BLASTX nr result
ID: Glycyrrhiza35_contig00027609
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza35_contig00027609
(257 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
WP_038382814.1 DNA-directed RNA polymerase sigma-70 factor [Brad... 117 1e-31
WP_028341262.1 DNA-directed RNA polymerase sigma-70 factor [Brad... 117 1e-31
SDF77945.1 RNA polymerase sigma-70 factor, ECF subfamily [Bradyr... 117 2e-31
WP_066502193.1 RNA polymerase subunit sigma-70 [Bradyrhizobium s... 117 2e-31
WP_057862050.1 MULTISPECIES: RNA polymerase subunit sigma-70 [Br... 117 2e-31
WP_057853346.1 RNA polymerase subunit sigma-70 [Bradyrhizobium v... 117 2e-31
WP_050401124.1 RNA polymerase subunit sigma-70 [Bradyrhizobium e... 117 2e-31
WP_050425319.1 RNA polymerase subunit sigma-70 [Bradyrhizobium v... 117 2e-31
WP_029083680.1 DNA-directed RNA polymerase sigma-70 factor [Brad... 117 2e-31
WP_028335734.1 MULTISPECIES: DNA-directed RNA polymerase sigma-7... 117 2e-31
ERF79863.1 sigma-70 family RNA polymerase sigma factor [Bradyrhi... 117 2e-31
WP_016848566.1 MULTISPECIES: DNA-directed RNA polymerase sigma-7... 117 2e-31
WP_057834982.1 RNA polymerase subunit sigma-70 [Bradyrhizobium j... 117 2e-31
WP_024583952.1 MULTISPECIES: DNA-directed RNA polymerase sigma-7... 115 6e-31
WP_057842913.1 RNA polymerase subunit sigma-70 [Bradyrhizobium r... 115 7e-31
WP_028347245.1 MULTISPECIES: DNA-directed RNA polymerase sigma-7... 115 7e-31
WP_074818841.1 RNA polymerase subunit sigma-70 [Bradyrhizobium l... 115 8e-31
SHK11026.1 RNA polymerase sigma-70 factor, ECF subfamily [Bradyr... 115 1e-30
WP_074132092.1 RNA polymerase subunit sigma-70 [Bradyrhizobium s... 114 2e-30
SEC88765.1 RNA polymerase sigma-70 factor, ECF subfamily [Bradyr... 114 2e-30
>WP_038382814.1 DNA-directed RNA polymerase sigma-70 factor [Bradyrhizobium
elkanii]
Length = 181
Score = 117 bits (294), Expect = 1e-31
Identities = 62/71 (87%), Positives = 62/71 (87%)
Frame = -2
Query: 214 MLTPAELVWLIXXXXXXXXXAFERLYAATRAKLFGVVLRILRRQDLAEEVLQEAYVKIWN 35
MLTPAELVWLI AFERLYAATRAKLFGVVLRILRRQDLAEEVLQEAYVKIWN
Sbjct: 1 MLTPAELVWLIAAVAKGDEAAFERLYAATRAKLFGVVLRILRRQDLAEEVLQEAYVKIWN 60
Query: 34 SAGQFNPALSS 2
SAGQFNPALSS
Sbjct: 61 SAGQFNPALSS 71
>WP_028341262.1 DNA-directed RNA polymerase sigma-70 factor [Bradyrhizobium
elkanii]
Length = 181
Score = 117 bits (294), Expect = 1e-31
Identities = 62/71 (87%), Positives = 62/71 (87%)
Frame = -2
Query: 214 MLTPAELVWLIXXXXXXXXXAFERLYAATRAKLFGVVLRILRRQDLAEEVLQEAYVKIWN 35
MLTPAELVWLI AFERLYAATRAKLFGVVLRILRRQDLAEEVLQEAYVKIWN
Sbjct: 1 MLTPAELVWLIAAVAKGDEAAFERLYAATRAKLFGVVLRILRRQDLAEEVLQEAYVKIWN 60
Query: 34 SAGQFNPALSS 2
SAGQFNPALSS
Sbjct: 61 SAGQFNPALSS 71
>SDF77945.1 RNA polymerase sigma-70 factor, ECF subfamily [Bradyrhizobium sp.
