BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza35_contig00037634
         (777 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GAU46782.1 hypothetical protein TSUD_351810 [Trifolium subterran...   331   e-101
GAU47513.1 hypothetical protein TSUD_138850 [Trifolium subterran...   326   3e-99
AJY78067.1 putative polyprotein [Glycine max]                         316   1e-98
KHN05285.1 Retrovirus-related Pol polyprotein from transposon TN...   318   6e-97
GAU31769.1 hypothetical protein TSUD_22150 [Trifolium subterraneum]   310   1e-93
KYP36109.1 Retrovirus-related Pol polyprotein from transposon TN...   303   5e-92
KYP70579.1 Retrovirus-related Pol polyprotein from transposon TN...   281   9e-92
KYP62795.1 Retrovirus-related Pol polyprotein from transposon TN...   271   1e-87
ABD32334.2 Polynucleotidyl transferase, Ribonuclease H fold [Med...   284   2e-87
KYP68194.1 Retrovirus-related Pol polyprotein from transposon TN...   279   2e-84
GAU15708.1 hypothetical protein TSUD_307180 [Trifolium subterran...   278   2e-82
KYP44664.1 Retrovirus-related Pol polyprotein from transposon TN...   256   7e-82
XP_016690731.1 PREDICTED: uncharacterized protein LOC107907947 [...   266   3e-81
KHN01991.1 Retrovirus-related Pol polyprotein from transposon TN...   271   6e-80
KYP61041.1 Retrovirus-related Pol polyprotein from transposon TN...   264   1e-79
KYP47160.1 Retrovirus-related Pol polyprotein from transposon TN...   250   1e-79
KYP64985.1 Retrovirus-related Pol polyprotein from transposon TN...   270   1e-79
GAU36337.1 hypothetical protein TSUD_321760 [Trifolium subterran...   268   2e-79
KYP34293.1 Retrovirus-related Pol polyprotein from transposon TN...   270   3e-79
KYP72197.1 Retrovirus-related Pol polyprotein from transposon TN...   253   3e-79

>GAU46782.1 hypothetical protein TSUD_351810 [Trifolium subterraneum]
          Length = 1512

 Score =  331 bits (848), Expect = e-101
 Identities = 161/263 (61%), Positives = 201/263 (76%), Gaps = 4/263 (1%)
 Frame = +1

Query: 1    IGLANQCEGLYSLVVDAK----NAFVSSTARGSDSIPAEALWHFRLGHMSNKRLNLVHSQ 168
            IG     EGLY L    +    N+ +S     +  IP +ALWHFRLGH+S+ RL L+ S 
Sbjct: 497  IGSGELIEGLYYLTNKPQPVSANSSISINPSSNIHIPKQALWHFRLGHLSHARLLLMQSS 556

Query: 169  FSFVYVDHNSVCDVCHYARHKKLPYFLTLSKATKPYELIHFDIWGPISTSSVHGHKYFLT 348
            F FV +D ++VCD+CH ARHKKL Y L+++KA+   ELIHFDIWGP S  S+HGH+YFLT
Sbjct: 557  FPFVTIDEHAVCDICHLARHKKLTYKLSVNKASHCGELIHFDIWGPTSIHSIHGHRYFLT 616

Query: 349  VLDDYSRFTWIILLKSKAKVQLHVQDFVTMVEKEYDAKIKIICTDNGPEFLLPQFYKSKG 528
             +DD+SRFTW+ILLKSKA+V   V  F+TM+EK+++  ++ I TDNGPEFL+P+FY SKG
Sbjct: 617  AIDDFSRFTWVILLKSKAEVSSLVIQFITMIEKQFNTIVRTIRTDNGPEFLIPEFYASKG 676

Query: 529  IVHQTSCVESPQQNGRVERKLQHILNVGRALLFQSKRPKIF*SYAVLYATYIVNRVPSPL 708
            I HQTSCVE+PQQNGRVERK QH+LNVGR+LLFQSK PK F SYAV +ATYI+NRV +PL
Sbjct: 677  INHQTSCVETPQQNGRVERKHQHLLNVGRSLLFQSKLPKKFWSYAVSHATYIINRVCTPL 736

Query: 709  LQNKCPYTLLYGQTPDLNQIRVF 777
            LQNK PY LLY + PDL Q++VF
Sbjct: 737  LQNKSPYHLLYNKPPDLEQLKVF 759


>GAU47513.1 hypothetical protein TSUD_138850 [Trifolium subterraneum]
          Length = 1469

 Score =  326 bits (835), Expect = 3e-99
 Identities = 151/260 (58%), Positives = 200/260 (76%), Gaps = 1/260 (0%)
 Frame = +1

Query: 1    IGLANQCEGLYSLVVDAKNAFVSST-ARGSDSIPAEALWHFRLGHMSNKRLNLVHSQFSF 177
            IG A+  EGLY L + +K     S       +IP +ALWHFRLGH SN +++L+ S F F
Sbjct: 463  IGFADLIEGLYYLTLTSKEVHAHSIDGTQHTNIPDQALWHFRLGHTSNTKMSLLQSVFPF 522

Query: 178  VYVDHNSVCDVCHYARHKKLPYFLTLSKATKPYELIHFDIWGPISTSSVHGHKYFLTVLD 357
            + VD+  VCD+CH A+HKKL Y ++++KAT PYELIHFDIWGPI++ S+H H YFLT +D
Sbjct: 523  ITVDNKGVCDICHLAKHKKLYYKVSMNKATVPYELIHFDIWGPIASKSIHNHAYFLTAVD 582

Query: 358  DYSRFTWIILLKSKAKVQLHVQDFVTMVEKEYDAKIKIICTDNGPEFLLPQFYKSKGIVH 537
            DYSRFTW+ L+K K++ + HV +F+ ++E ++++K+KI+ T NG EFL+PQFY SKGIVH
Sbjct: 583  DYSRFTWVTLMKHKSEARQHVINFIKLIETQHNSKVKIVRTYNGVEFLMPQFYASKGIVH 642

