BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza35_contig00035363
         (798 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GAU50297.1 hypothetical protein TSUD_288310 [Trifolium subterran...   249   8e-76
GAU17063.1 hypothetical protein TSUD_105620 [Trifolium subterran...   236   3e-72
GAU10400.1 hypothetical protein TSUD_423410, partial [Trifolium ...   231   6e-72
GAU49954.1 hypothetical protein TSUD_180180 [Trifolium subterran...   237   2e-68
GAU33259.1 hypothetical protein TSUD_333820 [Trifolium subterran...   219   2e-67
GAU50246.1 hypothetical protein TSUD_188980 [Trifolium subterran...   221   3e-66
ABE80156.1 Ribonuclease H [Medicago truncatula]                       219   2e-65
GAU18899.1 hypothetical protein TSUD_228890 [Trifolium subterran...   224   3e-63
GAU22350.1 hypothetical protein TSUD_106780 [Trifolium subterran...   223   5e-63
GAU20604.1 hypothetical protein TSUD_33400 [Trifolium subterraneum]   222   2e-62
GAU11845.1 hypothetical protein TSUD_75960 [Trifolium subterraneum]   208   6e-62
GAU12283.1 hypothetical protein TSUD_141910 [Trifolium subterran...   219   1e-61
GAU35042.1 hypothetical protein TSUD_30080 [Trifolium subterraneum]   215   2e-61
GAU41508.1 hypothetical protein TSUD_302460 [Trifolium subterran...   218   2e-61
GAU35137.1 hypothetical protein TSUD_394630 [Trifolium subterran...   206   1e-59
GAU28886.1 hypothetical protein TSUD_293380 [Trifolium subterran...   199   2e-59
ABO80459.1 RNA-directed DNA polymerase (Reverse transcriptase); ...   210   5e-59
ABD28627.2 RNA-directed DNA polymerase (Reverse transcriptase); ...   210   3e-58
GAU40444.1 hypothetical protein TSUD_397630 [Trifolium subterran...   195   4e-58
GAU23316.1 hypothetical protein TSUD_237700 [Trifolium subterran...   195   2e-56

>GAU50297.1 hypothetical protein TSUD_288310 [Trifolium subterraneum]
          Length = 545

 Score =  249 bits (635), Expect = 8e-76
 Identities = 119/263 (45%), Positives = 166/263 (63%)
 Frame = -2

Query: 797  IPTLSMLHHRGIITNAECKSCHGVEETLLHCLRDCSMAKRLWRSLGFTDVSFFQETDALN 618
            +PT SML HRG++    C  C+  EE+ LHCLR+C   KR W+++GF   +FFQ  +  +
Sbjct: 253  LPTKSMLSHRGLLQANLCPRCNIEEESTLHCLRNCEFIKRFWKAIGFLGQTFFQGDNLND 312

Query: 617  WLNLGATGPKDTLFIAGVWWSWKFRNAKCFNDDNIPFPRLHLSVLNLAETFKVCYKKDHT 438
            WL     GP   LF+A VWW W  RN  C +++ I +  L  +  NLA+  ++C+ K + 
Sbjct: 313  WLRNSIDGPSSFLFMAAVWWIWCARNQLCMDNEAISYFTLRTNTENLAQLLRMCFIKQNI 372

Query: 437  SSNPARQISWYERDREGVILNVDGSSLGNPGPAGFGGLARNPEGGWIFGFSGHIGFSEVL 258
            SS  A  + W      G+ILNVDGSS+GNPG +GFGGL RN +G W+ GF+G+IG   +L
Sbjct: 373  SST-ATMVRWNAHGGIGMILNVDGSSIGNPGISGFGGLIRNSDGAWVHGFAGNIGHLNIL 431

Query: 257  KAELLGISNGLKLAWEKGHRNITCYTDSLTATILVNDHDTTFHRHASILQDIRDLMKLPW 78
            +AELL I +GL LAWE   +++ CY+DS TA  L+ DH   +H++A+I+ +I+D +   W
Sbjct: 432  QAELLAIYHGLVLAWELDIKDLCCYSDSKTALKLIYDHVNEWHQYAAIIYNIKDFLSRNW 491

Query: 77   DVELRHTLREGNQCADHFAKLGA 9
             V L H LREGN CAD   K GA
Sbjct: 492  RVRLVHMLREGNNCADILDKFGA 514


>GAU17063.1 hypothetical protein TSUD_105620 [Trifolium subterraneum]
          Length = 440

 Score =  236 bits (603), Expect = 3e-72
 Identities = 114/263 (43%), Positives = 160/263 (60%)
 Frame = -2

Query: 797 IPTLSMLHHRGIITNAECKSCHGVEETLLHCLRDCSMAKRLWRSLGFTDVSFFQETDALN 618
           +PT +ML HR +++   C      EET++HCLRDC   K LW+++GFTD +FF   +   
Sbjct: 148 LPTRAMLSHRRLLSVHVCPRSDIAEETIMHCLRDCEFVKHLWKTIGFTDQTFFHGDNLYA 207

Query: 617 WLNLGATGPKDTLFIAGVWWSWKFRNAKCFNDDNIPFPRLHLSVLNLAETFKVCYKKDHT 438
           WL  G   P   +F+A +WW W+ RN  C  ++ +    +   + + A   K CY +   
Sbjct: 208 WLRKGCDSPSMFMFLAALWWIWRARNKLCLANELVSPFTISRCIEDYALLVKKCYSQQK- 266

Query: 437 SSNPARQISWYERDREGVILNVDGSSLGNPGPAGFGGLARNPEGGWIFGFSGHIGFSEVL 258
           S+   R + W   D   +ILNVDGSS+GNP   GFGGL RN  G WI GF+G+IGFS +L
Sbjct: 267 STLANRLVRWNAHDGTDMILNVDGSSIGNPEIYGFGGLIRNSHGAWIRGFAGNIGFSNIL 326

