BLASTX nr result
ID: Glycyrrhiza35_contig00039031
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza35_contig00039031
(302 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AFP55578.1 copia-type polyprotein [Rosa rugosa] 132 1e-33
KHN13189.1 Retrovirus-related Pol polyprotein from transposon TN... 120 9e-31
KHN41486.1 Retrovirus-related Pol polyprotein from transposon TN... 120 1e-30
KHN48836.1 Retrovirus-related Pol polyprotein from transposon TN... 120 1e-30
KHN44034.1 Retrovirus-related Pol polyprotein from transposon TN... 120 1e-30
KHN31954.1 Retrovirus-related Pol polyprotein from transposon TN... 120 1e-30
KHN14051.1 Retrovirus-related Pol polyprotein from transposon TN... 120 1e-30
KHN40953.1 Retrovirus-related Pol polyprotein from transposon TN... 120 1e-30
KHN36591.1 Retrovirus-related Pol polyprotein from transposon TN... 120 3e-30
KHN22605.1 Retrovirus-related Pol polyprotein from transposon TN... 117 7e-30
CAN74984.1 hypothetical protein VITISV_035210 [Vitis vinifera] 119 3e-29
CAN76698.1 hypothetical protein VITISV_011792 [Vitis vinifera] 116 3e-28
KHN39047.1 Retrovirus-related Pol polyprotein from transposon TN... 113 3e-28
KHN02838.1 Retrovirus-related Pol polyprotein from transposon TN... 113 3e-28
KYP57479.1 Retrovirus-related Pol polyprotein from transposon TN... 111 9e-28
GAU26746.1 hypothetical protein TSUD_317440 [Trifolium subterran... 113 3e-27
CAN76379.1 hypothetical protein VITISV_017862 [Vitis vinifera] 109 7e-26
JAU09149.1 Retrovirus-related Pol polyprotein from transposon TN... 101 1e-25
JAU68242.1 Retrovirus-related Pol polyprotein from transposon TN... 106 1e-25
CAN68842.1 hypothetical protein VITISV_023226 [Vitis vinifera] 108 1e-25
>AFP55578.1 copia-type polyprotein [Rosa rugosa]
Length = 1187
Score = 132 bits (331), Expect = 1e-33
Identities = 58/96 (60%), Positives = 72/96 (75%)
Frame = +1
Query: 1 RQSSNKATVECFKCHKLGHFKYECPTWKESANYVXXXXXXXXXXXXXMSFVEVNNSKQEE 180
RQ NKA VEC+KCHKLGHF+YECP W+ +ANY M++VE+NNSK+E+
Sbjct: 213 RQGFNKALVECYKCHKLGHFQYECPNWERTANYAELEEEEELLL---MAYVEINNSKRED 269
Query: 181 MWFLDSGCSNYMCGNRQWFSCIDEAFRHSVKH*NLT 288
+WFLDSGCSN+MCGNR+WFS +DE F+HSVK N T
Sbjct: 270 VWFLDSGCSNHMCGNRKWFSNLDETFKHSVKLGNNT 305
>KHN13189.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Glycine soja]
Length = 342
Score = 120 bits (300), Expect = 9e-31
Identities = 54/96 (56%), Positives = 69/96 (71%)
Frame = +1
