BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza35_contig00033465
         (327 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

WP_012497346.1 signal transduction histidine kinase [Rhodopseudo...   126   2e-32
WP_011159544.1 signal transduction histidine kinase [Rhodopseudo...   127   8e-32
WP_058193113.1 hypothetical protein [Methylobacterium sp. GXS13]...   108   4e-25
WP_058193904.1 hypothetical protein [Methylobacterium sp. GXS13]...   107   7e-25
SDM55488.1 GAF domain-containing protein [Methylobacterium phyll...   103   2e-24
SFM65064.1 Two-component sensor histidine kinase, contains HisKA...   104   6e-24
WP_051976212.1 MULTISPECIES: hypothetical protein [Bacteria] SFV...   103   1e-23
WP_051044712.1 MULTISPECIES: hypothetical protein [Methylobacter...   103   1e-23
AIQ92295.1 Sensor histidine kinase [Methylobacterium oryzae CBMB20]   103   1e-23
WP_052300039.1 hypothetical protein [Methylobacterium populi] OA...   102   5e-23
ACB80235.1 signal transduction histidine kinase [Methylobacteriu...   102   5e-23
SDA21646.1 PAS domain S-box-containing protein [Methylobacterium...   101   7e-23
WP_056242608.1 hypothetical protein [Methylobacterium sp. Leaf45...   100   2e-22
SFP67654.1 Two-component sensor histidine kinase, contains HisKA...    98   1e-21
WP_053221135.1 hypothetical protein [Methylobacterium platani]         98   1e-21
KMO10592.1 hypothetical protein SQ03_29845 [Methylobacterium pla...    98   2e-21
WP_048437429.1 hypothetical protein [Methylobacterium platani]         98   2e-21
WP_048434654.1 hypothetical protein [Methylobacterium platani] K...    97   2e-21
SDM53880.1 PAS domain S-box-containing protein [Methylobacterium...    94   3e-20
WP_064503953.1 hypothetical protein [Methylobacterium platani] O...    94   4e-20

>WP_012497346.1 signal transduction histidine kinase [Rhodopseudomonas palustris]
           ACF03031.1 signal transduction histidine kinase
           [Rhodopseudomonas palustris TIE-1]
          Length = 430

 Score =  126 bits (317), Expect = 2e-32
 Identities = 61/106 (57%), Positives = 79/106 (74%)
 Frame = +2

Query: 2   AILFNDVTDRRRAEVQRDALLSIGDRLRSLDKVPDTTAAASEIIGNALNAIRAGFGRVDA 181
           A+LFND+T RRR E++RDALL +GD+LRSL  + D T  ASEI+G AL A+RAGFGRV  
Sbjct: 56  AVLFNDITARRRGELRRDALLKMGDQLRSLTTIQDMTGIASEIVGRALGAVRAGFGRVAP 115

Query: 182 AREYITIEKDWSAEGFASLAGRHLLSDFGNLDAVISGKRPIIVSDV 319
             E + IE DWSAEG+ASLAG H LSD  + +   + K+P++V+DV
Sbjct: 116 GEESVIIENDWSAEGYASLAGWHSLSDHPSFETASATKQPVVVADV 161


>WP_011159544.1 signal transduction histidine kinase [Rhodopseudomonas palustris]
           CAE29450.1 putative signal transduction histidine kinase
           with GAF domain [Rhodopseudomonas palustris CGA009]
          Length = 682

 Score =  127 bits (318), Expect = 8e-32
 Identities = 61/106 (57%), Positives = 79/106 (74%)
 Frame = +2

Query: 2   AILFNDVTDRRRAEVQRDALLSIGDRLRSLDKVPDTTAAASEIIGNALNAIRAGFGRVDA 181
           A+LFND+T RRR E++RDALL +GD+LRSL  + D T  ASEI+G AL A+RAGFGRVD 
Sbjct: 308 AVLFNDITARRRGELRRDALLKMGDQLRSLTTIQDMTGIASEIVGRALGAVRAGFGRVDP 367

