BLASTX nr result
ID: Glycyrrhiza35_contig00029149
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza35_contig00029149
(280 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ACE88986.1 RNA polymerase subunit beta, partial [Afifella pfenni... 176 4e-52
ACE88985.1 RNA polymerase subunit beta, partial [Rhodobium orien... 176 4e-52
ACE88987.1 RNA polymerase subunit beta, partial [Rhodobium gokar... 176 5e-52
ACE88983.1 RNA polymerase subunit beta, partial [Rhodopseudomona... 176 6e-52
ACE88982.1 RNA polymerase subunit beta, partial [Afifella marina... 176 6e-52
ACZ54135.1 RNA polymerase beta-subunit, partial [uncultured Bart... 176 8e-52
ACZ54133.1 RNA polymerase beta-subunit, partial [uncultured Bart... 176 1e-51
ACC85601.1 DNA-dependent RNA polymerase beta chain, partial [Bru... 175 3e-51
ACZ54134.1 RNA polymerase beta-subunit, partial [uncultured Bart... 174 3e-51
OJW60334.1 DNA-directed RNA polymerase subunit beta, partial [Af... 180 6e-51
WP_011441177.1 DNA-directed RNA polymerase subunit beta [Rhodops... 180 7e-51
WP_072387354.1 DNA-directed RNA polymerase subunit beta [Hyphomi... 180 7e-51
ODT30966.1 DNA-directed RNA polymerase subunit beta [Hyphomicrob... 180 7e-51
WP_062314883.1 DNA-directed RNA polymerase subunit beta [Bradyrh... 180 7e-51
AAU26030.1 RNA polymerase beta subunit [Afipia sp. SP17] 180 7e-51
WP_019196571.1 MULTISPECIES: DNA-directed RNA polymerase subunit... 180 7e-51
WP_002712314.1 DNA-directed RNA polymerase subunit beta [Afipia ... 180 7e-51
WP_046826844.1 DNA-directed RNA polymerase subunit beta [Afipia ... 180 7e-51
AAP75726.1 RNA polymerase beta subunit [Afipia massiliensis 34633] 180 7e-51
SHL75782.1 DNA-directed RNA polymerase subunit beta [Bradyrhizob... 180 7e-51
>ACE88986.1 RNA polymerase subunit beta, partial [Afifella pfennigii DSM 17143]
Length = 391
Score = 176 bits (446), Expect = 4e-52
Identities = 90/92 (97%), Positives = 92/92 (100%)
Frame = +3
Query: 3 EIDDIDHLGNRRVRSVGELMENQYRIGLLRMERAIKERMSSVDIDTVMPQDLINAKPAAA 182
EIDDID+LGNRRVRSVGELMENQYRIGLLRMERAIKERMSSV+IDTVMPQDLINAKPAAA
Sbjct: 293 EIDDIDNLGNRRVRSVGELMENQYRIGLLRMERAIKERMSSVEIDTVMPQDLINAKPAAA 352
Query: 183 AVREFFGSSQLSQFMDQTNPLSEITHKRRLSA 278
AVREFFGSSQLSQFMDQTNPLSEITHKRRLSA
Sbjct: 353 AVREFFGSSQLSQFMDQTNPLSEITHKRRLSA 384
