BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza36_contig00002111
         (1240 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_004499937.1 PREDICTED: RNA polymerase sigma factor sigD, chlo...   483   e-167
XP_003599439.1 RNA polymerase sigma factor [Medicago truncatula]...   481   e-166
OIW16887.1 hypothetical protein TanjilG_01752 [Lupinus angustifo...   429   e-146
XP_019427571.1 PREDICTED: RNA polymerase sigma factor sigD, chlo...   429   e-145
GAU38917.1 hypothetical protein TSUD_119830 [Trifolium subterran...   410   e-138
XP_014500709.1 PREDICTED: RNA polymerase sigma factor sigD, chlo...   396   e-133
XP_017424302.1 PREDICTED: RNA polymerase sigma factor sigD, chlo...   392   e-131
XP_007148893.1 hypothetical protein PHAVU_005G023100g [Phaseolus...   391   e-131
XP_007148895.1 hypothetical protein PHAVU_005G023100g [Phaseolus...   391   e-131
XP_017424301.1 PREDICTED: RNA polymerase sigma factor sigD, chlo...   379   e-126
XP_017424300.1 PREDICTED: RNA polymerase sigma factor sigD, chlo...   379   e-126
XP_018817139.1 PREDICTED: RNA polymerase sigma factor sigD, chlo...   373   e-123
CBI24961.3 unnamed protein product, partial [Vitis vinifera]          365   e-122
XP_009354359.1 PREDICTED: RNA polymerase sigma factor sigD, chlo...   369   e-121
XP_002272444.2 PREDICTED: RNA polymerase sigma factor sigD, chlo...   365   e-120
XP_010103268.1 RNA polymerase sigma factor rpoD [Morus notabilis...   363   e-119
XP_007219201.1 hypothetical protein PRUPE_ppa017025mg [Prunus pe...   361   e-118
XP_015881834.1 PREDICTED: RNA polymerase sigma factor sigD, chlo...   357   e-117
XP_004308689.1 PREDICTED: RNA polymerase sigma factor sigD, chlo...   356   e-116
XP_008231483.1 PREDICTED: RNA polymerase sigma factor sigD, chlo...   353   e-115

>XP_004499937.1 PREDICTED: RNA polymerase sigma factor sigD, chloroplastic [Cicer
            arietinum]
          Length = 407

 Score =  483 bits (1244), Expect = e-167
 Identities = 257/342 (75%), Positives = 284/342 (83%)
 Frame = +2

Query: 140  DRSIGFDMXXXXXXXXXXXDLGCLEEEENQIQNNCSRLKLLVGSATAGFLSSTEEAELCL 319
            +++IGFD            +LGC+ EEEN IQNN SR K LVG     FLSS EEAE+CL
Sbjct: 72   EKNIGFDDMRRMRRRKRRKNLGCVVEEEN-IQNNFSREKELVG-----FLSSIEEAEICL 125

Query: 320  GLKEGARIEVSKLRITELEGNPTISRKFAHGNTSLDKVLCTTKESRERLIREYRGLVTSI 499
            GLKEGARIEVSK R+TE EGN +ISR+ AHGNTSLDKVL  T+ES+ERL  EYRGLV SI
Sbjct: 126  GLKEGARIEVSKHRMTEHEGNSSISRRLAHGNTSLDKVLSNTRESKERLAHEYRGLVASI 185

Query: 500  AAGYKGKGLSLHELIQEGTIGLLQGVEKFDPNRGCKLSTYVYWWIKQAIIKAVAMKCRLV 679
            AA Y+GKGLS  +L QEGTIGLL G EKFDPNRGCKLSTYVYWWIKQAI+KA+A K RLV
Sbjct: 186  AARYQGKGLSFQDLTQEGTIGLLHGAEKFDPNRGCKLSTYVYWWIKQAILKALARKSRLV 245

Query: 680  RLPGNKCQMVAKVAKTNNVMRRRLRRKPTYNETAEVLNVNVSTVKLVSERSRPPISLDKA 859
            RLPG K  MV K+A+  NV+ +RLRRKPTYNE AEVLNVNVS VKLVSERSR PISLDKA
Sbjct: 246  RLPGEKYGMVGKIAEAKNVLSKRLRRKPTYNEMAEVLNVNVSIVKLVSERSRQPISLDKA 305

Query: 860  VTDRGHLTLQEIIPGPVEMIPEKMVERQLMKQGVVKLLNMLTKREAEIVMLRFGLNGETP 1039
            V D+G+LTL+EI+PGPVEMIPEKMVERQL KQGVVKLLN L KREAEI+ L FGLNGETP
Sbjct: 306  VFDQGNLTLKEIMPGPVEMIPEKMVERQLKKQGVVKLLNTLNKREAEILRLYFGLNGETP 365

Query: 1040 RSFEEIGRLLKLSRERVRQIHGIALSKLQQTSLVDSLKFYVV 1165
             SFEEIG+ LKLSRER+RQIHGIALSKLQQT+LVDSLKFYVV
Sbjct: 366  LSFEEIGKQLKLSRERIRQIHGIALSKLQQTTLVDSLKFYVV 407


>XP_003599439.1 RNA polymerase sigma factor [Medicago truncatula] AES69690.1 RNA
            polymerase sigma factor [Medicago truncatula]
          Length = 403

 Score =  481 bits (1238), Expect = e-166
 Identities = 253/339 (74%), Positives = 285/339 (84%)
 Frame = +2

Query: 149  IGFDMXXXXXXXXXXXDLGCLEEEENQIQNNCSRLKLLVGSATAGFLSSTEEAELCLGLK 328
            IG D            +LGC+ EEEN IQNN  R K++VGS T+GFLSST+EAELCL LK
Sbjct: 67   IGIDDMRRKRRRKRRKNLGCMVEEEN-IQNNFLRQKVVVGSVTSGFLSSTDEAELCLCLK 125

Query: 329  EGARIEVSKLRITELEGNPTISRKFAHGNTSLDKVLCTTKESRERLIREYRGLVTSIAAG 508
            EGA+IEV+K R+TE EGN  ISR F   NTS+DKVL  T++S+ERL R+YRGLV SIAA 
Sbjct: 126  EGAKIEVAKQRMTEQEGNSAISR-FTLENTSVDKVLINTRKSKERLARDYRGLVASIAAH 184

Query: 509  YKGKGLSLHELIQEGTIGLLQGVEKFDPNRGCKLSTYVYWWIKQAIIKAVAMKCRLVRLP 688
            Y+GKGLS+ +LIQEGTIGLL G EKFDPNRGCKLSTYVYWWIKQ IIKA+A K RL+RLP
Sbjct: 185  YQGKGLSIQDLIQEGTIGLLHGAEKFDPNRGCKLSTYVYWWIKQGIIKALAKKSRLIRLP 244

Query: 689  GNKCQMVAKVAKTNNVMRRRLRRKPTYNETAEVLNVNVSTVKLVSERSRPPISLDKAVTD 868
            G K  MVAK+A+ NNV+RRRLRRKPTYNE AEVLNVNVSTVKLVSERSR PISLD+++TD
Sbjct: 245  GEKYGMVAKIAEANNVLRRRLRRKPTYNEIAEVLNVNVSTVKLVSERSRQPISLDRSITD 304