Query: 182 AREYITIEKDWSAEGFASLAGRHLLSDFGNLDAVISGKRPIIVSDV 319
             E + IE DWSA G+ASLAG H LSD  + +   + K+P++V+DV
Sbjct: 368 GEESVIIENDWSAAGYASLAGWHSLSDHPSFETANATKQPVVVADV 413


>WP_058193113.1 hypothetical protein [Methylobacterium sp. GXS13] KST58716.1
           hypothetical protein AO398_20955 [Methylobacterium sp.
           GXS13]
          Length = 834

 Score =  108 bits (269), Expect = 4e-25
 Identities = 51/106 (48%), Positives = 72/106 (67%)
 Frame = +2

Query: 2   AILFNDVTDRRRAEVQRDALLSIGDRLRSLDKVPDTTAAASEIIGNALNAIRAGFGRVDA 181
           A+ F ++TDR +A+ +R ALL++GDRLR L  +P+   AASEI+G  L   R GFGRVDA
Sbjct: 459 AVTFLEMTDRVQADARRVALLTLGDRLRDLTAIPEMILAASEIVGTTLGVTRTGFGRVDA 518

Query: 182 AREYITIEKDWSAEGFASLAGRHLLSDFGNLDAVISGKRPIIVSDV 319
           A E + IEKDW+A G  S+AGRH  +D+GN+   +     +++ DV
Sbjct: 519 AMECVNIEKDWTAPGTVSIAGRHRFADYGNIREDLRRGEALVIEDV 564


>WP_058193904.1 hypothetical protein [Methylobacterium sp. GXS13] KST57971.1
           hypothetical protein AO398_23655 [Methylobacterium sp.
           GXS13]
          Length = 834

 Score =  107 bits (267), Expect = 7e-25
 Identities = 51/106 (48%), Positives = 71/106 (66%)
 Frame = +2

Query: 2   AILFNDVTDRRRAEVQRDALLSIGDRLRSLDKVPDTTAAASEIIGNALNAIRAGFGRVDA 181
           A+ F +VTDR +A+ +R ALL++GDRLR L  +P+   AASEI+G  L   R GFGRVDA
Sbjct: 459 AVTFLEVTDRVQADARRVALLALGDRLRDLTAIPEMILAASEIVGTTLGVTRTGFGRVDA 518

Query: 182 AREYITIEKDWSAEGFASLAGRHLLSDFGNLDAVISGKRPIIVSDV 319
           A E + IEKDW+A G  S+ GRH  +D+GN+   +     +++ DV
Sbjct: 519 AMECVDIEKDWTAPGTVSIVGRHRFADYGNIREDLRRGEALVIEDV 564


>SDM55488.1 GAF domain-containing protein [Methylobacterium phyllostachyos]
          Length = 333

 Score =  103 bits (258), Expect = 2e-24
 Identities = 50/105 (47%), Positives = 68/105 (64%)
 Frame = +2

Query: 5   ILFNDVTDRRRAEVQRDALLSIGDRLRSLDKVPDTTAAASEIIGNALNAIRAGFGRVDAA 184
           ++F +VT R  AE +R ALL++GDRLR L    D T AA+EI+G  L A RAGFGR++  
Sbjct: 132 VIFLEVTQRVEAEARRSALLTLGDRLRDLTSTADMTRAAAEIVGRTLGATRAGFGRIEGD 191

Query: 185 REYITIEKDWSAEGFASLAGRHLLSDFGNLDAVISGKRPIIVSDV 319
            E I I  DW+A G AS+AGRH   D+G+L   +    P+++ DV
Sbjct: 192 VEAIEINPDWTAPGIASIAGRHRFDDYGDLRGSLRRGEPLVIHDV 236


>SFM65064.1 Two-component sensor histidine kinase, contains HisKA and HATPase
           domains [Methylobacterium pseudosasicola]
          Length = 829

 Score =  104 bits (260), Expect = 6e-24
 Identities = 51/105 (48%), Positives = 69/105 (65%)
 Frame = +2

