BLASTX nr result

ID: Glycyrrhiza35_contig00030276 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza35_contig00030276
         (347 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GAU22159.1 hypothetical protein TSUD_251870 [Trifolium subterran...    82   5e-16
XP_004491250.1 PREDICTED: pentatricopeptide repeat-containing pr...    77   4e-14
XP_003617310.2 PPR containing plant-like protein [Medicago trunc...    77   5e-14
XP_019461058.1 PREDICTED: pentatricopeptide repeat-containing pr...    64   1e-09

>GAU22159.1 hypothetical protein TSUD_251870 [Trifolium subterraneum]
          Length = 350

 Score = 81.6 bits (200), Expect = 5e-16
 Identities = 42/66 (63%), Positives = 49/66 (74%), Gaps = 2/66 (3%)
 Frame = +1

Query: 91  PCSLPHAFLVDKLLFRLKQGDLSSLRNHLLHCPDPS--SLLPQLLHRCRNHPSQLNHLIH 264
           P SLP AFL+DKLLFRLKQ D SSLRNHLL     S  +L+PQLL +C N+P  L +LI 
Sbjct: 49  PSSLPDAFLIDKLLFRLKQNDFSSLRNHLLRSNSSSTLTLIPQLLQKCHNYPLLLPNLIQ 108

Query: 265 SIASTC 282
           +IASTC
Sbjct: 109 TIASTC 114


>XP_004491250.1 PREDICTED: pentatricopeptide repeat-containing protein At5g01110
           [Cicer arietinum] XP_004491251.1 PREDICTED:
           pentatricopeptide repeat-containing protein At5g01110
           [Cicer arietinum] XP_004491254.1 PREDICTED:
           pentatricopeptide repeat-containing protein At5g01110
           [Cicer arietinum] XP_012568620.1 PREDICTED:
           pentatricopeptide repeat-containing protein At5g01110
           [Cicer arietinum]
          Length = 707

 Score = 77.0 bits (188), Expect = 4e-14
 Identities = 39/63 (61%), Positives = 49/63 (77%)
 Frame = +1

Query: 91  PCSLPHAFLVDKLLFRLKQGDLSSLRNHLLHCPDPSSLLPQLLHRCRNHPSQLNHLIHSI 270
           P SLP AFL+DKLLFRLKQGD SS+RN+LL   + S+L+PQLLH+C   P  L +LI ++
Sbjct: 30  PPSLPDAFLIDKLLFRLKQGDFSSVRNYLLR-SNSSTLIPQLLHKCHQFPLLLPNLIQTV 88

Query: 271 AST 279
           AST
Sbjct: 89  AST 91


>XP_003617310.2 PPR containing plant-like protein [Medicago truncatula] AET00269.2
           PPR containing plant-like protein [Medicago truncatula]
          Length = 730

 Score = 76.6 bits (187), Expect = 5e-14
 Identities = 48/97 (49%), Positives = 58/97 (59%), Gaps = 4/97 (4%)
 Frame = +1

Query: 1   LTSHT--FSSLPTTVADPPXXXXXXXXXXXXXPCSLPHAFLVDKLLFRLKQGDLSSLRNH 174
           L SHT  FSSLP +                  P SLP+A L+DKLLFRLKQ D SSLR H
Sbjct: 31  LISHTPSFSSLPLS------------------PSSLPNALLIDKLLFRLKQNDFSSLRTH 72

Query: 175 LLHCPD--PSSLLPQLLHRCRNHPSQLNHLIHSIAST 279
           LLH       +L+PQLL +C+N+P  L +LI +IAST
Sbjct: 73  LLHSNSTLTLTLIPQLLQKCQNYPLLLPNLIQTIAST 109


>XP_019461058.1 PREDICTED: pentatricopeptide repeat-containing protein At5g01110
           [Lupinus angustifolius] XP_019461060.1 PREDICTED:
           pentatricopeptide repeat-containing protein At5g01110
           [Lupinus angustifolius]
          Length = 733

 Score = 64.3 bits (155), Expect = 1e-09
 Identities = 38/92 (41%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
 Frame = +1

Query: 10  HTFSSLPTTVADPPXXXXXXXXXXXXXPCSLPHAFLVDKLLFRLKQGDLSSLRNHLLHC- 186
           H+FSSLP    +P                SL   FLV+K++F L Q + +SLRN  L   
Sbjct: 26  HSFSSLPLHNPNPNPNPNQNHNI------SLSQEFLVEKVIFALNQNNPTSLRNLFLRST 79

Query: 187 PDPSSLLPQLLHRCRNHPSQLNHLIHSIASTC 282
           PDPSSL+ Q+LHRCR  P   +  + S++STC
Sbjct: 80  PDPSSLVLQILHRCRQDPILTHRFVQSLSSTC 111


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