Query: 869  RGHLTLQEIIPGPVEMIPEKMVERQLMKQGVVKLLNMLTKREAEIVMLRFGLNGETPRSF 1048
            + +L L+EIIPGPVEMIPEKMVERQLMKQGVVKLLN L KRE EIV L FGLNGETP SF
Sbjct: 305  QSNLILKEIIPGPVEMIPEKMVERQLMKQGVVKLLNTLDKREEEIVRLYFGLNGETPLSF 364

Query: 1049 EEIGRLLKLSRERVRQIHGIALSKLQQTSLVDSLKFYVV 1165
            EEIG+LLKLSRER+RQIHGIALSKL+Q +LVDSLKFYVV
Sbjct: 365  EEIGKLLKLSRERIRQIHGIALSKLEQNTLVDSLKFYVV 403


>OIW16887.1 hypothetical protein TanjilG_01752 [Lupinus angustifolius]
          Length = 414

 Score =  429 bits (1104), Expect = e-146
 Identities = 229/347 (65%), Positives = 274/347 (78%), Gaps = 1/347 (0%)
 Frame = +2

Query: 125  WNWKXDRSIGFDMXXXXXXXXXXXDLGCLEEEENQIQNNCSRLKLLVGSATAGFLSSTEE 304
            W ++   SIG D+            L C+EEEE +I +N    +L + S  +G LSS EE
Sbjct: 69   WPFRDRSSIGLDLRRKKRRKRRK-SLECMEEEE-EIYSNSLPDRLSIRSRKSGILSSREE 126

Query: 305  AELCLGLKEGARIEVSKLRITELEGNPTIS-RKFAHGNTSLDKVLCTTKESRERLIREYR 481
            AELCL LKEGA+IE++KLRI E + +P I  R+   GN  LDKVLC T+ESRER+ REYR
Sbjct: 127  AELCLCLKEGAKIELAKLRINESKEHPAIPMRRLVLGNAILDKVLCNTRESRERIAREYR 186

Query: 482  GLVTSIAAGYKGKGLSLHELIQEGTIGLLQGVEKFDPNRGCKLSTYVYWWIKQAIIKAVA 661
            GLV SIA+ Y+GKGLS  +L+QEGTIGLL+G EKFDP+RG KLSTYVYWWIKQAIIKAVA
Sbjct: 187  GLVASIASSYQGKGLSFQDLMQEGTIGLLKGAEKFDPDRGNKLSTYVYWWIKQAIIKAVA 246

Query: 662  MKCRLVRLPGNKCQMVAKVAKTNNVMRRRLRRKPTYNETAEVLNVNVSTVKLVSERSRPP 841
             K RL+RLPG K +M+AK+A+ NNV+ RRLRR P+YNE AE+LNVNVSTVKL+ +R+R P
Sbjct: 247  KKSRLIRLPGGKYEMIAKIAEANNVLSRRLRRVPSYNEMAELLNVNVSTVKLLCQRNRLP 306

Query: 842  ISLDKAVTDRGHLTLQEIIPGPVEMIPEKMVERQLMKQGVVKLLNMLTKREAEIVMLRFG 1021
            ISL+K VTDRG +TLQ+II GP EMIPEKMVER+LMK+ V+KLL  LTKRE +IV L FG
Sbjct: 307  ISLNKVVTDRGTMTLQDIIAGPDEMIPEKMVERELMKEEVLKLLKTLTKREEQIVRLYFG 366

Query: 1022 LNGETPRSFEEIGRLLKLSRERVRQIHGIALSKLQQTSLVDSLKFYV 1162
            LNGETP SFEEIGR+LKLSRERVRQI+GIA+SKLQQT  VDSLKFY+
Sbjct: 367  LNGETPLSFEEIGRVLKLSRERVRQINGIAMSKLQQTKNVDSLKFYL 413


>XP_019427571.1 PREDICTED: RNA polymerase sigma factor sigD, chloroplastic [Lupinus
            angustifolius]
          Length = 433

 Score =  429 bits (1104), Expect = e-145
 Identities = 229/347 (65%), Positives = 274/347 (78%), Gaps = 1/347 (0%)
 Frame = +2

Query: 125  WNWKXDRSIGFDMXXXXXXXXXXXDLGCLEEEENQIQNNCSRLKLLVGSATAGFLSSTEE 304
            W ++   SIG D+            L C+EEEE +I +N    +L + S  +G LSS EE
Sbjct: 88   WPFRDRSSIGLDLRRKKRRKRRK-SLECMEEEE-EIYSNSLPDRLSIRSRKSGILSSREE 145

Query: 305  AELCLGLKEGARIEVSKLRITELEGNPTIS-RKFAHGNTSLDKVLCTTKESRERLIREYR 481
            AELCL LKEGA+IE++KLRI E + +P I  R+   GN  LDKVLC T+ESRER+ REYR
Sbjct: 146  AELCLCLKEGAKIELAKLRINESKEHPAIPMRRLVLGNAILDKVLCNTRESRERIAREYR 205

Query: 482  GLVTSIAAGYKGKGLSLHELIQEGTIGLLQGVEKFDPNRGCKLSTYVYWWIKQAIIKAVA 661
            GLV SIA+ Y+GKGLS  +L+QEGTIGLL+G EKFDP+RG KLSTYVYWWIKQAIIKAVA
Sbjct: 206  GLVASIASSYQGKGLSFQDLMQEGTIGLLKGAEKFDPDRGNKLSTYVYWWIKQAIIKAVA 265

Query: 662  MKCRLVRLPGNKCQMVAKVAKTNNVMRRRLRRKPTYNETAEVLNVNVSTVKLVSERSRPP 841
             K RL+RLPG K +M+AK+A+ NNV+ RRLRR P+YNE AE+LNVNVSTVKL+ +R+R P
Sbjct: 266  KKSRLIRLPGGKYEMIAKIAEANNVLSRRLRRVPSYNEMAELLNVNVSTVKLLCQRNRLP 325

Query: 842  ISLDKAVTDRGHLTLQEIIPGPVEMIPEKMVERQLMKQGVVKLLNMLTKREAEIVMLRFG 1021
            ISL+K VTDRG +TLQ+II GP EMIPEKMVER+LMK+ V+KLL  LTKRE +IV L FG
Sbjct: 326  ISLNKVVTDRGTMTLQDIIAGPDEMIPEKMVERELMKEEVLKLLKTLTKREEQIVRLYFG 385

Query: 1022 LNGETPRSFEEIGRLLKLSRERVRQIHGIALSKLQQTSLVDSLKFYV 1162
            LNGETP SFEEIGR+LKLSRERVRQI+GIA+SKLQQT  VDSLKFY+
Sbjct: 386  LNGETPLSFEEIGRVLKLSRERVRQINGIAMSKLQQTKNVDSLKFYL 432


>GAU38917.1 hypothetical protein TSUD_119830 [Trifolium subterraneum]
          Length = 390

 Score =  410 bits (1053), Expect = e-138
 Identities = 223/342 (65%), Positives = 261/342 (76%)
 Frame = +2

Query: 140  DRSIGFDMXXXXXXXXXXXDLGCLEEEENQIQNNCSRLKLLVGSATAGFLSSTEEAELCL 319
            ++ IG D            +LGC+ E+E+ IQN+    K + GS T GFLSS EEAELCL
Sbjct: 73   EKFIGSDDMRRKRRRKRRKNLGCVMEDES-IQNSFLWQKHVGGSVTPGFLSSIEEAELCL 131