Query: 5   ILFNDVTDRRRAEVQRDALLSIGDRLRSLDKVPDTTAAASEIIGNALNAIRAGFGRVDAA 184
           ++F +VT R  AE +R ALL++GDRLR L    D T AA+EI+G  L A RAGFGR++  
Sbjct: 456 VIFLEVTQRVEAEDRRSALLTLGDRLRDLTTTADMTRAAAEIVGRTLGATRAGFGRIEGD 515

Query: 185 REYITIEKDWSAEGFASLAGRHLLSDFGNLDAVISGKRPIIVSDV 319
            E I IE DW+A G AS+AGRH   D+G+L   +    P+++ DV
Sbjct: 516 VEAIEIEPDWTAPGIASIAGRHRFDDYGDLRGSLRRGEPLVIDDV 560


>WP_051976212.1 MULTISPECIES: hypothetical protein [Bacteria] SFV03946.1
           Two-component sensor histidine kinase, contains HisKA
           and HATPase domains [Methylobacterium sp. UNCCL125]
          Length = 836

 Score =  103 bits (258), Expect = 1e-23
 Identities = 48/106 (45%), Positives = 71/106 (66%)
 Frame = +2

Query: 2   AILFNDVTDRRRAEVQRDALLSIGDRLRSLDKVPDTTAAASEIIGNALNAIRAGFGRVDA 181
           A+ F +VTDR +AE +R ALLS+GDR R L + P+   AA+EI+G  L   RAG+G +D 
Sbjct: 461 AVTFLEVTDRVQAEARRTALLSLGDRFRDLTEAPEMIQAAAEIVGTTLGVTRAGYGHIDG 520

Query: 182 AREYITIEKDWSAEGFASLAGRHLLSDFGNLDAVISGKRPIIVSDV 319
             E++ IE+ W+A G AS+AGRH  +DFG++   +    P+++ DV
Sbjct: 521 DVEFVDIEEGWTAPGVASIAGRHRYADFGDIREHLRRGEPLVIEDV 566


>WP_051044712.1 MULTISPECIES: hypothetical protein [Methylobacterium] SFH26031.1
           Two-component sensor histidine kinase, contains HisKA
           and HATPase domains [Methylobacterium phyllosphaerae]
           APT32749.1 blue-light-activated histidine kinase
           [Methylobacterium phyllosphaerae]
          Length = 836

 Score =  103 bits (258), Expect = 1e-23
 Identities = 48/106 (45%), Positives = 71/106 (66%)
 Frame = +2

Query: 2   AILFNDVTDRRRAEVQRDALLSIGDRLRSLDKVPDTTAAASEIIGNALNAIRAGFGRVDA 181
           A+ F +VTDR +AE +R ALLS+GDR R L + P+   AA+EI+G  L   RAG+G +D 
Sbjct: 461 AVTFLEVTDRVQAEARRTALLSLGDRFRDLTEAPEMIQAAAEIVGTTLGVTRAGYGHIDG 520

Query: 182 AREYITIEKDWSAEGFASLAGRHLLSDFGNLDAVISGKRPIIVSDV 319
             E++ IE+ W+A G AS+AGRH  +DFG++   +    P+++ DV
Sbjct: 521 DVEFVDIEEGWTAPGVASIAGRHRYADFGDIREHLRRGEPLVIEDV 566


>AIQ92295.1 Sensor histidine kinase [Methylobacterium oryzae CBMB20]
          Length = 836

 Score =  103 bits (258), Expect = 1e-23
 Identities = 48/106 (45%), Positives = 71/106 (66%)
 Frame = +2

Query: 2   AILFNDVTDRRRAEVQRDALLSIGDRLRSLDKVPDTTAAASEIIGNALNAIRAGFGRVDA 181
           A+ F +VTDR +AE +R ALLS+GDR R L + P+   AA+EI+G  L   RAG+G +D 
Sbjct: 461 AVTFLEVTDRVQAEARRTALLSLGDRFRDLTEAPEMIQAAAEIVGTTLGVTRAGYGHIDG 520

Query: 182 AREYITIEKDWSAEGFASLAGRHLLSDFGNLDAVISGKRPIIVSDV 319
             E++ IE+ W+A G AS+AGRH  +DFG++   +    P+++ DV
Sbjct: 521 DVEFVDIEEGWTAPGVASIAGRHRYADFGDIREHLRRGEPLVIEDV 566