Query: 538  QTSCVESPQQNGRVERKLQHILNVGRALLFQSKRPKIF*SYAVLYATYIVNRVPSPLLQN 717
            QTSCVE+P+QNGRVERK QH+LNVGRALLFQ+  PK+F SYAV +ATYI+NRVPS +L N
Sbjct: 643  QTSCVETPEQNGRVERKHQHLLNVGRALLFQAHLPKMFWSYAVQHATYIINRVPSVVLSN 702

Query: 718  KCPYTLLYGQTPDLNQIRVF 777
            K PY LL+   PD+  ++VF
Sbjct: 703  KSPYELLHNVLPDIKDLKVF 722


>AJY78067.1 putative polyprotein [Glycine max]
          Length = 886

 Score =  316 bits (810), Expect = 1e-98
 Identities = 151/266 (56%), Positives = 196/266 (73%), Gaps = 7/266 (2%)
 Frame = +1

Query: 1    IGLANQCEGLYSLVVDAK-----NAFVSSTARGSDS--IPAEALWHFRLGHMSNKRLNLV 159
            IGL    +GLY L    K     N  +SS    +++  IP  A+WHFRLGH+S+ R+ L+
Sbjct: 488  IGLGESRDGLYYLTQTNKECASSNYNISSIFSSANNVHIPENAIWHFRLGHLSSSRIALL 547

Query: 160  HSQFSFVYVDHNSVCDVCHYARHKKLPYFLTLSKATKPYELIHFDIWGPISTSSVHGHKY 339
            HSQF F+  D +SVCD+CH+A+H+KLP+  +  KA K ++LIHFDIWGPIS  SVH H Y
Sbjct: 548  HSQFPFIVNDSSSVCDICHFAKHRKLPFVHSYHKAIKCFDLIHFDIWGPISIKSVHNHAY 607

Query: 340  FLTVLDDYSRFTWIILLKSKAKVQLHVQDFVTMVEKEYDAKIKIICTDNGPEFLLPQFYK 519
            FLT +DD+SR+TWI L+K+K++ +LHVQ+F+  ++ +Y+  +K I TDNGPEFL+P FY 
Sbjct: 608  FLTAVDDHSRYTWITLMKNKSEARLHVQNFIHFIKTQYNHSVKSIRTDNGPEFLMPDFYA 667

Query: 520  SKGIVHQTSCVESPQQNGRVERKLQHILNVGRALLFQSKRPKIF*SYAVLYATYIVNRVP 699
            SKGI+HQT CV+SPQQNGRVERK Q ILN+GRALL QS  PK F  YAV +A YI+NRVP
Sbjct: 668  SKGILHQTLCVDSPQQNGRVERKHQQILNIGRALLVQSNLPKSFWCYAVSHAVYIMNRVP 727

Query: 700  SPLLQNKCPYTLLYGQTPDLNQIRVF 777
            +P LQNK PYTLLY   PD + ++VF
Sbjct: 728  APNLQNKSPYTLLYNTAPDFDTLKVF 753


>KHN05285.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Glycine soja]
          Length = 1346

 Score =  318 bits (816), Expect = 6e-97
 Identities = 152/266 (57%), Positives = 197/266 (74%), Gaps = 7/266 (2%)
 Frame = +1

Query: 1    IGLANQCEGLYSLVVDAK-----NAFVSSTARGSDS--IPAEALWHFRLGHMSNKRLNLV 159
            IGL    +GLY L    K     N  +SS    +++  IP  A+WHFRLGH+S+ R+ L+
Sbjct: 392  IGLGESRDGLYYLTQTNKECASSNYNISSIFSSANNVHIPENAIWHFRLGHLSSSRIALL 451

Query: 160  HSQFSFVYVDHNSVCDVCHYARHKKLPYFLTLSKATKPYELIHFDIWGPISTSSVHGHKY 339
            HSQF F+  D +SVCD+CH+A+H+KLP+  +  KA K ++LIHFDIWGPIS  SVH H Y
Sbjct: 452  HSQFPFIVNDSSSVCDICHFAKHRKLPFVHSYHKAIKCFDLIHFDIWGPISIKSVHNHAY 511

Query: 340  FLTVLDDYSRFTWIILLKSKAKVQLHVQDFVTMVEKEYDAKIKIICTDNGPEFLLPQFYK 519
            FLT +DD+SR+TWI L+K+K++ +LHVQ+F+  ++ +Y+  +K I TDNGPEFL+P FY 
Sbjct: 512  FLTAVDDHSRYTWITLMKNKSEARLHVQNFIHFIKTQYNHSVKSIRTDNGPEFLMPDFYA 571

Query: 520  SKGIVHQTSCVESPQQNGRVERKLQHILNVGRALLFQSKRPKIF*SYAVLYATYIVNRVP 699
            SKGI+HQTSCV+SPQQNGRVERK Q ILN+GRALL QS  PK F  YAV +A YI+NRVP
Sbjct: 572  SKGILHQTSCVDSPQQNGRVERKHQQILNIGRALLVQSNLPKSFWCYAVSHAVYIMNRVP 631

Query: 700  SPLLQNKCPYTLLYGQTPDLNQIRVF 777
            +P LQNK PYTLLY   PD + ++VF
Sbjct: 632  APNLQNKSPYTLLYNTAPDFDTLKVF 657


>GAU31769.1 hypothetical protein TSUD_22150 [Trifolium subterraneum]
          Length = 1372

 Score =  310 bits (793), Expect = 1e-93
 Identities = 144/260 (55%), Positives = 195/260 (75%), Gaps = 1/260 (0%)
 Frame = +1