Query: 1 RQSSNKATVECFKCHKLGHFKYECPTWKESANYVXXXXXXXXXXXXXMSFVEVNNSKQEE 180
RQS NKA +ECFKCHKLGH++YECP W+++ANYV MS+VE+ K EE
Sbjct: 238 RQSFNKAVIECFKCHKLGHYQYECPDWEKNANYVELEKEKDEELLL-MSYVELEQDKMEE 296
Query: 181 MWFLDSGCSNYMCGNRQWFSCIDEAFRHSVKH*NLT 288
+WFLDSGCSN+M GN++WFS +DE+F +VK N T
Sbjct: 297 VWFLDSGCSNHMTGNKEWFSELDESFSQTVKLGNNT 332
>KHN41486.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Glycine soja]
Length = 349
Score = 120 bits (300), Expect = 1e-30
Identities = 54/96 (56%), Positives = 69/96 (71%)
Frame = +1
Query: 1 RQSSNKATVECFKCHKLGHFKYECPTWKESANYVXXXXXXXXXXXXXMSFVEVNNSKQEE 180
RQS NKA +ECFKCHKLGH++YECP W+++ANYV MS+VE+ K EE
Sbjct: 243 RQSFNKAVIECFKCHKLGHYQYECPDWEKNANYVELEKEKDEELLL-MSYVELEQDKMEE 301
Query: 181 MWFLDSGCSNYMCGNRQWFSCIDEAFRHSVKH*NLT 288
+WFLDSGCSN+M GN++WFS +DE+F +VK N T
Sbjct: 302 VWFLDSGCSNHMTGNKEWFSELDESFSQTVKLGNNT 337
>KHN48836.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Glycine soja]
Length = 351
Score = 120 bits (300), Expect = 1e-30
Identities = 54/96 (56%), Positives = 69/96 (71%)
Frame = +1
Query: 1 RQSSNKATVECFKCHKLGHFKYECPTWKESANYVXXXXXXXXXXXXXMSFVEVNNSKQEE 180
RQS NKA +ECFKCHKLGH++YECP W+++ANYV MS+VE+ K EE
Sbjct: 243 RQSFNKAVIECFKCHKLGHYQYECPDWEKNANYVELEKEKDEELLL-MSYVELEQDKMEE 301
Query: 181 MWFLDSGCSNYMCGNRQWFSCIDEAFRHSVKH*NLT 288
+WFLDSGCSN+M GN++WFS +DE+F +VK N T
Sbjct: 302 VWFLDSGCSNHMTGNKEWFSELDESFSQTVKLGNNT 337
>KHN44034.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Glycine soja]
Length = 351
Score = 120 bits (300), Expect = 1e-30
Identities = 54/96 (56%), Positives = 69/96 (71%)
Frame = +1
Query: 1 RQSSNKATVECFKCHKLGHFKYECPTWKESANYVXXXXXXXXXXXXXMSFVEVNNSKQEE 180
RQS NKA +ECFKCHKLGH++YECP W+++ANYV MS+VE+ K EE
Sbjct: 243 RQSFNKAVIECFKCHKLGHYQYECPDWEKNANYVELEKEKDEELLL-MSYVELEQDKMEE 301
Query: 181 MWFLDSGCSNYMCGNRQWFSCIDEAFRHSVKH*NLT 288
+WFLDSGCSN+M GN++WFS +DE+F +VK N T
Sbjct: 302 VWFLDSGCSNHMTGNKEWFSELDESFSQTVKLGNNT 337
>KHN31954.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Glycine soja]
Length = 351
Score = 120 bits (300), Expect = 1e-30
Identities = 54/96 (56%), Positives = 69/96 (71%)
Frame = +1
Query: 1 RQSSNKATVECFKCHKLGHFKYECPTWKESANYVXXXXXXXXXXXXXMSFVEVNNSKQEE 180
RQS NKA +ECFKCHKLGH++YECP W+++ANYV MS+VE+ K EE
Sbjct: 243 RQSFNKAVIECFKCHKLGHYQYECPDWEKNANYVELEKEKDEELLL-MSYVELEQDKMEE 301
Query: 181 MWFLDSGCSNYMCGNRQWFSCIDEAFRHSVKH*NLT 288
+WFLDSGCSN+M GN++WFS +DE+F +VK N T
Sbjct: 302 VWFLDSGCSNHMTGNKEWFSELDESFSQTVKLGNNT 337