>WP_052300039.1 hypothetical protein [Methylobacterium populi] OAH17223.1
           hypothetical protein AX289_08985 [Methylobacterium
           populi]
          Length = 826

 Score =  102 bits (253), Expect = 5e-23
 Identities = 52/108 (48%), Positives = 71/108 (65%)
 Frame = +2

Query: 2   AILFNDVTDRRRAEVQRDALLSIGDRLRSLDKVPDTTAAASEIIGNALNAIRAGFGRVDA 181
           A++F ++T R  A+ +R+ALLS+ DRLR L  +P  T AASEI+G  L A RAGFG +  
Sbjct: 452 AVIFLEITARIEADARRNALLSLVDRLRDLTTIPAMTQAASEIVGRTLGATRAGFGLIVG 511

Query: 182 AREYITIEKDWSAEGFASLAGRHLLSDFGNLDAVISGKRPIIVSDVLS 325
             E+I IE DW+A G  S+AGRH   DFGN+ A +     ++V+DV S
Sbjct: 512 DVEFIDIELDWTAPGQVSVAGRHRYDDFGNIRAPLQRGEALVVNDVAS 559


>ACB80235.1 signal transduction histidine kinase [Methylobacterium populi
           BJ001]
          Length = 829

 Score =  102 bits (253), Expect = 5e-23
 Identities = 52/108 (48%), Positives = 71/108 (65%)
 Frame = +2

Query: 2   AILFNDVTDRRRAEVQRDALLSIGDRLRSLDKVPDTTAAASEIIGNALNAIRAGFGRVDA 181
           A++F ++T R  A+ +R+ALLS+ DRLR L  +P  T AASEI+G  L A RAGFG +  
Sbjct: 455 AVIFLEITARIEADARRNALLSLVDRLRDLTTIPAMTQAASEIVGRTLGATRAGFGLIVG 514

Query: 182 AREYITIEKDWSAEGFASLAGRHLLSDFGNLDAVISGKRPIIVSDVLS 325
             E+I IE DW+A G  S+AGRH   DFGN+ A +     ++V+DV S
Sbjct: 515 DVEFIDIELDWTAPGQVSVAGRHRYDDFGNIRAPLQRGEALVVNDVAS 562


>SDA21646.1 PAS domain S-box-containing protein [Methylobacterium sp. UNC378MF]
          Length = 1099

 Score =  101 bits (252), Expect = 7e-23
 Identities = 52/112 (46%), Positives = 75/112 (66%), Gaps = 7/112 (6%)
 Frame = +2

Query: 5    ILFNDVTDR------RRAEVQR-DALLSIGDRLRSLDKVPDTTAAASEIIGNALNAIRAG 163
            +LF +VTDR      R AE +R  ALL +GD+LR L  +P+ T AA+E++G  L+A RAG
Sbjct: 713  VLFMEVTDRIVAERAREAEERRRSALLELGDQLRDLAAIPEMTRAAAELVGRTLHASRAG 772

Query: 164  FGRVDAAREYITIEKDWSAEGFASLAGRHLLSDFGNLDAVISGKRPIIVSDV 319
            FGR+DA  E++ +E DW+A G  S+AGRH   D+G+L   +   +P++V DV
Sbjct: 773  FGRLDANAEHVVLEPDWTATGLRSIAGRHRFEDYGDLRLDLLHGQPVVVRDV 824


>WP_056242608.1 hypothetical protein [Methylobacterium sp. Leaf456] KQT56967.1
           hypothetical protein ASG52_02485 [Methylobacterium sp.
           Leaf456]
          Length = 811

 Score =  100 bits (249), Expect = 2e-22
 Identities = 45/105 (42%), Positives = 71/105 (67%)
 Frame = +2

Query: 5   ILFNDVTDRRRAEVQRDALLSIGDRLRSLDKVPDTTAAASEIIGNALNAIRAGFGRVDAA 184
           ++F ++T R +AE +R+ALLS+GDRLR +D     TAAA+EI+G  L A RA FG+++  
Sbjct: 441 VIFLEITHRVQAEARRNALLSLGDRLRDVDTSSAMTAAAAEIVGRTLGATRAAFGQIEGE 500