Query: 257 KAELLGISNGLKLAWEKGHRNITCYTDSLTATILVNDHDTTFHRHASILQDIRDLMKLPW 78
            AELL + +GL LAW+   +++ CY+DS TA  L+ D    +H  A+ILQ+I+D++   W
Sbjct: 327 HAELLAVYHGLVLAWDMDIKDLICYSDSKTAIKLIGDPINEWHHFAAILQNIKDILARDW 386

Query: 77  DVELRHTLREGNQCADHFAKLGA 9
            V + HTLREGN CAD+ AK GA
Sbjct: 387 RVTVAHTLREGNACADYLAKFGA 409


>GAU10400.1 hypothetical protein TSUD_423410, partial [Trifolium subterraneum]
          Length = 284

 Score =  231 bits (588), Expect = 6e-72
 Identities = 109/247 (44%), Positives = 157/247 (63%)
 Frame = -2

Query: 746 CKSCHGVEETLLHCLRDCSMAKRLWRSLGFTDVSFFQETDALNWLNLGATGPKDTLFIAG 567
           C  C   EET+LHCLRDC +++R+W SLGF + SFF  +D   WL   + G     F+AG
Sbjct: 7   CTRCSSGEETILHCLRDCPISRRIWNSLGFQNSSFFSCSDLELWLRNNSIGLNAPTFLAG 66

Query: 566 VWWSWKFRNAKCFNDDNIPFPRLHLSVLNLAETFKVCYKKDHTSSNPARQISWYERDREG 387
           +WW+W+ RN  C  + +I   ++   V  L      C+     +  P R ISW+    + 
Sbjct: 67  LWWNWRARNIFCVGNASIHSFKVVAEVSKLVALIVFCFPARVHTDTPRRWISWHPCKTDC 126

Query: 386 VILNVDGSSLGNPGPAGFGGLARNPEGGWIFGFSGHIGFSEVLKAELLGISNGLKLAWEK 207
           V+LNVDGS LG+PG AGFGGL R  +G WI GFSG++G + ++ AEL+ + +GLK+A E 
Sbjct: 127 VVLNVDGSCLGDPGRAGFGGLFRKGDGEWIRGFSGYLGVTNIMLAELMAVYHGLKIAREA 186

Query: 206 GHRNITCYTDSLTATILVNDHDTTFHRHASILQDIRDLMKLPWDVELRHTLREGNQCADH 27
           G+  + CY+DS T   L++    +FH +A+I+ +I+DL+ L WDV L+H+LREGN CAD 
Sbjct: 187 GYNRLFCYSDSKTVLDLLSKERNSFHCYAAIIANIQDLLVLEWDVSLKHSLREGNFCADF 246

Query: 26  FAKLGAS 6
            AKLG++
Sbjct: 247 LAKLGSA 253


>GAU49954.1 hypothetical protein TSUD_180180 [Trifolium subterraneum]
          Length = 968

 Score =  237 bits (604), Expect = 2e-68
 Identities = 119/265 (44%), Positives = 163/265 (61%), Gaps = 1/265 (0%)
 Frame = -2

Query: 797  IPTLSMLHHRGIITNAECKSCHGVEETLLHCLRDCSMAKRLWRSLGFTDVSFFQETDALN 618
            +PTLS+L+HR +  +  C  C   +E+ LHC+RDC  ++ LW  +GFT+ +FF   D  +
Sbjct: 674  VPTLSLLNHRKMNPSTTCVRCGLQDESFLHCIRDCDFSRSLWHHIGFTNPNFFSNMDVYD 733

Query: 617  WLNLGATGPKDTLFIAGVWWSWKFRNAKCFNDDNIPFPRLHLSVLNLAETFKVCYKKDHT 438
            WL +GATG +  +F AGVWWSW+ RN    N++     RL  ++ ++ ETFK C      
Sbjct: 734  WLKMGATGTQSLIFSAGVWWSWRHRNLMSLNNETWTLSRLSFNIRSMVETFKNCCTPVSN 793

Query: 437  SSNPARQISWYERDREGVILNVDGSSLGNPGPAGFGGLARNPEGGWIFGFSGHI-GFSEV 261
              +  R I W   +    ILNVDGS LG+P  AGFGG+ RN  G ++ GFSG+I G S++
Sbjct: 794  VGSVDRFIKWKNNNFSCTILNVDGSCLGSPARAGFGGIIRNTFGYYLAGFSGYIQGSSDI 853

Query: 260  LKAELLGISNGLKLAWEKGHRNITCYTDSLTATILVNDHDTTFHRHASILQDIRDLMKLP 81
            L AEL  I  GL LA   G   + CY+DSL    L+      +H HA ++QDI++L+ L 
Sbjct: 854  LYAELYAIYKGLLLAKNMGIDELVCYSDSLHCINLIKGPQVKYHIHAVLIQDIKELISLN 913

Query: 80   WDVELRHTLREGNQCADHFAKLGAS 6
             +V L HTLREGNQCAD FAKLGA+
Sbjct: 914  -NVSLCHTLREGNQCADFFAKLGAT 937


>GAU33259.1 hypothetical protein TSUD_333820 [Trifolium subterraneum]
          Length = 284

 Score =  219 bits (558), Expect = 2e-67
 Identities = 109/265 (41%), Positives = 159/265 (60%), Gaps = 6/265 (2%)
 Frame = -2

