BLASTX nr result
ID: Glycyrrhiza35_contig00034342
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza35_contig00034342
(246 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAX19931.1 viral replicase [Nandina mosaic virus] 122 9e-31
AMN10083.1 RNA-dependent RNA polymerase [Plantago asiatica mosai... 120 8e-30
NP_620836.1 replicase [Plantago asiatica mosaic virus] Q07518.1 ... 119 2e-29
AGW45389.1 RNA-dependent RNA polymerase, partial [Plantago asiat... 114 1e-27
ANY93292.1 RdRp [Plantago asiatica mosaic virus] 114 1e-27
AMY62718.1 RNA-dependent RNA polymerase [Plantago asiatica mosai... 114 1e-27
AMY62703.1 RNA-dependent RNA polymerase [Plantago asiatica mosai... 114 1e-27
CEN56830.1 RNA-dependent RNA polymerase [Plantago asiatica mosai... 114 1e-27
AMY62713.1 RNA-dependent RNA polymerase [Plantago asiatica mosai... 112 6e-27
BAG12148.1 RNA-dependent RNA polymerase [Plantago asiatica mosai... 111 8e-27
BAG12143.1 RNA-dependent RNA polymerase [Plantago asiatica mosai... 111 8e-27
BAG12138.1 RNA-dependent RNA polymerase [Plantago asiatica mosai... 111 8e-27
BAG12133.1 RNA-dependent RNA polymerase [Plantago asiatica mosai... 111 8e-27
BAG12128.1 RNA-dependent RNA polymerase [Plantago asiatica mosai... 111 8e-27
BAG12123.1 RNA-dependent RNA polymerase [Plantago asiatica mosai... 111 8e-27
AMY62723.1 RNA-dependent RNA polymerase [Plantago asiatica mosai... 111 1e-26
BAG12153.1 RNA-dependent RNA polymerase [Plantago asiatica mosai... 110 2e-26
AMD78101.1 RdRP [Plantago asiatica mosaic virus] 108 1e-25
NP_702988.1 RNA-dependent RNA polymerase [Tulip virus X] BAC1678... 70 4e-12
>AAX19931.1 viral replicase [Nandina mosaic virus]
Length = 1368
Score = 122 bits (307), Expect = 9e-31
Identities = 56/80 (70%), Positives = 64/80 (80%)
Frame = +1
Query: 1 VLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHNPFTKPHPVNPEDADTM 180
+L FFRGRPSFVKLIKALDWQPITLEFPVR VNTRLRGPPGF +PFT+P PVNP+DA+T
Sbjct: 377 ILHFFRGRPSFVKLIKALDWQPITLEFPVRRVNTRLRGPPGFLSPFTRPQPVNPDDAETT 436
Query: 181 RAFREFSYTAETSTPTTIAD 240
+FREF S T+ +
Sbjct: 437 ESFREFIQPLNPSPTATVTE 456
>AMN10083.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1387
Score = 120 bits (300), Expect = 8e-30
Identities = 55/78 (70%), Positives = 62/78 (79%)
Frame = +1
Query: 1 VLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHNPFTKPHPVNPEDADTM 180
VLQFF+GRPSFVKLIKALDWQPITLEFPVR V T +RGPPGF NPFT+P PVNPEDADT
Sbjct: 377 VLQFFQGRPSFVKLIKALDWQPITLEFPVRDVRTTVRGPPGFKNPFTQPQPVNPEDADTS 436
Query: 181 RAFREFSYTAETSTPTTI 234
R F++F+ T+
Sbjct: 437 RGFQDFTRATTPKLQPTV 454
>NP_620836.1 replicase [Plantago asiatica mosaic virus] Q07518.1 RecName:
Full=RNA replication protein; AltName: Full=156 kDa