Query: 185 REYITIEKDWSAEGFASLAGRHLLSDFGNLDAVISGKRPIIVSDV 319
            E++T+E DW   G  S+AGRH   D+G++ A ++    +++ DV
Sbjct: 501 VEFVTVEPDWFVPGHVSIAGRHRFDDYGDIRAQLARGEALVIDDV 545


>SFP67654.1 Two-component sensor histidine kinase, contains HisKA and HATPase
           domains [Sphingomonas rubra]
          Length = 666

 Score = 98.2 bits (243), Expect = 1e-21
 Identities = 47/106 (44%), Positives = 71/106 (66%)
 Frame = +2

Query: 2   AILFNDVTDRRRAEVQRDALLSIGDRLRSLDKVPDTTAAASEIIGNALNAIRAGFGRVDA 181
           AI+F +VTDR +AE + +ALL++GDRLR    V + T  A+ I+G  L+A RAGFGR+D 
Sbjct: 298 AIIFVEVTDRLQAERRLEALLTLGDRLREASSVAEMTFTAARIVGETLSATRAGFGRIDD 357

Query: 182 AREYITIEKDWSAEGFASLAGRHLLSDFGNLDAVISGKRPIIVSDV 319
             E + IE+DW+ +G AS+ G H  +D+G+L   +    P+++ DV
Sbjct: 358 VAETMAIERDWTDKGMASIEGVHRFADYGDLLPPLLSGDPLVIDDV 403


>WP_053221135.1 hypothetical protein [Methylobacterium platani]
          Length = 1106

 Score = 98.2 bits (243), Expect = 1e-21
 Identities = 50/105 (47%), Positives = 69/105 (65%)
 Frame = +2

Query: 5    ILFNDVTDRRRAEVQRDALLSIGDRLRSLDKVPDTTAAASEIIGNALNAIRAGFGRVDAA 184
            ++F D T R  AE +R ALL++GD LR L  V   T AA+EI+G  L A RAGFGR+   
Sbjct: 733  VIFLDATARVSAENRRIALLALGDDLRDLTTVGAMTQAAAEIVGRTLGATRAGFGRIVGE 792

Query: 185  REYITIEKDWSAEGFASLAGRHLLSDFGNLDAVISGKRPIIVSDV 319
             E+I IE+DW+A G  S+AGRH   D+G+L A ++   P+++ DV
Sbjct: 793  VEFIDIEQDWTAPGQVSIAGRHRFDDYGDLRAHLARGEPLVIDDV 837


>KMO10592.1 hypothetical protein SQ03_29845 [Methylobacterium platani JCM
           14648]
          Length = 810

 Score = 97.8 bits (242), Expect = 2e-21
 Identities = 50/104 (48%), Positives = 67/104 (64%)
 Frame = +2

Query: 8   LFNDVTDRRRAEVQRDALLSIGDRLRSLDKVPDTTAAASEIIGNALNAIRAGFGRVDAAR 187
           +F DVT R  AE++R+ALL +GD LR L    D T AA+EI+G  L A RAGFGR+    
Sbjct: 438 IFLDVTQRVGAELRRNALLQLGDGLRDLTTTADMTRAAAEIVGRTLGATRAGFGRIIGDV 497

Query: 188 EYITIEKDWSAEGFASLAGRHLLSDFGNLDAVISGKRPIIVSDV 319
           E I IE DW+A G  S+AGRH    +G+L A +    P++++DV
Sbjct: 498 EEIDIEPDWTAPGQVSIAGRHQFDTYGDLRAPLRQGEPLVINDV 541


>WP_048437429.1 hypothetical protein [Methylobacterium platani]
          Length = 828

 Score = 97.8 bits (242), Expect = 2e-21
 Identities = 50/104 (48%), Positives = 67/104 (64%)
 Frame = +2