>ACE88985.1 RNA polymerase subunit beta, partial [Rhodobium orientis]
Length = 393
Score = 176 bits (446), Expect = 4e-52
Identities = 90/92 (97%), Positives = 92/92 (100%)
Frame = +3
Query: 3 EIDDIDHLGNRRVRSVGELMENQYRIGLLRMERAIKERMSSVDIDTVMPQDLINAKPAAA 182
EIDDID+LGNRRVRSVGELMENQYRIGLLRMERAIKERMSSV+IDTVMPQDLINAKPAAA
Sbjct: 295 EIDDIDNLGNRRVRSVGELMENQYRIGLLRMERAIKERMSSVEIDTVMPQDLINAKPAAA 354
Query: 183 AVREFFGSSQLSQFMDQTNPLSEITHKRRLSA 278
AVREFFGSSQLSQFMDQTNPLSEITHKRRLSA
Sbjct: 355 AVREFFGSSQLSQFMDQTNPLSEITHKRRLSA 386
>ACE88987.1 RNA polymerase subunit beta, partial [Rhodobium gokarnense]
Length = 404
Score = 176 bits (446), Expect = 5e-52
Identities = 90/92 (97%), Positives = 92/92 (100%)
Frame = +3
Query: 3 EIDDIDHLGNRRVRSVGELMENQYRIGLLRMERAIKERMSSVDIDTVMPQDLINAKPAAA 182
EIDDID+LGNRRVRSVGELMENQYRIGLLRMERAIKERMSSV+IDTVMPQDLINAKPAAA
Sbjct: 292 EIDDIDNLGNRRVRSVGELMENQYRIGLLRMERAIKERMSSVEIDTVMPQDLINAKPAAA 351
Query: 183 AVREFFGSSQLSQFMDQTNPLSEITHKRRLSA 278
AVREFFGSSQLSQFMDQTNPLSEITHKRRLSA
Sbjct: 352 AVREFFGSSQLSQFMDQTNPLSEITHKRRLSA 383
>ACE88983.1 RNA polymerase subunit beta, partial [Rhodopseudomonas julia]
Length = 393
Score = 176 bits (445), Expect = 6e-52
Identities = 89/92 (96%), Positives = 92/92 (100%)
Frame = +3
Query: 3 EIDDIDHLGNRRVRSVGELMENQYRIGLLRMERAIKERMSSVDIDTVMPQDLINAKPAAA 182
EIDDID+LGNRRVRSVGELMENQYR+GLLRMERAIKERMSSV+IDTVMPQDLINAKPAAA
Sbjct: 295 EIDDIDNLGNRRVRSVGELMENQYRVGLLRMERAIKERMSSVEIDTVMPQDLINAKPAAA 354
Query: 183 AVREFFGSSQLSQFMDQTNPLSEITHKRRLSA 278
AVREFFGSSQLSQFMDQTNPLSEITHKRRLSA
Sbjct: 355 AVREFFGSSQLSQFMDQTNPLSEITHKRRLSA 386
>ACE88982.1 RNA polymerase subunit beta, partial [Afifella marina] ACE88984.1
RNA polymerase subunit beta, partial [Afifella marina
DSM 2698]
Length = 393
Score = 176 bits (445), Expect = 6e-52
Identities = 89/92 (96%), Positives = 92/92 (100%)
Frame = +3
Query: 3 EIDDIDHLGNRRVRSVGELMENQYRIGLLRMERAIKERMSSVDIDTVMPQDLINAKPAAA 182
EIDDID+LGNRRVRSVGELMENQYR+GLLRMERAIKERMSSV+IDTVMPQDLINAKPAAA
Sbjct: 295 EIDDIDNLGNRRVRSVGELMENQYRVGLLRMERAIKERMSSVEIDTVMPQDLINAKPAAA 354
Query: 183 AVREFFGSSQLSQFMDQTNPLSEITHKRRLSA 278
AVREFFGSSQLSQFMDQTNPLSEITHKRRLSA
Sbjct: 355 AVREFFGSSQLSQFMDQTNPLSEITHKRRLSA 386
>ACZ54135.1 RNA polymerase beta-subunit, partial [uncultured Bartonella sp.]