Query: 320  GLKEGARIEVSKLRITELEGNPTISRKFAHGNTSLDKVLCTTKESRERLIREYRGLVTSI 499
             LKEGARIE +K R+TE EGN  ISR+FA  NT++DKVL  T+ES+ERL REYRGLV SI
Sbjct: 132  CLKEGARIEAAKQRMTEHEGNSEISRRFALDNTNVDKVLINTRESKERLAREYRGLVASI 191

Query: 500  AAGYKGKGLSLHELIQEGTIGLLQGVEKFDPNRGCKLSTYVYWWIKQAIIKAVAMKCRLV 679
            AA Y+GKGL + +LIQEGTIGLL G EKFDPNRGCKLSTY                    
Sbjct: 192  AARYQGKGLQIEDLIQEGTIGLLHGAEKFDPNRGCKLSTY-------------------- 231

Query: 680  RLPGNKCQMVAKVAKTNNVMRRRLRRKPTYNETAEVLNVNVSTVKLVSERSRPPISLDKA 859
               G K  MVAK+++ NNV+R+RLRRKPTY+E AEVLNVNVSTVKLVSERSR PISLDKA
Sbjct: 232  ---GEKYGMVAKISEANNVLRKRLRRKPTYDEMAEVLNVNVSTVKLVSERSRQPISLDKA 288

Query: 860  VTDRGHLTLQEIIPGPVEMIPEKMVERQLMKQGVVKLLNMLTKREAEIVMLRFGLNGETP 1039
            +TD G+LT +EIIPGPV+MIPEKMVERQL+K+GV KLLN L KRE EIV L FGL G+TP
Sbjct: 289  LTDHGNLTFKEIIPGPVQMIPEKMVERQLIKEGVAKLLNKLNKREEEIVRLYFGLYGDTP 348

Query: 1040 RSFEEIGRLLKLSRERVRQIHGIALSKLQQTSLVDSLKFYVV 1165
             SFEEIG++LKLSRER+RQI+GIALSK+QQT++VDSLKFYVV
Sbjct: 349  LSFEEIGKVLKLSRERIRQIYGIALSKMQQTTIVDSLKFYVV 390


>XP_014500709.1 PREDICTED: RNA polymerase sigma factor sigD, chloroplastic [Vigna
            radiata var. radiata]
          Length = 351

 Score =  396 bits (1018), Expect = e-133
 Identities = 205/312 (65%), Positives = 250/312 (80%), Gaps = 10/312 (3%)
 Frame = +2

Query: 260  LVGSATAGFLSSTEEAELCLGL----------KEGARIEVSKLRITELEGNPTISRKFAH 409
            +VG   + FLSS EEAELCLGL          K+GA+ EV+K +   LE    I+R+   
Sbjct: 43   IVGFRKSWFLSSREEAELCLGLRVSSDKTQTPKQGAKTEVAKPKTKGLEEPSAITRRSV- 101

Query: 410  GNTSLDKVLCTTKESRERLIREYRGLVTSIAAGYKGKGLSLHELIQEGTIGLLQGVEKFD 589
               SLDK +C  ++++ERL  +YRGLVTSIAAGYKGKGLSL +LIQEGTIGLL+G EKF+
Sbjct: 102  --LSLDKAMCNERQTKERLAHDYRGLVTSIAAGYKGKGLSLQDLIQEGTIGLLRGAEKFE 159

Query: 590  PNRGCKLSTYVYWWIKQAIIKAVAMKCRLVRLPGNKCQMVAKVAKTNNVMRRRLRRKPTY 769
            P RG KLSTYVYWWIKQA+IKAVA K RLVRLPG KC++VAKVA+ NN++  RLRRKPTY
Sbjct: 160  PERGYKLSTYVYWWIKQAMIKAVARKSRLVRLPGGKCELVAKVAQANNILSTRLRRKPTY 219

Query: 770  NETAEVLNVNVSTVKLVSERSRPPISLDKAVTDRGHLTLQEIIPGPVEMIPEKMVERQLM 949
            +ETA+VLNV  ST++LVSE+SR PISLDK VTD GH+TLQEII GP E+ PEKMV+RQLM
Sbjct: 220  DETAKVLNVKTSTIRLVSEKSRAPISLDKVVTDCGHMTLQEIIAGPEEITPEKMVKRQLM 279

Query: 950  KQGVVKLLNMLTKREAEIVMLRFGLNGETPRSFEEIGRLLKLSRERVRQIHGIALSKLQQ 1129
            K+ V+ LL  L+KREAEIV L +GLNG+TPRSF+EIG +++LSRER+RQI+GIALSKL+Q
Sbjct: 280  KEEVMDLLKTLSKREAEIVALHYGLNGDTPRSFKEIGGMMQLSRERIRQINGIALSKLRQ 339

Query: 1130 TSLVDSLKFYVV 1165
            TS +D LKFY+V
Sbjct: 340  TSFIDDLKFYLV 351


>XP_017424302.1 PREDICTED: RNA polymerase sigma factor sigD, chloroplastic isoform X3
            [Vigna angularis]
          Length = 367

 Score =  392 bits (1006), Expect = e-131
 Identities = 203/313 (64%), Positives = 250/313 (79%), Gaps = 11/313 (3%)
 Frame = +2

Query: 260  LVGSATAGFLSSTEEAELCLGLK-----------EGARIEVSKLRITELEGNPTISRKFA 406
            +VG   + FLSS E+AELCLGL+           +GA+ EV+K +   LE    I+R+  
Sbjct: 58   IVGFRKSWFLSSREDAELCLGLRVSSDNTQTPQQQGAKTEVAKPKTKGLEEPSAITRRSV 117

Query: 407  HGNTSLDKVLCTTKESRERLIREYRGLVTSIAAGYKGKGLSLHELIQEGTIGLLQGVEKF 586
                SLDK LC  ++++ERL  +YRGLVTSIAAGY+GKGLSL +LIQEGTIGLL+G EKF
Sbjct: 118  ---LSLDKALCNERQTKERLAHDYRGLVTSIAAGYQGKGLSLQDLIQEGTIGLLRGAEKF 174

Query: 587  DPNRGCKLSTYVYWWIKQAIIKAVAMKCRLVRLPGNKCQMVAKVAKTNNVMRRRLRRKPT 766
            +P RG KLSTYVYWWIKQAIIKAVA K RLVRLPG KC+MVAKVA+ NN++  RL+RKPT
Sbjct: 175  EPERGYKLSTYVYWWIKQAIIKAVARKSRLVRLPGGKCEMVAKVAQANNILSTRLKRKPT 234

Query: 767  YNETAEVLNVNVSTVKLVSERSRPPISLDKAVTDRGHLTLQEIIPGPVEMIPEKMVERQL 946
            Y+ETA+VLNV  ST++LVSE+SR PISLDK VTD GH+TLQEII GP +M PEKMV++ L
Sbjct: 235  YDETAKVLNVKASTIRLVSEKSRAPISLDKVVTDCGHMTLQEIIAGPEDMTPEKMVKKLL 294