Query: 8   LFNDVTDRRRAEVQRDALLSIGDRLRSLDKVPDTTAAASEIIGNALNAIRAGFGRVDAAR 187
           +F DVT R  AE++R+ALL +GD LR L    D T AA+EI+G  L A RAGFGR+    
Sbjct: 456 IFLDVTQRVGAELRRNALLQLGDGLRDLTTTADMTRAAAEIVGRTLGATRAGFGRIIGDV 515

Query: 188 EYITIEKDWSAEGFASLAGRHLLSDFGNLDAVISGKRPIIVSDV 319
           E I IE DW+A G  S+AGRH    +G+L A +    P++++DV
Sbjct: 516 EEIDIEPDWTAPGQVSIAGRHQFDTYGDLRAPLRQGEPLVINDV 559


>WP_048434654.1 hypothetical protein [Methylobacterium platani] KMO16002.1
           hypothetical protein SQ03_15635 [Methylobacterium
           platani JCM 14648] OAS24865.1 hypothetical protein
           A5481_12280 [Methylobacterium platani]
          Length = 829

 Score = 97.4 bits (241), Expect = 2e-21
 Identities = 49/105 (46%), Positives = 69/105 (65%)
 Frame = +2

Query: 5   ILFNDVTDRRRAEVQRDALLSIGDRLRSLDKVPDTTAAASEIIGNALNAIRAGFGRVDAA 184
           I+F +VT R  A+ +R ALLS+GDRLR L  V + T AA+EI+G  L A RAGFGR++  
Sbjct: 456 IIFLEVTARVEADARRLALLSLGDRLRDLATVGEMTRAAAEIVGRTLGATRAGFGRIEGD 515

Query: 185 REYITIEKDWSAEGFASLAGRHLLSDFGNLDAVISGKRPIIVSDV 319
            E I +E DW+A G  S+AGRH   D+G++ A +     +++ DV
Sbjct: 516 VEAIEVEPDWTAPGIPSIAGRHRFDDYGDIRAHLRRGDALVIDDV 560


>SDM53880.1 PAS domain S-box-containing protein [Methylobacterium
           phyllostachyos]
          Length = 957

 Score = 94.4 bits (233), Expect = 3e-20
 Identities = 47/102 (46%), Positives = 68/102 (66%), Gaps = 1/102 (0%)
 Frame = +2

Query: 17  DVTDRRRAEVQRDALLSIGDRLRSLDKVPDTTAAASEIIGNALNAIRAGFGRVDAAREYI 196
           D+TDRR A   + ALL++GDRLR L  VP+ T AA+EI+G AL   R  FG +DA    +
Sbjct: 582 DITDRREAAAHQAALLALGDRLRDLPAVPEMTRAAAEIVGRALGVSRVSFGLIDATNGVL 641

Query: 197 TIEKDWSAEGFASLAGRHLLSDFGN-LDAVISGKRPIIVSDV 319
            +E DW+ +G  S+AG H  +++G+ LD ++ G+ P+IV DV
Sbjct: 642 HVEPDWTMQGHTSIAGVHRFAEYGDILDGLLRGE-PLIVPDV 682


>WP_064503953.1 hypothetical protein [Methylobacterium platani] OAS25109.1
           hypothetical protein A5481_11495 [Methylobacterium
           platani]
          Length = 828

 Score = 94.0 bits (232), Expect = 4e-20
 Identities = 48/104 (46%), Positives = 65/104 (62%)
 Frame = +2

Query: 8   LFNDVTDRRRAEVQRDALLSIGDRLRSLDKVPDTTAAASEIIGNALNAIRAGFGRVDAAR 187
           +F DVT R  AE++R+ALL +GD LR L    D T AA+EI+G  L A RAGFGR+    
Sbjct: 456 IFLDVTQRVGAELRRNALLQLGDGLRDLTTTADMTRAAAEIVGRTLGATRAGFGRIIGDV 515

Query: 188 EYITIEKDWSAEGFASLAGRHLLSDFGNLDAVISGKRPIIVSDV 319
           E I +E DW+A G  S+AGRH    +G+L   +    P+ ++DV
Sbjct: 516 EEIDVEPDWTAPGQVSIAGRHRFDAYGDLRTPLRQGEPLAINDV 559