWHLEQLHSWL 604

Query: 202 PLDIQ--LVMRSLVLTDSLNDVLIWGPATTGKYSVNSGYNWLLHLDTDAHDQQASWTWVW 29
             ++Q  ++   + L  S +D ++W  +T G+Y   +GY WL   D    D    W W+W
Sbjct: 605 STELQARILSMQIWLHPSASDGIVWEASTNGEYLARTGYQWLCDRDVVLSD---GWQWIW 661

Query: 28  KLNLPENLR 2
           +L L E++R
Sbjct: 662 RLPLSESIR 670



 Score = 93.6 bits (231), Expect(2) = 3e-43
 Identities = 39/85 (45%), Positives = 59/85 (69%), Gaps = 3/85 (3%)
 Frame = -2

Query: 708 SMQNLWLPSGICAQIDSCIKKFIW---GGNHSHWVRWDTVTLPKRCGGLGIHRARETNVA 538
           +MQ  WLPSG C Q+D+  ++FIW   G    H V+W+T+T P++ GGLG+  AR  N++
Sbjct: 433 TMQTQWLPSGTCDQLDALSRRFIWSREGARKLHLVKWETLTRPRKEGGLGVCIARNKNIS 492

Query: 537 LLGKHVWEVLHHPSKLWVQLLGCRY 463
           LLGK +W++ HH  KLWV+++  +Y
Sbjct: 493 LLGKLIWDLFHHTDKLWVRVVMAKY 517


>GAU35685.1 hypothetical protein TSUD_162570 [Trifolium subterraneum]
          Length = 1375

 Score =  110 bits (274), Expect(2) = 2e-42
 Identities = 55/132 (41%), Positives = 71/132 (53%), Gaps = 5/132 (3%)
 Frame = -1

Query: 382  KDGFLWRLGKGDCSLWYDRWLKQGPICDKIPFVDIHDLSMRVRDVFHEGHWQFDRSYTHI 203
            KDGF +RLG G+ S WY  W   G + D++P+VDIHDL MRVRDV+    W F+  YT I
Sbjct: 1056 KDGFQFRLGDGNSSFWYSNWSGIGNLADQVPYVDIHDLQMRVRDVYTNNKWNFNLLYTTI 1115

Query: 202  PLDIQLVMRSL--VLTDSLNDVLIWGPATTGKYSVNSGYNWLLHL---DTDAHDQQASWT 38
            P D+   ++ L   L   + D   W     G Y+   GY WL      DTD  D   SW 
Sbjct: 1116 PADVMDHVKRLPVCLNSQVVDRYTWKGNLNGLYTAKEGYYWLNRFAFSDTDTDD--ISWN 1173

Query: 37   WVWKLNLPENLR 2
            WVW +  PE ++
Sbjct: 1174 WVWHIPAPEKIK 1185



 Score = 91.3 bits (225), Expect(2) = 2e-42
 Identities = 48/109 (44%), Positives = 61/109 (55%), Gaps = 3/109 (2%)
 Frame = -2

Query: 705  MQNLWLPSGICAQIDSCIKKFIWGGNHS---HWVRWDTVTLPKRCGGLGIHRARETNVAL 535
            MQ  WLP   C  ID   + F+W G  +   H V WD +T PK+ GGLGI +ARE N +L
Sbjct: 944  MQVAWLPQTTCDSIDRMTRSFLWKGASNKGIHLVGWDKITKPKKLGGLGIRKAREVNTSL 1003

Query: 534  LGKHVWEVLHHPSKLWVQLLGCRYLPDHSILDCHIPSHASYTWRSILKA 388
            LGK VW +  +   LWVQ+L  +YL D         S  S TW +I+KA
Sbjct: 1004 LGKLVWHMHQNCDTLWVQVLRHKYLNDDMFFSITKKS-GSITWNAIMKA 1051


>GAU25827.1 hypothetical protein TSUD_30910 [Trifolium subterraneum]
          Length = 592

 Score =  101 bits (251), Expect(2) = 2e-42
 Identities = 46/110 (41%), Positives = 66/110 (60%), Gaps = 3/110 (2%)
 Frame = -2

Query: 708 SMQNLWLPSGICAQIDSCIKKFIWGGNHS---HWVRWDTVTLPKRCGGLGIHRARETNVA 538
           S++  W P  IC  ID   + FIW  +++   H V W+ +  PK+CGGLGI   +E N++
Sbjct: 67  SLEIAWFPQSICDNIDQATRNFIWRDSNNKGIHLVGWNKIARPKQCGGLGIRPTKEANIS 126

Query: 537 LLGKHVWEVLHHPSKLWVQLLGCRYLPDHSILDCHIPSHASYTWRSILKA 388
           LL KHVW+++   SKLWV LL  +Y    ++L    PS  S TW SI++A
Sbjct: 127 LLEKHVWDMVQSSSKLWVDLLSSKYTAGKNLLLTSNPSSGSSTWSSIIRA 176



 Score = 99.8 bits (247), Expect(2) = 2e-42
 Identities = 50/138 (36%), Positives = 71/138 (51%), Gaps = 4/138 (2%)
 Frame = -1