Query: 782 MLHHRGIITNAECKSCHGVEETLLHCLRDCSMAKRLWRSLGFTDVSFFQETDALNWLNLG 603
           MLHHR + ++  C  C   EET+LHCLRDC +++R+W SLGF + SFF  +D   WL   
Sbjct: 1   MLHHRNLSSSDICTRCSSGEETILHCLRDCPISRRIWNSLGFQNSSFFSCSDLELWLRNN 60

Query: 602 ATGPKDTLFIAGVWWSWKFRNAKCFNDDNIPFPRLHLSVLNLAETFKVCYKKDHTSSNPA 423
           + G     F+AG+WW+W+ RN  C  + +I   ++   V  L      C+          
Sbjct: 61  SIGLNAPTFLAGLWWNWRARNICCVGNASIHSFKVVAEVSKLVALIVSCFP--------- 111

Query: 422 RQISWYERDR------EGVILNVDGSSLGNPGPAGFGGLARNPEGGWIFGFSGHIGFSEV 261
              +W   D       + V+LNVDGS LG+PG AGFGGL R  +G WI G SG++G + +
Sbjct: 112 ---AWVRTDTPRVCKTDCVVLNVDGSCLGDPGRAGFGGLFRKGDGEWIRGSSGYLGVTNI 168

Query: 260 LKAELLGISNGLKLAWEKGHRNITCYTDSLTATILVNDHDTTFHRHASILQDIRDLMKLP 81
             AEL+ + +GLK+A E G+  + CY+DS T   L++    +FH +A+I+ +I+DL+ L 
Sbjct: 169 TLAELMAVYHGLKIAREAGYNRLFCYSDSKTVLDLLSKERNSFHCYAAIIANIQDLLVLE 228

Query: 80  WDVELRHTLREGNQCADHFAKLGAS 6
           WDV L+H++REGN CAD  AKLG++
Sbjct: 229 WDVSLKHSVREGNFCADFLAKLGSA 253


>GAU50246.1 hypothetical protein TSUD_188980 [Trifolium subterraneum]
          Length = 458

 Score =  221 bits (564), Expect = 3e-66
 Identities = 110/265 (41%), Positives = 156/265 (58%), Gaps = 1/265 (0%)
 Frame = -2

Query: 797 IPTLSMLHHRGIITNAECKSCHGVEETLLHCLRDCSMAKRLWRSLGFTDVSFFQETDALN 618
           +PTLS+LHHR +  ++ C  C   EET LHC+RDC +++ +W  LGF    FF  +DA  
Sbjct: 164 VPTLSLLHHRRMNPSSNCPRCCTHEETFLHCVRDCDLSRPIWHRLGFITPDFFSSSDAHE 223

Query: 617 WLNLGATGPKDTLFIAGVWWSWKFRNAKCFNDDNIPFPRLHLSVLNLAETFKVCYKKDHT 438
           WL  G+TG +   F   VWW+W+ +N  C  ++     RL  ++ +++ T   C+    T
Sbjct: 224 WLKFGSTGSQAFAFSTSVWWAWRHQNLMCLQNETWSINRLSFNIQSMSATITSCFSSRST 283

Query: 437 SSNPARQISWYERDREGVILNVDGSSLGNPGPAGFGGLARNPEGGWIFGFSGHI-GFSEV 261
           +++    + W   +  GVILNVDGS LG+P  AGFGG+ RN  G ++ GFSG I G S++
Sbjct: 284 TTSEEIHVKWNNNNFPGVILNVDGSCLGSPVRAGFGGVIRNESGFYLSGFSGFIQGSSDI 343

Query: 260 LKAELLGISNGLKLAWEKGHRNITCYTDSLTATILVNDHDTTFHRHASILQDIRDLMKLP 81
           L AEL  I   L LA       + CY+DSL    L+      +H +A ++QDI++LM   
Sbjct: 344 LLAELFVIYKSLTLAKNMAIDELVCYSDSLHCINLIKGPSIKYHVYAVLIQDIKELMSQS 403

Query: 80  WDVELRHTLREGNQCADHFAKLGAS 6
            ++ L HTLREGN CAD  AKLGAS
Sbjct: 404 -NITLCHTLREGNNCADFLAKLGAS 427


>ABE80156.1 Ribonuclease H [Medicago truncatula]
          Length = 438

 Score =  219 bits (557), Expect = 2e-65
 Identities = 103/265 (38%), Positives = 158/265 (59%), Gaps = 1/265 (0%)
 Frame = -2

Query: 797 IPTLSMLHHRGIITNAECKSCHGVEETLLHCLRDCSMAKRLWRSLGFTDVSFFQETDALN 618
           +PTLS+LH R I  +  C  C   +ET LHC+RDC  ++ +W+ +GFT   FF  T A +
Sbjct: 144 VPTLSLLHRRNIAPSPTCARCGEEDETFLHCVRDCHFSRSIWQKIGFTGNDFFTATSAHD 203

Query: 617 WLNLGATGPKDTLFIAGVWWSWKFRNAKCFNDDNIPFPRLHLSVLNLAETFKVCYKKDHT 438
           W  +G +     +F  G+WW+W+ RN  C N++ +   RL  ++++ A   K  +  +  
Sbjct: 204 WFKIGMSSSLPDIFFGGLWWAWRHRNLMCLNNETMSLFRLCNNIVSAATYIKSAFDSEEN 263

Query: 437 SSNPARQISWYERDREGVILNVDGSSLGNPGPAGFGGLARNPEGGWIFGFSGHI-GFSEV 261
            ++  R + W  R+    ILNVDGS LG P   G+GG+ RN  G +I GFSG I   +++
Sbjct: 264 VNHSDRFVKWNNRNHHDHILNVDGSCLGTPSRTGYGGILRNSAGLFISGFSGFIPNSTDI 323

