BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza35_contig00029796
         (278 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ERF82171.1 asparagine synthase (glutamine-hydrolysing) [Bradyrhi...   133   1e-35
ERF82170.1 type IV secretion system protein VirD4 [Bradyrhizobiu...    79   3e-15
OCX25986.1 hypothetical protein QU42_36535 (plasmid) [Bradyrhizo...    75   5e-14
WP_027582197.1 hypothetical protein [Bradyrhizobium sp. Ai1a-2]        75   5e-14
WP_050995357.1 hypothetical protein [Bradyrhizobium liaoningense]      71   9e-13
WP_038381253.1 hypothetical protein [Bradyrhizobium elkanii]           72   1e-12
OCX25987.1 type IV secretion system protein VirD4 (plasmid) [Bra...    71   2e-12
WP_027582196.1 type IV secretory pathway protein VirD4 [Bradyrhi...    70   6e-12
WP_029084479.1 hypothetical protein [Bradyrhizobium sp. th.b2]         69   1e-11
WP_024582769.1 hypothetical protein [Bradyrhizobium sp. OHSU_III]      66   9e-11
WP_009859417.1 hypothetical protein [Bradyrhizobium sp. WSM1253]...    65   3e-10
WP_024582768.1 type IV secretory pathway protein VirD4 [Bradyrhi...    64   5e-10
CUT16489.1 IncQ plasmid conjugative transfer DNA primase TraO pT...    63   2e-09
WP_028133091.1 type IV secretory pathway protein VirD4 [Bradyrhi...    63   2e-09
WP_038975163.1 type IV secretory pathway protein VirD4 [Bradyrhi...    62   2e-09
WP_029084480.1 type IV secretory pathway protein VirD4 [Bradyrhi...    62   2e-09
WP_074448533.1 type IV secretion system protein VirD4 [Bradyrhiz...    62   3e-09
WP_036029491.1 type IV secretory pathway protein VirD4 [Bradyrhi...    62   3e-09
WP_028143671.1 hypothetical protein [Bradyrhizobium japonicum]         61   6e-09
WP_028143672.1 type IV secretory pathway protein VirD4 [Bradyrhi...    61   6e-09

>ERF82171.1 asparagine synthase (glutamine-hydrolysing) [Bradyrhizobium sp.
           DFCI-1]
          Length = 393

 Score =  133 bits (335), Expect = 1e-35
 Identities = 64/64 (100%), Positives = 64/64 (100%)
 Frame = -1

Query: 194 MDGNMNGTLDGGEDFSLKRQDRAGRDPNADKSGEGRATTSDKSPSAMVGGDALPDRIRRK 15
           MDGNMNGTLDGGEDFSLKRQDRAGRDPNADKSGEGRATTSDKSPSAMVGGDALPDRIRRK
Sbjct: 1   MDGNMNGTLDGGEDFSLKRQDRAGRDPNADKSGEGRATTSDKSPSAMVGGDALPDRIRRK 60

Query: 14  YYVV 3
           YYVV
Sbjct: 61  YYVV 64


>ERF82170.1 type IV secretion system protein VirD4 [Bradyrhizobium sp. DFCI-1]
          Length = 648

 Score = 79.3 bits (194), Expect = 3e-15
 Identities = 36/36 (100%), Positives = 36/36 (100%)
 Frame = -3

Query: 276 EDDMKAWTLNYIDAQALPLARRPSRKQNGRQHERHA 169
           EDDMKAWTLNYIDAQALPLARRPSRKQNGRQHERHA
Sbjct: 613 EDDMKAWTLNYIDAQALPLARRPSRKQNGRQHERHA 648


>OCX25986.1 hypothetical protein QU42_36535 (plasmid) [Bradyrhizobium sp.
           UASWS1016]
          Length = 392

 Score = 75.5 bits (184), Expect = 5e-14
 Identities = 42/63 (66%), Positives = 44/63 (69%), Gaps = 3/63 (4%)
 Frame = -1