Length = 423
Score = 176 bits (446), Expect = 8e-52
Identities = 90/92 (97%), Positives = 92/92 (100%)
Frame = +3
Query: 3 EIDDIDHLGNRRVRSVGELMENQYRIGLLRMERAIKERMSSVDIDTVMPQDLINAKPAAA 182
EIDDID+LGNRRVRSVGELMENQYRIGLLRMERAIKERMSSV+IDTVMPQDLINAKPAAA
Sbjct: 64 EIDDIDNLGNRRVRSVGELMENQYRIGLLRMERAIKERMSSVEIDTVMPQDLINAKPAAA 123
Query: 183 AVREFFGSSQLSQFMDQTNPLSEITHKRRLSA 278
AVREFFGSSQLSQFMDQTNPLSEITHKRRLSA
Sbjct: 124 AVREFFGSSQLSQFMDQTNPLSEITHKRRLSA 155
>ACZ54133.1 RNA polymerase beta-subunit, partial [uncultured Bartonella sp.]
Length = 436
Score = 176 bits (446), Expect = 1e-51
Identities = 90/92 (97%), Positives = 92/92 (100%)
Frame = +3
Query: 3 EIDDIDHLGNRRVRSVGELMENQYRIGLLRMERAIKERMSSVDIDTVMPQDLINAKPAAA 182
EIDDID+LGNRRVRSVGELMENQYRIGLLRMERAIKERMSSV+IDTVMPQDLINAKPAAA
Sbjct: 116 EIDDIDNLGNRRVRSVGELMENQYRIGLLRMERAIKERMSSVEIDTVMPQDLINAKPAAA 175
Query: 183 AVREFFGSSQLSQFMDQTNPLSEITHKRRLSA 278
AVREFFGSSQLSQFMDQTNPLSEITHKRRLSA
Sbjct: 176 AVREFFGSSQLSQFMDQTNPLSEITHKRRLSA 207
>ACC85601.1 DNA-dependent RNA polymerase beta chain, partial [Brucella abortus
bv. 3]
Length = 457
Score = 175 bits (444), Expect = 3e-51
Identities = 88/92 (95%), Positives = 92/92 (100%)
Frame = +3
Query: 3 EIDDIDHLGNRRVRSVGELMENQYRIGLLRMERAIKERMSSVDIDTVMPQDLINAKPAAA 182
EIDDID+LGNRRVRSVGELMENQYR+GLLRMERAIKERMSS++IDTVMPQDLINAKPAAA
Sbjct: 326 EIDDIDNLGNRRVRSVGELMENQYRVGLLRMERAIKERMSSIEIDTVMPQDLINAKPAAA 385
Query: 183 AVREFFGSSQLSQFMDQTNPLSEITHKRRLSA 278
AVREFFGSSQLSQFMDQTNPLSEITHKRRLSA
Sbjct: 386 AVREFFGSSQLSQFMDQTNPLSEITHKRRLSA 417
>ACZ54134.1 RNA polymerase beta-subunit, partial [uncultured Bartonella sp.]
Length = 425
Score = 174 bits (442), Expect = 3e-51
Identities = 89/92 (96%), Positives = 91/92 (98%)
Frame = +3
Query: 3 EIDDIDHLGNRRVRSVGELMENQYRIGLLRMERAIKERMSSVDIDTVMPQDLINAKPAAA 182
EIDDID+LGNRRVRSVGELMENQYRIGLLRMERAIKERMSSV+IDTVMPQDLINAKPAAA
Sbjct: 115 EIDDIDNLGNRRVRSVGELMENQYRIGLLRMERAIKERMSSVEIDTVMPQDLINAKPAAA 174
Query: 183 AVREFFGSSQLSQFMDQTNPLSEITHKRRLSA 278
AVREFFGSSQLSQFMDQTNPLSEITHKRR SA
Sbjct: 175 AVREFFGSSQLSQFMDQTNPLSEITHKRRFSA 206
>OJW60334.1 DNA-directed RNA polymerase subunit beta, partial [Afipia sp.