Query: 403 INSESGXKDGFLWRLGKGDCSLWYDRWLKQGPICDKIPFVDIHDLSMRVRDVFHEGHWQF 224
           I ++   K+GF WR   G  S W+  W   G +   +P+VDIHDL + V+DV   G+   
Sbjct: 174 IRAKDILKEGFSWRADSGSSSFWFTPWTALGRLGSLVPYVDIHDLQLSVKDVLSIGNPHT 233

Query: 223 DRSYTHI-PLDIQLVMR-SLVLTDSLNDVLIWGPATTGKYSVNSGYNWLLHLD--TDAHD 56
              YT + PL   +V   +    DS+ D  IW       Y+  SGYNWLL L      H+
Sbjct: 234 QSLYTQLPPLASDIVNNANFKFNDSIEDAFIWTNNKNDTYTTKSGYNWLLSLRDLVINHN 293

Query: 55  QQASWTWVWKLNLPENLR 2
              SW+W+WK+ LPE ++
Sbjct: 294 PSHSWSWIWKIQLPEKIK 311


>GAU50504.1 hypothetical protein TSUD_409790 [Trifolium subterraneum]
          Length = 902

 Score =  108 bits (270), Expect(2) = 3e-41
 Identities = 49/138 (35%), Positives = 74/138 (53%), Gaps = 4/138 (2%)
 Frame = -1

Query: 403  INSESGXKDGFLWRLGKGDCSLWYDRWLKQGPICDKIPFVDIHDLSMRVRDVFHEGHWQF 224
            I +++  KDGF WR G G  S W   W   G +   +P++DIHDL + ++DV        
Sbjct: 639  IQAKNILKDGFSWRAGSGTSSFWSSHWTTLGQLGALVPYIDIHDLQLSIKDVLSTNSPHT 698

Query: 223  DRSYTHIPLDIQLVMRSLVL--TDSLNDVLIWGPATTGKYSVNSGYNWLLHLD--TDAHD 56
               YT +P  +  ++ ++ +   DS++D  IW     G Y+  SGYNWLL L      H+
Sbjct: 699  HILYTQLPPSVSDLINNIHIKFNDSIDDAFIWTSNKNGSYTTKSGYNWLLSLQNLVTPHN 758

Query: 55   QQASWTWVWKLNLPENLR 2
               SW+W+WKL LPE ++
Sbjct: 759  PSLSWSWIWKLQLPEKIK 776



 Score = 88.6 bits (218), Expect(2) = 3e-41
 Identities = 45/109 (41%), Positives = 62/109 (56%), Gaps = 3/109 (2%)
 Frame = -2

Query: 705 MQNLWLPSGICAQIDSCIKKFIWGGNHS---HWVRWDTVTLPKRCGGLGIHRARETNVAL 535
           MQ  WLP  IC  ID   + FIW  +++   H V W  +  PK+ GGL I  AR  N++L
Sbjct: 533 MQISWLPQSICDSIDQTTRNFIWRDSNNKGIHLVSWKKIARPKQHGGLSIRTARGQNISL 592

Query: 534 LGKHVWEVLHHPSKLWVQLLGCRYLPDHSILDCHIPSHASYTWRSILKA 388
           LGK VW+++   +KLWV LL  +Y+   + L     S  S TW SI++A
Sbjct: 593 LGKLVWDMVQSSNKLWVDLLSSKYVKGSTFLLSGNNSSGSPTWSSIIQA 641


>GAU24540.1 hypothetical protein TSUD_156530 [Trifolium subterraneum]
          Length = 1147

 Score =  100 bits (249), Expect(2) = 7e-41
 Identities = 44/131 (33%), Positives = 77/131 (58%), Gaps = 4/131 (3%)
 Frame = -1

Query: 382  KDGFLWRLGKGDCSLWYDRWLKQGPICDKIPFVDIHDLSMRVRDVFHEGHWQFDRSYTHI 203
            +DGF +++G G+   WYD W  +  +C  +PFV I D  +++ DV+  G W  ++ YT I
Sbjct: 713  RDGFTFKIGNGNSRFWYDPWALKENLCSTVPFVAIQDTDLKINDVWCNGRWHLEKLYTSI 772

Query: 202  PLDIQ---LVMRSLVLTDSLNDVLIWGPATTGKYSVNSGYNWLLH-LDTDAHDQQASWTW 35
            P + +   L+++  ++ D L DV +W  ++ G Y+    Y WLL+ L  ++H    +W W
Sbjct: 773  PDEARNYILLLQPYIVNDIL-DVWVWQNSSNGVYTTKDAYEWLLNPLPINSH---LNWKW 828

Query: 34   VWKLNLPENLR 2
            +W+L LP N++
Sbjct: 829  IWQLKLPANIQ 839



 Score = 95.5 bits (236), Expect(2) = 7e-41
 Identities = 47/109 (43%), Positives = 65/109 (59%), Gaps = 3/109 (2%)
 Frame = -2