Query: 182 MNGTLDGGEDFSLKRQDRAGRDPNADKSGEGRATTS---DKSPSAMVGGDALPDRIRRKY 12
           MN T D   DFSLKRQDR GR P  DKSG+  AT S   DKS SA V G+ALPDRI RKY
Sbjct: 1   MNATHDDSGDFSLKRQDRTGRYPGTDKSGKDFATKSAPTDKSSSATVDGNALPDRILRKY 60

Query: 11  YVV 3
           YVV
Sbjct: 61  YVV 63


>WP_027582197.1 hypothetical protein [Bradyrhizobium sp. Ai1a-2]
          Length = 393

 Score = 75.5 bits (184), Expect = 5e-14
 Identities = 39/63 (61%), Positives = 43/63 (68%), Gaps = 3/63 (4%)
 Frame = -1

Query: 182 MNGTLDGGEDFSLKRQDRAGRDPNADKSGE---GRATTSDKSPSAMVGGDALPDRIRRKY 12
           MN   D  EDFSLKRQDR GR+P  DK  E    ++  +DKSPSA V   ALPDRIRRKY
Sbjct: 1   MNAMRDDSEDFSLKRQDRTGREPGPDKPSEDSTSKSAPTDKSPSATVDDKALPDRIRRKY 60

Query: 11  YVV 3
           YVV
Sbjct: 61  YVV 63


>WP_050995357.1 hypothetical protein [Bradyrhizobium liaoningense]
          Length = 288

 Score = 71.2 bits (173), Expect = 9e-13
 Identities = 39/63 (61%), Positives = 43/63 (68%), Gaps = 3/63 (4%)
 Frame = -1

Query: 182 MNGTLDGGEDFSLKRQDRAGRDPNADKSGEGRATTS---DKSPSAMVGGDALPDRIRRKY 12
           M  T D GE+FS++RQ R GRD N D+  E  ATTS   DKSPSA    DA PDRIRRKY
Sbjct: 1   MKHTRDDGENFSIERQYRTGRDSNLDERREDTATTSAQPDKSPSAATLDDAFPDRIRRKY 60

Query: 11  YVV 3
           YVV
Sbjct: 61  YVV 63


>WP_038381253.1 hypothetical protein [Bradyrhizobium elkanii]
          Length = 389

 Score = 71.6 bits (174), Expect = 1e-12
 Identities = 39/63 (61%), Positives = 43/63 (68%), Gaps = 3/63 (4%)
 Frame = -1

Query: 182 MNGTLDGGEDFSLKRQDRAGRDPNADKSGEGRATTS---DKSPSAMVGGDALPDRIRRKY 12
           MN T D  E+FS++RQ R GRD N D+  E  ATTS   DKSPSA    DA PDRIRRKY
Sbjct: 1   MNDTRDDSENFSIERQYRTGRDSNLDERREDTATTSAQTDKSPSAATLDDAFPDRIRRKY 60

Query: 11  YVV 3
           YVV
Sbjct: 61  YVV 63


>OCX25987.1 type IV secretion system protein VirD4 (plasmid) [Bradyrhizobium
           sp. UASWS1016]
          Length = 648

 Score = 70.9 bits (172), Expect = 2e-12
 Identities = 32/36 (88%), Positives = 34/36 (94%)
 Frame = -3

Query: 276 EDDMKAWTLNYIDAQALPLARRPSRKQNGRQHERHA 169
           EDDMKAWTLNYIDAQA+P ARR SRKQNG+QHERHA
Sbjct: 613 EDDMKAWTLNYIDAQAIPPARRGSRKQNGQQHERHA 648


>WP_027582196.1 type IV secretory pathway protein VirD4 [Bradyrhizobium sp. Ai1a-2]
          Length = 648

 Score = 69.7 bits (169), Expect = 6e-12
 Identities = 32/36 (88%), Positives = 33/36 (91%)
 Frame = -3

Query: 276 EDDMKAWTLNYIDAQALPLARRPSRKQNGRQHERHA 169
           ED MKAWTLNYIDAQA+P ARRPSRKQ GRQHERHA
Sbjct: 613 EDAMKAWTLNYIDAQAIPPARRPSRKQYGRQHERHA 648


>WP_029084479.1 hypothetical protein [Bradyrhizobium sp. th.b2]
          Length = 389