64-13]
Length = 828
Score = 180 bits (456), Expect = 6e-51
Identities = 91/92 (98%), Positives = 92/92 (100%)
Frame = +3
Query: 3 EIDDIDHLGNRRVRSVGELMENQYRIGLLRMERAIKERMSSVDIDTVMPQDLINAKPAAA 182
EIDDIDHLGNRRVRSVGELMENQYR+GLLRMERAIKERMSSVDIDTVMPQDLINAKPAAA
Sbjct: 450 EIDDIDHLGNRRVRSVGELMENQYRVGLLRMERAIKERMSSVDIDTVMPQDLINAKPAAA 509
Query: 183 AVREFFGSSQLSQFMDQTNPLSEITHKRRLSA 278
AVREFFGSSQLSQFMDQTNPLSEITHKRRLSA
Sbjct: 510 AVREFFGSSQLSQFMDQTNPLSEITHKRRLSA 541
>WP_011441177.1 DNA-directed RNA polymerase subunit beta [Rhodopseudomonas
palustris] Q2IXS0.1 RecName: Full=DNA-directed RNA
polymerase subunit beta; Short=RNAP subunit beta;
AltName: Full=RNA polymerase subunit beta; AltName:
Full=Transcriptase subunit beta ABD06990.1 DNA-directed
RNA polymerase, beta subunit [Rhodopseudomonas palustris
HaA2]
Length = 1390
Score = 180 bits (457), Expect = 7e-51
Identities = 92/92 (100%), Positives = 92/92 (100%)
Frame = +3
Query: 3 EIDDIDHLGNRRVRSVGELMENQYRIGLLRMERAIKERMSSVDIDTVMPQDLINAKPAAA 182
EIDDIDHLGNRRVRSVGELMENQYRIGLLRMERAIKERMSSVDIDTVMPQDLINAKPAAA
Sbjct: 466 EIDDIDHLGNRRVRSVGELMENQYRIGLLRMERAIKERMSSVDIDTVMPQDLINAKPAAA 525
Query: 183 AVREFFGSSQLSQFMDQTNPLSEITHKRRLSA 278
AVREFFGSSQLSQFMDQTNPLSEITHKRRLSA
Sbjct: 526 AVREFFGSSQLSQFMDQTNPLSEITHKRRLSA 557
>WP_072387354.1 DNA-directed RNA polymerase subunit beta [Hyphomicrobium sp.
CS1BSMeth3]
Length = 1388
Score = 180 bits (457), Expect = 7e-51
Identities = 92/92 (100%), Positives = 92/92 (100%)
Frame = +3
Query: 3 EIDDIDHLGNRRVRSVGELMENQYRIGLLRMERAIKERMSSVDIDTVMPQDLINAKPAAA 182
EIDDIDHLGNRRVRSVGELMENQYRIGLLRMERAIKERMSSVDIDTVMPQDLINAKPAAA
Sbjct: 454 EIDDIDHLGNRRVRSVGELMENQYRIGLLRMERAIKERMSSVDIDTVMPQDLINAKPAAA 513
Query: 183 AVREFFGSSQLSQFMDQTNPLSEITHKRRLSA 278
AVREFFGSSQLSQFMDQTNPLSEITHKRRLSA
Sbjct: 514 AVREFFGSSQLSQFMDQTNPLSEITHKRRLSA 545
>ODT30966.1 DNA-directed RNA polymerase subunit beta [Hyphomicrobium sp. SCN
65-11]
Length = 1388
Score = 180 bits (457), Expect = 7e-51
Identities = 92/92 (100%), Positives = 92/92 (100%)
Frame = +3
Query: 3 EIDDIDHLGNRRVRSVGELMENQYRIGLLRMERAIKERMSSVDIDTVMPQDLINAKPAAA 182
EIDDIDHLGNRRVRSVGELMENQYRIGLLRMERAIKERMSSVDIDTVMPQDLINAKPAAA
Sbjct: 454 EIDDIDHLGNRRVRSVGELMENQYRIGLLRMERAIKERMSSVDIDTVMPQDLINAKPAAA 513
Query: 183 AVREFFGSSQLSQFMDQTNPLSEITHKRRLSA 278
AVREFFGSSQLSQFMDQTNPLSEITHKRRLSA
Sbjct: 514 AVREFFGSSQLSQFMDQTNPLSEITHKRRLSA 545
>WP_062314883.1 DNA-directed RNA polymerase subunit beta [Bradyrhizobium sp.
