BLASTX nr result
ID: Glycyrrhiza35_contig00040841
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza35_contig00040841
(210 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KYP76690.1 Retrovirus-related Pol polyprotein from transposon TN... 95 9e-23
KYP53273.1 Copia protein [Cajanus cajan] 94 2e-22
KYP45673.1 Copia protein [Cajanus cajan] 96 7e-22
GAU30708.1 hypothetical protein TSUD_39320 [Trifolium subterraneum] 97 8e-22
GAU29238.1 hypothetical protein TSUD_362280 [Trifolium subterran... 97 8e-22
KYP37514.1 Retrovirus-related Pol polyprotein from transposon TN... 91 1e-21
KYP36975.1 Retrovirus-related Pol polyprotein from transposon TN... 95 1e-21
KYP61326.1 hypothetical protein KK1_015813 [Cajanus cajan] 92 1e-21
KHN41724.1 Copia protein, partial [Glycine soja] 93 2e-21
KYP46924.1 Copia protein [Cajanus cajan] 92 3e-21
KHN36156.1 Retrovirus-related Pol polyprotein from transposon TN... 95 4e-21
KHN22040.1 Retrovirus-related Pol polyprotein from transposon TN... 95 4e-21
KYP40911.1 Retrovirus-related Pol polyprotein from transposon TN... 92 5e-21
GAU19342.1 hypothetical protein TSUD_336290 [Trifolium subterran... 94 7e-21
KYP44504.1 hypothetical protein KK1_034024 [Cajanus cajan] 92 1e-20
KYP62480.1 Copia protein, partial [Cajanus cajan] 90 1e-20
KYP68417.1 Retrovirus-related Pol polyprotein from transposon TN... 92 1e-20
KYP50410.1 Retrovirus-related Pol polyprotein from transposon TN... 93 2e-20
KYP44325.1 Copia protein [Cajanus cajan] 90 2e-20
KHN21230.1 Retrovirus-related Pol polyprotein from transposon TN... 93 2e-20
>KYP76690.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 211
Score = 95.1 bits (235), Expect = 9e-23
Identities = 46/67 (68%), Positives = 55/67 (82%)
Frame = -2
Query: 206 KPATTSSPFPLYAYSDADWASDPDDRRSTSGYCLFFRHNLISWSFKK*VLVARSTAEAEY 27
+PAT+S+ + L A+ DADWASDPDDRRSTS +C+FF NL+SWS KK LVARS+ EAEY
Sbjct: 88 QPATSSTKYSLEAFCDADWASDPDDRRSTSRFCVFFGPNLVSWSSKKQSLVARSSTEAEY 147
Query: 26 RSMALAT 6
RSMA AT
Sbjct: 148 RSMAHAT 154
>KYP53273.1 Copia protein [Cajanus cajan]
Length = 198
Score = 94.0 bits (232), Expect = 2e-22
Identities = 46/69 (66%), Positives = 54/69 (78%)
Frame = -2
Query: 209 LKPATTSSPFPLYAYSDADWASDPDDRRSTSGYCLFFRHNLISWSFKK*VLVARSTAEAE 30
L+PA +SP ++AY DADWASDPDDRRSTSG +F NLISW KK +VARST EAE
Sbjct: 29 LQPAPPNSPLSIHAYCDADWASDPDDRRSTSGAAIFVGPNLISWWSKKQTVVARSTTEAE 88
Query: 29 YRSMALATS 3
YRS+ALAT+
Sbjct: 89 YRSLALATA 97
>KYP45673.1 Copia protein [Cajanus cajan]
Length = 390
Score = 95.9 bits (237), Expect = 7e-22
Identities = 46/69 (66%), Positives = 56/69 (81%)
Frame = -2
Query: 209 LKPATTSSPFPLYAYSDADWASDPDDRRSTSGYCLFFRHNLISWSFKK*VLVARSTAEAE 30