 Score = 68.9 bits (167), Expect = 1e-11
 Identities = 33/60 (55%), Positives = 42/60 (70%)
 Frame = -1

Query: 182 MNGTLDGGEDFSLKRQDRAGRDPNADKSGEGRATTSDKSPSAMVGGDALPDRIRRKYYVV 3
           MNG  +  EDFSL +QDRAGRDP   +  E ++ ++DKS   MV   ALPDRIRRKY+V+
Sbjct: 1   MNGKREDSEDFSLVQQDRAGRDPRRGEDLEAKSVSADKSSPQMVDDKALPDRIRRKYHVI 60


>WP_024582769.1 hypothetical protein [Bradyrhizobium sp. OHSU_III]
          Length = 389

 Score = 66.2 bits (160), Expect = 9e-11
 Identities = 37/64 (57%), Positives = 42/64 (65%), Gaps = 4/64 (6%)
 Frame = -1

Query: 182 MNGTLDGGEDFSLKRQDRAGRDPNADKSGEG----RATTSDKSPSAMVGGDALPDRIRRK 15
           MNGT D  EDFSL+RQ RAG D N DK G+G    ++  + K   AMV  D  PDRIRRK
Sbjct: 1   MNGTRDDSEDFSLERQGRAG-DSNRDKGGDGDSAAKSAPTIKPSPAMVQDDVFPDRIRRK 59

Query: 14  YYVV 3
           YYVV
Sbjct: 60  YYVV 63


>WP_009859417.1 hypothetical protein [Bradyrhizobium sp. WSM1253] EIG63807.1
           hypothetical protein Bra1253DRAFT_00347 [Bradyrhizobium
           sp. WSM1253]
          Length = 390

 Score = 64.7 bits (156), Expect = 3e-10
 Identities = 31/63 (49%), Positives = 45/63 (71%), Gaps = 3/63 (4%)
 Frame = -1

Query: 182 MNGTLDGGEDFSLKRQDRAGRDPNADKSG---EGRATTSDKSPSAMVGGDALPDRIRRKY 12
           MN   D GEDFSL+RQDR GRDP  ++ G   + ++ ++ +S +A+V  +ALP+RI RKY
Sbjct: 1   MNDKRDNGEDFSLERQDRTGRDPGRNEPGDQAQAKSKSAARSSAAIVDDNALPERISRKY 60

Query: 11  YVV 3
           YV+
Sbjct: 61  YVI 63


>WP_024582768.1 type IV secretory pathway protein VirD4 [Bradyrhizobium sp.
           OHSU_III]
          Length = 648

 Score = 64.3 bits (155), Expect = 5e-10
 Identities = 29/36 (80%), Positives = 31/36 (86%)
 Frame = -3

Query: 276 EDDMKAWTLNYIDAQALPLARRPSRKQNGRQHERHA 169
           EDDMKAWTLNYIDAQA+P ARR  RKQ+  QHERHA
Sbjct: 613 EDDMKAWTLNYIDAQAIPPARRSGRKQSREQHERHA 648


>CUT16489.1 IncQ plasmid conjugative transfer DNA primase TraO pTi TraA homolog
           CDS (plasmid) [Bradyrhizobium sp.]
          Length = 390

 Score = 62.8 bits (151), Expect = 2e-09
 Identities = 31/63 (49%), Positives = 44/63 (69%), Gaps = 3/63 (4%)
 Frame = -1

Query: 182 MNGTLDGGEDFSLKRQDRAGRDPNADKSG---EGRATTSDKSPSAMVGGDALPDRIRRKY 12
           MN   D GEDFSL+RQDR GRD   ++ G   E ++ ++ +S +A+V  +ALP+RI RKY
Sbjct: 1   MNDKRDNGEDFSLERQDRTGRDSGRNEPGDQAEAKSKSAARSSAAIVDDNALPERISRKY 60

Query: 11  YVV 3
           YV+
Sbjct: 61  YVI 63


>WP_028133091.1 type IV secretory pathway protein VirD4 [Bradyrhizobium japonicum]
          Length = 648

 Score = 62.8 bits (151), Expect = 2e-09
 Identities = 27/35 (77%), Positives = 31/35 (88%)
 Frame = -3

