BLASTX nr result

ID: Glycyrrhiza35_contig00040837 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza35_contig00040837
         (489 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GAU27958.1 hypothetical protein TSUD_146760 [Trifolium subterran...    57   1e-06
KYP48786.1 Retrovirus-related Pol polyprotein from transposon TN...    56   1e-06
GAU17048.1 hypothetical protein TSUD_105470 [Trifolium subterran...    57   2e-06
KYP37918.1 hypothetical protein KK1_040857, partial [Cajanus cajan]    53   5e-06
GAU15708.1 hypothetical protein TSUD_307180 [Trifolium subterran...    55   8e-06
GAU38852.1 hypothetical protein TSUD_154140 [Trifolium subterran...    55   8e-06

>GAU27958.1 hypothetical protein TSUD_146760 [Trifolium subterraneum]
          Length = 531

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 28/65 (43%), Positives = 40/65 (61%), Gaps = 2/65 (3%)
 Frame = +3

Query: 258 ELLKIKDSSKRMIGSGKLVDGLYRLVHSCSSQNNV--ERFCNSVFTSDSALWHFRLGHVS 431
           +L  I+   ++MIGSG+L+ GLY L  + S  +++   + CNS+    SALWHFR GH S
Sbjct: 466 DLCLIQTKMQKMIGSGRLIHGLYYLQETSSDNSSMCTGKSCNSIVIPKSALWHFRFGHTS 525

Query: 432 HSNRD 446
            S  D
Sbjct: 526 QSRLD 530


>KYP48786.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 194

 Score = 55.8 bits (133), Expect = 1e-06
 Identities = 31/63 (49%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
 Frame = +3

Query: 267 KIKDS-SKRMIGSGKLVDGLYRLVHSCSSQNNVERFCNSVFTSDSALWHFRLGHVSHSNR 443
           +I+DS S RMIG+ KL  GLY +V +  S N V+   N+ FT D  LWH RLGH+SH   
Sbjct: 28  QIQDSHSMRMIGAAKLKSGLYAMVPNDQS-NLVQHCINNFFTYDFDLWHMRLGHLSHEKL 86

Query: 444 DIV 452
           +I+
Sbjct: 87  NII 89


>GAU17048.1 hypothetical protein TSUD_105470 [Trifolium subterraneum]
          Length = 769

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 30/63 (47%), Positives = 41/63 (65%), Gaps = 2/63 (3%)
 Frame = +3

Query: 270 IKDSSKRMIGSGKLVDGLYRLVHSCSSQNNVE--RFCNSVFTSDSALWHFRLGHVSHSNR 443
           I++S +RMIGSG++ +GLY L     SQ N++    CNS+     ALWHFRLGH S +  
Sbjct: 474 IQNSLQRMIGSGRMFNGLYYL-EGTQSQPNIQTGNKCNSIAIPRDALWHFRLGHTSKNRL 532

Query: 444 DIV 452
           DI+
Sbjct: 533 DIL 535


>KYP37918.1 hypothetical protein KK1_040857, partial [Cajanus cajan]
          Length = 126

 Score = 53.1 bits (126), Expect = 5e-06
 Identities = 31/70 (44%), Positives = 42/70 (60%), Gaps = 6/70 (8%)
 Frame = +3

Query: 282 SKRMIGSGKLVDGLYRLVHSC------SSQNNVERFCNSVFTSDSALWHFRLGHVSHSNR 443
           S RMIG  + VDGLY L+ +C      +SQ N     NS + S +ALWHFRLGH+S S  
Sbjct: 48  SVRMIGFAEEVDGLYYLIKTCQKPTTNTSQINTSSTHNSTY-SPNALWHFRLGHISESRL 106

Query: 444 DIV*ALSLFV 473
           +++  L  F+
Sbjct: 107 NMLSELYSFI 116


>GAU15708.1 hypothetical protein TSUD_307180 [Trifolium subterraneum]
          Length = 1433

 Score = 55.1 bits (131), Expect = 8e-06
 Identities = 29/71 (40%), Positives = 43/71 (60%), Gaps = 5/71 (7%)
 Frame = +3

Query: 255 FELLKIKDSSKRMIGSGKLVDGLYRLVHSCSSQNNVER-----FCNSVFTSDSALWHFRL 419
           F +  I +S +RMIGSGKL++GLY L  + +S +++ +      C       SALWHFR 
Sbjct: 446 FNMCTIHNSQQRMIGSGKLLNGLYYLEGTNASTHSLVKPVTGTVCTVFSIPQSALWHFRF 505

Query: 420 GHVSHSNRDIV 452
           GH S+S  +I+
Sbjct: 506 GHASNSRLEIM 516


>GAU38852.1 hypothetical protein TSUD_154140 [Trifolium subterraneum]
          Length = 1494

 Score = 55.1 bits (131), Expect = 8e-06
 Identities = 27/62 (43%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
 Frame = +3

Query: 270 IKDSSKRMIGSGKLVDGLYRLVHSCSSQNNVE-RFCNSVFTSDSALWHFRLGHVSHSNRD 446
           I++S +RMIGSG++++GLY L  + S  N +  + CNS+   ++ALWHFR GH S +  +
Sbjct: 475 IQNSLQRMIGSGRMLNGLYYLEGTHSQPNLLTGKQCNSLAIPNNALWHFRFGHTSQNRLE 534

Query: 447 IV 452
           I+
Sbjct: 535 IL 536


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