Query: 260 LKAELLGISNGLKLAWEKGHRNITCYTDSLTATILVNDHDTTFHRHASILQDIRDLMKLP 81
           L+AEL  I   L +  +    ++ CY+DSL A  L+ +    +H +A ++Q+I+DL+ + 
Sbjct: 324 LQAELTAIHQSLHMVIDSNMNDVMCYSDSLLAVNLIMNDTPRYHTYAVLIQNIKDLLSVR 383

Query: 80  WDVELRHTLREGNQCADHFAKLGAS 6
            ++ L HTLREGNQCAD FAKLGA+
Sbjct: 384 -NITLHHTLREGNQCADFFAKLGAN 407


>GAU18899.1 hypothetical protein TSUD_228890 [Trifolium subterraneum]
          Length = 1098

 Score =  224 bits (570), Expect = 3e-63
 Identities = 115/265 (43%), Positives = 159/265 (60%), Gaps = 1/265 (0%)
 Frame = -2

Query: 797  IPTLSMLHHRGIITNAECKSCHGVEETLLHCLRDCSMAKRLWRSLGFTDVSFFQETDALN 618
            +PTL+MLHHR I ++  C  C    ET LHC+RDC  +K +W  LGFT+ SFF  T A  
Sbjct: 805  VPTLAMLHHRNIASSPICPRCSNHNETFLHCVRDCIHSKTVWDQLGFTNSSFFDSTMAHE 864

Query: 617  WLNLGATGPKDTLFIAGVWWSWKFRNAKCFNDDNIPFPRLHLSVLNLAETFKVCYKKDHT 438
            WL      P+  LF+AGVWW W+ RN  C  D+     RL  ++ ++ E  K C+    T
Sbjct: 865  WLKHSYFSPRRLLFLAGVWWIWRHRNNMCLGDETWSAVRLSCNIYSMVEDLKNCFPSS-T 923

Query: 437  SSNPARQISWYERDREGVILNVDGSSLGNPGPAGFGGLARNPEGGWIFGFSGHI-GFSEV 261
            +   +R I W   +  GV++N DGS  G P   GFG + RN +G +I G SGHI   S++
Sbjct: 924  TEETSRCIKWNFTNFTGVVINTDGSCSGTPARTGFGCIIRNNDGRYITGASGHITNSSDI 983

Query: 260  LKAELLGISNGLKLAWEKGHRNITCYTDSLTATILVNDHDTTFHRHASILQDIRDLMKLP 81
            L AEL GI +GL+LA   G  +  CYTDSL +  L+    + +H +  ++Q+I+D M+  
Sbjct: 984  LLAELSGIYHGLQLAISLGITDFICYTDSLISCNLIQGVSSPYHIYGVLIQNIKDSMQQS 1043

Query: 80   WDVELRHTLREGNQCADHFAKLGAS 6
             ++ + HTLREGNQCAD+ AKLGAS
Sbjct: 1044 -NIIICHTLREGNQCADYLAKLGAS 1067


>GAU22350.1 hypothetical protein TSUD_106780 [Trifolium subterraneum]
          Length = 1200

 Score =  223 bits (569), Expect = 5e-63
 Identities = 105/236 (44%), Positives = 142/236 (60%)
 Frame = -2

Query: 797  IPTLSMLHHRGIITNAECKSCHGVEETLLHCLRDCSMAKRLWRSLGFTDVSFFQETDALN 618
            +PT  ML HRGIIT   C  C    ET +HCLRDC    R+W+S+GF D +FFQ  D   
Sbjct: 963  LPTRDMLAHRGIITRNLCPRCSNHAETTIHCLRDCDFVNRIWKSIGFLDQNFFQGVDVYA 1022

Query: 617  WLNLGATGPKDTLFIAGVWWSWKFRNAKCFNDDNIPFPRLHLSVLNLAETFKVCYKKDHT 438
            WL+ G   P   LFIAG+WW W+ RNA C + + + F    L +++ A   K CY   H 
Sbjct: 1023 WLHNGLNSPTMMLFIAGIWWIWRARNAMCLDSEMVSFWSQKLRIMDYALLLKNCYFSTHE 1082

Query: 437  SSNPARQISWYERDREGVILNVDGSSLGNPGPAGFGGLARNPEGGWIFGFSGHIGFSEVL 258
             S   + + W      G+ILNVDGSS+GNPG +GFGGL RN +G WI GF G++G + +L
Sbjct: 1083 IST-TKFVKWNALGGTGLILNVDGSSIGNPGISGFGGLIRNADGAWIHGFFGNLGVTNIL 1141

Query: 257  KAELLGISNGLKLAWEKGHRNITCYTDSLTATILVNDHDTTFHRHASILQDIRDLM 90
              EL+ I  GL LAWE   + + CY+DS  A  L+ D    +H +A+IL +I+D++
Sbjct: 1142 HPELMAIYKGLLLAWELNIKELWCYSDSKMAIKLITDPTDVWHHYAAILNNIKDIL 1197


>GAU20604.1 hypothetical protein TSUD_33400 [Trifolium subterraneum]
          Length = 1174

 Score =  222 bits (565), Expect = 2e-62
 Identities = 113/265 (42%), Positives = 156/265 (58%), Gaps = 1/265 (0%)
 Frame = -2

Query: 797  IPTLSMLHHRGIITNAECKSCHGVEETLLHCLRDCSMAKRLWRSLGFTDVSFFQETDALN 618
            +PTLSMLHHR I +   C  C    ET LHC+RDC  ++ +W  LGFT   FF  T   +
Sbjct: 880  VPTLSMLHHRNIASCPICTRCGQQIETFLHCVRDCIFSRPVWIRLGFTSRIFFDITSVHD 939

