BLASTX nr result

ID: Glycyrrhiza35_contig00027824 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza35_contig00027824
         (386 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJO61254.1 CenH3 [Vicia villosa]                                       55   4e-07
XP_019455729.1 PREDICTED: histone H3-like centromeric protein HT...    54   2e-06
XP_019455728.1 PREDICTED: histone H3-like centromeric protein HT...    54   2e-06
OIW14720.1 hypothetical protein TanjilG_33062, partial [Lupinus ...    51   7e-06
BAL42672.1 centromere specific histone H3 variant [Astragalus si...    52   7e-06

>AJO61254.1 CenH3 [Vicia villosa]
          Length = 134

 Score = 55.1 bits (131), Expect = 4e-07
 Identities = 27/40 (67%), Positives = 29/40 (72%), Gaps = 3/40 (7%)
 Frame = -1

Query: 386 HAKRVTLMKKDFELARRLAGIGRPW*EHD---SSIEYHSC 276
           HAKRVTLMKKD EL RRL GI RPW +HD   +S E H C
Sbjct: 95  HAKRVTLMKKDIELTRRLTGIARPWWKHDTVVTSSENHCC 134


>XP_019455729.1 PREDICTED: histone H3-like centromeric protein HTR12 isoform X2
           [Lupinus angustifolius]
          Length = 145

 Score = 53.5 bits (127), Expect = 2e-06
 Identities = 23/25 (92%), Positives = 24/25 (96%)
 Frame = -1

Query: 386 HAKRVTLMKKDFELARRLAGIGRPW 312
           HAKR+TLMKKDFELARRL GIGRPW
Sbjct: 121 HAKRITLMKKDFELARRLGGIGRPW 145


>XP_019455728.1 PREDICTED: histone H3-like centromeric protein HTR12 isoform X1
           [Lupinus angustifolius] OIW04633.1 hypothetical protein
           TanjilG_30531 [Lupinus angustifolius]
          Length = 148

 Score = 53.5 bits (127), Expect = 2e-06
 Identities = 23/25 (92%), Positives = 24/25 (96%)
 Frame = -1

Query: 386 HAKRVTLMKKDFELARRLAGIGRPW 312
           HAKR+TLMKKDFELARRL GIGRPW
Sbjct: 124 HAKRITLMKKDFELARRLGGIGRPW 148


>OIW14720.1 hypothetical protein TanjilG_33062, partial [Lupinus angustifolius]
          Length = 101

 Score = 51.2 bits (121), Expect = 7e-06
 Identities = 22/25 (88%), Positives = 23/25 (92%)
 Frame = -1

Query: 386 HAKRVTLMKKDFELARRLAGIGRPW 312
           HAKRVTLMKKD ELARRL G+GRPW
Sbjct: 77  HAKRVTLMKKDLELARRLGGVGRPW 101


>BAL42672.1 centromere specific histone H3 variant [Astragalus sinicus]
          Length = 122

 Score = 51.6 bits (122), Expect = 7e-06
 Identities = 22/25 (88%), Positives = 24/25 (96%)
 Frame = -1

Query: 386 HAKRVTLMKKDFELARRLAGIGRPW 312
           HA+RVTL+KKDFELARRL GIGRPW
Sbjct: 98  HARRVTLLKKDFELARRLGGIGRPW 122


Top