Query: 947  MKQGVVKLLNMLTKREAEIVMLRFGLNGETPRSFEEIGRLLKLSRERVRQIHGIALSKLQ 1126
            MK+ V+ LLN L+KREAEIV L +GLNG+TPRSF+EIG +++LSRER+RQI+GIALSKL+
Sbjct: 295  MKEEVMDLLNTLSKREAEIVTLHYGLNGDTPRSFKEIGGMMQLSRERIRQINGIALSKLR 354

Query: 1127 QTSLVDSLKFYVV 1165
            QTS +D LKFY+V
Sbjct: 355  QTSNIDDLKFYLV 367


>XP_007148893.1 hypothetical protein PHAVU_005G023100g [Phaseolus vulgaris]
            ESW20887.1 hypothetical protein PHAVU_005G023100g
            [Phaseolus vulgaris]
          Length = 366

 Score =  391 bits (1005), Expect = e-131
 Identities = 205/312 (65%), Positives = 248/312 (79%), Gaps = 10/312 (3%)
 Frame = +2

Query: 260  LVGSATAGFLSSTEEAELCLGLK----------EGARIEVSKLRITELEGNPTISRKFAH 409
            +VG   + +LSS EEAELCL L+          +GA+ EV+KL    LE +  I      
Sbjct: 58   IVGFRKSWYLSSREEAELCLDLRVSSDKTQTPQQGAKSEVAKLITKGLEEHSAIP---IM 114

Query: 410  GNTSLDKVLCTTKESRERLIREYRGLVTSIAAGYKGKGLSLHELIQEGTIGLLQGVEKFD 589
               SLDK LC  +ES+ERL  +YRGLVTSIAAGY GKGLSL +LIQEGT+GLL+G EKF+
Sbjct: 115  SLLSLDKALCNARESKERLANDYRGLVTSIAAGYLGKGLSLQDLIQEGTVGLLRGAEKFE 174

Query: 590  PNRGCKLSTYVYWWIKQAIIKAVAMKCRLVRLPGNKCQMVAKVAKTNNVMRRRLRRKPTY 769
            P RG KLSTYVYWWIKQA+IKA+A K RLVRLP  K +MVAKVA+ NN++  RLRRKPTY
Sbjct: 175  PERGYKLSTYVYWWIKQAMIKAIARKSRLVRLPSGKSEMVAKVAQANNILSSRLRRKPTY 234

Query: 770  NETAEVLNVNVSTVKLVSERSRPPISLDKAVTDRGHLTLQEIIPGPVEMIPEKMVERQLM 949
            +ETAEVLNV  ST++LVSE+SR PISLDK VTD GH+TLQEIIPGP +M PEKMV+RQLM
Sbjct: 235  DETAEVLNVKASTIRLVSEKSRKPISLDKVVTDCGHMTLQEIIPGPEDMTPEKMVKRQLM 294

Query: 950  KQGVVKLLNMLTKREAEIVMLRFGLNGETPRSFEEIGRLLKLSRERVRQIHGIALSKLQQ 1129
            KQ V+KLLN L+KREAEIV L +GLNGETP +F+EIG +++LSRER+RQI+GIALSKL+Q
Sbjct: 295  KQEVMKLLNTLSKREAEIVTLYYGLNGETPLTFKEIGGMMQLSRERIRQINGIALSKLRQ 354

Query: 1130 TSLVDSLKFYVV 1165
            TS++D+LKFY+V
Sbjct: 355  TSIIDNLKFYLV 366


>XP_007148895.1 hypothetical protein PHAVU_005G023100g [Phaseolus vulgaris]
            ESW20889.1 hypothetical protein PHAVU_005G023100g
            [Phaseolus vulgaris]
          Length = 367

 Score =  391 bits (1004), Expect = e-131
 Identities = 205/313 (65%), Positives = 248/313 (79%), Gaps = 11/313 (3%)
 Frame = +2

Query: 260  LVGSATAGFLSSTEEAELCLGLK-----------EGARIEVSKLRITELEGNPTISRKFA 406
            +VG   + +LSS EEAELCL L+           +GA+ EV+KL    LE +  I     
Sbjct: 58   IVGFRKSWYLSSREEAELCLDLRVSSDKTQTPQQQGAKSEVAKLITKGLEEHSAIP---I 114

Query: 407  HGNTSLDKVLCTTKESRERLIREYRGLVTSIAAGYKGKGLSLHELIQEGTIGLLQGVEKF 586
                SLDK LC  +ES+ERL  +YRGLVTSIAAGY GKGLSL +LIQEGT+GLL+G EKF
Sbjct: 115  MSLLSLDKALCNARESKERLANDYRGLVTSIAAGYLGKGLSLQDLIQEGTVGLLRGAEKF 174

Query: 587  DPNRGCKLSTYVYWWIKQAIIKAVAMKCRLVRLPGNKCQMVAKVAKTNNVMRRRLRRKPT 766
            +P RG KLSTYVYWWIKQA+IKA+A K RLVRLP  K +MVAKVA+ NN++  RLRRKPT
Sbjct: 175  EPERGYKLSTYVYWWIKQAMIKAIARKSRLVRLPSGKSEMVAKVAQANNILSSRLRRKPT 234

Query: 767  YNETAEVLNVNVSTVKLVSERSRPPISLDKAVTDRGHLTLQEIIPGPVEMIPEKMVERQL 946
            Y+ETAEVLNV  ST++LVSE+SR PISLDK VTD GH+TLQEIIPGP +M PEKMV+RQL
Sbjct: 235  YDETAEVLNVKASTIRLVSEKSRKPISLDKVVTDCGHMTLQEIIPGPEDMTPEKMVKRQL 294

Query: 947  MKQGVVKLLNMLTKREAEIVMLRFGLNGETPRSFEEIGRLLKLSRERVRQIHGIALSKLQ 1126
            MKQ V+KLLN L+KREAEIV L +GLNGETP +F+EIG +++LSRER+RQI+GIALSKL+
Sbjct: 295  MKQEVMKLLNTLSKREAEIVTLYYGLNGETPLTFKEIGGMMQLSRERIRQINGIALSKLR 354

Query: 1127 QTSLVDSLKFYVV 1165
            QTS++D+LKFY+V
Sbjct: 355  QTSIIDNLKFYLV 367


>XP_017424301.1 PREDICTED: RNA polymerase sigma factor sigD, chloroplastic isoform X2
            [Vigna angularis]
          Length = 389

 Score =  379 bits (973), Expect = e-126
 Identities = 203/335 (60%), Positives = 250/335 (74%), Gaps = 33/335 (9%)
 Frame = +2

Query: 260  LVGSATAGFLSSTEEAELCLGLK----------EGARIEVSKLRITELEGNPTISRKFAH 409
            +VG   + FLSS E+AELCLGL+          +GA+ EV+K +   LE    I+R+   
Sbjct: 58   IVGFRKSWFLSSREDAELCLGLRVSSDNTQTPQQGAKTEVAKPKTKGLEEPSAITRRSV- 116

Query: 410  GNTSLDKVLCTTKESRERLIREYRGLVTSIAAGYKGKGLSLHELIQEGTIGLLQGVEKFD 589
               SLDK LC  ++++ERL  +YRGLVTSIAAGY+GKGLSL +LIQEGTIGLL+G EKF+
Sbjct: 117  --LSLDKALCNERQTKERLAHDYRGLVTSIAAGYQGKGLSLQDLIQEGTIGLLRGAEKFE 174

