BLASTX nr result

ID: Glycyrrhiza36_contig00002736 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza36_contig00002736
         (305 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_004497514.1 PREDICTED: 29 kDa ribonucleoprotein A, chloroplas...    64   4e-10
GAU48474.1 hypothetical protein TSUD_405670 [Trifolium subterran...    64   8e-10
KHN48247.1 Ribonucleoprotein, chloroplastic [Glycine soja]             57   1e-07
NP_001240946.1 uncharacterized protein LOC100812934 [Glycine max...    57   1e-07
XP_003535181.1 PREDICTED: 29 kDa ribonucleoprotein A, chloroplas...    57   2e-07
KYP41912.1 hypothetical protein KK1_036683 [Cajanus cajan]             52   9e-06

>XP_004497514.1 PREDICTED: 29 kDa ribonucleoprotein A, chloroplastic [Cicer
           arietinum]
          Length = 284

 Score = 64.3 bits (155), Expect = 4e-10
 Identities = 33/43 (76%), Positives = 38/43 (88%), Gaps = 2/43 (4%)
 Frame = +3

Query: 183 MSTTAASLALPTLRTRKPLCSSPQCLSSR--FSLNPNFKPFSI 305
           MS++AASLALPTLRT++PLC SPQC SS   FS+NPNFKPFSI
Sbjct: 1   MSSSAASLALPTLRTKQPLC-SPQCFSSHPSFSINPNFKPFSI 42


>GAU48474.1 hypothetical protein TSUD_405670 [Trifolium subterraneum]
          Length = 278

 Score = 63.5 bits (153), Expect = 8e-10
 Identities = 32/43 (74%), Positives = 35/43 (81%), Gaps = 2/43 (4%)
 Frame = +3

Query: 183 MSTTAASLALPTLRTRKPLCSSPQCLSS--RFSLNPNFKPFSI 305
           MST+A SLALP+L T+ PLCSSPQC SS    SLNPNFKPFSI
Sbjct: 1   MSTSATSLALPSLFTKNPLCSSPQCFSSLPSLSLNPNFKPFSI 43


>KHN48247.1 Ribonucleoprotein, chloroplastic [Glycine soja]
          Length = 279

 Score = 57.4 bits (137), Expect = 1e-07
 Identities = 32/43 (74%), Positives = 34/43 (79%), Gaps = 2/43 (4%)
 Frame = +3

Query: 183 MSTTAASLALPTL--RTRKPLCSSPQCLSSRFSLNPNFKPFSI 305
           MST+AASLALPTL  RTR+PLCS PQC SS  SL PN KP SI
Sbjct: 1   MSTSAASLALPTLTLRTRQPLCS-PQCFSSSLSLTPNSKPISI 42


>NP_001240946.1 uncharacterized protein LOC100812934 [Glycine max] ACU20155.1
           unknown [Glycine max] KRH19946.1 hypothetical protein
           GLYMA_13G145200 [Glycine max]
          Length = 279

 Score = 57.4 bits (137), Expect = 1e-07
 Identities = 32/43 (74%), Positives = 34/43 (79%), Gaps = 2/43 (4%)
 Frame = +3

Query: 183 MSTTAASLALPTL--RTRKPLCSSPQCLSSRFSLNPNFKPFSI 305
           MST+AASLALPTL  RTR+PLCS PQC SS  SL PN KP SI
Sbjct: 1   MSTSAASLALPTLTLRTRQPLCS-PQCFSSSLSLTPNSKPISI 42


>XP_003535181.1 PREDICTED: 29 kDa ribonucleoprotein A, chloroplastic [Glycine max]
           KRH32548.1 hypothetical protein GLYMA_10G058500 [Glycine
           max]
          Length = 275

 Score = 57.0 bits (136), Expect = 2e-07
 Identities = 32/43 (74%), Positives = 34/43 (79%), Gaps = 2/43 (4%)
 Frame = +3

Query: 183 MSTTAASLALPTL--RTRKPLCSSPQCLSSRFSLNPNFKPFSI 305
           MST+AASLALPTL  RTR+PLCS PQC SS  SL PN KP SI
Sbjct: 1   MSTSAASLALPTLTLRTRQPLCS-PQCFSSSLSLTPNNKPISI 42


>KYP41912.1 hypothetical protein KK1_036683 [Cajanus cajan]
          Length = 279

 Score = 52.4 bits (124), Expect = 9e-06
 Identities = 32/43 (74%), Positives = 34/43 (79%), Gaps = 2/43 (4%)
 Frame = +3

Query: 183 MSTTAASLALP--TLRTRKPLCSSPQCLSSRFSLNPNFKPFSI 305
           MST+AASLALP  TLRTR+PLC SPQC SS  SL PN KP SI
Sbjct: 1   MSTSAASLALPTLTLRTRQPLC-SPQCFSS-LSLAPNSKPISI 41


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