L+PA T+SP ++AY DADWASDPDDRRSTSG +F NLISW KK ++VARS+ EAE
Sbjct: 221 LQPAPTNSPLSIHAYCDADWASDPDDRRSTSGAAIFVGPNLISWWSKKQIVVARSSTEAE 280
Query: 29 YRSMALATS 3
YRS+ALAT+
Sbjct: 281 YRSLALATA 289
>GAU30708.1 hypothetical protein TSUD_39320 [Trifolium subterraneum]
Length = 1432
Score = 96.7 bits (239), Expect = 8e-22
Identities = 46/69 (66%), Positives = 55/69 (79%)
Frame = -2
Query: 209 LKPATTSSPFPLYAYSDADWASDPDDRRSTSGYCLFFRHNLISWSFKK*VLVARSTAEAE 30
++P+TT PF L AYSDADWA+D DDRRSTSG C++F NL+SWS KK LVARS+ EAE
Sbjct: 1262 IQPSTTGPPFSLRAYSDADWATDQDDRRSTSGSCIYFGPNLVSWSSKKQQLVARSSTEAE 1321
Query: 29 YRSMALATS 3
YRSMA T+
Sbjct: 1322 YRSMANTTA 1330
>GAU29238.1 hypothetical protein TSUD_362280 [Trifolium subterraneum]
Length = 1433
Score = 96.7 bits (239), Expect = 8e-22
Identities = 47/69 (68%), Positives = 55/69 (79%)
Frame = -2
Query: 209 LKPATTSSPFPLYAYSDADWASDPDDRRSTSGYCLFFRHNLISWSFKK*VLVARSTAEAE 30
L P+T+S PF L AYSDADWA+D DDRRSTSG C++F NL+SWS KK LVARS+ EAE
Sbjct: 1263 LHPSTSSPPFSLRAYSDADWATDQDDRRSTSGSCIYFGPNLVSWSSKKQQLVARSSTEAE 1322
Query: 29 YRSMALATS 3
YRSMA T+
Sbjct: 1323 YRSMANTTA 1331
>KYP37514.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 167
Score = 91.3 bits (225), Expect = 1e-21
Identities = 44/69 (63%), Positives = 55/69 (79%)
Frame = -2
Query: 209 LKPATTSSPFPLYAYSDADWASDPDDRRSTSGYCLFFRHNLISWSFKK*VLVARSTAEAE 30
L+PAT+S+ + L + DA+WASDPDDRR TS +C+FF NL+SWS KK LVARS+ EAE
Sbjct: 29 LQPATSSTKYSLEVFCDANWASDPDDRRLTSRFCVFFGPNLVSWSSKKQSLVARSSTEAE 88
Query: 29 YRSMALATS 3
YRSMA AT+
Sbjct: 89 YRSMAHATA 97
>KYP36975.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 334
Score = 94.7 bits (234), Expect = 1e-21
Identities = 45/69 (65%), Positives = 56/69 (81%)
Frame = -2
Query: 209 LKPATTSSPFPLYAYSDADWASDPDDRRSTSGYCLFFRHNLISWSFKK*VLVARSTAEAE 30
L+PA T+SP ++AY DADWASDPDDRRSTSG +F NLISW KK ++VARS+ EAE
Sbjct: 238 LQPAPTNSPLSIHAYCDADWASDPDDRRSTSGAAIFVGPNLISWWSKKQIVVARSSTEAE 297
Query: 29 YRSMALATS 3
YR++ALAT+
Sbjct: 298 YRNLALATA 306
>KYP61326.1 hypothetical protein KK1_015813 [Cajanus cajan]
Length = 195
Score = 91.7 bits (226), Expect = 1e-21
Identities = 44/69 (63%), Positives = 55/69 (79%)
Frame = -2
Query: 209 LKPATTSSPFPLYAYSDADWASDPDDRRSTSGYCLFFRHNLISWSFKK*VLVARSTAEAE 30
L+PA++SS ++AY DADWASDPDDRRSTSG +F NL+SW KK +VARS+ EAE
Sbjct: 87 LQPASSSSSLSIHAYCDADWASDPDDRRSTSGASIFLGPNLVSWWSKKQTVVARSSTEAE 146
Query: 29 YRSMALATS 3
YRS+ALAT+
Sbjct: 147 YRSLALATT 155
>KHN41724.1 Copia protein, partial [Glycine soja]
Length = 260
Score = 92.8 bits (229), Expect = 2e-21
Identities = 46/69 (66%), Positives = 54/69 (78%)
Frame = -2