>KHN14051.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Glycine soja]
Length = 351
Score = 120 bits (300), Expect = 1e-30
Identities = 54/96 (56%), Positives = 69/96 (71%)
Frame = +1
Query: 1 RQSSNKATVECFKCHKLGHFKYECPTWKESANYVXXXXXXXXXXXXXMSFVEVNNSKQEE 180
RQS NKA +ECFKCHKLGH++YECP W+++ANYV MS+VE+ K EE
Sbjct: 243 RQSFNKAVIECFKCHKLGHYQYECPDWEKNANYVELEKEKDEELLL-MSYVELEQDKMEE 301
Query: 181 MWFLDSGCSNYMCGNRQWFSCIDEAFRHSVKH*NLT 288
+WFLDSGCSN+M GN++WFS +DE+F +VK N T
Sbjct: 302 VWFLDSGCSNHMTGNKEWFSELDESFSQTVKLGNNT 337
>KHN40953.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Glycine soja]
Length = 354
Score = 120 bits (300), Expect = 1e-30
Identities = 54/96 (56%), Positives = 69/96 (71%)
Frame = +1
Query: 1 RQSSNKATVECFKCHKLGHFKYECPTWKESANYVXXXXXXXXXXXXXMSFVEVNNSKQEE 180
RQS NKA +ECFKCHKLGH++YECP W+++ANYV MS+VE+ K EE
Sbjct: 246 RQSFNKAVIECFKCHKLGHYQYECPDWEKNANYVELEKEKDEELLL-MSYVELEQDKMEE 304
Query: 181 MWFLDSGCSNYMCGNRQWFSCIDEAFRHSVKH*NLT 288
+WFLDSGCSN+M GN++WFS +DE+F +VK N T
Sbjct: 305 VWFLDSGCSNHMTGNKEWFSELDESFSQTVKLGNNT 340
>KHN36591.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Glycine soja]
Length = 430
Score = 120 bits (300), Expect = 3e-30
Identities = 54/96 (56%), Positives = 69/96 (71%)
Frame = +1
Query: 1 RQSSNKATVECFKCHKLGHFKYECPTWKESANYVXXXXXXXXXXXXXMSFVEVNNSKQEE 180
RQS NKA +ECFKCHKLGH++YECP W+++ANYV MS+VE+ K EE
Sbjct: 230 RQSFNKAVIECFKCHKLGHYQYECPDWEKNANYVELEKEKDEELLL-MSYVELEQDKMEE 288
Query: 181 MWFLDSGCSNYMCGNRQWFSCIDEAFRHSVKH*NLT 288
+WFLDSGCSN+M GN++WFS +DE+F +VK N T
Sbjct: 289 VWFLDSGCSNHMTGNKEWFSELDESFSQTVKLGNNT 324
>KHN22605.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Glycine soja]
Length = 342
Score = 117 bits (294), Expect = 7e-30
Identities = 53/96 (55%), Positives = 68/96 (70%)
Frame = +1
Query: 1 RQSSNKATVECFKCHKLGHFKYECPTWKESANYVXXXXXXXXXXXXXMSFVEVNNSKQEE 180
RQ NKA +ECFKCHKLGH++YECP W+++ANYV MS+VE+ K EE
Sbjct: 238 RQLFNKAVIECFKCHKLGHYQYECPDWEKNANYVELEKEKDEELLL-MSYVELEQDKMEE 296
Query: 181 MWFLDSGCSNYMCGNRQWFSCIDEAFRHSVKH*NLT 288
+WFLDSGCSN+M GN++WFS +DE+F +VK N T
Sbjct: 297 VWFLDSGCSNHMTGNKEWFSELDESFSQTVKLGNNT 332
>CAN74984.1 hypothetical protein VITISV_035210 [Vitis vinifera]
Length = 2408
Score = 119 bits (298), Expect = 3e-29
Identities = 51/91 (56%), Positives = 67/91 (73%)
Frame = +1
Query: 1 RQSSNKATVECFKCHKLGHFKYECPTWKESANYVXXXXXXXXXXXXXMSFVEVNNSKQEE 180
RQ+ NKA VEC+KCH+LGHF+YECP W++ ANY MS+VE+N S++E+
