BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza35_contig00036810
         (340 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AAW63130.1 31 kDa putative protein [Strawberry latent ringspot v...   115   3e-29
NP_620833.1 36 kDa protein [Strawberry latent ringspot virus sat...   108   3e-26

>AAW63130.1 31 kDa putative protein [Strawberry latent ringspot virus satellite
           RNA]
          Length = 287

 Score =  115 bits (288), Expect = 3e-29
 Identities = 62/103 (60%), Positives = 73/103 (70%), Gaps = 6/103 (5%)
 Frame = +1

Query: 49  LPKRVRVCSKSTGRFFTVGRHDLHLLPSGKRAWVPLRNPTSAGGSSRRERPQRAVTKQPV 228
           LPKRVRV SK +GR FTVGRHDLH+LPSGKRAWVP+R P +AGG+ RRERP     K   
Sbjct: 14  LPKRVRVVSKRSGRIFTVGRHDLHVLPSGKRAWVPVRAPIAAGGNFRRERPLVVSHKTQQ 73

Query: 229 VRPIRAP--VKVENRFSPLCVEE----SLVAPKKSKITYADVV 339
           VRPIR P  VK  NRF+PL V+E    ++ AP   K +YAD +
Sbjct: 74  VRPIRMPAAVKTSNRFAPLSVKEGVTAAVAAPINPKKSYADAL 116


>NP_620833.1 36 kDa protein [Strawberry latent ringspot virus satellite RNA]
           pir||JQ2018 hypothetical 36.5K protein - strawberry
           latent ringspot virus [Strawberry latent ringspot virus]
           CAA49480.1 36 kDa protein [Strawberry latent ringspot
           virus satellite RNA]
          Length = 331

 Score =  108 bits (270), Expect = 3e-26
 Identities = 62/103 (60%), Positives = 69/103 (66%), Gaps = 6/103 (5%)
 Frame = +1

Query: 49  LPKRVRVCSKSTGRFFTVGRHDLHLLPSGKRAWVPLRNPTSAGGSSRRERPQRAVTKQPV 228
           LPKRVRV SK   R FTVGRHDLH+LPSGKRAWVP+R P +AGGS RRERP     K   
Sbjct: 14  LPKRVRVISKRRARIFTVGRHDLHVLPSGKRAWVPVRAPIAAGGSFRRERPPVVSHKTQQ 73

Query: 229 VRPIRAP--VKVENRFSPLCVEE---SLVAP-KKSKITYADVV 339
           VRPIR P  VK  NRF+ L V+E     VAP    K +YAD +
Sbjct: 74  VRPIRTPTAVKTSNRFASLSVKEEAPEAVAPFNPKKKSYADAL 116