Query: 1    IGLANQCEGLYSLVVDAKNAFVSST-ARGSDSIPAEALWHFRLGHMSNKRLNLVHSQFSF 177
            IG A+  EGLY L + ++     +       +IP +ALW FRLGH SN +++L+ S F F
Sbjct: 422  IGSADLIEGLYYLTLTSEEVHAHNIDGTQHTNIPDQALWLFRLGHTSNTKMSLLQSVFPF 481

Query: 178  VYVDHNSVCDVCHYARHKKLPYFLTLSKATKPYELIHFDIWGPISTSSVHGHKYFLTVLD 357
            + VD+  VCD+CH A+HKKL Y ++++KA  PYELIHFDIWGPI++ S+H H YFLTV+D
Sbjct: 482  IAVDNKGVCDICHLAKHKKLYYKVSMNKAYVPYELIHFDIWGPIASKSIHNHAYFLTVVD 541

Query: 358  DYSRFTWIILLKSKAKVQLHVQDFVTMVEKEYDAKIKIICTDNGPEFLLPQFYKSKGIVH 537
            DYSRFTW+ L+K K + + HV +F+ ++E ++++K+KI+ TDNG EFL+ QFY SKGI+H
Sbjct: 542  DYSRFTWVTLMKHKTEARQHVINFIKLIETQHNSKVKIVRTDNGVEFLITQFYASKGIIH 601

Query: 538  QTSCVESPQQNGRVERKLQHILNVGRALLFQSKRPKIF*SYAVLYATYIVNRVPSPLLQN 717
            QTSCVE+P+QNGRVERK QH+LNVGRALLFQ+  PK F SY V +ATYI+NRVP  +L N
Sbjct: 602  QTSCVETPEQNGRVERKHQHLLNVGRALLFQAHLPKFFWSYDVQHATYIINRVPFVVLSN 661

Query: 718  KCPYTLLYGQTPDLNQIRVF 777
            K PY LL+   P++  ++VF
Sbjct: 662  KSPYELLHNVLPNIKDLKVF 681


>KYP36109.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 1115

 Score =  303 bits (775), Expect = 5e-92
 Identities = 140/259 (54%), Positives = 192/259 (74%)
 Frame = +1

Query: 1   IGLANQCEGLYSLVVDAKNAFVSSTARGSDSIPAEALWHFRLGHMSNKRLNLVHSQFSFV 180
           IG AN  EGL+ L +  +    ++ A  +  I    LWHFRLGH+S+ RLN+++ QF F+
Sbjct: 160 IGSANLKEGLFHLDIGKERRSSTNNATATP-INNSNLWHFRLGHLSSNRLNVLNQQFPFI 218

Query: 181 YVDHNSVCDVCHYARHKKLPYFLTLSKATKPYELIHFDIWGPISTSSVHGHKYFLTVLDD 360
               N VCDVCH+A+ KKL Y  + S+ +K ++LIH DIWGP S +S+HGHKYFLT+LDD
Sbjct: 219 SKHSNEVCDVCHFAKQKKLSYSPSSSRVSKIFDLIHMDIWGPFSKASIHGHKYFLTILDD 278

Query: 361 YSRFTWIILLKSKAKVQLHVQDFVTMVEKEYDAKIKIICTDNGPEFLLPQFYKSKGIVHQ 540
           +SR+TW++LLKSK++V+ HV +F+ +VE +Y+ K+K I +DNGPEF L  F+ SKGI+HQ
Sbjct: 279 FSRYTWVVLLKSKSEVKTHVHNFINLVENQYETKVKCIRSDNGPEFFLRDFFNSKGIIHQ 338

Query: 541 TSCVESPQQNGRVERKLQHILNVGRALLFQSKRPKIF*SYAVLYATYIVNRVPSPLLQNK 720
           TSCV +PQQNGRVERK QHILNV RAL+FQSK P  F SYA+ +A +++NRVPSP++ +K
Sbjct: 339 TSCVYTPQQNGRVERKHQHILNVARALMFQSKLPSNFWSYAIKHAIFLINRVPSPIISHK 398

Query: 721 CPYTLLYGQTPDLNQIRVF 777
            P+ LL    PD + ++VF
Sbjct: 399 TPFELLNKIPPDFSMLKVF 417


>KYP70579.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 288

 Score =  281 bits (719), Expect = 9e-92
 Identities = 127/265 (47%), Positives = 192/265 (72%), Gaps = 6/265 (2%)
 Frame = +1

Query: 1   IGLANQCEGLYSLVVDAKN-----AFVSSTARGSDSIPAEALWHFRLGHMSNKRLNLVHS 165
           IG A + +GLY L+   +      + +++++  + +    ALWHFRLGH+S  RLN++  
Sbjct: 2   IGFAEEVDGLYYLIKTCQKPTTNTSQINTSSTHNSTYSPNALWHFRLGHISESRLNMLSE 61

Query: 166 QFSFVY-VDHNSVCDVCHYARHKKLPYFLTLSKATKPYELIHFDIWGPISTSSVHGHKYF 342
            +SF+   +H  VCDVCH+A+ +KLP+ ++ SK ++P+EL+H D+WGP S  +V+  +YF
Sbjct: 62  LYSFINNCNHKHVCDVCHFAKQRKLPFSVSNSKTSRPFELLHLDLWGPYSIQTVNHQRYF 121

Query: 343 LTVLDDYSRFTWIILLKSKAKVQLHVQDFVTMVEKEYDAKIKIICTDNGPEFLLPQFYKS 522
           LT++DDYSR+TW+ILLK+K++ +  ++ F  +V++++ +KIK I TDNGPEF L  FY+ 
Sbjct: 122 LTIVDDYSRYTWVILLKNKSQTEQSLRHFSKLVDRQFHSKIKTIRTDNGPEFFLHSFYQE 181

Query: 523 KGIVHQTSCVESPQQNGRVERKLQHILNVGRALLFQSKRPKIF*SYAVLYATYIVNRVPS 702
           +GI+HQTSCVE+PQQNGRVER+ Q ILNV RALLFQ   PK F  +AV +  +++N+VP+
Sbjct: 182 EGIIHQTSCVETPQQNGRVERRHQTILNVARALLFQGNLPKSFWGFAVTHVVHLINKVPT 241