Query: 705 MQNLWLPSGICAQIDSCIKKFIWGGNHS---HWVRWDTVTLPKRCGGLGIHRARETNVAL 535
           MQ  WLP G+C  +D  +++FIW G      H VRW+ +T P+R GGLG+  AR  NV+L
Sbjct: 601 MQINWLPQGMCDDLDRTVRRFIWKGTGDTGMHLVRWEKITQPRRFGGLGVRIARLQNVSL 660

Query: 534 LGKHVWEVLHHPSKLWVQLLGCRYLPDHSILDCHIPSHASYTWRSILKA 388
           LGK +WEV + P KLWV+L   +Y     + +  + S  S  W S+ KA
Sbjct: 661 LGKLIWEVSNSPGKLWVKLFIDKYTKGRHLFNVSV-SGGSCIWNSLAKA 708


>KYP65324.1 Putative ribonuclease H protein At1g65750 family [Cajanus cajan]
          Length = 729

 Score =  105 bits (263), Expect(2) = 4e-40
 Identities = 52/124 (41%), Positives = 76/124 (61%), Gaps = 6/124 (4%)
 Frame = -2

Query: 708 SMQNLWLPSGICAQIDSCIKKFIWG--GNHSHW--VRWDTVTLPKRCGGLGIHRARETNV 541
           SMQ+LWLP  +C +I+   +  +W   G+  +W  V W+TVT PK  GGLGI  +R+ N+
Sbjct: 198 SMQSLWLPQAVCNRINQASRTMLWAKAGSSRYWSLVGWNTVTRPKEFGGLGIRESRQVNI 257

Query: 540 ALLGKHVWEVLHHPSKLWVQLLGCRYLPDHSILDCHIPSHASYTWRSILKAA--XKMVFF 367
           +L+GK +W++LH P K WV++L  +YL   S+L     + AS  W SI+KA    +  FF
Sbjct: 258 SLIGKLIWDLLHSPQKPWVKILQAKYLHGASVLQAKKANGASQVWNSIVKALPYLRQGFF 317

Query: 366 GGLG 355
             LG
Sbjct: 318 PKLG 321



 Score = 87.4 bits (215), Expect(2) = 4e-40
 Identities = 42/129 (32%), Positives = 71/129 (55%), Gaps = 2/129 (1%)
 Frame = -1

Query: 382 KDGFLWRLGKGDCSLWYDRWLKQGPICDKIPFVDIHDLSMRVRDVFHEGHWQFDRSYTHI 203
           + GF  +LG G+ SLWY+ WL  GP+C ++P+V I D    V   + +G W FD  +T +
Sbjct: 313 RQGFFPKLGAGNSSLWYEDWLGTGPLCREVPYVHISDTDRIVAHCWQQGAWNFDSLFTRL 372

Query: 202 PLDIQLVMRSLVLTDSL--NDVLIWGPATTGKYSVNSGYNWLLHLDTDAHDQQASWTWVW 29
           P+++   ++ + +  S    D+  W   ++G Y+  SG+ +L   D    D    W  VW
Sbjct: 373 PMELVNRIQQVPIPSSPAGADMFSWAGDSSGCYTAASGFRFLFSPDHGLAD--PVWKRVW 430

Query: 28  KLNLPENLR 2
           KL++PE ++
Sbjct: 431 KLHVPEKIK 439


>GAU50297.1 hypothetical protein TSUD_288310 [Trifolium subterraneum]
          Length = 545

 Score =  105 bits (262), Expect(2) = 6e-40
 Identities = 52/130 (40%), Positives = 70/130 (53%), Gaps = 3/130 (2%)
 Frame = -1

Query: 382 KDGFLWRLGKGDCSLWYDRWLKQGPICDKIPFVDIHDLSMRVRDVFHEGHWQFDRSYTHI 203
           KDGF +RLG G+ S WY  WL  G + D++P+VDIHDL MRVRDV+ +  W F+  YT I
Sbjct: 113 KDGFQFRLGDGNSSFWYLNWLGIGNLADQVPYVDIHDLQMRVRDVYTDNKWNFNLLYTTI 172

Query: 202 PLDIQLVMRSL--VLTDSLNDVLIWGPATTGKYSVNSGYNWLLHLD-TDAHDQQASWTWV 32
           P D+   ++ L   L   + D   W     G Y+   GY WL     +D      SW  V
Sbjct: 173 PADVMDHLKRLPVCLNSQVVDRYTWKGNLNGLYTAKEGYYWLNRFSFSDTATDDISWNSV 232

Query: 31  WKLNLPENLR 2
           W +  PE ++
Sbjct: 233 WHIPAPEKIK 242



 Score = 87.4 bits (215), Expect(2) = 6e-40
 Identities = 45/109 (41%), Positives = 58/109 (53%), Gaps = 3/109 (2%)
 Frame = -2

Query: 705 MQNLWLPSGICAQIDSCIKKFIW---GGNHSHWVRWDTVTLPKRCGGLGIHRARETNVAL 535
           MQ  WLP   C  ID   + F+W        H V WD +T PK+ GGLGI +ARE N +L
Sbjct: 1   MQVAWLPQTTCDSIDRMTRSFLWKDASNKGIHLVGWDKITKPKKLGGLGIRKAREANTSL 60