Query: 617  WLNLGATGPKDTLFIAGVWWSWKFRNAKCFNDDNIPFPRLHLSVLNLAETFKVCYKKDHT 438
            WL      P   +F+AGVWW W+ RN  C +++   F R+  ++ ++ +T K C+     
Sbjct: 940  WLKSAYFRPHRFVFMAGVWWLWRHRNLMCLSNETWSFVRISCNIYSMGDTLKTCFPSSSP 999

Query: 437  SSNPARQISWYERDREGVILNVDGSSLGNPGPAGFGGLARNPEGGWIFGFSGH-IGFSEV 261
                 R + W   D  G ILN+DGS  G P   GFG + RN  G +I G SGH IG S++
Sbjct: 1000 EETSNRTVKWNSTDFTGFILNMDGSCSGTPIRCGFGCIIRNNVGSYIAGASGHIIGSSDI 1059

Query: 260  LKAELLGISNGLKLAWEKGHRNITCYTDSLTATILVNDHDTTFHRHASILQDIRDLMKLP 81
            L AEL GI +GLKLA   G  ++ CYTDSL +  L+    + +H +  ++Q+I+D M+  
Sbjct: 1060 LLAELSGIFHGLKLASSLGITDLICYTDSLLSCNLIQGPYSHYHIYGVLIQNIKDYMQQS 1119

Query: 80   WDVELRHTLREGNQCADHFAKLGAS 6
             ++ + HTLREGNQCAD+ AKLGAS
Sbjct: 1120 -NINICHTLREGNQCADYLAKLGAS 1143


>GAU11845.1 hypothetical protein TSUD_75960 [Trifolium subterraneum]
          Length = 386

 Score =  208 bits (530), Expect = 6e-62
 Identities = 101/240 (42%), Positives = 147/240 (61%)
 Frame = -2

Query: 797 IPTLSMLHHRGIITNAECKSCHGVEETLLHCLRDCSMAKRLWRSLGFTDVSFFQETDALN 618
           +PT  ML HRGII    C  C+   ET LHCLRDC     +W+SLGFTD +FFQE D+ +
Sbjct: 148 LPTRDMLTHRGIIHGNMCPRCNIHVETDLHCLRDCDFVYTIWKSLGFTDHNFFQEVDSSS 207

Query: 617 WLNLGATGPKDTLFIAGVWWSWKFRNAKCFNDDNIPFPRLHLSVLNLAETFKVCYKKDHT 438
           WL  G +     LF+A +WW W+ RNA C +++ +P   L + +++ A   K C+     
Sbjct: 208 WLRNGLSCSSMFLFMAAIWWIWRTRNALCLDNELVPQFSLKMRIVDYALLLKNCHFNYQV 267

Query: 437 SSNPARQISWYERDREGVILNVDGSSLGNPGPAGFGGLARNPEGGWIFGFSGHIGFSEVL 258
           ++ P + + W       +ILNVD SS+GNPG +GFGGL  N  G WI GF G++G + +L
Sbjct: 268 TTLP-KIVRWNALGGTSMILNVDRSSIGNPGISGFGGLICNAYGAWIHGFFGNLGVTNIL 326

Query: 257 KAELLGISNGLKLAWEKGHRNITCYTDSLTATILVNDHDTTFHRHASILQDIRDLMKLPW 78
            AEL+ I  GL LAWE   ++++CY+DS TA  L+ +    +H +A+IL +I+D++   W
Sbjct: 327 HAELMAILKGLLLAWELNIKDLSCYSDSATAIKLITEPVDVWHHYAAILNNIKDILNRDW 386


>GAU12283.1 hypothetical protein TSUD_141910 [Trifolium subterraneum]
          Length = 1049

 Score =  219 bits (558), Expect = 1e-61
 Identities = 103/244 (42%), Positives = 154/244 (63%)
 Frame = -2

Query: 737  CHGVEETLLHCLRDCSMAKRLWRSLGFTDVSFFQETDALNWLNLGATGPKDTLFIAGVWW 558
            C+   ET LHCLRDC  A+ +W+S+GF++++FFQ  D   W+  G       LF+A +WW
Sbjct: 777  CNTHLETTLHCLRDCDFAQSIWKSIGFSNLNFFQGDDPYVWIRNGLHCSSMFLFMATIWW 836

Query: 557  SWKFRNAKCFNDDNIPFPRLHLSVLNLAETFKVCYKKDHTSSNPARQISWYERDREGVIL 378
             W+ RNA C N ++I F  L L +++ A   + C+   H +S  ++ + W      G+IL
Sbjct: 837  IWRARNALCLNSESILFYSLKLRIMDYALLIENCHSNHHDTST-SKLVKWNALGGTGMIL 895

Query: 377  NVDGSSLGNPGPAGFGGLARNPEGGWIFGFSGHIGFSEVLKAELLGISNGLKLAWEKGHR 198
            NVDGSSLGNPG +GFGGL  N +G W+ GF G++G + +L AEL  I  GL LAW+   +
Sbjct: 896  NVDGSSLGNPGISGFGGLIHNADGAWVLGFFGNLGVNNILHAELRAIYKGLLLAWDLNIK 955

Query: 197  NITCYTDSLTATILVNDHDTTFHRHASILQDIRDLMKLPWDVELRHTLREGNQCADHFAK 18
            ++ CY+DS  A  L+++    +H +A+IL +I+D+++  W V + HT REGN  AD+ AK
Sbjct: 956  DLWCYSDSEMAIKLISESVDQWHHYAAILNNIQDILRRDWQVLILHTFREGNAYADYLAK 1015

Query: 17   LGAS 6
             GA+
Sbjct: 1016 HGAN 1019


>GAU35042.1 hypothetical protein TSUD_30080 [Trifolium subterraneum]
          Length = 724