Query: 703 PLLQNKCPYTLLYGQTPDLNQIRVF 777
            +L +K PY +LYG+ PDL  +RVF
Sbjct: 242 QVLGSKSPYQILYGELPDLKHLRVF 266


>KYP62795.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 301

 Score =  271 bits (693), Expect = 1e-87
 Identities = 126/262 (48%), Positives = 191/262 (72%), Gaps = 3/262 (1%)
 Frame = +1

Query: 1   IGLANQCEGLYSLV-VDAKNAFVSSTA--RGSDSIPAEALWHFRLGHMSNKRLNLVHSQF 171
           IG  +  +GLY L+ V  +   ++ST      + IP + LWHFRLGH+S++R++++  Q+
Sbjct: 3   IGSVDVRDGLYQLIPVHLQPHSINSTIIHPKCNVIPID-LWHFRLGHLSSERMHIMQQQY 61

Query: 172 SFVYVDHNSVCDVCHYARHKKLPYFLTLSKATKPYELIHFDIWGPISTSSVHGHKYFLTV 351
           S +  + N VC+ CHYA+ +KLP+ L+ S AT+P+ LIH DIWGP ST S++GH+YFLT+
Sbjct: 62  SCLNNNKNFVCNTCHYAKQRKLPFPLSNSHATQPFALIHMDIWGPYSTLSMNGHRYFLTI 121

Query: 352 LDDYSRFTWIILLKSKAKVQLHVQDFVTMVEKEYDAKIKIICTDNGPEFLLPQFYKSKGI 531
           +DD++R+TW+ L+ +K++ + H+ +F+ +VE ++D  +KIICTDNG EF + + +  KGI
Sbjct: 122 VDDHTRYTWVYLMCNKSETRTHITNFINLVENQFDTHVKIICTDNGNEFFMHELFHLKGI 181

Query: 532 VHQTSCVESPQQNGRVERKLQHILNVGRALLFQSKRPKIF*SYAVLYATYIVNRVPSPLL 711
           +HQTSC+E+PQQNG VERK QH+LNV RALLF S  P  F S+A+L+ATY++N +P+P L
Sbjct: 182 IHQTSCIETPQQNGIVERKHQHLLNVTRALLFHSNLPDCFWSFALLHATYLINCIPTPFL 241

Query: 712 QNKCPYTLLYGQTPDLNQIRVF 777
           +N  P+  L+G   D+  I+VF
Sbjct: 242 KNTSPFEKLHGVQCDIAMIKVF 263


>ABD32334.2 Polynucleotidyl transferase, Ribonuclease H fold [Medicago
            truncatula]
          Length = 772

 Score =  284 bits (727), Expect = 2e-87
 Identities = 140/277 (50%), Positives = 188/277 (67%), Gaps = 18/277 (6%)
 Frame = +1

Query: 1    IGLANQCEGLYSLVVDAKNA----FVSSTARGSD--------------SIPAEALWHFRL 126
            IGL N C+GLY L   A  +    F+SS    ++              SIP+ A+WHFRL
Sbjct: 486  IGLGNLCDGLYRLHPFAPASPQAHFISSAVSPTNKMSCNSVSSNNNVSSIPSNAIWHFRL 545

Query: 127  GHMSNKRLNLVHSQFSFVYVDHNSVCDVCHYARHKKLPYFLTLSKATKPYELIHFDIWGP 306
            GH+SN+RL+++HS +S + +D+ +                   S A+  +EL+HFDIWGP
Sbjct: 546  GHLSNQRLSMMHSLYSSITIDNKAY------------------SIASSKFELLHFDIWGP 587

Query: 307  ISTSSVHGHKYFLTVLDDYSRFTWIILLKSKAKVQLHVQDFVTMVEKEYDAKIKIICTDN 486
            +S +SVHGHKYFLT++DD+SRF W+ILLK+K++V  HV++FV ++   Y    K I +DN
Sbjct: 588  LSVTSVHGHKYFLTIVDDFSRFLWVILLKNKSEVSNHVKNFVVLIHTHYQITPKYIRSDN 647

Query: 487  GPEFLLPQFYKSKGIVHQTSCVESPQQNGRVERKLQHILNVGRALLFQSKRPKIF*SYAV 666
            GPEFL+P+FY SKGI+HQ SCVE+PQQNGRVERK QHILNV RALLFQSK P  F SYAV
Sbjct: 648  GPEFLIPEFYASKGIIHQKSCVETPQQNGRVERKHQHILNVARALLFQSKLPNFFWSYAV 707

Query: 667  LYATYIVNRVPSPLLQNKCPYTLLYGQTPDLNQIRVF 777
            ++A +++N+VP+PL + K PY LLY   PD+N  +VF
Sbjct: 708  IHAVFLINKVPTPLFKQKSPYQLLYDSLPDINSFKVF 744


>KYP68194.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 914

 Score =  279 bits (714), Expect = 2e-84
 Identities = 139/265 (52%), Positives = 180/265 (67%), Gaps = 6/265 (2%)
 Frame = +1

Query: 1    IGLANQCEGLY--SLVVDAKNAFVSSTARGSDS--IPAEA--LWHFRLGHMSNKRLNLVH 162
            IG A    GLY  + +V++  + V ST   + S   P+    LWH+RLGH    R   + 
Sbjct: 480  IGTAKAERGLYIFTQIVESSQSSVYSTISENFSCNFPSSLPNLWHYRLGHPCFDRSQALS 539

Query: 163  SQFSFVYVDHNSVCDVCHYARHKKLPYFLTLSKATKPYELIHFDIWGPISTSSVHGHKYF 342
              F F+Y + N VCD+CH A+ +KL + L+ S     +ELIH DIWGP+   S+HGH YF
Sbjct: 540  EMFPFIYCNKNHVCDICHIAKQRKLSFPLSSSSTNTIFELIHADIWGPVFVMSIHGHSYF 599