Query: 534 LGKHVWEVLHHPSKLWVQLLGCRYLPDHSILDCHIPSHASYTWRSILKA 388
           LGK VW +  +    W+Q+L  +YL D   L        S TW +I+KA
Sbjct: 61  LGKLVWHMHQNCDTFWLQILRHKYLNDDMFLSI-TKKPGSITWNAIMKA 108


>GAU35042.1 hypothetical protein TSUD_30080 [Trifolium subterraneum]
          Length = 724

 Score =  107 bits (266), Expect(2) = 5e-39
 Identities = 50/133 (37%), Positives = 77/133 (57%), Gaps = 3/133 (2%)
 Frame = -1

Query: 391 SGXKDGFLWRLGKGDCSLWYDRWLKQGPICDKIPFVDIHDLSMRVRDVFHEGHWQFDRSY 212
           S  K+G+ +RLG G+ S W+  W   G + +++ +VDIHDL MRVRDV+ +G W F+  Y
Sbjct: 308 SALKEGYHFRLGNGNSSFWFTNWSGSGVLANQVMYVDIHDLEMRVRDVYIDGIWNFNALY 367

Query: 211 THIPLDI--QLVMRSLVLTDSLNDVLIWGPATTGKYSVNSGYNWLLHLDTDAHDQQ-ASW 41
           T +P++I  +L+   + L  S+ND   W     G Y+   GY+WL      A+     SW
Sbjct: 368 TALPMEIKERLISFPICLNPSINDCYTWKGNLQGIYTAWDGYHWLNRNAFSANPTSVVSW 427

Query: 40  TWVWKLNLPENLR 2
           +W+W L  PE ++
Sbjct: 428 SWLWHLPAPEKIK 440



 Score = 82.8 bits (203), Expect(2) = 5e-39
 Identities = 42/109 (38%), Positives = 59/109 (54%), Gaps = 3/109 (2%)
 Frame = -2

Query: 705 MQNLWLPSGICAQIDSCIKKFIWGGNHS---HWVRWDTVTLPKRCGGLGIHRARETNVAL 535
           MQ  WLP      ID   + F+W G+ +   H V WD  T PK+ GGLGI + RE N +L
Sbjct: 199 MQITWLPQTTSDSIDKMARNFLWKGSSNTGIHLVGWDKTTKPKKLGGLGIRKLREANTSL 258

Query: 534 LGKHVWEVLHHPSKLWVQLLGCRYLPDHSILDCHIPSHASYTWRSILKA 388
           LGK VW +  +   LWVQ++  +Y+    +L+         TW +I+KA
Sbjct: 259 LGKLVWNIHQNNEALWVQVIRHKYIKGEVLLNI-TKKPGLVTWNAIMKA 306


>GAU14768.1 hypothetical protein TSUD_204170 [Trifolium subterraneum]
          Length = 503

 Score = 97.8 bits (242), Expect(2) = 8e-39
 Identities = 41/128 (32%), Positives = 70/128 (54%), Gaps = 2/128 (1%)
 Frame = -1

Query: 379 DGFLWRLGKGDCSLWYDRWLKQGPICDKIPFVDIHDLSMRVRDVFHEGHWQFDRSYTHIP 200
           DGF +R+G G+ S WY  W+ + P+C  + +V I D  +R++D+F    W  ++ YT + 
Sbjct: 164 DGFHYRIGDGNSSFWYSPWISRDPLCKSLDYVAIQDSQLRLKDIFFNDSWHLNQLYTPLT 223

Query: 199 LDIQLVMR--SLVLTDSLNDVLIWGPATTGKYSVNSGYNWLLHLDTDAHDQQASWTWVWK 26
            D++ ++    L+L   + D   W  +  G Y+ +SGY+WLL      +    SW W+W 
Sbjct: 224 TDMKNLISHYHLILNIGVLDCFTWNGSLDGVYTASSGYSWLLK-KKQHNPNNKSWKWIWN 282

Query: 25  LNLPENLR 2
           L  PE ++
Sbjct: 283 LRAPEKIK 290



 Score = 91.3 bits (225), Expect(2) = 8e-39
 Identities = 50/109 (45%), Positives = 60/109 (55%), Gaps = 3/109 (2%)
 Frame = -2

Query: 705 MQNLWLPSGICAQIDSCIKKFIWGGNHS---HWVRWDTVTLPKRCGGLGIHRARETNVAL 535
           MQ  WLPS IC+QID   +KFIW GN +   H V W+ VT  K  GGLG+  ARE N A+
Sbjct: 51  MQISWLPSSICSQIDMMTRKFIWKGNSNKGIHLVGWNVVTQSKEDGGLGVRLAREANTAM 110

Query: 534 LGKHVWEVLHHPSKLWVQLLGCRYLPDHSILDCHIPSHASYTWRSILKA 388
           LGK VW++     K WV +L  +YL     L        S  W SI KA
Sbjct: 111 LGKLVWDLQQQSDKPWVHMLQDKYLDSSHFLTSK-RKFGSPIWNSISKA 158