CCH10-C7]
Length = 1376
Score = 180 bits (457), Expect = 7e-51
Identities = 92/92 (100%), Positives = 92/92 (100%)
Frame = +3
Query: 3 EIDDIDHLGNRRVRSVGELMENQYRIGLLRMERAIKERMSSVDIDTVMPQDLINAKPAAA 182
EIDDIDHLGNRRVRSVGELMENQYRIGLLRMERAIKERMSSVDIDTVMPQDLINAKPAAA
Sbjct: 452 EIDDIDHLGNRRVRSVGELMENQYRIGLLRMERAIKERMSSVDIDTVMPQDLINAKPAAA 511
Query: 183 AVREFFGSSQLSQFMDQTNPLSEITHKRRLSA 278
AVREFFGSSQLSQFMDQTNPLSEITHKRRLSA
Sbjct: 512 AVREFFGSSQLSQFMDQTNPLSEITHKRRLSA 543
>AAU26030.1 RNA polymerase beta subunit [Afipia sp. SP17]
Length = 1376
Score = 180 bits (457), Expect = 7e-51
Identities = 92/92 (100%), Positives = 92/92 (100%)
Frame = +3
Query: 3 EIDDIDHLGNRRVRSVGELMENQYRIGLLRMERAIKERMSSVDIDTVMPQDLINAKPAAA 182
EIDDIDHLGNRRVRSVGELMENQYRIGLLRMERAIKERMSSVDIDTVMPQDLINAKPAAA
Sbjct: 452 EIDDIDHLGNRRVRSVGELMENQYRIGLLRMERAIKERMSSVDIDTVMPQDLINAKPAAA 511
Query: 183 AVREFFGSSQLSQFMDQTNPLSEITHKRRLSA 278
AVREFFGSSQLSQFMDQTNPLSEITHKRRLSA
Sbjct: 512 AVREFFGSSQLSQFMDQTNPLSEITHKRRLSA 543
>WP_019196571.1 MULTISPECIES: DNA-directed RNA polymerase subunit beta
[Bradyrhizobiaceae] AAP75727.1 RNA polymerase beta
subunit [Afipia birgiae 34632]
Length = 1376
Score = 180 bits (457), Expect = 7e-51
Identities = 92/92 (100%), Positives = 92/92 (100%)
Frame = +3
Query: 3 EIDDIDHLGNRRVRSVGELMENQYRIGLLRMERAIKERMSSVDIDTVMPQDLINAKPAAA 182
EIDDIDHLGNRRVRSVGELMENQYRIGLLRMERAIKERMSSVDIDTVMPQDLINAKPAAA
Sbjct: 452 EIDDIDHLGNRRVRSVGELMENQYRIGLLRMERAIKERMSSVDIDTVMPQDLINAKPAAA 511
Query: 183 AVREFFGSSQLSQFMDQTNPLSEITHKRRLSA 278
AVREFFGSSQLSQFMDQTNPLSEITHKRRLSA
Sbjct: 512 AVREFFGSSQLSQFMDQTNPLSEITHKRRLSA 543
>WP_002712314.1 DNA-directed RNA polymerase subunit beta [Afipia clevelandensis]
AAP75729.1 RNA polymerase beta subunit [Afipia
clevelandensis ATCC 49720] EGP06787.1 DNA-directed RNA
polymerase beta subunit [Bradyrhizobiaceae bacterium
SG-6C] EKS38979.1 DNA-directed RNA polymerase subunit
beta [Afipia clevelandensis ATCC 49720]
Length = 1376
Score = 180 bits (457), Expect = 7e-51
Identities = 92/92 (100%), Positives = 92/92 (100%)