Query: 343  LTVLDDYSRFTWIILLKSKAKVQLHVQDFVTMVEKEYDAKIKIICTDNGPEFLLPQFYKS 522
            LT++DDYSR TWI LLK+KA+V+  +Q F  +VE ++   +K I TDNG EF   QFY +
Sbjct: 600  LTIVDDYSRHTWIYLLKNKAEVRPLIQAFCALVENQFQTTVKTIRTDNGKEFKFDQFYAT 659

Query: 523  KGIVHQTSCVESPQQNGRVERKLQHILNVGRALLFQSKRPKIF*SYAVLYATYIVNRVPS 702
            KGIVHQTSCVE+PQQN  VERK QHILNV RALLFQ+  PKIF SYAV ++ Y++NR+P+
Sbjct: 660  KGIVHQTSCVETPQQNSIVERKHQHILNVARALLFQANLPKIFWSYAVTHSVYLINRIPT 719

Query: 703  PLLQNKCPYTLLYGQTPDLNQIRVF 777
            P+L NKCPY LLY   PDL Q++VF
Sbjct: 720  PVLDNKCPYQLLYKCLPDLTQLKVF 744


>GAU15708.1 hypothetical protein TSUD_307180 [Trifolium subterraneum]
          Length = 1433

 Score =  278 bits (712), Expect = 2e-82
 Identities = 135/266 (50%), Positives = 183/266 (68%), Gaps = 7/266 (2%)
 Frame = +1

Query: 1    IGLANQCEGLYSLVVDAKNAF-------VSSTARGSDSIPAEALWHFRLGHMSNKRLNLV 159
            IG      GLY L  +  NA        V+ T     SIP  ALWHFR GH SN RL ++
Sbjct: 459  IGSGKLLNGLYYL--EGTNASTHSLVKPVTGTVCTVFSIPQSALWHFRFGHASNSRLEIM 516

Query: 160  HSQFSFVYVDHNSVCDVCHYARHKKLPYFLTLSKATKPYELIHFDIWGPISTSSVHGHKY 339
            H  +  + ++ + VCDVCH A+ KKL Y L+ SK+TK +EL+H DIWGP ST+++HGHKY
Sbjct: 517  HKSYPSISINKDCVCDVCHLAKQKKLSYSLSTSKSTKCFELLHMDIWGPYSTATLHGHKY 576

Query: 340  FLTVLDDYSRFTWIILLKSKAKVQLHVQDFVTMVEKEYDAKIKIICTDNGPEFLLPQFYK 519
            FLT++DD+SRFTW+ILLK K +V  HVQ F+ +VE ++++ +KI+ +DNGPEF L  FY 
Sbjct: 577  FLTIVDDFSRFTWVILLKGKNEVASHVQHFIHLVENQFESTVKIVRSDNGPEFSLSSFYA 636

Query: 520  SKGIVHQTSCVESPQQNGRVERKLQHILNVGRALLFQSKRPKIF*SYAVLYATYIVNRVP 699
            SK IVHQTSCV +PQQNGRVERK Q IL + RALL QS  P  +  YAVL++ Y++NR+P
Sbjct: 637  SKRIVHQTSCVYTPQQNGRVERKHQCILAIARALLIQSHLPAKYWGYAVLHSVYLMNRMP 696

Query: 700  SPLLQNKCPYTLLYGQTPDLNQIRVF 777
            S  ++   PY  L+ + PD++ +++F
Sbjct: 697  SVAIEGGLPYHKLHNRLPDISMLKIF 722


>KYP44664.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 290

 Score =  256 bits (654), Expect = 7e-82
 Identities = 111/222 (50%), Positives = 163/222 (73%)
 Frame = +1

Query: 112 WHFRLGHMSNKRLNLVHSQFSFVYVDHNSVCDVCHYARHKKLPYFLTLSKATKPYELIHF 291
           WHFR+GH+S +RL L+ S + F+  + N  C+ CHY +HKKL +  + S A+  ++L+H 
Sbjct: 1   WHFRMGHLSTERLQLMQSCYPFLRSNKNFTCNTCHYEKHKKLSFPASKSHASNCFDLLHM 60

Query: 292 DIWGPISTSSVHGHKYFLTVLDDYSRFTWIILLKSKAKVQLHVQDFVTMVEKEYDAKIKI 471
           DIWGP S  S+HGH+YFLT++DD+SRFTW+ L+ +K + + ++ DF+  +E +++ KIKI
Sbjct: 61  DIWGPCSKLSMHGHRYFLTIVDDHSRFTWVYLMHTKTETRKNITDFIAYIETQFNNKIKI 120

Query: 472 ICTDNGPEFLLPQFYKSKGIVHQTSCVESPQQNGRVERKLQHILNVGRALLFQSKRPKIF 651
           I TDNG EF +  F+ SKGI+HQT+CVE+P+QNG VERK QH+LNV RALLF +  P+ F
Sbjct: 121 IRTDNGSEFAMHDFFASKGIIHQTTCVETPEQNGIVERKHQHLLNVTRALLFHANLPQSF 180

Query: 652 *SYAVLYATYIVNRVPSPLLQNKCPYTLLYGQTPDLNQIRVF 777
             +A+L+A Y++N +P+P LQN  PY  LYG   D++ +R+F
Sbjct: 181 WCFALLHAAYLINCIPTPFLQNISPYEKLYGSPCDISNLRIF 222


>XP_016690731.1 PREDICTED: uncharacterized protein LOC107907947 [Gossypium hirsutum]
          Length = 667

 Score =  266 bits (679), Expect = 3e-81
 Identities = 125/259 (48%), Positives = 179/259 (69%)
 Frame = +1

