BLASTX nr result

ID: Glycyrrhiza35_contig00027975 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza35_contig00027975
         (401 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

YP_008999568.1 hypothetical protein AT66_p10 (mitochondrion) [He...    80   2e-16
AAA75457.1 ORFb, partial (mitochondrion) [Helianthus annuus]           78   2e-15
AGC78928.1 hypothetical protein (mitochondrion) [Vicia faba] AGC...    69   3e-13
BAD66740.1 orf310 (mitochondrion) [Beta vulgaris subsp. vulgaris]      58   2e-08
NP_064062.1 orf270 gene product (mitochondrion) [Beta vulgaris s...    54   2e-07

>YP_008999568.1 hypothetical protein AT66_p10 (mitochondrion) [Helianthus annuus]
           CAA44478.1 ORF 873 (mitochondrion) [Helianthus annuus]
           CAA37614.1 unnamed protein product (mitochondrion)
           [Helianthus annuus] AHF21041.1 hypothetical protein
           (mitochondrion) [Helianthus annuus]
          Length = 291

 Score = 80.5 bits (197), Expect(2) = 2e-16
 Identities = 46/75 (61%), Positives = 50/75 (66%), Gaps = 3/75 (4%)
 Frame = +1

Query: 121 STFIWKVXXXXXXXXXXXXXTSLPALESSSSR---ATFRAVIAA*NEAEIYARIRNLENR 291
           S F+WKV             TSLP LESSSS    ATFRA IAA NEAEI+ RIRNLE +
Sbjct: 92  SAFVWKVSSESGDA------TSLPPLESSSSSESLATFRAEIAAENEAEIFTRIRNLETQ 145

Query: 292 DFYNLPPLNPPGEYE 336
           D+YNLPP N PGEYE
Sbjct: 146 DYYNLPPQNNPGEYE 160



 Score = 32.3 bits (72), Expect(2) = 2e-16
 Identities = 13/21 (61%), Positives = 18/21 (85%)
 Frame = +2

Query: 338 EGLVRQHFDQALNVPHFREIL 400
           E LVR+ F+QAL+VPH+R +L
Sbjct: 160 EVLVREEFEQALDVPHYRTVL 180


>AAA75457.1 ORFb, partial (mitochondrion) [Helianthus annuus]
          Length = 167

 Score = 77.8 bits (190), Expect = 2e-15
 Identities = 45/75 (60%), Positives = 49/75 (65%), Gaps = 3/75 (4%)
 Frame = +1

Query: 121 STFIWKVXXXXXXXXXXXXXTSLPALESSSSR---ATFRAVIAA*NEAEIYARIRNLENR 291
           S F+WKV             TSLP LESSSS    ATFRA IAA NEAEI+  IRNLE +
Sbjct: 92  SAFVWKVSSESGDA------TSLPPLESSSSSESLATFRAEIAAENEAEIFTPIRNLETQ 145

Query: 292 DFYNLPPLNPPGEYE 336
           D+YNLPP N PGEYE
Sbjct: 146 DYYNLPPQNNPGEYE 160


>AGC78928.1 hypothetical protein (mitochondrion) [Vicia faba] AGC79027.1
           hypothetical protein (mitochondrion) [Vicia faba]
          Length = 177

 Score = 68.9 bits (167), Expect(2) = 3e-13
 Identities = 37/54 (68%), Positives = 43/54 (79%), Gaps = 3/54 (5%)
 Frame = +1

Query: 181 TSLPALESSSSR---ATFRAVIAA*NEAEIYARIRNLENRDFYNLPPLNPPGEY 333
           ++LPALESSSS    ATFR VIAA NEAEIY RIR LEN+ +YN+PP N PG+Y
Sbjct: 60  SNLPALESSSSYESLATFRNVIAAENEAEIYERIRVLENQHYYNIPPHNNPGDY 113



 Score = 33.1 bits (74), Expect(2) = 3e-13
 Identities = 14/18 (77%), Positives = 16/18 (88%)
 Frame = +2

Query: 344 LVRQHFDQALNVPHFREI 397
           LVR+HFDQALNV H+ EI
Sbjct: 116 LVREHFDQALNVDHYWEI 133


>BAD66740.1 orf310 (mitochondrion) [Beta vulgaris subsp. vulgaris]
          Length = 310

 Score = 57.8 bits (138), Expect(2) = 2e-08
 Identities = 31/53 (58%), Positives = 37/53 (69%), Gaps = 3/53 (5%)
 Frame = +1

Query: 190 PALESSSSR---ATFRAVIAA*NEAEIYARIRNLENRDFYNLPPLNPPGEYEG 339
           P LESSSS     T+R +IAA +EA+IY RI+ LE   +YNLPP N PGEY G
Sbjct: 126 PPLESSSSTESLGTYRNIIAAESEAQIYQRIQALEGGLYYNLPPQNEPGEYAG 178



 Score = 28.1 bits (61), Expect(2) = 2e-08
 Identities = 10/16 (62%), Positives = 13/16 (81%)
 Frame = +2

Query: 341 GLVRQHFDQALNVPHF 388
           G+VR HFDQA+ V H+
Sbjct: 178 GIVRAHFDQAITVDHY 193


>NP_064062.1 orf270 gene product (mitochondrion) [Beta vulgaris subsp. vulgaris]
           YP_004222257.1 hypothetical protein BevumaM_p018
           (mitochondrion) [Beta vulgaris subsp. maritima]
           YP_004842064.1 hypothetical protein BemaM_p016
           (mitochondrion) [Beta macrocarpa] BAA99454.1 orf270
           (mitochondrion) [Beta vulgaris subsp. vulgaris]
           CBJ14087.1 hypothetical protein (mitochondrion) [Beta
           vulgaris subsp. maritima] CBJ17496.1 hypothetical
           protein (mitochondrion) [Beta vulgaris subsp. maritima]
           CBX24869.1 hypothetical protein (mitochondrion) [Beta
           macrocarpa] CBL52061.1 hypothetical protein
           (mitochondrion) [Beta vulgaris subsp. maritima]
          Length = 270

 Score = 54.3 bits (129), Expect(2) = 2e-07
 Identities = 30/53 (56%), Positives = 36/53 (67%), Gaps = 3/53 (5%)
 Frame = +1

Query: 190 PALESSSSR---ATFRAVIAA*NEAEIYARIRNLENRDFYNLPPLNPPGEYEG 339
           P LESSSS     T+R +IAA +EA+IY RI+ LE   + NLPP N PGEY G
Sbjct: 86  PPLESSSSTESLGTYRNIIAAESEAQIYQRIQALEGGLYSNLPPQNEPGEYAG 138



 Score = 28.1 bits (61), Expect(2) = 2e-07
 Identities = 10/16 (62%), Positives = 13/16 (81%)
 Frame = +2

Query: 341 GLVRQHFDQALNVPHF 388
           G+VR HFDQA+ V H+
Sbjct: 138 GIVRAHFDQAITVDHY 153


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