Query: 209 LKPATTSSPFPLYAYSDADWASDPDDRRSTSGYCLFFRHNLISWSFKK*VLVARSTAEAE 30
L PATTS+P + A+ DADWASD DDRRSTSG C+FF NL+SW KK LVA+S+AEAE
Sbjct: 87 LLPATTSAPLSINAFCDADWASDIDDRRSTSGACIFFGPNLVSWWSKKQTLVAKSSAEAE 146
Query: 29 YRSMALATS 3
YRS+A A S
Sbjct: 147 YRSLAHAAS 155
>KYP46924.1 Copia protein [Cajanus cajan]
Length = 256
Score = 92.0 bits (227), Expect = 3e-21
Identities = 45/69 (65%), Positives = 53/69 (76%)
Frame = -2
Query: 209 LKPATTSSPFPLYAYSDADWASDPDDRRSTSGYCLFFRHNLISWSFKK*VLVARSTAEAE 30
L+PA +SP ++AY DADWASDPDDRRSTSG +F NLISW KK +VARST EAE
Sbjct: 87 LQPAPPNSPLSIHAYCDADWASDPDDRRSTSGAAIFVGPNLISWWSKKQTVVARSTTEAE 146
Query: 29 YRSMALATS 3
Y S+ALAT+
Sbjct: 147 YHSLALATA 155
>KHN36156.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
[Glycine soja]
Length = 1417
Score = 94.7 bits (234), Expect = 4e-21
Identities = 47/69 (68%), Positives = 53/69 (76%)
Frame = -2
Query: 209 LKPATTSSPFPLYAYSDADWASDPDDRRSTSGYCLFFRHNLISWSFKK*VLVARSTAEAE 30
L P+ TS PF L AYSDADWA+D DDRRSTSG C++F NLISW KK LVARS+ EAE
Sbjct: 1256 LTPSPTSPPFSLRAYSDADWATDQDDRRSTSGSCIYFGPNLISWGSKKQQLVARSSTEAE 1315
Query: 29 YRSMALATS 3
YRSMA T+
Sbjct: 1316 YRSMANTTA 1324
>KHN22040.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
[Glycine soja]
Length = 1417
Score = 94.7 bits (234), Expect = 4e-21
Identities = 47/69 (68%), Positives = 53/69 (76%)
Frame = -2
Query: 209 LKPATTSSPFPLYAYSDADWASDPDDRRSTSGYCLFFRHNLISWSFKK*VLVARSTAEAE 30
L P+ TS PF L AYSDADWA+D DDRRSTSG C++F NLISW KK LVARS+ EAE
Sbjct: 1256 LTPSPTSPPFSLRAYSDADWATDQDDRRSTSGSCIYFGPNLISWGSKKQQLVARSSTEAE 1315
Query: 29 YRSMALATS 3
YRSMA T+
Sbjct: 1316 YRSMANTTA 1324
>KYP40911.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan] KYP44175.1 Retrovirus-related Pol
polyprotein from transposon TNT 1-94 [Cajanus cajan]
Length = 255
Score = 91.7 bits (226), Expect = 5e-21
Identities = 44/69 (63%), Positives = 55/69 (79%)
Frame = -2
Query: 209 LKPATTSSPFPLYAYSDADWASDPDDRRSTSGYCLFFRHNLISWSFKK*VLVARSTAEAE 30
L+PA++SS ++AY DADWASDPDDRRSTSG +F NL+SW KK +VARS+ EAE
Sbjct: 87 LQPASSSSSLSIHAYCDADWASDPDDRRSTSGASIFLGPNLVSWWSKKQTVVARSSTEAE 146
Query: 29 YRSMALATS 3
YRS+ALAT+
Sbjct: 147 YRSLALATT 155
>GAU19342.1 hypothetical protein TSUD_336290 [Trifolium subterraneum]
Length = 1442
Score = 94.0 bits (232), Expect = 7e-21
Identities = 45/69 (65%), Positives = 53/69 (76%)
Frame = -2
Query: 209 LKPATTSSPFPLYAYSDADWASDPDDRRSTSGYCLFFRHNLISWSFKK*VLVARSTAEAE 30
+ P+ T PF L AYSDADWA+D DDRRSTSG C++F NL+SWS KK LVARS+ EAE
Sbjct: 1274 ISPSLTGPPFSLRAYSDADWATDQDDRRSTSGSCIYFGPNLVSWSSKKQQLVARSSTEAE 1333
Query: 29 YRSMALATS 3
YRSMA T+
Sbjct: 1334 YRSMANTTA 1342