R5]
Length = 181
Score = 117 bits (292), Expect = 2e-31
Identities = 61/71 (85%), Positives = 62/71 (87%)
Frame = -2
Query: 214 MLTPAELVWLIXXXXXXXXXAFERLYAATRAKLFGVVLRILRRQDLAEEVLQEAYVKIWN 35
MLTPAELVWLI AFERLYAATRAKLFGVVLRILRRQDLAEEV+QEAYVKIWN
Sbjct: 1 MLTPAELVWLIAAVAKGDEAAFERLYAATRAKLFGVVLRILRRQDLAEEVIQEAYVKIWN 60
Query: 34 SAGQFNPALSS 2
SAGQFNPALSS
Sbjct: 61 SAGQFNPALSS 71
>WP_066502193.1 RNA polymerase subunit sigma-70 [Bradyrhizobium sp. BR 10303]
KWV59315.1 RNA polymerase subunit sigma-70
[Bradyrhizobium sp. BR 10303]
Length = 181
Score = 117 bits (292), Expect = 2e-31
Identities = 61/71 (85%), Positives = 62/71 (87%)
Frame = -2
Query: 214 MLTPAELVWLIXXXXXXXXXAFERLYAATRAKLFGVVLRILRRQDLAEEVLQEAYVKIWN 35
MLTPAELVWLI AFERLYAATRAKLFGVVLRILRRQDLAEEV+QEAYVKIWN
Sbjct: 1 MLTPAELVWLIAAVAKGDEAAFERLYAATRAKLFGVVLRILRRQDLAEEVIQEAYVKIWN 60
Query: 34 SAGQFNPALSS 2
SAGQFNPALSS
Sbjct: 61 SAGQFNPALSS 71
>WP_057862050.1 MULTISPECIES: RNA polymerase subunit sigma-70 [Bradyrhizobium]
KRR17466.1 RNA polymerase subunit sigma-70
[Bradyrhizobium lablabi] OCK63488.1 RNA polymerase
subunit sigma-70 [Bradyrhizobium paxllaeri]
Length = 181
Score = 117 bits (292), Expect = 2e-31
Identities = 61/71 (85%), Positives = 62/71 (87%)
Frame = -2
Query: 214 MLTPAELVWLIXXXXXXXXXAFERLYAATRAKLFGVVLRILRRQDLAEEVLQEAYVKIWN 35
MLTPAELVWLI AFERLYAATRAKLFGVVLRILRRQDLAEEV+QEAYVKIWN
Sbjct: 1 MLTPAELVWLIAAVAKGDEAAFERLYAATRAKLFGVVLRILRRQDLAEEVIQEAYVKIWN 60
Query: 34 SAGQFNPALSS 2
SAGQFNPALSS
Sbjct: 61 SAGQFNPALSS 71
>WP_057853346.1 RNA polymerase subunit sigma-70 [Bradyrhizobium valentinum]
KRR01898.1 RNA polymerase subunit sigma-70
[Bradyrhizobium valentinum] KRR07530.1 RNA polymerase
subunit sigma-70 [Bradyrhizobium valentinum]
Length = 181
Score = 117 bits (292), Expect = 2e-31
Identities = 61/71 (85%), Positives = 62/71 (87%)
Frame = -2
Query: 214 MLTPAELVWLIXXXXXXXXXAFERLYAATRAKLFGVVLRILRRQDLAEEVLQEAYVKIWN 35
MLTPAELVWLI AFERLYAATRAKLFGVVLRILRRQDLAEEV+QEAYVKIWN
Sbjct: 1 MLTPAELVWLIAAVAKGDEAAFERLYAATRAKLFGVVLRILRRQDLAEEVIQEAYVKIWN 60
Query: 34 SAGQFNPALSS 2
SAGQFNPALSS