Query: 276 EDDMKAWTLNYIDAQALPLARRPSRKQNGRQHERH 172
           EDDMKAW LNYIDAQA+P ARRP RK++ +QHERH
Sbjct: 613 EDDMKAWVLNYIDAQAIPPARRPGRKRSEQQHERH 647


>WP_038975163.1 type IV secretory pathway protein VirD4 [Bradyrhizobium sp. CCBAU
           15615]
          Length = 648

 Score = 62.4 bits (150), Expect = 2e-09
 Identities = 28/36 (77%), Positives = 30/36 (83%)
 Frame = -3

Query: 276 EDDMKAWTLNYIDAQALPLARRPSRKQNGRQHERHA 169
           EDDMKAWTLNYIDAQ +P ARR  RK+N  QHERHA
Sbjct: 613 EDDMKAWTLNYIDAQTIPPARRSGRKKNEPQHERHA 648


>WP_029084480.1 type IV secretory pathway protein VirD4 [Bradyrhizobium sp. th.b2]
          Length = 648

 Score = 62.4 bits (150), Expect = 2e-09
 Identities = 28/36 (77%), Positives = 30/36 (83%)
 Frame = -3

Query: 276 EDDMKAWTLNYIDAQALPLARRPSRKQNGRQHERHA 169
           EDDMKAWTL YID QA+P ARR  RKQNG+QHER A
Sbjct: 613 EDDMKAWTLKYIDNQAIPRARRSGRKQNGQQHERQA 648


>WP_074448533.1 type IV secretion system protein VirD4 [Bradyrhizobium
           yuanmingense] SCB52539.1 type IV secretion system
           protein VirD4 [Bradyrhizobium yuanmingense]
          Length = 648

 Score = 62.0 bits (149), Expect = 3e-09
 Identities = 27/35 (77%), Positives = 30/35 (85%)
 Frame = -3

Query: 276 EDDMKAWTLNYIDAQALPLARRPSRKQNGRQHERH 172
           EDDMKAW LNYIDAQA+P ARRP RK+N +QHE H
Sbjct: 613 EDDMKAWVLNYIDAQAIPPARRPGRKRNEQQHEPH 647


>WP_036029491.1 type IV secretory pathway protein VirD4 [Bradyrhizobium
           yuanmingense]
          Length = 648

 Score = 62.0 bits (149), Expect = 3e-09
 Identities = 27/35 (77%), Positives = 30/35 (85%)
 Frame = -3

Query: 276 EDDMKAWTLNYIDAQALPLARRPSRKQNGRQHERH 172
           EDDMKAW LNYIDAQA+P ARRP RK+N +QHE H
Sbjct: 613 EDDMKAWVLNYIDAQAIPPARRPGRKRNEQQHEPH 647


>WP_028143671.1 hypothetical protein [Bradyrhizobium japonicum]
          Length = 390

 Score = 61.2 bits (147), Expect = 6e-09
 Identities = 31/63 (49%), Positives = 41/63 (65%), Gaps = 3/63 (4%)
 Frame = -1

Query: 182 MNGTLDGGEDFSLKRQDRAGRDP---NADKSGEGRATTSDKSPSAMVGGDALPDRIRRKY 12
           MN T D  EDFSL+RQDR GR P     D   E ++ ++ +S +A+V   ALP+RI RKY
Sbjct: 1   MNHTRDNSEDFSLERQDRTGRGPGRNEPDDQAEAKSKSAARSSAAIVDDKALPERISRKY 60

Query: 11  YVV 3
           YV+
Sbjct: 61  YVI 63


>WP_028143672.1 type IV secretory pathway protein VirD4 [Bradyrhizobium japonicum]
          Length = 648

 Score = 61.2 bits (147), Expect = 6e-09
 Identities = 26/36 (72%), Positives = 32/36 (88%)
 Frame = -3

Query: 276 EDDMKAWTLNYIDAQALPLARRPSRKQNGRQHERHA 169
           E+++KAWTLNYIDAQA+P A+R  RKQNG+QHE HA
Sbjct: 613 EEELKAWTLNYIDAQAIPPAQRSGRKQNGQQHEPHA 648