BLASTX nr result
ID: Glycyrrhiza35_contig00040784
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza35_contig00040784
(296 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
GAU35685.1 hypothetical protein TSUD_162570 [Trifolium subterran... 67 5e-11
GAU14768.1 hypothetical protein TSUD_204170 [Trifolium subterran... 67 7e-11
GAU22731.1 hypothetical protein TSUD_138560 [Trifolium subterran... 66 1e-10
GAU45929.1 hypothetical protein TSUD_100060 [Trifolium subterran... 62 1e-09
GAU17063.1 hypothetical protein TSUD_105620 [Trifolium subterran... 64 1e-09
KYP78366.1 Putative ribonuclease H protein At1g65750 family [Caj... 64 1e-09
GAU50297.1 hypothetical protein TSUD_288310 [Trifolium subterran... 63 2e-09
GAU51472.1 hypothetical protein TSUD_95870 [Trifolium subterraneum] 63 2e-09
GAU47648.1 hypothetical protein TSUD_27720 [Trifolium subterraneum] 62 3e-09
KYP56001.1 Putative ribonuclease H protein At1g65750 family, par... 62 4e-09
GAU48622.1 hypothetical protein TSUD_133530 [Trifolium subterran... 61 7e-09
GAU11845.1 hypothetical protein TSUD_75960 [Trifolium subterraneum] 60 2e-08
GAU13776.1 hypothetical protein TSUD_82850 [Trifolium subterraneum] 59 5e-08
KYP53392.1 Retrovirus-related Pol polyprotein LINE-1 [Cajanus ca... 58 9e-08
GAU35042.1 hypothetical protein TSUD_30080 [Trifolium subterraneum] 58 9e-08
GAU50029.1 hypothetical protein TSUD_240220 [Trifolium subterran... 58 1e-07
ABE80156.1 Ribonuclease H [Medicago truncatula] 58 1e-07
GAU20604.1 hypothetical protein TSUD_33400 [Trifolium subterraneum] 57 2e-07
KYP35957.1 Putative ribonuclease H protein At1g65750 family, par... 57 2e-07
ABO80459.1 RNA-directed DNA polymerase (Reverse transcriptase); ... 57 3e-07
>GAU35685.1 hypothetical protein TSUD_162570 [Trifolium subterraneum]
Length = 1375
Score = 67.4 bits (163), Expect = 5e-11
Identities = 29/62 (46%), Positives = 39/62 (62%), Gaps = 2/62 (3%)
Frame = +3
Query: 114 VVMDHKVQDRIIWSGNLDGTYSAKEGYKWIIQQKGSSIITRD--WRWIWQLPAPEMIKSL 287
V ++ +V DR W GNL+G Y+AKEGY W+ + S T D W W+W +PAPE IK
Sbjct: 1128 VCLNSQVVDRYTWKGNLNGLYTAKEGYYWLNRFAFSDTDTDDISWNWVWHIPAPEKIKFF 1187
Query: 288 LW 293
+W
Sbjct: 1188 IW 1189
>GAU14768.1 hypothetical protein TSUD_204170 [Trifolium subterraneum]
Length = 503
Score = 67.0 bits (162), Expect = 7e-11
Identities = 25/60 (41%), Positives = 40/60 (66%)
Frame = +3
Query: 114 VVMDHKVQDRIIWSGNLDGTYSAKEGYKWIIQQKGSSIITRDWRWIWQLPAPEMIKSLLW 293
++++ V D W+G+LDG Y+A GY W++++K + + W+WIW L APE IK L+W
Sbjct: 235 LILNIGVLDCFTWNGSLDGVYTASSGYSWLLKKKQHNPNNKSWKWIWNLRAPEKIKFLIW 294
>GAU22731.1 hypothetical protein TSUD_138560 [Trifolium subterraneum]
Length = 385
Score = 66.2 bits (160), Expect = 1e-10