Sbjct: 61 SAGQFNPALSS 71
>WP_050401124.1 RNA polymerase subunit sigma-70 [Bradyrhizobium embrapense]
Length = 181
Score = 117 bits (292), Expect = 2e-31
Identities = 61/71 (85%), Positives = 62/71 (87%)
Frame = -2
Query: 214 MLTPAELVWLIXXXXXXXXXAFERLYAATRAKLFGVVLRILRRQDLAEEVLQEAYVKIWN 35
MLTPAELVWLI AFERLYAATRAKLFGVVLRILRRQDLAEEV+QEAYVKIWN
Sbjct: 1 MLTPAELVWLIAAVAKGDQAAFERLYAATRAKLFGVVLRILRRQDLAEEVIQEAYVKIWN 60
Query: 34 SAGQFNPALSS 2
SAGQFNPALSS
Sbjct: 61 SAGQFNPALSS 71
>WP_050425319.1 RNA polymerase subunit sigma-70 [Bradyrhizobium viridifuturi]
Length = 181
Score = 117 bits (292), Expect = 2e-31
Identities = 61/71 (85%), Positives = 62/71 (87%)
Frame = -2
Query: 214 MLTPAELVWLIXXXXXXXXXAFERLYAATRAKLFGVVLRILRRQDLAEEVLQEAYVKIWN 35
MLTPAELVWLI AFERLYAATRAKLFGVVLRILRRQDLAEEV+QEAYVKIWN
Sbjct: 1 MLTPAELVWLIAAVAKGDEAAFERLYAATRAKLFGVVLRILRRQDLAEEVIQEAYVKIWN 60
Query: 34 SAGQFNPALSS 2
SAGQFNPALSS
Sbjct: 61 SAGQFNPALSS 71
>WP_029083680.1 DNA-directed RNA polymerase sigma-70 factor [Bradyrhizobium sp.
th.b2]
Length = 181
Score = 117 bits (292), Expect = 2e-31
Identities = 61/71 (85%), Positives = 62/71 (87%)
Frame = -2
Query: 214 MLTPAELVWLIXXXXXXXXXAFERLYAATRAKLFGVVLRILRRQDLAEEVLQEAYVKIWN 35
MLTPAELVWLI AFERLYAATRAKLFGVVLRILRRQDLAEEV+QEAYVKIWN
Sbjct: 1 MLTPAELVWLIAAVARGDEAAFERLYAATRAKLFGVVLRILRRQDLAEEVIQEAYVKIWN 60
Query: 34 SAGQFNPALSS 2
SAGQFNPALSS
Sbjct: 61 SAGQFNPALSS 71
>WP_028335734.1 MULTISPECIES: DNA-directed RNA polymerase sigma-70 factor
[Bradyrhizobium] KRQ13142.1 RNA polymerase subunit
sigma-70 [Bradyrhizobium pachyrhizi] OMI15097.1 RNA
polymerase subunit sigma-70 [Bradyrhizobium sp. UFLA
03-321]
Length = 181
Score = 117 bits (292), Expect = 2e-31
Identities = 61/71 (85%), Positives = 62/71 (87%)
Frame = -2
Query: 214 MLTPAELVWLIXXXXXXXXXAFERLYAATRAKLFGVVLRILRRQDLAEEVLQEAYVKIWN 35
MLTPAELVWLI AFERLYAATRAKLFGVVLRILRRQDLAEEV+QEAYVKIWN
Sbjct: 1 MLTPAELVWLIAAVAKGDEAAFERLYAATRAKLFGVVLRILRRQDLAEEVIQEAYVKIWN 60
Query: 34 SAGQFNPALSS 2
SAGQFNPALSS
Sbjct: 61 SAGQFNPALSS 71
>ERF79863.1 sigma-70 family RNA polymerase sigma factor [Bradyrhizobium sp.