Query: 590  PNRGCKLSTYVYWWIKQAIIKAVAMKCRLVRLP-----------------------GNKC 700
            P RG KLSTYVYWWIKQAIIKAVA K RLVRLP                       G KC
Sbjct: 175  PERGYKLSTYVYWWIKQAIIKAVARKSRLVRLPLLTQKDLKSGLVIMNSWLVCDLQGGKC 234

Query: 701  QMVAKVAKTNNVMRRRLRRKPTYNETAEVLNVNVSTVKLVSERSRPPISLDKAVTDRGHL 880
            +MVAKVA+ NN++  RL+RKPTY+ETA+VLNV  ST++LVSE+SR PISLDK VTD GH+
Sbjct: 235  EMVAKVAQANNILSTRLKRKPTYDETAKVLNVKASTIRLVSEKSRAPISLDKVVTDCGHM 294

Query: 881  TLQEIIPGPVEMIPEKMVERQLMKQGVVKLLNMLTKREAEIVMLRFGLNGETPRSFEEIG 1060
            TLQEII GP +M PEKMV++ LMK+ V+ LLN L+KREAEIV L +GLNG+TPRSF+EIG
Sbjct: 295  TLQEIIAGPEDMTPEKMVKKLLMKEEVMDLLNTLSKREAEIVTLHYGLNGDTPRSFKEIG 354

Query: 1061 RLLKLSRERVRQIHGIALSKLQQTSLVDSLKFYVV 1165
             +++LSRER+RQI+GIALSKL+QTS +D LKFY+V
Sbjct: 355  GMMQLSRERIRQINGIALSKLRQTSNIDDLKFYLV 389


>XP_017424300.1 PREDICTED: RNA polymerase sigma factor sigD, chloroplastic isoform X1
            [Vigna angularis]
          Length = 390

 Score =  379 bits (972), Expect = e-126
 Identities = 203/336 (60%), Positives = 250/336 (74%), Gaps = 34/336 (10%)
 Frame = +2

Query: 260  LVGSATAGFLSSTEEAELCLGLK-----------EGARIEVSKLRITELEGNPTISRKFA 406
            +VG   + FLSS E+AELCLGL+           +GA+ EV+K +   LE    I+R+  
Sbjct: 58   IVGFRKSWFLSSREDAELCLGLRVSSDNTQTPQQQGAKTEVAKPKTKGLEEPSAITRRSV 117

Query: 407  HGNTSLDKVLCTTKESRERLIREYRGLVTSIAAGYKGKGLSLHELIQEGTIGLLQGVEKF 586
                SLDK LC  ++++ERL  +YRGLVTSIAAGY+GKGLSL +LIQEGTIGLL+G EKF
Sbjct: 118  ---LSLDKALCNERQTKERLAHDYRGLVTSIAAGYQGKGLSLQDLIQEGTIGLLRGAEKF 174

Query: 587  DPNRGCKLSTYVYWWIKQAIIKAVAMKCRLVRLP-----------------------GNK 697
            +P RG KLSTYVYWWIKQAIIKAVA K RLVRLP                       G K
Sbjct: 175  EPERGYKLSTYVYWWIKQAIIKAVARKSRLVRLPLLTQKDLKSGLVIMNSWLVCDLQGGK 234

Query: 698  CQMVAKVAKTNNVMRRRLRRKPTYNETAEVLNVNVSTVKLVSERSRPPISLDKAVTDRGH 877
            C+MVAKVA+ NN++  RL+RKPTY+ETA+VLNV  ST++LVSE+SR PISLDK VTD GH
Sbjct: 235  CEMVAKVAQANNILSTRLKRKPTYDETAKVLNVKASTIRLVSEKSRAPISLDKVVTDCGH 294

Query: 878  LTLQEIIPGPVEMIPEKMVERQLMKQGVVKLLNMLTKREAEIVMLRFGLNGETPRSFEEI 1057
            +TLQEII GP +M PEKMV++ LMK+ V+ LLN L+KREAEIV L +GLNG+TPRSF+EI
Sbjct: 295  MTLQEIIAGPEDMTPEKMVKKLLMKEEVMDLLNTLSKREAEIVTLHYGLNGDTPRSFKEI 354

Query: 1058 GRLLKLSRERVRQIHGIALSKLQQTSLVDSLKFYVV 1165
            G +++LSRER+RQI+GIALSKL+QTS +D LKFY+V
Sbjct: 355  GGMMQLSRERIRQINGIALSKLRQTSNIDDLKFYLV 390


>XP_018817139.1 PREDICTED: RNA polymerase sigma factor sigD, chloroplastic isoform X1
            [Juglans regia]
          Length = 426

 Score =  373 bits (958), Expect = e-123
 Identities = 195/320 (60%), Positives = 248/320 (77%), Gaps = 3/320 (0%)
 Frame = +2

Query: 215  EEENQIQNNCSRLKLLVGSATAGFLSSTEEAELCLGLKEGARIEVSKLRITELEGNPTIS 394
            E +N + +  SR     GS  +  LSS EEAELCL +KEGAR+EV+  RIT+ +G    S
Sbjct: 112  EGKNGVGSRSSR-----GSVKSRNLSSREEAELCLCVKEGARLEVASTRITKAQGRQPTS 166

Query: 395  RKFAHG---NTSLDKVLCTTKESRERLIREYRGLVTSIAAGYKGKGLSLHELIQEGTIGL 565
            ++ A       S+DK+LC  ++SRER+ R YR LV SIA GY+GKGLS  +LIQEG+IGL
Sbjct: 167  KQLAKAIGMERSVDKILCDGRDSRERISRSYRRLVVSIAKGYQGKGLSFRDLIQEGSIGL 226

Query: 566  LQGVEKFDPNRGCKLSTYVYWWIKQAIIKAVAMKCRLVRLPGNKCQMVAKVAKTNNVMRR 745
            L+GVEKF+P RG +LSTYVYWWIKQAIIKA+A + R+VRLPG+ C+MVA+ A+  N++ +
Sbjct: 227  LRGVEKFEPERGYRLSTYVYWWIKQAIIKAIANESRIVRLPGHMCRMVARTAEARNLLSK 286

Query: 746  RLRRKPTYNETAEVLNVNVSTVKLVSERSRPPISLDKAVTDRGHLTLQEIIPGPVEMIPE 925
            +L R PT++E AEVLNV++S V+LVSER+RPPISLD+A+TD+G +TLQEII GP E  PE
Sbjct: 287  KLGRLPTHDEIAEVLNVHISIVRLVSERNRPPISLDRAITDQGSITLQEIISGPDETTPE 346

Query: 926  KMVERQLMKQGVVKLLNMLTKREAEIVMLRFGLNGETPRSFEEIGRLLKLSRERVRQIHG 1105
            KMV++QLMKQ + KLL  L KRE  I+ L FGLNGE PRS EEIGR+LKLSRER+RQI+G
Sbjct: 347  KMVKKQLMKQELEKLLTSLDKREEHILRLHFGLNGEPPRSCEEIGRMLKLSRERIRQING 406