protein; AltName: Full=ORF1 protein; Includes: RecName:
Full=RNA-directed RNA polymerase; Includes: RecName:
Full=Helicase CAA79761.1 156K-protein [Plantago asiatica
mosaic virus]
Length = 1385
Score = 119 bits (298), Expect = 2e-29
Identities = 57/75 (76%), Positives = 62/75 (82%)
Frame = +1
Query: 1 VLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHNPFTKPHPVNPEDADTM 180
+LQFFRGRPSFVKLIKALDWQPITLEFPVR V T +RGPPGF NPFT+P PVNPEDAD
Sbjct: 375 ILQFFRGRPSFVKLIKALDWQPITLEFPVRDVRTTVRGPPGFKNPFTQPQPVNPEDADIS 434
Query: 181 RAFREFSYTAETSTP 225
F++FS A STP
Sbjct: 435 SRFQDFS-RATNSTP 448
>AGW45389.1 RNA-dependent RNA polymerase, partial [Plantago asiatica mosaic
virus]
Length = 669
Score = 114 bits (284), Expect = 1e-27
Identities = 51/70 (72%), Positives = 59/70 (84%)
Frame = +1
Query: 1 VLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHNPFTKPHPVNPEDADTM 180
+L FFRGRPSFVKLI+ALDWQPITLEFPVR VNT LRGPPGF +PFT+P PVNP+DA+T
Sbjct: 377 ILNFFRGRPSFVKLIQALDWQPITLEFPVRKVNTLLRGPPGFDSPFTRPQPVNPDDAETT 436
Query: 181 RAFREFSYTA 210
+F+ F A
Sbjct: 437 HSFQAFCQAA 446
>ANY93292.1 RdRp [Plantago asiatica mosaic virus]
Length = 1380
Score = 114 bits (284), Expect = 1e-27
Identities = 51/70 (72%), Positives = 59/70 (84%)
Frame = +1
Query: 1 VLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHNPFTKPHPVNPEDADTM 180
+L FFRGRPSFVKLI+ALDWQPITLEFPVR VNT LRGPPGF +PFT+P PVNP+DA+T
Sbjct: 377 ILNFFRGRPSFVKLIQALDWQPITLEFPVRKVNTLLRGPPGFDSPFTRPQPVNPDDAETT 436
Query: 181 RAFREFSYTA 210
+F+ F A
Sbjct: 437 HSFQAFCQAA 446
>AMY62718.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 114 bits (284), Expect = 1e-27
Identities = 51/70 (72%), Positives = 59/70 (84%)
Frame = +1
Query: 1 VLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHNPFTKPHPVNPEDADTM 180
+L FFRGRPSFVKLI+ALDWQPITLEFPVR VNT LRGPPGF +PFT+P PVNP+DA+T
Sbjct: 377 ILNFFRGRPSFVKLIQALDWQPITLEFPVRKVNTLLRGPPGFDSPFTRPQPVNPDDAETT 436
Query: 181 RAFREFSYTA 210
+F+ F A
Sbjct: 437 HSFQAFCQAA 446
>AMY62703.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
AMY62708.1 RNA-dependent RNA polymerase [Plantago
asiatica mosaic virus]
Length = 1380
Score = 114 bits (284), Expect = 1e-27
Identities = 51/70 (72%), Positives = 59/70 (84%)
Frame = +1
Query: 1 VLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHNPFTKPHPVNPEDADTM 180
+L FFRGRPSFVKLI+ALDWQPITLEFPVR VNT LRGPPGF +PFT+P PVNP+DA+T
Sbjct: 377 ILNFFRGRPSFVKLIQALDWQPITLEFPVRKVNTLLRGPPGFDSPFTRPQPVNPDDAETT 436
Query: 181 RAFREFSYTA 210
+F+ F A
Sbjct: 437 HSFQAFCQAA 446
>CEN56830.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 114 bits (284), Expect = 1e-27
Identities = 51/70 (72%), Positives = 59/70 (84%)
Frame = +1