DFCI-1]
Length = 181
Score = 117 bits (292), Expect = 2e-31
Identities = 61/71 (85%), Positives = 62/71 (87%)
Frame = -2
Query: 214 MLTPAELVWLIXXXXXXXXXAFERLYAATRAKLFGVVLRILRRQDLAEEVLQEAYVKIWN 35
MLTPAELVWLI AFERLYAATRAKLFGVVLRILRRQDLAEEV+QEAYVKIWN
Sbjct: 1 MLTPAELVWLIAAVAKGDEAAFERLYAATRAKLFGVVLRILRRQDLAEEVIQEAYVKIWN 60
Query: 34 SAGQFNPALSS 2
SAGQFNPALSS
Sbjct: 61 SAGQFNPALSS 71
>WP_016848566.1 MULTISPECIES: DNA-directed RNA polymerase sigma-70 factor
[Bradyrhizobium] ODM75826.1 RNA polymerase subunit
sigma-70 [Bradyrhizobium elkanii] ODM86055.1 RNA
polymerase subunit sigma-70 [Bradyrhizobium elkanii]
OIM89213.1 RNA polymerase subunit sigma-70
[Bradyrhizobium elkanii]
Length = 181
Score = 117 bits (292), Expect = 2e-31
Identities = 61/71 (85%), Positives = 62/71 (87%)
Frame = -2
Query: 214 MLTPAELVWLIXXXXXXXXXAFERLYAATRAKLFGVVLRILRRQDLAEEVLQEAYVKIWN 35
MLTPAELVWLI AFERLYAATRAKLFGVVLRILRRQDLAEEV+QEAYVKIWN
Sbjct: 1 MLTPAELVWLIAAVAKGDEAAFERLYAATRAKLFGVVLRILRRQDLAEEVIQEAYVKIWN 60
Query: 34 SAGQFNPALSS 2
SAGQFNPALSS
Sbjct: 61 SAGQFNPALSS 71
>WP_057834982.1 RNA polymerase subunit sigma-70 [Bradyrhizobium jicamae] KRR10687.1
RNA polymerase subunit sigma-70 [Bradyrhizobium jicamae]
Length = 185
Score = 117 bits (292), Expect = 2e-31
Identities = 61/71 (85%), Positives = 62/71 (87%)
Frame = -2
Query: 214 MLTPAELVWLIXXXXXXXXXAFERLYAATRAKLFGVVLRILRRQDLAEEVLQEAYVKIWN 35
MLTPAELVWLI AFERLYAATRAKLFGVVLRILRRQDLAEEV+QEAYVKIWN
Sbjct: 1 MLTPAELVWLIAAVAKGDEAAFERLYAATRAKLFGVVLRILRRQDLAEEVIQEAYVKIWN 60
Query: 34 SAGQFNPALSS 2
SAGQFNPALSS
Sbjct: 61 SAGQFNPALSS 71
>WP_024583952.1 MULTISPECIES: DNA-directed RNA polymerase sigma-70 factor
[Bradyrhizobium] KIU44239.1 RNA polymerase sigma70
factor [Bradyrhizobium elkanii] OCX27979.1 RNA
polymerase subunit sigma-70 [Bradyrhizobium sp.
