BLASTX nr result

ID: Glycyrrhiza35_contig00039552 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza35_contig00039552
         (344 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_004503341.1 PREDICTED: putative pentatricopeptide repeat-cont...    75   2e-13
XP_003630975.1 PPR containing plant-like protein [Medicago trunc...    68   5e-11
XP_019422754.1 PREDICTED: putative pentatricopeptide repeat-cont...    58   2e-07

>XP_004503341.1 PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330 isoform X1 [Cicer arietinum] XP_012572060.1
           PREDICTED: putative pentatricopeptide repeat-containing
           protein At3g23330 isoform X2 [Cicer arietinum]
          Length = 705

 Score = 74.7 bits (182), Expect = 2e-13
 Identities = 44/93 (47%), Positives = 48/93 (51%), Gaps = 2/93 (2%)
 Frame = -1

Query: 278 TEQVITRILRNPNRRVS--TRQAKQLHGHVVRTKGTSHPDNXXXXXXXXXXXXXXXXXXX 105
           TE +IT ILRNP R VS  TRQAKQLH H+V+TKGT H DN                   
Sbjct: 5   TEHIITNILRNPKRTVSVSTRQAKQLHAHIVKTKGTFHDDNILVLSLYSNLNLLHHSLHL 64

Query: 104 XXXXXXXXXXXXXXXLIKCYTSHNLPHLSLSSF 6
                          LIKCYTSH+L HLS SSF
Sbjct: 65  FNSLPSPPPPLAWSSLIKCYTSHSLLHLSFSSF 97


>XP_003630975.1 PPR containing plant-like protein [Medicago truncatula] AET05451.1
           PPR containing plant-like protein [Medicago truncatula]
          Length = 701

 Score = 68.2 bits (165), Expect = 5e-11
 Identities = 41/95 (43%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
 Frame = -1

Query: 278 TEQVITRILRN-PNRR--VSTRQAKQLHGHVVRTKGTSHPDNXXXXXXXXXXXXXXXXXX 108
           T+  I++ILR  PN+   VSTRQAKQLH H+V+TKGT H DN                  
Sbjct: 5   TQHTISKILRKTPNKTLSVSTRQAKQLHAHIVKTKGTLHSDNILVLSLYSNLNLLQHSLH 64

Query: 107 XXXXXXXXXXXXXXXXLIKCYTSHNLPHLSLSSFN 3
                           +IKCYTSH+L HLS SSFN
Sbjct: 65  LFNSLPSPPPPLAWSSIIKCYTSHSLLHLSFSSFN 99


>XP_019422754.1 PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330 [Lupinus angustifolius]
          Length = 722

 Score = 58.2 bits (139), Expect = 2e-07
 Identities = 33/92 (35%), Positives = 44/92 (47%)
 Frame = -1

Query: 278 TEQVITRILRNPNRRVSTRQAKQLHGHVVRTKGTSHPDNXXXXXXXXXXXXXXXXXXXXX 99
           T+ +I  I++NPN  +ST  AKQLH H+++TKGT HP +                     
Sbjct: 6   TQNLIKTIIKNPNPTISTFHAKQLHAHILKTKGTFHP-HHSSILSLYSSLKLLHDSLLLF 64

Query: 98  XXXXXXXXXXXXXLIKCYTSHNLPHLSLSSFN 3
                        +IKCY SH L H SL+SFN
Sbjct: 65  NTLHSPPPLAWISIIKCYISHGLLHSSLASFN 96


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