Sbjct: 179 RQTFNKAIVECYKCHQLGHFQYECPKWEKEANYAELEEKEEMLL---MSYVELNQSRRED 235
Query: 181 MWFLDSGCSNYMCGNRQWFSCIDEAFRHSVK 273
+WFLDSGCSN+MC N++WF +DE FR SVK
Sbjct: 236 VWFLDSGCSNHMCANKEWFLDLDEEFRQSVK 266
>CAN76698.1 hypothetical protein VITISV_011792 [Vitis vinifera]
Length = 1084
Score = 116 bits (291), Expect = 3e-28
Identities = 51/90 (56%), Positives = 67/90 (74%)
Frame = +1
Query: 1 RQSSNKATVECFKCHKLGHFKYECPTWKESANYVXXXXXXXXXXXXXMSFVEVNNSKQEE 180
RQ+ NKA VEC+KCH+LGHF+YECP W++ A+Y MS+VE+N S++E+
Sbjct: 197 RQAFNKAIVECYKCHQLGHFQYECPKWEKGAHYAELBEKEXMLL---MSYVELNQSRKED 253
Query: 181 MWFLDSGCSNYMCGNRQWFSCIDEAFRHSV 270
+WFLDSGC N+MCGN+ WFS +DE FR SV
Sbjct: 254 VWFLDSGCXNHMCGNKLWFSDLDEEFRQSV 283
>KHN39047.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Glycine soja]
Length = 342
Score = 113 bits (283), Expect = 3e-28
Identities = 50/96 (52%), Positives = 67/96 (69%)
Frame = +1
Query: 1 RQSSNKATVECFKCHKLGHFKYECPTWKESANYVXXXXXXXXXXXXXMSFVEVNNSKQEE 180
+ S +A +ECFKCHKLGH++YECP W+++ANYV MS+VE+ K EE
Sbjct: 201 KASRGRAVIECFKCHKLGHYQYECPDWEKNANYVELEKEKDEELLL-MSYVELEQDKMEE 259
Query: 181 MWFLDSGCSNYMCGNRQWFSCIDEAFRHSVKH*NLT 288
+WFLDSGCSN+M GN++WFS +DE+F +VK N T
Sbjct: 260 VWFLDSGCSNHMTGNKEWFSELDESFSQTVKLGNNT 295
>KHN02838.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Glycine soja]
Length = 342
Score = 113 bits (283), Expect = 3e-28
Identities = 50/96 (52%), Positives = 67/96 (69%)
Frame = +1
Query: 1 RQSSNKATVECFKCHKLGHFKYECPTWKESANYVXXXXXXXXXXXXXMSFVEVNNSKQEE 180
+ S +A +ECFKCHKLGH++YECP W+++ANYV MS+VE+ K EE
Sbjct: 201 KASRGRAVIECFKCHKLGHYQYECPDWEKNANYVELEKEKDEELLL-MSYVELEQDKMEE 259
Query: 181 MWFLDSGCSNYMCGNRQWFSCIDEAFRHSVKH*NLT 288
+WFLDSGCSN+M GN++WFS +DE+F +VK N T
Sbjct: 260 VWFLDSGCSNHMTGNKEWFSELDESFSQTVKLGNNT 295
>KYP57479.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 294
Score = 111 bits (277), Expect = 9e-28
Identities = 54/98 (55%), Positives = 68/98 (69%), Gaps = 2/98 (2%)
Frame = +1
Query: 1 RQSSNKATVECFKCHKLGHFKYECPTWKESANYVXXXXXXXXXXXXXMSFVEV--NNSKQ 174
RQ+ N+ TVEC+KCHKLGH++ ECP W + ANY MS+V++ N+S+Q
Sbjct: 160 RQNINRVTVECYKCHKLGHYQNECPLWDKEANYAEFDEEEEILL---MSYVDLPQNHSEQ 216
Query: 175 EEMWFLDSGCSNYMCGNRQWFSCIDEAFRHSVKH*NLT 288
EE WFLDSGCSN+MCG+R FS +DE FRHSVK N T
Sbjct: 217 EEAWFLDSGCSNHMCGDRSKFSEMDEIFRHSVKLGNNT 254
>GAU26746.1 hypothetical protein TSUD_317440 [Trifolium subterraneum]
Length = 1608
Score = 113 bits (283), Expect = 3e-27