>GAU21723.1 hypothetical protein TSUD_328480 [Trifolium subterraneum]
          Length = 806

 Score = 96.7 bits (239), Expect(2) = 9e-38
 Identities = 49/130 (37%), Positives = 72/130 (55%)
 Frame = -1

Query: 391 SGXKDGFLWRLGKGDCSLWYDRWLKQGPICDKIPFVDIHDLSMRVRDVFHEGHWQFDRSY 212
           S  K+GF +RLG G+ S WY  W   G I +++ FVDIHDL MRVRDV+ +G+WQF+  Y
Sbjct: 602 SALKEGFHFRLGNGNSSFWYSNWSGNGVIANQVMFVDIHDLEMRVRDVYTDGNWQFNLLY 661

Query: 211 THIPLDIQLVMRSLVLTDSLNDVLIWGPATTGKYSVNSGYNWLLHLDTDAHDQQASWTWV 32
           T++P +I+  + S  +  +LN              VN  Y W           +ASW+W+
Sbjct: 662 TNLPQEIKEKLNSTAI--NLNPF------------VNDCYTW-----------KASWSWL 696

Query: 31  WKLNLPENLR 2
           W +  PE ++
Sbjct: 697 WHVPAPEKIK 706



 Score = 89.0 bits (219), Expect(2) = 9e-38
 Identities = 43/109 (39%), Positives = 62/109 (56%), Gaps = 3/109 (2%)
 Frame = -2

Query: 705 MQNLWLPSGICAQIDSCIKKFIWGGNHS---HWVRWDTVTLPKRCGGLGIHRARETNVAL 535
           MQ  WLP   C  ID   + FIW G+     H V WD +T  K+ GG+GI +AR+ N +L
Sbjct: 492 MQIAWLPQTTCDVIDRTTRNFIWKGSSDIGIHLVGWDKITKSKKLGGVGIRKARDANTSL 551

Query: 534 LGKHVWEVLHHPSKLWVQLLGCRYLPDHSILDCHIPSHASYTWRSILKA 388
           LGK VW +  +   LWV+++  +YL + ++L+       S TW +I KA
Sbjct: 552 LGKLVWNIHQNSDALWVKVIQHKYLKEENLLNLTNNKTGSVTWNAIRKA 600


>KYP37151.1 Putative ribonuclease H protein At1g65750 family [Cajanus cajan]
          Length = 1560

 Score =  103 bits (258), Expect(2) = 2e-37
 Identities = 53/111 (47%), Positives = 68/111 (61%), Gaps = 4/111 (3%)
 Frame = -2

Query: 708  SMQNLWLPSGICAQIDSCIKKFIWG--GNHSHW--VRWDTVTLPKRCGGLGIHRARETNV 541
            SMQ +WLP  +C +ID   ++ +W    N   W  VRWD VT P+  GGLG+  AR+ NV
Sbjct: 1049 SMQTMWLPQAVCNRIDQACRRMLWAKSDNTRFWSLVRWDVVTQPQELGGLGVREARKVNV 1108

Query: 540  ALLGKHVWEVLHHPSKLWVQLLGCRYLPDHSILDCHIPSHASYTWRSILKA 388
            +LLGK VW++L  P K WVQLL   YL  +SIL       AS TW S++KA
Sbjct: 1109 SLLGKLVWDMLTAPQKPWVQLLSDCYLHGNSILCAPNRKGASPTWSSLIKA 1159



 Score = 80.1 bits (196), Expect(2) = 2e-37
 Identities = 46/130 (35%), Positives = 69/130 (53%), Gaps = 3/130 (2%)
 Frame = -1

Query: 382  KDGFLWRLGKGDCSLWYDRWLKQGPICDKIPFVDIHDLSMRVRDVFHEGHWQFDRSYTHI 203
            ++GF   LG G  SLWY  W   G  C K+PFV I D +  V D +  G+W F   +  +
Sbjct: 1164 REGFEPHLGSGASSLWYKDWSGTGLWCQKVPFVHIADTNKTVADCWVSGNWNFTALHIVL 1223

Query: 202  PLDIQLVMRSL-VLTDSLN-DVLIWGPATTGKYSVNSGYNWLLH-LDTDAHDQQASWTWV 32
            P ++ L+++ L V+  SL  D  +W   ++G Y+ +SGY +L   L T   D    W   
Sbjct: 1224 PAELLLLVQRLSVVNSSLGLDHFVWRGDSSGCYTASSGYRFLTTVLPTGGED---VWKKA 1280

Query: 31   WKLNLPENLR 2
            WKL +PE ++
Sbjct: 1281 WKLRIPEKVK 1290


>KYP70291.1 Putative ribonuclease H protein At1g65750 family [Cajanus cajan]
          Length = 550

 Score =  102 bits (254), Expect(2) = 7e-37
 Identities = 53/111 (47%), Positives = 64/111 (57%), Gaps = 4/111 (3%)
 Frame = -2