Query: 1    IGLANQCEGLYSLVVDAKNAFVSSTARGSDSIPAEALWHFRLGHMSNKRLNLVHSQFSFV 180
            IG+A    GLY L   A+   +S+    S +  + +LWH RLGH+S+ RL L+      +
Sbjct: 347  IGIARVLHGLYILDSPAQTFSISTPIALSANTTSCSLWHHRLGHLSDSRLKLLFPYIPSL 406

Query: 181  YVDHNSVCDVCHYARHKKLPYFLTLSKATKPYELIHFDIWGPISTSSVHGHKYFLTVLDD 360
             + +N+ C  CH A+ KK+ + ++ S + K +EL+H DIWGP    S+ GH+YFLT++DD
Sbjct: 407  SMSNNATCKACHLAKQKKISFSVSTSVSNKIFELVHVDIWGPTDVISITGHRYFLTIVDD 466

Query: 361  YSRFTWIILLKSKAKVQLHVQDFVTMVEKEYDAKIKIICTDNGPEFLLPQFYKSKGIVHQ 540
            +SRFTWIILLK+K++V+ H+Q+F T+VE ++ +KIK+I ++NG EF++P FY SKG++HQ
Sbjct: 467  FSRFTWIILLKAKSEVRTHIQNFFTLVETQFSSKIKVIRSNNGCEFVIPTFYASKGVIHQ 526

Query: 541  TSCVESPQQNGRVERKLQHILNVGRALLFQSKRPKIF*SYAVLYATYIVNRVPSPLLQNK 720
            T+CVE+PQQNG VERK QHILNV RALLF S   K F  +AVL+A +++NR P+PLL N 
Sbjct: 527  TTCVETPQQNGLVERKHQHILNVARALLFHSHLLKHFWGHAVLHAVFLINRTPTPLLANL 586

Query: 721  CPYTLLYGQTPDLNQIRVF 777
             P+  LY   P    I +F
Sbjct: 587  TPFDKLYQTKPSFQHICIF 605


>KHN01991.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Glycine soja]
          Length = 1311

 Score =  271 bits (693), Expect = 6e-80
 Identities = 130/261 (49%), Positives = 180/261 (68%), Gaps = 2/261 (0%)
 Frame = +1

Query: 1    IGLANQCEGLYSLVVDAKNAFVSSTARGSDS--IPAEALWHFRLGHMSNKRLNLVHSQFS 174
            IG+  +  GLY L+ D  N  + ST        IP + LWHFR+GH+S +RL  +   + 
Sbjct: 365  IGIVEEKHGLYHLIPDQVNKVICSTIIHPKCKIIPID-LWHFRMGHLSTERLQCMKPHYP 423

Query: 175  FVYVDHNSVCDVCHYARHKKLPYFLTLSKATKPYELIHFDIWGPISTSSVHGHKYFLTVL 354
             +  D   VC+ CHYA+HKKLP+  + S A+  + L+H DIWGP S  S+HGHKYFLT++
Sbjct: 424  ILRNDKTFVCNTCHYAKHKKLPFSSSTSHASHIFYLLHVDIWGPCSKPSMHGHKYFLTIV 483

Query: 355  DDYSRFTWIILLKSKAKVQLHVQDFVTMVEKEYDAKIKIICTDNGPEFLLPQFYKSKGIV 534
            DD+SRFTW+ L+ +KA+ +  + +F+  VE +Y+ KIK I +DNG EFL+P FY SKGI+
Sbjct: 484  DDHSRFTWVHLMHTKAETRDIIVNFIASVETQYNKKIKKIRSDNGYEFLMPSFYASKGIM 543

Query: 535  HQTSCVESPQQNGRVERKLQHILNVGRALLFQSKRPKIF*SYAVLYATYIVNRVPSPLLQ 714
            HQT+CVE+P+QNG  ERK QH+LNV RALLFQ+  P  F  YA+L+ATY+VN +P+P L 
Sbjct: 544  HQTTCVETPEQNGIAERKHQHLLNVTRALLFQANLPSNFWCYALLHATYLVNCIPTPFLH 603

Query: 715  NKCPYTLLYGQTPDLNQIRVF 777
            N  PY  L+G  P+++ +RVF
Sbjct: 604  NVSPYEKLHGHLPEISHLRVF 624


>KYP61041.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 788

 Score =  264 bits (675), Expect = 1e-79
 Identities = 120/264 (45%), Positives = 186/264 (70%), Gaps = 5/264 (1%)
 Frame = +1

Query: 1   IGLANQCEGLYSLVVDAKNAFVSSTARG-----SDSIPAEALWHFRLGHMSNKRLNLVHS 165
           IG+ + C GLY+L  +A+   +S T        S  +P + LWHFRLGH S KRL  +  
Sbjct: 88  IGIVDVCNGLYTL--EARPVTMSPTCSSVIHPVSIVVPID-LWHFRLGHPSCKRLESMMK 144

Query: 166 QFSFVYVDHNSVCDVCHYARHKKLPYFLTLSKATKPYELIHFDIWGPISTSSVHGHKYFL 345
           Q+ ++ ++ N  C  CHY++ +KL + L++SK ++ +E+IH DIWGP S  S+HGH+YFL
Sbjct: 145 QYPYITINKNFSCSTCHYSKQRKLLFSLSISKTSRAFEIIHVDIWGPCSVISMHGHRYFL 204

Query: 346 TVLDDYSRFTWIILLKSKAKVQLHVQDFVTMVEKEYDAKIKIICTDNGPEFLLPQFYKSK 525
           T++DD++R+TW+ L+ SK++ + H+ +F+++VE+++D K+KII +DNG EFL+  FY+ K
Sbjct: 205 TIVDDFTRYTWVYLMNSKSETRKHIINFISLVERQFDTKVKIIRSDNGAEFLMNNFYQEK 264