 Score =  215 bits (547), Expect = 2e-61
 Identities = 107/263 (40%), Positives = 155/263 (58%)
 Frame = -2

Query: 797  IPTLSMLHHRGIITNAECKSCHGVEETLLHCLRDCSMAKRLWRSLGFTDVSFFQETDALN 618
            + T  ML HRGII                    DC+    +W+SLGFTD +FFQE D+ +
Sbjct: 451  LATRDMLTHRGII-------------------HDCNFVYTIWKSLGFTDRNFFQEVDSSS 491

Query: 617  WLNLGATGPKDTLFIAGVWWSWKFRNAKCFNDDNIPFPRLHLSVLNLAETFKVCYKKDHT 438
            WL  G +     LF+A +WW W+ RNA C +++ IP   L + +++ A   K C+     
Sbjct: 492  WLRNGLSCSSMFLFMAAIWWIWRTRNALCLDNELIPQFSLKMRIVDYALLLKNCHFNHQV 551

Query: 437  SSNPARQISWYERDREGVILNVDGSSLGNPGPAGFGGLARNPEGGWIFGFSGHIGFSEVL 258
            ++ P + + W       +ILNVDGS++GNPG +GFGGL RN +G WI GF G++G + +L
Sbjct: 552  TTLP-KIVRWNALGGTSMILNVDGSTIGNPGISGFGGLIRNADGAWIHGFFGNLGVTNIL 610

Query: 257  KAELLGISNGLKLAWEKGHRNITCYTDSLTATILVNDHDTTFHRHASILQDIRDLMKLPW 78
             AEL+ I  GL LAWE   +++ CY+DS TA  L+ +    +H +A+IL +I+D++   W
Sbjct: 611  HAELMAILKGLLLAWELNIKDLLCYSDSATAIKLITEPVDVWHHYAAILNNIKDILNRDW 670

Query: 77   DVELRHTLREGNQCADHFAKLGA 9
             V + HT REGN CAD+ AK GA
Sbjct: 671  QVSIFHTFREGNACADYLAKHGA 693


>GAU41508.1 hypothetical protein TSUD_302460 [Trifolium subterraneum]
          Length = 1075

 Score =  218 bits (556), Expect = 2e-61
 Identities = 111/265 (41%), Positives = 160/265 (60%), Gaps = 1/265 (0%)
 Frame = -2

Query: 797  IPTLSMLHHRGIITNAECKSCHGVEETLLHCLRDCSMAKRLWRSLGFTDVSFFQETDALN 618
            +PTLS+L+HR +  +  C  C   EET LHC+RDC  ++ +W  +GF D +FF  TDA  
Sbjct: 781  VPTLSLLNHRKMSNSFICARCGLQEETFLHCVRDCDFSRNIWHHIGFNDPTFFSFTDARE 840

Query: 617  WLNLGATGPKDTLFIAGVWWSWKFRNAKCFNDDNIPFPRLHLSVLNLAETFKVCYKKDHT 438
            WL +G+TG +   F A VWW+W+ RN  C N+++    RL  ++ ++ + F   +  +  
Sbjct: 841  WLKVGSTGSQAYTFSASVWWAWRHRNLMCLNNESWSLNRLSFNIHSMVDIFTSSFSSNSD 900

Query: 437  SSNPARQISWYERDREGVILNVDGSSLGNPGPAGFGGLARNPEGGWIFGFSGHI-GFSEV 261
             ++ +R I W   +   VILNVDGS LG+P  AG+GG+ RN  G ++ GFSG I   S++
Sbjct: 901  GTSVSRLIKWNNDNFSCVILNVDGSCLGSPVRAGYGGIIRNDSGFYLSGFSGFIRESSDI 960

Query: 260  LKAELLGISNGLKLAWEKGHRNITCYTDSLTATILVNDHDTTFHRHASILQDIRDLMKLP 81
            L AEL  I  GL LA +     + CY+DSL    L+      +H +A ++QDI++L+   
Sbjct: 961  LLAELYAIYQGLTLAKDLVIDELVCYSDSLLCINLIKGPIVKYHVYAVLIQDIKELISQS 1020

Query: 80   WDVELRHTLREGNQCADHFAKLGAS 6
             +V L HT REGNQCAD  AKLGAS
Sbjct: 1021 -NVTLCHTFREGNQCADFLAKLGAS 1044


>GAU35137.1 hypothetical protein TSUD_394630 [Trifolium subterraneum]
          Length = 547

 Score =  206 bits (525), Expect = 1e-59
 Identities = 98/236 (41%), Positives = 148/236 (62%)
 Frame = -2

Query: 797  IPTLSMLHHRGIITNAECKSCHGVEETLLHCLRDCSMAKRLWRSLGFTDVSFFQETDALN 618
            +PT  ML HRGI+    C  C+ + ET LHCLRDC   + +W+S+GF+D++FFQE D+ +
Sbjct: 311  LPTSEMLSHRGILQGNLCPRCNTLAETTLHCLRDCDFVQIIWKSIGFSDLNFFQEDDSYD 370

Query: 617  WLNLGATGPKDTLFIAGVWWSWKFRNAKCFNDDNIPFPRLHLSVLNLAETFKVCYKKDHT 438
            WL  G + P   +F+A VWW W+ RNA C N + IP   L L +++ A   + C    H 
Sbjct: 371  WLRNGLSFPSMFIFLAAVWWIWRARNALCLNSELIPLFALKLRIMDYALLLRNCQSNLHE 430

Query: 437  SSNPARQISWYERDREGVILNVDGSSLGNPGPAGFGGLARNPEGGWIFGFSGHIGFSEVL 258
            +S P + + W     + +ILNV+GSS+GNPG  GFGGL RN +G  + GF G++G + +L
Sbjct: 431  TSIP-KLVKWNAGGTD-MILNVEGSSIGNPGIYGFGGLIRNADGACVHGFFGNLGVTNIL 488