Query: 708 SMQNLWLPSGICAQIDSCIKKFIWG--GNHSHW--VRWDTVTLPKRCGGLGIHRARETNV 541
           SMQ+LWLP  +C +ID   ++ +W    N   W  V WD VT PK  GGLG+  AR  NV
Sbjct: 157 SMQSLWLPQAVCNRIDQACRRMLWAKADNTRFWSPVSWDVVTQPKELGGLGVREARRVNV 216

Query: 540 ALLGKHVWEVLHHPSKLWVQLLGCRYLPDHSILDCHIPSHASYTWRSILKA 388
           +LLGK VW++L  P K WV LL   YL   SIL       AS  W SI+KA
Sbjct: 217 SLLGKLVWDMLSAPQKPWVNLLSSLYLHGESILCAQNKRGASPIWSSIMKA 267



 Score = 80.1 bits (196), Expect(2) = 7e-37
 Identities = 44/129 (34%), Positives = 68/129 (52%), Gaps = 2/129 (1%)
 Frame = -1

Query: 382 KDGFLWRLGKGDCSLWYDRWLKQGPICDKIPFVDIHDLSMRVRDVFHEGHWQFDRSYTHI 203
           ++GF   LG G  SLWY  W   G  C K+PFV I D +  V D +  G W F+  YT +
Sbjct: 272 REGFQPYLGSGASSLWYTDWSGNGLWCGKVPFVHIADTNKTVADCWVSGQWSFNALYTVL 331

Query: 202 PLDIQLVMRSLVLTDSL--NDVLIWGPATTGKYSVNSGYNWLLHLDTDAHDQQASWTWVW 29
           P ++   ++ L + +S    D  +W   T+G Y+  SGY++L      A +  A W  +W
Sbjct: 332 PTELMNSVQQLRVANSPLGLDHFVWRSDTSGCYTAASGYHFL--TPGLAAEGDAVWKKLW 389

Query: 28  KLNLPENLR 2
           K+ +PE ++
Sbjct: 390 KIMIPEKVK 398


>KYP70287.1 Putative ribonuclease H protein At1g65750 family [Cajanus cajan]
          Length = 425

 Score =  102 bits (254), Expect(2) = 7e-37
 Identities = 53/111 (47%), Positives = 64/111 (57%), Gaps = 4/111 (3%)
 Frame = -2

Query: 708 SMQNLWLPSGICAQIDSCIKKFIWG--GNHSHW--VRWDTVTLPKRCGGLGIHRARETNV 541
           SMQ+LWLP  +C +ID   ++ +W    N   W  V WD VT PK  GGLG+  AR  NV
Sbjct: 36  SMQSLWLPQAVCNRIDQACRRMLWAKADNTRFWSPVSWDVVTQPKELGGLGVREARRVNV 95

Query: 540 ALLGKHVWEVLHHPSKLWVQLLGCRYLPDHSILDCHIPSHASYTWRSILKA 388
           +LLGK VW++L  P K WV LL   YL   SIL       AS  W SI+KA
Sbjct: 96  SLLGKLVWDMLSAPQKPWVNLLSSLYLHGESILCAQNKRGASPIWSSIMKA 146



 Score = 80.1 bits (196), Expect(2) = 7e-37
 Identities = 44/129 (34%), Positives = 68/129 (52%), Gaps = 2/129 (1%)
 Frame = -1

Query: 382 KDGFLWRLGKGDCSLWYDRWLKQGPICDKIPFVDIHDLSMRVRDVFHEGHWQFDRSYTHI 203
           ++GF   LG G  SLWY  W   G  C K+PFV I D +  V D +  G W F+  YT +
Sbjct: 151 REGFQPYLGSGASSLWYTDWSGNGLWCGKVPFVHIADTNKTVADCWVSGQWSFNALYTVL 210

Query: 202 PLDIQLVMRSLVLTDSL--NDVLIWGPATTGKYSVNSGYNWLLHLDTDAHDQQASWTWVW 29
           P ++   ++ L + +S    D  +W   T+G Y+  SGY++L      A +  A W  +W
Sbjct: 211 PTELMNSVQQLRVANSPLGLDHFVWRSDTSGCYTAASGYHFL--TPGLAAEGDAVWKKLW 268

Query: 28  KLNLPENLR 2
           K+ +PE ++
Sbjct: 269 KIMIPEKVK 277


>KYP70284.1 Putative ribonuclease H protein At1g65750 family [Cajanus cajan]
          Length = 499

 Score =  100 bits (250), Expect(2) = 2e-36
 Identities = 52/110 (47%), Positives = 63/110 (57%), Gaps = 4/110 (3%)
 Frame = -2

Query: 705 MQNLWLPSGICAQIDSCIKKFIWG--GNHSHW--VRWDTVTLPKRCGGLGIHRARETNVA 538
           MQ+LWLP  +C +ID   ++ +W    N   W  V WD VT PK  GGLG+  AR  NV+
Sbjct: 1   MQSLWLPQAVCNRIDQACRRMLWAKADNTRFWSPVSWDVVTQPKELGGLGVREARRVNVS 60

