BLASTX nr result

ID: Glycyrrhiza35_contig00031888 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza35_contig00031888
         (223 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GAU19192.1 hypothetical protein TSUD_198740 [Trifolium subterran...    79   2e-16
YP_009232109.1 ribosomal protein L2 (chloroplast) [Lavandula ang...    70   3e-12

>GAU19192.1 hypothetical protein TSUD_198740 [Trifolium subterraneum]
          Length = 210

 Score = 79.0 bits (193), Expect = 2e-16
 Identities = 37/38 (97%), Positives = 37/38 (97%)
 Frame = -1

Query: 118 RGRAGSEGSFSRQQAPLFEASPHQRKPLHASLLYRVPC 5
           RGRAGSEGSFSRQQAPLFEASPHQRKPLHASLLYRV C
Sbjct: 107 RGRAGSEGSFSRQQAPLFEASPHQRKPLHASLLYRVAC 144


>YP_009232109.1 ribosomal protein L2 (chloroplast) [Lavandula angustifolia]
           AMA20327.1 ribosomal protein L2 (chloroplast) [Lavandula
           angustifolia]
          Length = 567

 Score = 69.7 bits (169), Expect = 3e-12
 Identities = 37/48 (77%), Positives = 41/48 (85%), Gaps = 3/48 (6%)
 Frame = -1

Query: 208 FLEL---GEAKLQTKRLGCSLH*FDFT*LKIKDRGRAGSEGSFSRQQA 74
           FL+L   G+A  +TKRLGCSLH FDFT LKIKDRGRAGSEGSFSRQ+A
Sbjct: 378 FLKLKLPGKASNKTKRLGCSLHCFDFTLLKIKDRGRAGSEGSFSRQRA 425


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