Query: 526 GIVHQTSCVESPQQNGRVERKLQHILNVGRALLFQSKRPKIF*SYAVLYATYIVNRVPSP 705
           GI+HQTSC+E+P+QNG VERK QH+LNV RALLF +  P +F  +A+ +A  I+N +P+P
Sbjct: 265 GIIHQTSCIETPEQNGIVERKHQHLLNVTRALLFHNGLPPLFWCFAIQHAATIINCIPTP 324

Query: 706 LLQNKCPYTLLYGQTPDLNQIRVF 777
           +L    P+  LY +  D++  RVF
Sbjct: 325 ILHETSPFIKLYNKQYDISLFRVF 348


>KYP47160.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 284

 Score =  250 bits (638), Expect = 1e-79
 Identities = 125/267 (46%), Positives = 178/267 (66%), Gaps = 8/267 (2%)
 Frame = +1

Query: 1   IGLANQCEGLYSL---VVDAKN-----AFVSSTARGSDSIPAEALWHFRLGHMSNKRLNL 156
           IGLA   + LY +    V   N     AFVS T   +       LWHFRLGH S + L +
Sbjct: 10  IGLAKANQHLYLMHNPCVSHSNSICNSAFVSKTQNKN----MFDLWHFRLGHPSYQVLKI 65

Query: 157 VHSQFSFVYVDHNSVCDVCHYARHKKLPYFLTLSKATKPYELIHFDIWGPISTSSVHGHK 336
           V     +V  + N+VCD CH A+  +LP+ ++ SK+   +EL+H DIWGPI+ +S+HGH+
Sbjct: 66  VKKHSPYVEFNDNTVCDYCHLAKQSRLPFPVSNSKSFSCFELVHMDIWGPIAITSIHGHR 125

Query: 337 YFLTVLDDYSRFTWIILLKSKAKVQLHVQDFVTMVEKEYDAKIKIICTDNGPEFLLPQFY 516
           +FLT+++D+SR TW  L+KSKA+ +  + +FV ++E  ++ +IK I TDNG EFL+  FY
Sbjct: 126 FFLTIVNDFSRHTWTFLMKSKAETRKLIHNFVALIETRFNKRIKTIRTDNGSEFLMHDFY 185

Query: 517 KSKGIVHQTSCVESPQQNGRVERKLQHILNVGRALLFQSKRPKIF*SYAVLYATYIVNRV 696
              GI+HQTSC+E+PQQN  VERK +HILNV R+LLF S  PK+F +YAV YA +++NR+
Sbjct: 186 AQHGILHQTSCIETPQQNSVVERKHRHILNVTRSLLFHSNLPKVFWNYAVSYAVHLINRL 245

Query: 697 PSPLLQNKCPYTLLYGQTPDLNQIRVF 777
           PSP+L N  P+ +LY Q+  L  ++VF
Sbjct: 246 PSPVLNNCSPFQMLYDQSHTLLDLKVF 272


>KYP64985.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1394

 Score =  270 bits (691), Expect = 1e-79
 Identities = 129/268 (48%), Positives = 185/268 (69%), Gaps = 9/268 (3%)
 Frame = +1

Query: 1    IGLANQCEGLYSLV---------VDAKNAFVSSTARGSDSIPAEALWHFRLGHMSNKRLN 153
            IG A + +GLY L          V   +    S     +++   ALWH RLGH SN  L 
Sbjct: 425  IGAARKIDGLYCLEESNDLNCTKVLQHSVINKSNISVVNAVNTGALWHHRLGHTSNSILQ 484

Query: 154  LVHSQFSFVYVDHNSVCDVCHYARHKKLPYFLTLSKATKPYELIHFDIWGPISTSSVHGH 333
            L+ SQ++ +   + + CD CH+A+HKKLP+ + +SK++  +EL+H DIWGP+ T S+ GH
Sbjct: 485  LLSSQYNDIIYKNCTPCDTCHFAKHKKLPFPVCISKSSHLFELLHADIWGPLHTISIDGH 544

Query: 334  KYFLTVLDDYSRFTWIILLKSKAKVQLHVQDFVTMVEKEYDAKIKIICTDNGPEFLLPQF 513
            KYFLT++DD+SRFTW+ LLKSKA+V+  +  F+ ++E ++  K+K + +DNG EF L  F
Sbjct: 545  KYFLTLVDDFSRFTWVHLLKSKAEVKTVLPKFIHLIENQFGIKLKRLRSDNGKEFFLTDF 604

Query: 514  YKSKGIVHQTSCVESPQQNGRVERKLQHILNVGRALLFQSKRPKIF*SYAVLYATYIVNR 693
            + SKGI H+TSC+E+PQQNG VERK QHILNV RALLFQS    +F SYA+ +A +++NR
Sbjct: 605  FSSKGIFHETSCIETPQQNGIVERKHQHILNVARALLFQSGLSSVFWSYAIKHAVHLINR 664

Query: 694  VPSPLLQNKCPYTLLYGQTPDLNQIRVF 777
            +P+P L+NK PY  ++G+ PDL+ +RVF
Sbjct: 665  LPTPFLENKSPYESVFGKIPDLSTLRVF 692


>GAU36337.1 hypothetical protein TSUD_321760 [Trifolium subterraneum]
          Length = 1094

 Score =  268 bits (686), Expect = 2e-79
 Identities = 128/260 (49%), Positives = 185/260 (71%), Gaps = 1/260 (0%)
 Frame = +1

Query: 1    IGLANQCEGLYSLVVDAKNAFVSSTARGSDSIPAEALWHFRLGHMSNKRLNLVHSQFSFV 180
            IGLA Q +GLY L     +  +S  +  + S  +  LWH RLGH+S +R+  ++ ++S++
Sbjct: 437  IGLAKQSDGLYFLKPCQVSQSISVHSIDTSSNNSGLLWHLRLGHLSFERIKCLNKRYSYI 496