Query: 537 LLGKHVWEVLHHPSKLWVQLLGCRYLPDHSILDCHIPSHASYTWRSILKA 388
           LLGK VW++L  P K WV LL   YL   SIL       AS  W SI+KA
Sbjct: 61  LLGKLVWDMLSAPQKPWVNLLSSLYLHGESILCAQNKRGASPIWSSIMKA 110



 Score = 80.1 bits (196), Expect(2) = 2e-36
 Identities = 44/129 (34%), Positives = 68/129 (52%), Gaps = 2/129 (1%)
 Frame = -1

Query: 382 KDGFLWRLGKGDCSLWYDRWLKQGPICDKIPFVDIHDLSMRVRDVFHEGHWQFDRSYTHI 203
           ++GF   LG G  SLWY  W   G  C K+PFV I D +  V D +  G W F+  YT +
Sbjct: 115 REGFQPYLGSGASSLWYTDWSGNGLWCGKVPFVHIADTNKTVADCWVSGQWSFNALYTVL 174

Query: 202 PLDIQLVMRSLVLTDSL--NDVLIWGPATTGKYSVNSGYNWLLHLDTDAHDQQASWTWVW 29
           P ++   ++ L + +S    D  +W   T+G Y+  SGY++L      A +  A W  +W
Sbjct: 175 PTELMNSVQQLRVANSPLGLDHFVWRSDTSGCYTAASGYHFL--TPGLAAEGDAVWKKLW 232

Query: 28  KLNLPENLR 2
           K+ +PE ++
Sbjct: 233 KIMIPEKVK 241


>KYP43190.1 Putative ribonuclease H protein At1g65750 family [Cajanus cajan]
          Length = 509

 Score = 93.6 bits (231), Expect(2) = 5e-36
 Identities = 48/110 (43%), Positives = 62/110 (56%), Gaps = 4/110 (3%)
 Frame = -2

Query: 708 SMQNLWLPSGICAQIDSCIKKFIWGGNHS--HW--VRWDTVTLPKRCGGLGIHRARETNV 541
           SMQ LWLP  +C +ID   ++ +W  +     W  V WD VT P   GGLG+  AR  NV
Sbjct: 198 SMQTLWLPQAVCNRIDQACRRMLWAKSDCARFWSPVSWDVVTQPLTFGGLGVREARRVNV 257

Query: 540 ALLGKHVWEVLHHPSKLWVQLLGCRYLPDHSILDCHIPSHASYTWRSILK 391
           +LLGK +W++L  P K WV +L   YL   SIL       AS TW S++K
Sbjct: 258 SLLGKLIWDLLTAPQKPWVHILSNIYLHGESILCAQNRRGASPTWSSLIK 307



 Score = 86.3 bits (212), Expect(2) = 5e-36
 Identities = 51/129 (39%), Positives = 66/129 (51%), Gaps = 2/129 (1%)
 Frame = -1

Query: 382 KDGFLWRLGKGDCSLWYDRWLKQGPICDKIPFVDIHDLSMRVRDVFHEGHWQFDRSYTHI 203
           ++GF   LG G  SLWY  W   G  C ++PFV I D +  V D +  GHW F   YT I
Sbjct: 313 REGFEPHLGSGASSLWYTDWSGAGLWCGRVPFVHIADTNRTVADCWVSGHWDFTSLYTAI 372

Query: 202 PLD-IQLVMRSLVLTDSLN-DVLIWGPATTGKYSVNSGYNWLLHLDTDAHDQQASWTWVW 29
           P + I  V R  V T SL  D   W   ++G Y+  SGY +L    T   D+   W  +W
Sbjct: 373 PAELIHSVQRLTVATSSLELDHFAWRGDSSGCYTAASGYRFLTTCLTTEGDE--VWKKLW 430

Query: 28  KLNLPENLR 2
           KL LPE ++
Sbjct: 431 KLMLPEKVK 439


>KYP52841.1 Putative ribonuclease H protein At1g65750 family [Cajanus cajan]
          Length = 447

 Score = 94.0 bits (232), Expect(2) = 5e-36
 Identities = 46/130 (35%), Positives = 72/130 (55%), Gaps = 4/130 (3%)
 Frame = -1

Query: 382 KDGFLWRLGKGDCSLWYDRWLKQGPICDKIPFVDIHDLSMRVRDVFHEGHWQFDRSYTHI 203
           +DG + +LG G+  +W D W+ + P+   +P+VDIHD  +RV+D +    W+ D+ YT +
Sbjct: 317 EDGLVLKLGNGEIDVWKDVWVGKEPLATSVPWVDIHDSGLRVKDTWDGTSWRLDQLYTPL 376

Query: 202 PLDIQLVMRSLV--LTDSLNDVLIWGPATTGKYSVNSGYNWLLHLDTDAH--DQQASWTW 35
              ++L +  L   L   + ++  W P  +GKY V S Y WL    T  H  +  A W W
Sbjct: 377 FEALRLKISCLTPHLVVGVPNLWTWAPDISGKYMVRSTYRWL----TKDHGLETSAGWNW 432