Identities = 27/62 (43%), Positives = 41/62 (66%), Gaps = 2/62 (3%)
Frame = +3
Query: 114 VVMDHKVQDRIIWSGNLDGTYSAKEGYKWIIQQKGSSIITRD--WRWIWQLPAPEMIKSL 287
V ++ +V DR W GNL+G Y+A++GY W+ + K ++ T+D W W+W + APE IK
Sbjct: 169 VCLNPRVADRYTWKGNLNGLYTAQDGYHWLNRVKPTNSSTKDISWSWLWHIEAPEKIKFF 228
Query: 288 LW 293
LW
Sbjct: 229 LW 230
>GAU45929.1 hypothetical protein TSUD_100060 [Trifolium subterraneum]
Length = 188
Score = 62.0 bits (149), Expect = 1e-09
Identities = 27/64 (42%), Positives = 38/64 (59%), Gaps = 4/64 (6%)
Frame = +3
Query: 114 VVMDHKVQDRIIWSGNLDGTYSAKEGYKW----IIQQKGSSIITRDWRWIWQLPAPEMIK 281
V ++ +V DR W GNL+G Y+AK+GY W ++ IT W W+W +PAPE IK
Sbjct: 80 VCLNCQVVDRNTWKGNLNGLYTAKDGYSWHNRSTFTDNATNAIT--WNWVWHIPAPEKIK 137
Query: 282 SLLW 293
+W
Sbjct: 138 FFIW 141
>GAU17063.1 hypothetical protein TSUD_105620 [Trifolium subterraneum]
Length = 440
Score = 63.5 bits (153), Expect = 1e-09
Identities = 26/62 (41%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Frame = +3
Query: 114 VVMDHKVQDRIIWSGNLDGTYSAKEGYKWI--IQQKGSSIITRDWRWIWQLPAPEMIKSL 287
+ ++ V DR W GNL+G Y+A++GY W+ I+ +SI W W+W + APE IK
Sbjct: 80 ICLNPLVADRYTWKGNLNGIYTARDGYHWLNRIESTNNSIEDISWSWLWHIEAPEKIKFF 139
Query: 288 LW 293
LW
Sbjct: 140 LW 141
>KYP78366.1 Putative ribonuclease H protein At1g65750 family [Cajanus cajan]
Length = 1090
Score = 63.5 bits (153), Expect = 1e-09
Identities = 32/95 (33%), Positives = 49/95 (51%), Gaps = 5/95 (5%)
Frame = +3
Query: 27 EMKQKNVINQPNSNAKNRETIANNG-----LKKKVVMDHKVQDRIIWSGNLDGTYSAKEG 191
EM+ ++V N+ N + T + LK+ +++ + D I+W +L G YSAK G
Sbjct: 698 EMRVRDVWNEEGWNLSSLWTSLSKDFNHVLLKQTLLLSEGLHDCIVWKPDLTGNYSAKSG 757
Query: 192 YKWIIQQKGSSIITRDWRWIWQLPAPEMIKSLLWL 296
Y W+ + W WIW++ APE IK LWL
Sbjct: 758 YNWLTFEPEQQPSEDKWLWIWKIYAPENIKFFLWL 792
>GAU50297.1 hypothetical protein TSUD_288310 [Trifolium subterraneum]
Length = 545
Score = 63.2 bits (152), Expect = 2e-09
Identities = 28/62 (45%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Frame = +3
Query: 114 VVMDHKVQDRIIWSGNLDGTYSAKEGYKWIIQQKGSSIITRD--WRWIWQLPAPEMIKSL 287
V ++ +V DR W GNL+G Y+AKEGY W+ + S T D W +W +PAPE IK
Sbjct: 185 VCLNSQVVDRYTWKGNLNGLYTAKEGYYWLNRFSFSDTATDDISWNSVWHIPAPEKIKFF 244
Query: 288 LW 293
+W
Sbjct: 245 IW 246
>GAU51472.1 hypothetical protein TSUD_95870 [Trifolium subterraneum]
Length = 1682
Score = 63.2 bits (152), Expect = 2e-09
Identities = 29/107 (27%), Positives = 55/107 (51%), Gaps = 12/107 (11%)
Frame = +3
Query: 9 ICQSKE-------EMKQKNVINQPNSNAKNRETIANNGLKKKV-----VMDHKVQDRIIW 152
+C+S E +++ K++ + + T G+K + +++ V D W
Sbjct: 1495 LCKSLEYVAIQDSQLRLKDIFFNDSWHVNQLYTPLTTGMKNHISNYHLILNIGVPDCFTW 1554
Query: 153 SGNLDGTYSAKEGYKWIIQQKGSSIITRDWRWIWQLPAPEMIKSLLW 293
+ +LDG Y++ GY W++++K + + W+WIW L APE IK +W