Query: 181  -YVDHNSVCDVCHYARHKKLPYFLTLSKATKPYELIHFDIWGPISTSSVHGHKYFLTVLD 357
              +DHN  CDVCH A+ K+LP+ ++ S AT  ++LIH DIWGP ST SVHG KYFLT+LD
Sbjct: 497  PALDHNP-CDVCHMAKQKRLPFPVSNSNATSSFDLIHADIWGPFSTVSVHGFKYFLTILD 555

Query: 358  DYSRFTWIILLKSKAKVQLHVQDFVTMVEKEYDAKIKIICTDNGPEFLLPQFYKSKGIVH 537
            D+SR+ W+I+LK+K +V  ++Q FV MV+ ++   IK I TDNGPEF+L  FY  KGI+H
Sbjct: 556  DHSRYLWVIMLKTKHEVPAYIQGFVNMVKTQFGKLIKAIRTDNGPEFMLQSFYHEKGILH 615

Query: 538  QTSCVESPQQNGRVERKLQHILNVGRALLFQSKRPKIF*SYAVLYATYIVNRVPSPLLQN 717
            Q SCV +PQQN RVER+ QHILN+ RAL+FQS  PK++ S+A+ +A +++NR P+ LL +
Sbjct: 616  QKSCVSTPQQNARVERRHQHILNISRALMFQSGLPKVYWSHAIQHAVFLINRTPTKLLVD 675

Query: 718  KCPYTLLYGQTPDLNQIRVF 777
            K P+ +L+G  P+L  ++ F
Sbjct: 676  KSPFEILHGAEPNLTVLKPF 695


>KYP34293.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1376

 Score =  270 bits (689), Expect = 3e-79
 Identities = 128/263 (48%), Positives = 187/263 (71%), Gaps = 4/263 (1%)
 Frame = +1

Query: 1    IGLANQCEGLYSLVVDA-KNAFVSSTA--RGSDSIPAEALWHFRLGHMSNKRLNLVHSQF 171
            IG  +   GLY L+    K  F+ ST      D IP + LWHFRLGH+SN RL+ +   +
Sbjct: 408  IGSVDVRGGLYQLIPHHFKPPFIHSTIIHPKCDVIPID-LWHFRLGHLSNTRLHNMQQLY 466

Query: 172  SFVYVDHNSVCDVCHYARHKKLPYFLTLSKATKPYELIHFDIWGPIST-SSVHGHKYFLT 348
              + ++ +  C++CHYA+ +KL +  + S A++P+ L+H DIWGP S  SS+HGHK+F T
Sbjct: 467  PCLTINKDFTCNICHYAKQRKLSFSSSHSTASRPFSLLHMDIWGPYSCISSIHGHKFFFT 526

Query: 349  VLDDYSRFTWIILLKSKAKVQLHVQDFVTMVEKEYDAKIKIICTDNGPEFLLPQFYKSKG 528
            ++DD + FTWI L+ +K++ ++H+ +F+ ++E +++ +I+ I TDNG EFL+  F+ SKG
Sbjct: 527  IVDDNTHFTWIFLMINKSETRMHISNFINLIENQFNTRIQTIQTDNGAEFLMQNFFNSKG 586

Query: 529  IVHQTSCVESPQQNGRVERKLQHILNVGRALLFQSKRPKIF*SYAVLYATYIVNRVPSPL 708
            IVHQT+C+E+PQQNG VERK QH+LNV  ALLF SK P  F SYA+L+ATY++NR+ +PL
Sbjct: 587  IVHQTTCIETPQQNGVVERKHQHLLNVTHALLFHSKLPYCFWSYALLHATYLINRITTPL 646

Query: 709  LQNKCPYTLLYGQTPDLNQIRVF 777
            L NK P+  LYGQT D+ ++RVF
Sbjct: 647  LDNKTPFQKLYGQTCDITELRVF 669


>KYP72197.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 384

 Score =  253 bits (645), Expect = 3e-79
 Identities = 127/268 (47%), Positives = 183/268 (68%), Gaps = 9/268 (3%)
 Frame = +1

Query: 1   IGLANQCEGLYSLV----VDAKNA---FVSSTARGSD--SIPAEALWHFRLGHMSNKRLN 153
           IG A Q  GL+ L     +D+  +    VS +   SD  +I    LWH RLGH SNK L 
Sbjct: 20  IGAAKQWNGLFYLQDSSDLDSHESSLNHVSPSLNFSDVTTIDNSMLWHLRLGHTSNKVLK 79

Query: 154 LVHSQFSFVYVDHNSVCDVCHYARHKKLPYFLTLSKATKPYELIHFDIWGPISTSSVHGH 333
            + S+++ +       CD CHYA+ KKLP+ ++  K+++ +ELIH DIWGP++T+S+ G 
Sbjct: 80  HLSSKYNDIVFYCLQPCDTCHYAKQKKLPFPVSNCKSSRFFELIHVDIWGPVATTSIDGF 139

Query: 334 KYFLTVLDDYSRFTWIILLKSKAKVQLHVQDFVTMVEKEYDAKIKIICTDNGPEFLLPQF 513
           KYFL+V+DD+SRFTWI L+K+K  V+  +  F+ ++E ++  K++ I +DNG EF L  F
Sbjct: 140 KYFLSVVDDFSRFTWIHLIKTKFDVKFMLPSFIQLIENQFTLKLQRIRSDNGKEFSLNDF 199

Query: 514 YKSKGIVHQTSCVESPQQNGRVERKLQHILNVGRALLFQSKRPKIF*SYAVLYATYIVNR 693
           + +KGI H+TSCVE+PQQNG VERK QH+LNV RALLFQ+  P  F S+AV +AT+++NR
Sbjct: 200 FSTKGIFHETSCVETPQQNGIVERKHQHLLNVSRALLFQANLPTCFWSFAVRHATHLINR 259

Query: 694 VPSPLLQNKCPYTLLYGQTPDLNQIRVF 777
           +P+P L+ K PY L+YG  P LN +++F
Sbjct: 260 LPTPFLKLKTPYELVYGHAPVLNTLKIF 287