Identities = 52/98 (53%), Positives = 66/98 (67%)
Frame = +1
Query: 1 RQSSNKATVECFKCHKLGHFKYECPTWKESANYVXXXXXXXXXXXXXMSFVEVNNSKQEE 180
RQS N+AT+ECFKCHKLGHF+YECP W+ ANY M++ E+ QEE
Sbjct: 241 RQSLNRATIECFKCHKLGHFQYECPDWENKANYA---ELEEEEELLLMAYEELRQPSQEE 297
Query: 181 MWFLDSGCSNYMCGNRQWFSCIDEAFRHSVKH*NLTTI 294
WFLDSGCSN+M GN++WFS ++E F +VK N TT+
Sbjct: 298 AWFLDSGCSNHMTGNKKWFSEMEEGFCRTVKLGNDTTM 335
>CAN76379.1 hypothetical protein VITISV_017862 [Vitis vinifera]
Length = 639
Score = 109 bits (273), Expect = 7e-26
Identities = 48/91 (52%), Positives = 64/91 (70%)
Frame = +1
Query: 1 RQSSNKATVECFKCHKLGHFKYECPTWKESANYVXXXXXXXXXXXXXMSFVEVNNSKQEE 180
RQS NK TV+C+KCHKLGHF+YECP+W + AN+ MS+VE+N +K+E+
Sbjct: 299 RQSFNKDTVKCYKCHKLGHFQYECPSWDKEANF---SELGEEEVMLLMSYVEINEAKKED 355
Query: 181 MWFLDSGCSNYMCGNRQWFSCIDEAFRHSVK 273
+WFLDSGCSN+MCG++ F +E FR VK
Sbjct: 356 VWFLDSGCSNHMCGDKTLFCDFNECFRQMVK 386
>JAU09149.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Noccaea caerulescens]
Length = 129
Score = 101 bits (252), Expect = 1e-25
Identities = 43/90 (47%), Positives = 61/90 (67%)
Frame = +1
Query: 4 QSSNKATVECFKCHKLGHFKYECPTWKESANYVXXXXXXXXXXXXXMSFVEVNNSKQEEM 183
+S NKAT+EC+ CHKLGHF YECP + ANY M++VE+ +K+ ++
Sbjct: 25 RSFNKATIECYSCHKLGHFAYECPNEAKGANYAELEEKEEVLL---MAYVELQGAKRSDV 81
Query: 184 WFLDSGCSNYMCGNRQWFSCIDEAFRHSVK 273
WF+DSGCSN+MCG R+ F+ +D +F H+VK
Sbjct: 82 WFVDSGCSNHMCGERRMFTSLDTSFTHNVK 111
>JAU68242.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Noccaea caerulescens]
Length = 311
Score = 106 bits (264), Expect = 1e-25
Identities = 46/91 (50%), Positives = 62/91 (68%)
Frame = +1
Query: 1 RQSSNKATVECFKCHKLGHFKYECPTWKESANYVXXXXXXXXXXXXXMSFVEVNNSKQEE 180
R SN+AT+ECF+CHKLGH++ ECPTW ANY M+FVE +SK++
Sbjct: 34 RGRSNRATIECFRCHKLGHYQSECPTWDSKANYAELDEKEELLL---MAFVEEESSKRDL 90
Query: 181 MWFLDSGCSNYMCGNRQWFSCIDEAFRHSVK 273
+WFLDSGCSN+M G+R WF+ +DE H+V+
Sbjct: 91 VWFLDSGCSNHMTGDRSWFTDLDEKIMHTVR 121
>CAN68842.1 hypothetical protein VITISV_023226 [Vitis vinifera]
Length = 1146
Score = 108 bits (271), Expect = 1e-25
Identities = 47/90 (52%), Positives = 65/90 (72%)
Frame = +1
Query: 4 QSSNKATVECFKCHKLGHFKYECPTWKESANYVXXXXXXXXXXXXXMSFVEVNNSKQEEM 183
Q+ +KA V+C+KCH+LGHF+YECP W++ AN V MS+VE+N S++E++
Sbjct: 478 QTFSKAIVKCYKCHQLGHFQYECPKWEKEANNVELEEKEEMLL---MSYVELNQSRREDV 534
Query: 184 WFLDSGCSNYMCGNRQWFSCIDEAFRHSVK 273
WFLDS CSN+ C N++WFS +DE FR SVK
Sbjct: 535 WFLDSRCSNHTCANKEWFSGLDEEFRQSVK 564