Query: 1106 IALSKLQQTSLVDSLKFYVV 1165
            IALSKL+QTS+VD L+ Y V
Sbjct: 407  IALSKLRQTSVVDILELYFV 426


>CBI24961.3 unnamed protein product, partial [Vitis vinifera]
          Length = 319

 Score =  365 bits (936), Expect = e-122
 Identities = 189/304 (62%), Positives = 240/304 (78%), Gaps = 4/304 (1%)
 Frame = +2

Query: 266  GSATAGFLSSTEEAELCLGLKEGARIEVSKLRITELEGNPTISRKFAHG----NTSLDKV 433
            G+A +  L+  EEAE CL LKE A +E ++ RI E   +   S ++A       +SLDK+
Sbjct: 16   GAARSAVLTPREEAEFCLCLKEEAGLEAARRRIAETREHEPTSNQWAEAVGIKRSSLDKM 75

Query: 434  LCTTKESRERLIREYRGLVTSIAAGYKGKGLSLHELIQEGTIGLLQGVEKFDPNRGCKLS 613
            LC  +ESRER+ + YR LV SIAA Y+GKGLSL +LIQEG+IGLL+G E+FDP+RG KLS
Sbjct: 76   LCNGRESRERINQSYRRLVVSIAARYQGKGLSLQDLIQEGSIGLLRGAERFDPDRGYKLS 135

Query: 614  TYVYWWIKQAIIKAVAMKCRLVRLPGNKCQMVAKVAKTNNVMRRRLRRKPTYNETAEVLN 793
            TYVYWWI+QAI++A+A K R++RLPG+ C+MVAK+A+   V+ RRLRR PTY+E AE ++
Sbjct: 136  TYVYWWIRQAIVRAIANKSRIIRLPGSICEMVAKIAEARTVLSRRLRRLPTYDEIAEFID 195

Query: 794  VNVSTVKLVSERSRPPISLDKAVTDRGHLTLQEIIPGPVEMIPEKMVERQLMKQGVVKLL 973
            VNVSTV+LVSERSR PIS+D+AVT +G +TLQEIIPGP E  P+KMV+RQLMKQ V + L
Sbjct: 196  VNVSTVRLVSERSRTPISVDQAVTSQGCMTLQEIIPGPDETTPQKMVKRQLMKQEVERAL 255

Query: 974  NMLTKREAEIVMLRFGLNGETPRSFEEIGRLLKLSRERVRQIHGIALSKLQQTSLVDSLK 1153
            N L +REA I+ L FG+NGETP SFEEIGRL+KLSRERVRQI+ IALSKL+QTS+VD LK
Sbjct: 256  NTLCEREAYILRLYFGINGETPLSFEEIGRLMKLSRERVRQINSIALSKLRQTSVVDYLK 315

Query: 1154 FYVV 1165
             Y++
Sbjct: 316  LYMM 319


>XP_009354359.1 PREDICTED: RNA polymerase sigma factor sigD, chloroplastic [Pyrus x
            bretschneideri]
          Length = 436

 Score =  369 bits (946), Expect = e-121
 Identities = 192/325 (59%), Positives = 243/325 (74%), Gaps = 4/325 (1%)
 Frame = +2

Query: 203  GCLEEEENQIQNNCSRLKLLVGSATAGFLSSTEEAELCLGLKEGARIEVSKLRITELEGN 382
            G  EE E  + +     KL  G    G LSS EEAE CL LKEGAR+E  +LR+ E E  
Sbjct: 116  GLGEERERGVGDG----KLSFGLVRCGHLSSKEEAECCLSLKEGARLESRRLRVVEDEEQ 171

Query: 383  PTISRKFAHG----NTSLDKVLCTTKESRERLIREYRGLVTSIAAGYKGKGLSLHELIQE 550
               S++ A        S+DKVLC  +ES+ER+IR YRGL+ S+A+ Y+GKGLS  +LIQE
Sbjct: 172  EPTSKQLAKAMGMKTRSIDKVLCKKRESQERIIRSYRGLIVSVASSYQGKGLSFQDLIQE 231

Query: 551  GTIGLLQGVEKFDPNRGCKLSTYVYWWIKQAIIKAVAMKCRLVRLPGNKCQMVAKVAKTN 730
            G+IGLL+G EKFD  RGCKLSTYVYWWI+QAII+A+  K R++RLP N C M+AK+ K  
Sbjct: 232  GSIGLLRGAEKFDHERGCKLSTYVYWWIRQAIIRALDKKSRIIRLPVNMCGMMAKITKAK 291

Query: 731  NVMRRRLRRKPTYNETAEVLNVNVSTVKLVSERSRPPISLDKAVTDRGHLTLQEIIPGPV 910
            N   +R++R PTY+E A+ +NV+ +TVKLV ERSRPPISLD+ VT +G ++LQEI+ GP 
Sbjct: 292  NSFNQRIQRLPTYDEIAQEVNVHAATVKLVCERSRPPISLDRVVTVQGCMSLQEIMQGPE 351

Query: 911  EMIPEKMVERQLMKQGVVKLLNMLTKREAEIVMLRFGLNGETPRSFEEIGRLLKLSRERV 1090
            EM+PEKM+ +QLMKQ V KLL  L+ REA ++ LRFGL+GETP+SFEEIGRLLKLSRERV
Sbjct: 352  EMMPEKMLTKQLMKQEVEKLLKTLSDREAYVLRLRFGLHGETPKSFEEIGRLLKLSRERV 411

Query: 1091 RQIHGIALSKLQQTSLVDSLKFYVV 1165
            RQI+GIALSKL+QTS  ++LK Y+V
Sbjct: 412  RQINGIALSKLKQTSTFNNLKLYIV 436


>XP_002272444.2 PREDICTED: RNA polymerase sigma factor sigD, chloroplastic isoform X1
            [Vitis vinifera]
          Length = 442

 Score =  365 bits (936), Expect = e-120
 Identities = 189/304 (62%), Positives = 240/304 (78%), Gaps = 4/304 (1%)
 Frame = +2

Query: 266  GSATAGFLSSTEEAELCLGLKEGARIEVSKLRITELEGNPTISRKFAHG----NTSLDKV 433
            G+A +  L+  EEAE CL LKE A +E ++ RI E   +   S ++A       +SLDK+
Sbjct: 139  GAARSAVLTPREEAEFCLCLKEEAGLEAARRRIAETREHEPTSNQWAEAVGIKRSSLDKM 198

Query: 434  LCTTKESRERLIREYRGLVTSIAAGYKGKGLSLHELIQEGTIGLLQGVEKFDPNRGCKLS 613
            LC  +ESRER+ + YR LV SIAA Y+GKGLSL +LIQEG+IGLL+G E+FDP+RG KLS
Sbjct: 199  LCNGRESRERINQSYRRLVVSIAARYQGKGLSLQDLIQEGSIGLLRGAERFDPDRGYKLS 258

Query: 614  TYVYWWIKQAIIKAVAMKCRLVRLPGNKCQMVAKVAKTNNVMRRRLRRKPTYNETAEVLN 793
            TYVYWWI+QAI++A+A K R++RLPG+ C+MVAK+A+   V+ RRLRR PTY+E AE ++
Sbjct: 259  TYVYWWIRQAIVRAIANKSRIIRLPGSICEMVAKIAEARTVLSRRLRRLPTYDEIAEFID 318