Query: 34  VWKLNLPENL 5
           +WKL LP +L
Sbjct: 433 IWKLPLPASL 442



 Score = 85.9 bits (211), Expect(2) = 5e-36
 Identities = 47/109 (43%), Positives = 61/109 (55%), Gaps = 3/109 (2%)
 Frame = -2

Query: 705 MQNLWLPSGICAQIDSCIKKFIW---GGNHSHWVRWDTVTLPKRCGGLGIHRARETNVAL 535
           M+  W P  IC  ID  ++ F W    G   H V WD +T PK C GLGI  AR  N AL
Sbjct: 205 MKLYWYPQYICDFIDKSVRSFNWYSREGKGPHMVGWDKLTRPKNCCGLGIRTARNQNTAL 264

Query: 534 LGKHVWEVLHHPSKLWVQLLGCRYLPDHSILDCHIPSHASYTWRSILKA 388
           LGK VW++L   ++LWV +L  +YL   S+      S  S TWR+I++A
Sbjct: 265 LGKLVWDLLRPTNQLWVSVLKDKYLLQDSLFLSRKKS-GSPTWRAIIQA 312


>KHN20047.1 Putative ribonuclease H protein, partial [Glycine soja]
          Length = 220

 Score =  135 bits (341), Expect = 5e-36
 Identities = 61/120 (50%), Positives = 83/120 (69%), Gaps = 2/120 (1%)
 Frame = -2

Query: 705 MQNLWLPSGICAQIDSCIKKFIWGGNHSHWVRWDTVTLPKRCGGLGIHRARETNVALLGK 526
           M N W P GIC QID  ++ FIWG + SHWV W+T+T  +  GGLG+ +ARE N++LLGK
Sbjct: 59  MHNCWRPEGICHQIDQTVRGFIWGSSTSHWVPWETITQSRARGGLGVRKAREANISLLGK 118

Query: 525 HVWEVLHHPSKLWVQLLGCRYLPDHSILDCHIPSHASYTWRSILKAA--XKMVFFGGLGK 352
           H+WEV+H+P KLWV+L+  +YL  +SI+    P  A++TW SILKA    K  FF  +G+
Sbjct: 119 HIWEVIHNPDKLWVKLMTNKYLNHNSIVQSMSPRGATFTWSSILKATDFLKDGFFIRIGR 178



 Score = 64.7 bits (156), Expect = 5e-09
 Identities = 24/51 (47%), Positives = 37/51 (72%)
 Frame = -1

Query: 382 KDGFLWRLGKGDCSLWYDRWLKQGPICDKIPFVDIHDLSMRVRDVFHEGHW 230
           KDGF  R+G+GD SLWY +WL +G +C K+ +V+  D  +RV+D+++ G W
Sbjct: 169 KDGFFIRIGRGDVSLWYGKWLLEGYLCSKVLYVNYQDTHLRVKDLWNNGSW 219


>GAU51664.1 hypothetical protein TSUD_268670 [Trifolium subterraneum]
          Length = 1231

 Score =  103 bits (257), Expect(2) = 8e-36
 Identities = 51/134 (38%), Positives = 72/134 (53%), Gaps = 4/134 (2%)
 Frame = -1

Query: 403  INSESGXKDGFLWRLGKGDCSLWYDRWLKQGPICDKIPFVDIHDLSMRVRDVFHEGHWQF 224
            I +++  KDGF WR G G  S W+  W   G +   +P+VDIHDL + V+DV        
Sbjct: 920  IRAKNILKDGFTWRAGSGSSSFWFSPWSSLGYLGTLVPYVDIHDLHLTVKDVLASNSPHS 979

Query: 223  DRSYTHIPLDIQLVMRSLVL--TDSLNDVLIWGPATTGKYSVNSGYNWLLHLDTDAHDQQ 50
               YT +P     ++ +L +   DS++DV IW     G Y+  SGY+WLL  +  A    
Sbjct: 980  QILYTQLPPSASDLINNLNIRFNDSIDDVFIWSNNKNGSYTTKSGYSWLLSQNGSATTPS 1039

Query: 49   --ASWTWVWKLNLP 14
               SWTW+WKL+LP
Sbjct: 1040 LPLSWTWIWKLHLP 1053



 Score = 75.5 bits (184), Expect(2) = 8e-36
 Identities = 37/78 (47%), Positives = 48/78 (61%)
 Frame = -2

Query: 621  HWVRWDTVTLPKRCGGLGIHRARETNVALLGKHVWEVLHHPSKLWVQLLGCRYLPDHSIL 442
            H V WD +  PK  GGLGI  ARE N+ LLGK VW+++   +KLWV LL  +Y    +IL
Sbjct: 845  HLVGWDKIARPKIQGGLGIRPAREANICLLGKLVWDMVQSSNKLWVNLLSKKYTTGSTIL 904

Query: 441  DCHIPSHASYTWRSILKA 388
                 S+AS  W SI++A
Sbjct: 905  QASSLSNASPIWSSIIRA 922