Query: 1 VLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHNPFTKPHPVNPEDADTM 180
+L FFRGRPSFVKLI+ALDWQPITLEFPVR VNT LRGPPGF +PFT+P PVNP+DA+T
Sbjct: 377 ILNFFRGRPSFVKLIQALDWQPITLEFPVRKVNTLLRGPPGFDSPFTRPQPVNPDDAETT 436
Query: 181 RAFREFSYTA 210
+F+ F A
Sbjct: 437 HSFQAFCQAA 446
>AMY62713.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 112 bits (279), Expect = 6e-27
Identities = 50/70 (71%), Positives = 59/70 (84%)
Frame = +1
Query: 1 VLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHNPFTKPHPVNPEDADTM 180
+L FFRGRPSFVKLI+ALDWQPITLEFPVR V+T LRGPPGF +PFT+P PVNP+DA+T
Sbjct: 377 ILNFFRGRPSFVKLIQALDWQPITLEFPVRKVDTLLRGPPGFDSPFTRPQPVNPDDAETT 436
Query: 181 RAFREFSYTA 210
+F+ F A
Sbjct: 437 HSFQAFCQAA 446
>BAG12148.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 111 bits (278), Expect = 8e-27
Identities = 52/81 (64%), Positives = 60/81 (74%)
Frame = +1
Query: 1 VLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHNPFTKPHPVNPEDADTM 180
+L FFRGRPSFVKLIKALDWQPITLEFPVR VNT LRG PGF +PF +P PVNP+DA+T
Sbjct: 377 LLDFFRGRPSFVKLIKALDWQPITLEFPVRKVNTHLRGAPGFDSPFARPQPVNPDDAETT 436
Query: 181 RAFREFSYTAETSTPTTIADS 243
++F+ F T T S
Sbjct: 437 QSFQAFCQATATVEATLAQQS 457
>BAG12143.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 111 bits (278), Expect = 8e-27
Identities = 52/81 (64%), Positives = 60/81 (74%)
Frame = +1
Query: 1 VLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHNPFTKPHPVNPEDADTM 180
+L FFRGRPSFVKLIKALDWQPITLEFPVR VNT LRG PGF +PF +P PVNP+DA+T
Sbjct: 377 LLDFFRGRPSFVKLIKALDWQPITLEFPVRKVNTHLRGAPGFDSPFARPQPVNPDDAETT 436
Query: 181 RAFREFSYTAETSTPTTIADS 243
++F+ F T T S
Sbjct: 437 QSFQAFCQATATVEATLAQQS 457
>BAG12138.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 111 bits (278), Expect = 8e-27
Identities = 52/81 (64%), Positives = 60/81 (74%)
Frame = +1
Query: 1 VLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHNPFTKPHPVNPEDADTM 180
+L FFRGRPSFVKLIKALDWQPITLEFPVR VNT LRG PGF +PF +P PVNP+DA+T
Sbjct: 377 LLDFFRGRPSFVKLIKALDWQPITLEFPVRKVNTHLRGAPGFDSPFARPQPVNPDDAETT 436
Query: 181 RAFREFSYTAETSTPTTIADS 243
++F+ F T T S
Sbjct: 437 QSFQAFCQATATVEATLAQQS 457
>BAG12133.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 111 bits (278), Expect = 8e-27
Identities = 52/81 (64%), Positives = 60/81 (74%)
Frame = +1
Query: 1 VLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHNPFTKPHPVNPEDADTM 180
+L FFRGRPSFVKLIKALDWQPITLEFPVR VNT LRG PGF +PF +P PVNP+DA+T
Sbjct: 377 LLDFFRGRPSFVKLIKALDWQPITLEFPVRKVNTHLRGAPGFDSPFARPQPVNPDDAETT 436
Query: 181 RAFREFSYTAETSTPTTIADS 243
++F+ F T T S
Sbjct: 437 QSFQAFCQATATVEATLAQQS 457
>BAG12128.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 111 bits (278), Expect = 8e-27