Query: 794  VNVSTVKLVSERSRPPISLDKAVTDRGHLTLQEIIPGPVEMIPEKMVERQLMKQGVVKLL 973
            VNVSTV+LVSERSR PIS+D+AVT +G +TLQEIIPGP E  P+KMV+RQLMKQ V + L
Sbjct: 319  VNVSTVRLVSERSRTPISVDQAVTSQGCMTLQEIIPGPDETTPQKMVKRQLMKQEVERAL 378

Query: 974  NMLTKREAEIVMLRFGLNGETPRSFEEIGRLLKLSRERVRQIHGIALSKLQQTSLVDSLK 1153
            N L +REA I+ L FG+NGETP SFEEIGRL+KLSRERVRQI+ IALSKL+QTS+VD LK
Sbjct: 379  NTLCEREAYILRLYFGINGETPLSFEEIGRLMKLSRERVRQINSIALSKLRQTSVVDYLK 438

Query: 1154 FYVV 1165
             Y++
Sbjct: 439  LYMM 442


>XP_010103268.1 RNA polymerase sigma factor rpoD [Morus notabilis] EXB95293.1 RNA
            polymerase sigma factor rpoD [Morus notabilis]
          Length = 422

 Score =  363 bits (932), Expect = e-119
 Identities = 185/306 (60%), Positives = 241/306 (78%), Gaps = 5/306 (1%)
 Frame = +2

Query: 251  LKLLVGSATAGFLSSTEEAELCLGLKEGARIEVSKLRITELEGNPTISRKFAHGN----T 418
            ++  +G    G+LS  EEAE CL LKEGA++E ++LR+T  E +   S++ A        
Sbjct: 111  MRFSIGPMKLGYLSPREEAECCLILKEGAKLEATRLRMTNSEDHEPTSKELAKAMGMEMR 170

Query: 419  SLDKVLCTTKESRERLIREYRGLVTSIAAGYKGKGLSLHELIQEGTIGLLQGVEKFDPNR 598
            S+DK+LC  +ES+ER+ R YR LV S+AAGY+GKGLS  +LIQEG++GLL+G +KFDP R
Sbjct: 171  SIDKMLCDKRESQERISRSYRRLVVSVAAGYQGKGLSFPDLIQEGSVGLLRGAQKFDPQR 230

Query: 599  GCKLSTYVYWWIKQAIIKAVAMKCRLVRLPGNKCQMVAKVAKTNNVMRRRLRRKPTYNET 778
            G KLSTYVYWWI+QAII+A+  K R+VRLPGN C +VAKV + NNV+ +RLRR PTY+E 
Sbjct: 231  GNKLSTYVYWWIRQAIIRAIENKSRVVRLPGNMCGIVAKVTEANNVLNKRLRRFPTYDEI 290

Query: 779  AEVLNVNVSTVKLVSERSRPPISLDKAVTDRGHLTLQEIIPGPVEMIPEKMVERQLMKQG 958
            A+V+ V+VSTV+LVSER RPPISLD+A+T+RG +TLQEIIPGP E+ PEKMV +QLMKQ 
Sbjct: 291  AQVVGVHVSTVRLVSERIRPPISLDRAITERGCMTLQEIIPGPEEISPEKMVRKQLMKQE 350

Query: 959  VVKLL-NMLTKREAEIVMLRFGLNGETPRSFEEIGRLLKLSRERVRQIHGIALSKLQQTS 1135
            + KLL  +L+ REA ++ L FGL+G+ P S EEIGRLLKLSRER+RQI+GIALSKLQQT+
Sbjct: 351  IEKLLKTVLSDREANVLRLHFGLSGDIPLSCEEIGRLLKLSRERIRQINGIALSKLQQTN 410

Query: 1136 LVDSLK 1153
            +V+ L+
Sbjct: 411  IVNDLR 416


>XP_007219201.1 hypothetical protein PRUPE_ppa017025mg [Prunus persica] ONI20543.1
            hypothetical protein PRUPE_2G021900 [Prunus persica]
          Length = 440

 Score =  361 bits (926), Expect = e-118
 Identities = 183/297 (61%), Positives = 231/297 (77%), Gaps = 4/297 (1%)
 Frame = +2

Query: 287  LSSTEEAELCLGLKEGARIEVSKLRITELEGNPTISRKFAHGN----TSLDKVLCTTKES 454
            LS  EEAE CL LKEGAR+E  + R+ E + +   S++ A        S+DKVLC  +ES
Sbjct: 144  LSPREEAECCLSLKEGARLESERFRVVEAQKHEPTSKQLAKAMGMKMRSIDKVLCKRRES 203

Query: 455  RERLIREYRGLVTSIAAGYKGKGLSLHELIQEGTIGLLQGVEKFDPNRGCKLSTYVYWWI 634
            +E++IR YRGLV S+A+ Y+GKGLS  +LIQEG+IGLL+G EKFD  R  KLSTYVYWWI
Sbjct: 204  QEKIIRSYRGLVVSVASSYQGKGLSFQDLIQEGSIGLLRGAEKFDHEREWKLSTYVYWWI 263

Query: 635  KQAIIKAVAMKCRLVRLPGNKCQMVAKVAKTNNVMRRRLRRKPTYNETAEVLNVNVSTVK 814
            +QAII+A+  K R++RLPG+ C M+AK+ K  N + +R +R P+++E AEV+ VN STVK
Sbjct: 264  RQAIIRAIENKSRIIRLPGHVCGMMAKITKAQNSLNQRFQRLPSHDEIAEVIKVNASTVK 323

Query: 815  LVSERSRPPISLDKAVTDRGHLTLQEIIPGPVEMIPEKMVERQLMKQGVVKLLNMLTKRE 994
            LV ERSRPPISLD+  T RG +TLQEII GP EM+PEKM+ RQLMKQ V KLL  L+ RE
Sbjct: 324  LVCERSRPPISLDRVATVRGSMTLQEIIQGPEEMMPEKMLIRQLMKQEVEKLLKTLSDRE 383

Query: 995  AEIVMLRFGLNGETPRSFEEIGRLLKLSRERVRQIHGIALSKLQQTSLVDSLKFYVV 1165
            A ++ L FGLNGE+P+SFEEIGRLLKLSRERVRQI+GIALSKL+QTS++D+LK Y+V
Sbjct: 384  ANVLRLHFGLNGESPQSFEEIGRLLKLSRERVRQINGIALSKLRQTSILDNLKLYIV 440


>XP_015881834.1 PREDICTED: RNA polymerase sigma factor sigD, chloroplastic [Ziziphus
            jujuba]
          Length = 435

 Score =  357 bits (917), Expect = e-117
 Identities = 180/303 (59%), Positives = 236/303 (77%), Gaps = 4/303 (1%)
 Frame = +2

Query: 266  GSATAGFLSSTEEAELCLGLKEGARIEVSKLRITELEGNPTISRKFAHG----NTSLDKV 433
            GS  +G+LS  EE + CL LKEGA +E +++RIT+ + +   S++ A        S+DK+
Sbjct: 130  GSVKSGYLSRREEVDCCLSLKEGAELEATRIRITDAQEHEPTSKQLAKAIGMEMRSVDKM 189