Query: 257  KAELLGISNGLKLAWEKGHRNITCYTDSLTATILVNDHDTTFHRHASILQDIRDLM 90
             AEL+ I  GL LAWE   +++ CY+DS     L+ +    +H +A+IL +I++++
Sbjct: 489  HAELMAIYKGLLLAWELNIKDLWCYSDSEMVIKLITEPVDEWHHYATILINIKEIL 544


>GAU28886.1 hypothetical protein TSUD_293380 [Trifolium subterraneum]
          Length = 286

 Score =  199 bits (506), Expect = 2e-59
 Identities = 103/243 (42%), Positives = 142/243 (58%), Gaps = 3/243 (1%)
 Frame = -2

Query: 725 EETLLHCLRDCSMAKRLWRSLGFTDVSFFQETDALNWLNLGATGPKDTLFI--AGVWWSW 552
           EET LHC+RDC +++ +W  LGF    FF  +DA  WL  G+TG +   F   AGVWW+W
Sbjct: 14  EETFLHCVRDCDLSRPIWHHLGFITPDFFSLSDAHEWLKFGSTGSQAFAFSFSAGVWWAW 73

Query: 551 KFRNAKCFNDDNIPFPRLHLSVLNLAETFKVCYKKDHTSSNPARQISWYERDREGVILNV 372
           + RN  C  ++     RL  ++ ++  T   C+    T+++    I W   +  GVILNV
Sbjct: 74  RHRNLMCLQNETWSINRLSFNIQSMIATITSCFSSRSTTTSEEIHIKWNNNNFPGVILNV 133

Query: 371 DGSSLGNPGPAGFGGLARNPEGGWIFGFSGHI-GFSEVLKAELLGISNGLKLAWEKGHRN 195
           DGS LG+P  AGFGG+ RN  G ++ GFSG I G S++L AEL  I  GL LA       
Sbjct: 134 DGSCLGSPVRAGFGGVIRNESGFYLSGFSGFIQGSSDILLAELFAIYKGLTLAKNMAIDE 193

Query: 194 ITCYTDSLTATILVNDHDTTFHRHASILQDIRDLMKLPWDVELRHTLREGNQCADHFAKL 15
           + CY+DSL    L+      +H +  ++QDI++LM    ++ L HTLREGN CA+  AKL
Sbjct: 194 LVCYSDSLHCINLIKGPSIKYHVYVVLIQDIKELMSQS-NITLCHTLREGNNCANFLAKL 252

Query: 14  GAS 6
           GAS
Sbjct: 253 GAS 255


>ABO80459.1 RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H
            [Medicago truncatula]
          Length = 869

 Score =  210 bits (535), Expect = 5e-59
 Identities = 106/264 (40%), Positives = 156/264 (59%), Gaps = 1/264 (0%)
 Frame = -2

Query: 797  IPTLSMLHHRGIITNAECKSCHGVEETLLHCLRDCSMAKRLWRSLGFTDVSFFQETDALN 618
            +PT ++LHHR II +A C  C   +E++ HC+RDC  +K +W  +GF++  FF  TD   
Sbjct: 575  LPTAALLHHRQIIASATCARCGVSDESVFHCIRDCPFSKIIWHHIGFSEPYFFAVTDIEI 634

Query: 617  WLNLGATGPKDTLFIAGVWWSWKFRNAKCFNDDNIPFPRLHLSVLNLAETFKVCYKKDHT 438
            W   G  G K  LF AG+WW W+ RNA+C +++++   RL  ++    +    C+ +   
Sbjct: 635  WCKSGLIGSKAILFAAGLWWIWRSRNARCMSEESMLLQRLAANITYFVDDINSCFFQPLP 694

Query: 437  SSNPARQISWYERDREGVILNVDGSSLGNPGPAGFGGLARNPEGGWIFGFSGHI-GFSEV 261
                 R + W   +    ILNVDGS +G+P  AGFGGL RN  G ++ GF G +   S++
Sbjct: 695  VMVSDRYVKWNNSNFNCTILNVDGSCIGSPIRAGFGGLIRNSVGFYLSGFLGFLPSSSDI 754

Query: 260  LKAELLGISNGLKLAWEKGHRNITCYTDSLTATILVNDHDTTFHRHASILQDIRDLMKLP 81
            L AEL  I +G+  A + G  ++  Y+DSL +  L+    + FH HA+++QDIRD + L 
Sbjct: 755  LLAELTAIYDGINTAIDMGITDMAVYSDSLLSINLITTTSSKFHIHAALIQDIRDKLSLR 814

Query: 80   WDVELRHTLREGNQCADHFAKLGA 9
             +  L HTLREGNQ AD+ AKLGA
Sbjct: 815  -NFSLNHTLREGNQSADYLAKLGA 837


>ABD28627.2 RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H
            [Medicago truncatula]
          Length = 1296

 Score =  210 bits (534), Expect = 3e-58
 Identities = 103/265 (38%), Positives = 155/265 (58%), Gaps = 2/265 (0%)
 Frame = -2

Query: 794  PTLSMLHHRGIITNAECKSCHGVEETLLHCLRDCSMAKRLWRSLGFTDVSFFQETDALNW 615
            PTLS+LHHR +   A C  C   +E+ LHC+RDC  +  +W  LGF   +FF  +   +W
Sbjct: 1002 PTLSLLHHRKMAPAATCSRCGENDESFLHCVRDCKHSAAIWHKLGFVTAAFFSVSSVQDW 1061