>KYP44504.1 hypothetical protein KK1_034024 [Cajanus cajan]
Length = 367
Score = 92.4 bits (228), Expect = 1e-20
Identities = 44/69 (63%), Positives = 54/69 (78%)
Frame = -2
Query: 209 LKPATTSSPFPLYAYSDADWASDPDDRRSTSGYCLFFRHNLISWSFKK*VLVARSTAEAE 30
L+PATT+S F ++ Y DADWASDPDDRRSTSG +F NL+SW KK +VARS+ EAE
Sbjct: 199 LQPATTTSSFSIHTYCDADWASDPDDRRSTSGASIFLGPNLVSWWSKKQTVVARSSTEAE 258
Query: 29 YRSMALATS 3
YRS+ALA +
Sbjct: 259 YRSLALAAA 267
>KYP62480.1 Copia protein, partial [Cajanus cajan]
Length = 233
Score = 90.1 bits (222), Expect = 1e-20
Identities = 45/66 (68%), Positives = 52/66 (78%)
Frame = -2
Query: 200 ATTSSPFPLYAYSDADWASDPDDRRSTSGYCLFFRHNLISWSFKK*VLVARSTAEAEYRS 21
A+ ++P L +SD+DWASD D RRSTSG C+FF NLISW KK LVARSTAEAEYRS
Sbjct: 64 ASATAPLSLQGFSDSDWASDVDVRRSTSGACIFFAPNLISWWSKKQTLVARSTAEAEYRS 123
Query: 20 MALATS 3
+ALATS
Sbjct: 124 LALATS 129
>KYP68417.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 394
Score = 92.4 bits (228), Expect = 1e-20
Identities = 44/69 (63%), Positives = 55/69 (79%)
Frame = -2
Query: 209 LKPATTSSPFPLYAYSDADWASDPDDRRSTSGYCLFFRHNLISWSFKK*VLVARSTAEAE 30
L+PA++ S ++AY DADWASDPDDRRSTSG +F NL+SW KK ++VARST EAE
Sbjct: 238 LQPASSPSSLSIHAYCDADWASDPDDRRSTSGASIFLGPNLVSWWSKKQIVVARSTTEAE 297
Query: 29 YRSMALATS 3
YRS+ALAT+
Sbjct: 298 YRSLALATT 306
>KYP50410.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 538
Score = 92.8 bits (229), Expect = 2e-20
Identities = 46/69 (66%), Positives = 55/69 (79%)
Frame = -2
Query: 209 LKPATTSSPFPLYAYSDADWASDPDDRRSTSGYCLFFRHNLISWSFKK*VLVARSTAEAE 30
L+PA ++SP + AY DADWASDPDDRRSTSG +F NLISW KK +VARS+AEAE
Sbjct: 369 LQPAPSNSPLSIRAYCDADWASDPDDRRSTSGASIFVGPNLISWWSKKQTVVARSSAEAE 428
Query: 29 YRSMALATS 3
YRS+ALAT+
Sbjct: 429 YRSLALATA 437
>KYP44325.1 Copia protein [Cajanus cajan]
Length = 256
Score = 90.1 bits (222), Expect = 2e-20
Identities = 43/69 (62%), Positives = 54/69 (78%)
Frame = -2
Query: 209 LKPATTSSPFPLYAYSDADWASDPDDRRSTSGYCLFFRHNLISWSFKK*VLVARSTAEAE 30
L+PA +SP ++AY DADWASDPDDRRSTSG +F NLISW KK +VARS+ EA+
Sbjct: 87 LQPAPPNSPLSIHAYCDADWASDPDDRRSTSGAAIFVGPNLISWWSKKQTVVARSSTEAK 146
Query: 29 YRSMALATS 3
YRS+A+AT+
Sbjct: 147 YRSLAIATA 155
>KHN21230.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
[Glycine soja]
Length = 1429
Score = 92.8 bits (229), Expect = 2e-20
Identities = 46/69 (66%), Positives = 54/69 (78%)
Frame = -2
Query: 209 LKPATTSSPFPLYAYSDADWASDPDDRRSTSGYCLFFRHNLISWSFKK*VLVARSTAEAE 30
L PATTS+P + A+ DADWASD DDRRSTSG C+FF NL+SW KK LVA+S+AEAE
Sbjct: 1260 LLPATTSAPLSINAFCDADWASDIDDRRSTSGACIFFGPNLVSWWSKKQTLVAKSSAEAE 1319
Query: 29 YRSMALATS 3
YRS+A A S
Sbjct: 1320 YRSLAHAAS 1328