Query: 434  LCTTKESRERLIREYRGLVTSIAAGYKGKGLSLHELIQEGTIGLLQGVEKFDPNRGCKLS 613
            LC  ++S+ER+ R YR LV SIA GY+G+GLSL +LIQEG+IGLL+G  KFDP+RG KLS
Sbjct: 190  LCDRRDSQERIYRSYRRLVVSIAVGYQGRGLSLQDLIQEGSIGLLRGAHKFDPDRGHKLS 249

Query: 614  TYVYWWIKQAIIKAVAMKCRLVRLPGNKCQMVAKVAKTNNVMRRRLRRKPTYNETAEVLN 793
            TYVYWWI+QAII+A+  K RLVRLPGN C MVAK+A+  N + RRLRR PT  E AE ++
Sbjct: 250  TYVYWWIRQAIIRAIEKKSRLVRLPGNMCMMVAKIAEAKNDLSRRLRRAPTCEEIAEAVD 309

Query: 794  VNVSTVKLVSERSRPPISLDKAVTDRGHLTLQEIIPGPVEMIPEKMVERQLMKQGVVKLL 973
            ++VS +KLVSE+SR PISLD+ VTD+G + LQEII GP E +PEKMV ++LMKQ V KLL
Sbjct: 310  MHVSIIKLVSEKSRTPISLDRTVTDQGCMRLQEIIAGPDETMPEKMVMKRLMKQEVKKLL 369

Query: 974  NMLTKREAEIVMLRFGLNGETPRSFEEIGRLLKLSRERVRQIHGIALSKLQQTSLVDSLK 1153
              L+ REA ++ L FGLNG++P++FEEIGR+LKLSRERVRQI+GIALSKL+ TS+VD+L+
Sbjct: 370  KSLSDREAHVLRLHFGLNGKSPQTFEEIGRVLKLSRERVRQINGIALSKLRHTSIVDNLR 429

Query: 1154 FYV 1162
             Y+
Sbjct: 430  LYL 432


>XP_004308689.1 PREDICTED: RNA polymerase sigma factor sigD, chloroplastic [Fragaria
            vesca subsp. vesca]
          Length = 452

 Score =  356 bits (914), Expect = e-116
 Identities = 178/326 (54%), Positives = 244/326 (74%), Gaps = 4/326 (1%)
 Frame = +2

Query: 200  LGCLEEEENQIQNNCSRLKLLVGSATAGFLSSTEEAELCLGLKEGARIEVSKLRITELEG 379
            L C ++EE   +    R     G  + G+LS  EEA+ C+ LKEGA++E  + R TE + 
Sbjct: 129  LECFDDEERNRELEDGRFSF--GVVSYGYLSPREEADCCMSLKEGAKLESERTRFTEAQE 186

Query: 380  NPTISRKFAHGN----TSLDKVLCTTKESRERLIREYRGLVTSIAAGYKGKGLSLHELIQ 547
            +   S++ A+      +S+DKV+C  +ES+ER+I+ YRGLV S+A+ Y+GKGLSL +LIQ
Sbjct: 187  HEPTSKQLANAMRIKMSSIDKVICNRRESQERIIKSYRGLVVSVASSYQGKGLSLQDLIQ 246

Query: 548  EGTIGLLQGVEKFDPNRGCKLSTYVYWWIKQAIIKAVAMKCRLVRLPGNKCQMVAKVAKT 727
            EG+IGLL+G EKFDP RG KLSTYVYWWI+QAII+A+  K R++RLPG+ C ++AK+ + 
Sbjct: 247  EGSIGLLRGAEKFDPERGLKLSTYVYWWIRQAIIRAIENKSRIIRLPGHMCGVMAKITRA 306

Query: 728  NNVMRRRLRRKPTYNETAEVLNVNVSTVKLVSERSRPPISLDKAVTDRGHLTLQEIIPGP 907
                 +R +R P+++E AE++NV  S V+LV ERSR P+SLD+ VTD+G + LQ+II GP
Sbjct: 307  KKNFNQRFQRLPSHDEIAEMINVQASIVRLVCERSRLPLSLDRVVTDQGCMALQDIIRGP 366

Query: 908  VEMIPEKMVERQLMKQGVVKLLNMLTKREAEIVMLRFGLNGETPRSFEEIGRLLKLSRER 1087
             EM+PE M+++QLMKQ + KLLN L+ REAE++ L FGLNG+TP+SFEEIGRLLKLSRER
Sbjct: 367  DEMMPETMLKKQLMKQEMEKLLNRLSDREAEVLRLHFGLNGDTPQSFEEIGRLLKLSRER 426

Query: 1088 VRQIHGIALSKLQQTSLVDSLKFYVV 1165
            VRQI+ IALSKL+QTS ++ LK Y+V
Sbjct: 427  VRQINSIALSKLKQTSTLEDLKLYIV 452


>XP_008231483.1 PREDICTED: RNA polymerase sigma factor sigD, chloroplastic [Prunus
            mume]
          Length = 442

 Score =  353 bits (905), Expect = e-115
 Identities = 181/292 (61%), Positives = 226/292 (77%), Gaps = 4/292 (1%)
 Frame = +2

Query: 287  LSSTEEAELCLGLKEGARIEVSKLRITELEGNPTISRKFAHGN----TSLDKVLCTTKES 454
            LS  EEAE CL LKEGAR+E  + R+ E + +   S++ A        S+DKVLC  +ES
Sbjct: 144  LSPREEAECCLSLKEGARLESERFRVVEAQKHEPTSKQLAKAMGMKMRSIDKVLCKRRES 203

Query: 455  RERLIREYRGLVTSIAAGYKGKGLSLHELIQEGTIGLLQGVEKFDPNRGCKLSTYVYWWI 634
            +E++IR YRGLV S+A+ Y+GKGLS  +LIQEG+IGLL+G EKFD  R  KLSTYVYWWI
Sbjct: 204  QEKIIRSYRGLVVSVASSYQGKGLSFQDLIQEGSIGLLRGAEKFDHERKWKLSTYVYWWI 263

Query: 635  KQAIIKAVAMKCRLVRLPGNKCQMVAKVAKTNNVMRRRLRRKPTYNETAEVLNVNVSTVK 814
            +QAII+A+  K R++RLPG+ C M+AK+ K  N + +RL+R P+++E AEV+ VN STVK
Sbjct: 264  RQAIIRAIENKSRIIRLPGHVCGMMAKITKAQNSLNQRLQRLPSHDELAEVIKVNASTVK 323

Query: 815  LVSERSRPPISLDKAVTDRGHLTLQEIIPGPVEMIPEKMVERQLMKQGVVKLLNMLTKRE 994
            LV ERSRPPISLD+  T RG +TLQEII GP EM+PEKM+ RQLMKQ V KLL  L+ RE
Sbjct: 324  LVCERSRPPISLDRVATVRGSMTLQEIIQGPEEMMPEKMLIRQLMKQEVEKLLKTLSDRE 383

Query: 995  AEIVMLRFGLNGETPRSFEEIGRLLKLSRERVRQIHGIALSKLQQTSLVDSL 1150
            A ++ L FGLNGE+P+SFEEIGRLLKLSRERVRQI+GIALSKL+QTS +D L
Sbjct: 384  ANVLRLHFGLNGESPQSFEEIGRLLKLSRERVRQINGIALSKLRQTSTLDIL 435