Sbjct: 1555 NDSLDGVYTSSSGYSWLLKKKQYNPNNKSWKWIWNLRAPEKIKFFIW 1601
>GAU47648.1 hypothetical protein TSUD_27720 [Trifolium subterraneum]
Length = 521
Score = 62.4 bits (150), Expect = 3e-09
Identities = 27/61 (44%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Frame = +3
Query: 117 VMDHKVQDRIIWSGNLDGTYSAKEGYKWIIQQKGSSIITR--DWRWIWQLPAPEMIKSLL 290
V D + D IW GNL+G Y+A +GY W+ + S T W W+W +PAPE IK L
Sbjct: 188 VRDVYIDDYFIWKGNLNGLYTAHDGYHWLNRNDFSENPTNVVSWSWLWHIPAPEKIKFFL 247
Query: 291 W 293
W
Sbjct: 248 W 248
>KYP56001.1 Putative ribonuclease H protein At1g65750 family, partial [Cajanus
cajan]
Length = 414
Score = 62.0 bits (149), Expect = 4e-09
Identities = 31/95 (32%), Positives = 47/95 (49%), Gaps = 5/95 (5%)
Frame = +3
Query: 27 EMKQKNVINQPNSNAKNRETIANNGL-----KKKVVMDHKVQDRIIWSGNLDGTYSAKEG 191
EM+ ++V N+ N + T + K+ ++ + D I+W +L G YSAK G
Sbjct: 22 EMRVRDVWNEEGWNLSSLWTSLSEDFNHVLFKQSFLLSEGLHDCIVWQPDLTGNYSAKSG 81
Query: 192 YKWIIQQKGSSIITRDWRWIWQLPAPEMIKSLLWL 296
Y W+ + W WIW++ APE IK LWL
Sbjct: 82 YNWLTFEPEQQPSEDKWLWIWKIHAPENIKFFLWL 116
>GAU48622.1 hypothetical protein TSUD_133530 [Trifolium subterraneum]
Length = 350
Score = 61.2 bits (147), Expect = 7e-09
Identities = 26/61 (42%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Frame = +3
Query: 117 VMDHKVQDRIIWSGNLDGTYSAKEGYKWIIQQKGSSIITR--DWRWIWQLPAPEMIKSLL 290
V D + D W GNL+G Y+A++GY W+ + S T W W+W +PAPE IK L
Sbjct: 54 VRDVYIDDCFTWKGNLNGLYTARDGYHWLNRNDFSENPTNVVSWSWLWHIPAPEKIKFFL 113
Query: 291 W 293
W
Sbjct: 114 W 114
>GAU11845.1 hypothetical protein TSUD_75960 [Trifolium subterraneum]
Length = 386
Score = 59.7 bits (143), Expect = 2e-08
Identities = 24/62 (38%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Frame = +3
Query: 114 VVMDHKVQDRIIWSGNLDGTYSAKEGYKWIIQQKGSSIITR--DWRWIWQLPAPEMIKSL 287
+ ++ + D W GNL G Y+A++GY W+ + S+ T W W+W LPAPE IK
Sbjct: 80 ICLNPSINDCYTWKGNLQGIYTARDGYHWLNRYAFSANPTSVVSWSWLWHLPAPEKIKFF 139
Query: 288 LW 293
+W
Sbjct: 140 IW 141
>GAU13776.1 hypothetical protein TSUD_82850 [Trifolium subterraneum]
Length = 559
Score = 58.9 bits (141), Expect = 5e-08
Identities = 30/96 (31%), Positives = 48/96 (50%), Gaps = 7/96 (7%)
Frame = +3
Query: 27 EMKQKNVINQPNSNAKNRETIANNGLKKK-----VVMDHKVQDRIIWSGNLDGTYSAKEG 191
EM+ ++V N T +K+K + ++ + D W GNL+G Y+ ++G
Sbjct: 327 EMRVRDVYIDGNWQFNQLYTNLPQEIKEKLNSTTISLNPSINDCYTWKGNLNGIYTVRDG 386
Query: 192 YKWIIQQKGSSIITR--DWRWIWQLPAPEMIKSLLW 293
Y W+ + S+ TR W W+W + APE IK LW
Sbjct: 387 YYWLNRNSFSANATRVASWSWLWHVSAPEKIKFFLW 422
>KYP53392.1 Retrovirus-related Pol polyprotein LINE-1 [Cajanus cajan]
Length = 657
Score = 58.2 bits (139), Expect = 9e-08
Identities = 24/60 (40%), Positives = 36/60 (60%)
Frame = +3
Query: 114 VVMDHKVQDRIIWSGNLDGTYSAKEGYKWIIQQKGSSIITRDWRWIWQLPAPEMIKSLLW 293