Identities = 52/81 (64%), Positives = 60/81 (74%)
Frame = +1
Query: 1 VLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHNPFTKPHPVNPEDADTM 180
+L FFRGRPSFVKLIKALDWQPITLEFPVR VNT LRG PGF +PF +P PVNP+DA+T
Sbjct: 377 LLDFFRGRPSFVKLIKALDWQPITLEFPVRKVNTHLRGAPGFDSPFARPQPVNPDDAETT 436
Query: 181 RAFREFSYTAETSTPTTIADS 243
++F+ F T T S
Sbjct: 437 QSFQAFCQATATVEXTLAQQS 457
>BAG12123.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 111 bits (278), Expect = 8e-27
Identities = 52/81 (64%), Positives = 60/81 (74%)
Frame = +1
Query: 1 VLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHNPFTKPHPVNPEDADTM 180
+L FFRGRPSFVKLIKALDWQPITLEFPVR VNT LRG PGF +PF +P PVNP+DA+T
Sbjct: 377 LLDFFRGRPSFVKLIKALDWQPITLEFPVRKVNTHLRGAPGFDSPFARPQPVNPDDAETT 436
Query: 181 RAFREFSYTAETSTPTTIADS 243
++F+ F T T S
Sbjct: 437 QSFQAFCQATATVEATLAQQS 457
>AMY62723.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 111 bits (277), Expect = 1e-26
Identities = 49/66 (74%), Positives = 57/66 (86%)
Frame = +1
Query: 1 VLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHNPFTKPHPVNPEDADTM 180
+L FFRGRPSFVKLI+ALDWQPITLEFPVR VNT LRGPPGF +PF +P PVNP+DA+T
Sbjct: 377 ILNFFRGRPSFVKLIQALDWQPITLEFPVRKVNTLLRGPPGFDSPFARPQPVNPDDAETT 436
Query: 181 RAFREF 198
+F+ F
Sbjct: 437 HSFQAF 442
>BAG12153.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 110 bits (275), Expect = 2e-26
Identities = 50/73 (68%), Positives = 59/73 (80%)
Frame = +1
Query: 1 VLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHNPFTKPHPVNPEDADTM 180
+L FFRGRPSFVKLIKALDWQPITLEFPVR VNT LRG PGF +PF +P PVNP+DA+T
Sbjct: 377 LLNFFRGRPSFVKLIKALDWQPITLEFPVRKVNTHLRGAPGFDSPFARPQPVNPDDAETT 436
Query: 181 RAFREFSYTAETS 219
++F+ F T+
Sbjct: 437 QSFQAFCQATITA 449
>AMD78101.1 RdRP [Plantago asiatica mosaic virus]
Length = 1380
Score = 108 bits (269), Expect = 1e-25
Identities = 49/70 (70%), Positives = 57/70 (81%)
Frame = +1
Query: 1 VLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHNPFTKPHPVNPEDADTM 180
+L FFRGRPSFVKLI+ALDWQPITLEFPVR V+T LRGPP F +PFT+P PVNP+DA+T
Sbjct: 377 ILNFFRGRPSFVKLIQALDWQPITLEFPVRKVHTLLRGPPWFDSPFTRPQPVNPDDAETT 436
Query: 181 RAFREFSYTA 210
F+ F A
Sbjct: 437 HIFQAFCQAA 446
>NP_702988.1 RNA-dependent RNA polymerase [Tulip virus X] BAC16785.1
RNA-dependent RNA polymerase [Tulip virus X]
Length = 1361
Score = 69.7 bits (169), Expect = 4e-12
Identities = 33/62 (53%), Positives = 40/62 (64%)
Frame = +1
Query: 1 VLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHNPFTKPHPVNPEDADTM 180
+++FF+G P KLIKAL WQP+ LEF V TV R PPGF +P +P PVN DA T
Sbjct: 376 LVRFFKGSPDHTKLIKALQWQPVLLEFKVSTVLVHKRTPPGFRHPLCRPLPVNEVDALTT 435
Query: 181 RA 186
A
Sbjct: 436 AA 437