Query: 614  LNLGATGPKDTLFIAGVWWSWKFRNAKCFNDDNIPFPRLHLSVLNLAETFKVCYKKDHT- 438
            +   ++G +   F+AG+WWSW+ RN  C +++  P  R+   + +     +  + K +  
Sbjct: 1062 IRNFSSGSRAITFLAGLWWSWRHRNLMCLSNETWPLTRISFRINDSINAIRSAFVKSNVI 1121

Query: 437  SSNPARQISWYERDREGVILNVDGSSLGNPGPAGFGGLARNPEGGWIFGFSGHIGFS-EV 261
              + AR + W + + +  ILNVDGS LG P  AGFGG+ RN  GG++ G+SG I  S ++
Sbjct: 1122 QPDSARMVKWNQGNHQCHILNVDGSCLGTPIRAGFGGIFRNNVGGYLSGYSGFISESTDI 1181

Query: 260  LKAELLGISNGLKLAWEKGHRNITCYTDSLTATILVNDHDTTFHRHASILQDIRDLMKLP 81
            L AEL  +  GL +A E G   + CY+DSL    L+    + +H +A ++QDI+DL+   
Sbjct: 1182 LLAELTALHQGLIMAAEMGIEELACYSDSLLTINLITRTTSKYHTYAVLIQDIKDLLS-A 1240

Query: 80   WDVELRHTLREGNQCADHFAKLGAS 6
             +  + H  REGNQCAD+ AKLGAS
Sbjct: 1241 HNFSVYHCFREGNQCADYLAKLGAS 1265


>GAU40444.1 hypothetical protein TSUD_397630 [Trifolium subterraneum]
          Length = 275

 Score =  195 bits (496), Expect = 4e-58
 Identities = 100/241 (41%), Positives = 142/241 (58%), Gaps = 1/241 (0%)
 Frame = -2

Query: 725 EETLLHCLRDCSMAKRLWRSLGFTDVSFFQETDALNWLNLGATGPKDTLFIAGVWWSWKF 546
           +ET LHC+RDC  ++ +W  +GF D +FF  TDA  W  +G+TG +   F AGVWW+W+ 
Sbjct: 5   KETFLHCVRDCDFSRNIWHHIGFNDPTFFSFTDAREWRKVGSTGSQAYTFSAGVWWAWRH 64

Query: 545 RNAKCFNDDNIPFPRLHLSVLNLAETFKVCYKKDHTSSNPARQISWYERDREGVILNVDG 366
           RN  C N+D+    RL  ++ ++ + F   +  +   +  +R I W   +   VILNVDG
Sbjct: 65  RNWMCLNNDSWSLNRLSFNIQSMVDIFTSSFSSNSDGTAVSRLIKWNNDNFSCVILNVDG 124

Query: 365 SSLGNPGPAGFGGLARNPEGGWIFGFSGHI-GFSEVLKAELLGISNGLKLAWEKGHRNIT 189
           S L +P  AG+GG+ RN  G ++ GFSG I   S++L AEL  I  GL LA +     + 
Sbjct: 125 SCLDSPVRAGYGGIIRNDSGFYLSGFSGFIRESSDILLAELYAIYQGLTLAKDLAIDELV 184

Query: 188 CYTDSLTATILVNDHDTTFHRHASILQDIRDLMKLPWDVELRHTLREGNQCADHFAKLGA 9
           CY+DSL    L+      +H +A ++QDI +L+    +V L HT REGNQCAD   KLGA
Sbjct: 185 CYSDSLLCINLIKGPIVKYHVYAVLIQDINELI-CQSNVTLCHTFREGNQCADFLTKLGA 243

Query: 8   S 6
           S
Sbjct: 244 S 244


>GAU23316.1 hypothetical protein TSUD_237700 [Trifolium subterraneum]
          Length = 418

 Score =  195 bits (496), Expect = 2e-56
 Identities = 110/265 (41%), Positives = 146/265 (55%), Gaps = 1/265 (0%)
 Frame = -2

Query: 797 IPTLSMLHHRGIITNAECKSCHGVEETLLHCLRDCSMAKRLWRSLGFTDVSFFQETDALN 618
           +PTLS+L HR +  +A C  C   EET LHC+RDC  +  +W  +GF +  FF   DA +
Sbjct: 151 VPTLSLLDHRKMNLSATCARCGLREETFLHCVRDCDFSISIWHHIGFDNPDFFSSMDAHD 210

Query: 617 WLNLGATGPKDTLFIAGVWWSWKFRNAKCFNDDNIPFPRLHLSVLNLAETFKVCYKKDHT 438
           WL  G+TG K  +F AGVWWSW+  N  C N+                ET+ V       
Sbjct: 211 WLKWGSTGSKAFIFSAGVWWSWRNHNLMCLNN----------------ETWTV------- 247

Query: 437 SSNPARQISWYERDREGVILNVDGSSLGNPGPAGFGGLARNPEGGWIFGFSGHI-GFSEV 261
                R + W   +  GVILNVD S LG+P  +GFGG+ RN  G ++ GFSG I G S++
Sbjct: 248 ----DRVVKWNNNNFSGVILNVDESCLGSPIRSGFGGIFRNDSGFYLSGFSGFIQGSSDI 303

Query: 260 LKAELLGISNGLKLAWEKGHRNITCYTDSLTATILVNDHDTTFHRHASILQDIRDLMKLP 81
           + AE   I +GL LA +       CY+DSL    L+      +H HA ++QDI++ +   
Sbjct: 304 MLAEPYAIYHGLSLAEDMEINEFVCYSDSLHRINLITGLTLKYHVHAVLIQDIKEFLS-N 362

Query: 80  WDVELRHTLREGNQCADHFAKLGAS 6
            +V L HTL EGNQCAD FAK GAS
Sbjct: 363 RNVSLCHTLGEGNQCADFFAKHGAS 387