+ + H + D +W+G L G Y+A EGYKW++ ++ I W WIW+L PE +K LW
Sbjct: 552 MTLHHSLPDVWVWNGALSGRYTAYEGYKWLLARE-DGIHDSVWGWIWRLKIPENLKFFLW 610
>GAU35042.1 hypothetical protein TSUD_30080 [Trifolium subterraneum]
Length = 724
Score = 58.2 bits (139), Expect = 9e-08
Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Frame = +3
Query: 114 VVMDHKVQDRIIWSGNLDGTYSAKEGYKWIIQQKGSSIITR--DWRWIWQLPAPEMIKSL 287
+ ++ + D W GNL G Y+A +GY W+ + S+ T W W+W LPAPE IK
Sbjct: 383 ICLNPSINDCYTWKGNLQGIYTAWDGYHWLNRNAFSANPTSVVSWSWLWHLPAPEKIKFF 442
Query: 288 LW 293
+W
Sbjct: 443 IW 444
>GAU50029.1 hypothetical protein TSUD_240220 [Trifolium subterraneum]
Length = 357
Score = 57.8 bits (138), Expect = 1e-07
Identities = 30/96 (31%), Positives = 48/96 (50%), Gaps = 7/96 (7%)
Frame = +3
Query: 27 EMKQKNVINQPNSNAKNRETIANNGLKKK-----VVMDHKVQDRIIWSGNLDGTYSAKEG 191
EM+ ++V N + T +K+K + ++ V D W GNL+G Y+A++G
Sbjct: 57 EMRVRDVYIDGNWHFNLLNTTLPQEIKEKLKSITICLNPSVNDCYTWKGNLNGIYTARDG 116
Query: 192 YKWIIQQKGSSIIT--RDWRWIWQLPAPEMIKSLLW 293
Y WI + S+ T W W+W + AP+ IK W
Sbjct: 117 YAWINRNSFSANTTSVTSWSWLWNVSAPKKIKFFFW 152
>ABE80156.1 Ribonuclease H [Medicago truncatula]
Length = 438
Score = 57.8 bits (138), Expect = 1e-07
Identities = 25/58 (43%), Positives = 35/58 (60%), Gaps = 3/58 (5%)
Frame = +3
Query: 132 VQDRIIWSGNLDGTYSAKEGYKWII--QQKGSSIITR-DWRWIWQLPAPEMIKSLLWL 296
++D +IWS N +GTYS K G+ W++ + + II W WIW L PE K L+WL
Sbjct: 81 IEDALIWSQNKNGTYSTKSGFHWLLTFRVPATDIIPHPSWSWIWNLQVPEKYKFLIWL 138
>GAU20604.1 hypothetical protein TSUD_33400 [Trifolium subterraneum]
Length = 1174
Score = 57.4 bits (137), Expect = 2e-07
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Frame = +3
Query: 111 KVVMDHKVQDRIIWSGNLDGTYSAKEGYKWIIQQKGS-SIITRDWRWIWQLPAPEMIKSL 287
++ + ++D +W+ N +G Y K GY W++ Q +I W WIWQ+ PE +K L
Sbjct: 812 QLTFNDSLEDVFVWTHNKNGVYITKSGYDWLLAQTDQVTIPLNSWSWIWQIAGPEKLKFL 871
Query: 288 LWL 296
WL
Sbjct: 872 FWL 874
>KYP35957.1 Putative ribonuclease H protein At1g65750 family, partial [Cajanus
cajan]
Length = 307
Score = 57.0 bits (136), Expect = 2e-07
Identities = 20/49 (40%), Positives = 31/49 (63%)
Frame = +3
Query: 147 IWSGNLDGTYSAKEGYKWIIQQKGSSIITRDWRWIWQLPAPEMIKSLLW 293
IWS N GTY+ ++ Y+W++Q + + W+WIWQLP + I+ LW
Sbjct: 142 IWSANTSGTYTVRKAYQWLLQSSLTWSVEGSWKWIWQLPLSKNIQFFLW 190
>ABO80459.1 RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H
[Medicago truncatula]
Length = 869
Score = 56.6 bits (135), Expect = 3e-07
Identities = 23/55 (41%), Positives = 32/55 (58%)
Frame = +3
Query: 132 VQDRIIWSGNLDGTYSAKEGYKWIIQQKGSSIITRDWRWIWQLPAPEMIKSLLWL 296
++D IW N +GTYSAK GY+W++ G+ T W WI + E K L+WL
Sbjct: 515 IEDVFIWPHNKNGTYSAKSGYQWLLSLSGNDNNTHSWSWILKKKISEKYKFLIWL 569