Frame = +3
Query: 3 EIDDIDHLGNRRVRSVGELMENQYRIGLLRMERAIKERMSSVDIDTVMPQDLINAKPAAA 182
EIDDIDHLGNRRVRSVGELMENQYRIGLLRMERAIKERMSSVDIDTVMPQDLINAKPAAA
Sbjct: 452 EIDDIDHLGNRRVRSVGELMENQYRIGLLRMERAIKERMSSVDIDTVMPQDLINAKPAAA 511
Query: 183 AVREFFGSSQLSQFMDQTNPLSEITHKRRLSA 278
AVREFFGSSQLSQFMDQTNPLSEITHKRRLSA
Sbjct: 512 AVREFFGSSQLSQFMDQTNPLSEITHKRRLSA 543
>WP_046826844.1 DNA-directed RNA polymerase subunit beta [Afipia massiliensis]
KKY09779.1 DNA-directed RNA polymerase subunit beta
[Afipia massiliensis]
Length = 1375
Score = 180 bits (457), Expect = 7e-51
Identities = 92/92 (100%), Positives = 92/92 (100%)
Frame = +3
Query: 3 EIDDIDHLGNRRVRSVGELMENQYRIGLLRMERAIKERMSSVDIDTVMPQDLINAKPAAA 182
EIDDIDHLGNRRVRSVGELMENQYRIGLLRMERAIKERMSSVDIDTVMPQDLINAKPAAA
Sbjct: 452 EIDDIDHLGNRRVRSVGELMENQYRIGLLRMERAIKERMSSVDIDTVMPQDLINAKPAAA 511
Query: 183 AVREFFGSSQLSQFMDQTNPLSEITHKRRLSA 278
AVREFFGSSQLSQFMDQTNPLSEITHKRRLSA
Sbjct: 512 AVREFFGSSQLSQFMDQTNPLSEITHKRRLSA 543
>AAP75726.1 RNA polymerase beta subunit [Afipia massiliensis 34633]
Length = 1375
Score = 180 bits (457), Expect = 7e-51
Identities = 92/92 (100%), Positives = 92/92 (100%)
Frame = +3
Query: 3 EIDDIDHLGNRRVRSVGELMENQYRIGLLRMERAIKERMSSVDIDTVMPQDLINAKPAAA 182
EIDDIDHLGNRRVRSVGELMENQYRIGLLRMERAIKERMSSVDIDTVMPQDLINAKPAAA
Sbjct: 452 EIDDIDHLGNRRVRSVGELMENQYRIGLLRMERAIKERMSSVDIDTVMPQDLINAKPAAA 511
Query: 183 AVREFFGSSQLSQFMDQTNPLSEITHKRRLSA 278
AVREFFGSSQLSQFMDQTNPLSEITHKRRLSA
Sbjct: 512 AVREFFGSSQLSQFMDQTNPLSEITHKRRLSA 543
>SHL75782.1 DNA-directed RNA polymerase subunit beta [Bradyrhizobium lablabi]
Length = 1374
Score = 180 bits (457), Expect = 7e-51
Identities = 92/92 (100%), Positives = 92/92 (100%)
Frame = +3
Query: 3 EIDDIDHLGNRRVRSVGELMENQYRIGLLRMERAIKERMSSVDIDTVMPQDLINAKPAAA 182
EIDDIDHLGNRRVRSVGELMENQYRIGLLRMERAIKERMSSVDIDTVMPQDLINAKPAAA
Sbjct: 450 EIDDIDHLGNRRVRSVGELMENQYRIGLLRMERAIKERMSSVDIDTVMPQDLINAKPAAA 509
Query: 183 AVREFFGSSQLSQFMDQTNPLSEITHKRRLSA 278
AVREFFGSSQLSQFMDQTNPLSEITHKRRLSA
Sbjct: 510 AVREFFGSSQLSQFMDQTNPLSEITHKRRLSA 541