UASWS1016]
Length = 181
Score = 115 bits (289), Expect = 6e-31
Identities = 60/71 (84%), Positives = 62/71 (87%)
Frame = -2
Query: 214 MLTPAELVWLIXXXXXXXXXAFERLYAATRAKLFGVVLRILRRQDLAEEVLQEAYVKIWN 35
MLTPAELVWLI AFERLYAATR+KLFGVVLRILRRQDLAEEV+QEAYVKIWN
Sbjct: 1 MLTPAELVWLIAAVAKGDEAAFERLYAATRSKLFGVVLRILRRQDLAEEVIQEAYVKIWN 60
Query: 34 SAGQFNPALSS 2
SAGQFNPALSS
Sbjct: 61 SAGQFNPALSS 71
>WP_057842913.1 RNA polymerase subunit sigma-70 [Bradyrhizobium retamae] KRR28416.1
RNA polymerase subunit sigma-70 [Bradyrhizobium retamae]
Length = 185
Score = 115 bits (289), Expect = 7e-31
Identities = 60/71 (84%), Positives = 62/71 (87%)
Frame = -2
Query: 214 MLTPAELVWLIXXXXXXXXXAFERLYAATRAKLFGVVLRILRRQDLAEEVLQEAYVKIWN 35
MLTPAELVWLI AFERLYAATRAKLFGVVLRILRRQDLAEEV+QEAYVKIWN
Sbjct: 1 MLTPAELVWLIAAVAKGDEAAFERLYAATRAKLFGVVLRILRRQDLAEEVIQEAYVKIWN 60
Query: 34 SAGQFNPALSS 2
SAGQFNPAL+S
Sbjct: 61 SAGQFNPALAS 71
>WP_028347245.1 MULTISPECIES: DNA-directed RNA polymerase sigma-70 factor
[Bradyrhizobium] OCK58231.1 RNA polymerase subunit
sigma-70 [Bradyrhizobium sp. LMTR 3]
Length = 185
Score = 115 bits (289), Expect = 7e-31
Identities = 60/71 (84%), Positives = 62/71 (87%)
Frame = -2
Query: 214 MLTPAELVWLIXXXXXXXXXAFERLYAATRAKLFGVVLRILRRQDLAEEVLQEAYVKIWN 35
MLTPAELVWLI AFERLYAATRAKLFGVVLRILRRQDLAEEV+QEAYVKIWN
Sbjct: 1 MLTPAELVWLIAAVAKGDEAAFERLYAATRAKLFGVVLRILRRQDLAEEVIQEAYVKIWN 60
Query: 34 SAGQFNPALSS 2
SAGQFNPAL+S
Sbjct: 61 SAGQFNPALAS 71
>WP_074818841.1 RNA polymerase subunit sigma-70 [Bradyrhizobium lablabi] SDJ24392.1
RNA polymerase sigma-70 factor, ECF subfamily
[Bradyrhizobium ottawaense] SEC77649.1 RNA polymerase
sigma-70 factor, ECF subfamily [Bradyrhizobium lablabi]
SHK89413.1 RNA polymerase sigma-70 factor, ECF subfamily
[Bradyrhizobium lablabi]
Length = 181
Score = 115 bits (288), Expect = 8e-31
Identities = 60/71 (84%), Positives = 61/71 (85%)
Frame = -2
Query: 214 MLTPAELVWLIXXXXXXXXXAFERLYAATRAKLFGVVLRILRRQDLAEEVLQEAYVKIWN 35
MLTPAELVWLI AFERLYAATRAKLFGVVLRILRRQDLAEEV+QEAYVKIWN
Sbjct: 1 MLTPAELVWLIAAVAKGDEAAFERLYAATRAKLFGVVLRILRRQDLAEEVIQEAYVKIWN 60
Query: 34 SAGQFNPALSS 2
SAGQFNP LSS
Sbjct: 61 SAGQFNPGLSS 71
>SHK11026.1 RNA polymerase sigma-70 factor, ECF subfamily [Bradyrhizobium
lablabi]
Length = 181
Score = 115 bits (287), Expect = 1e-30
Identities = 59/71 (83%), Positives = 62/71 (87%)
Frame = -2
Query: 214 MLTPAELVWLIXXXXXXXXXAFERLYAATRAKLFGVVLRILRRQDLAEEVLQEAYVKIWN 35
MLTPAELVWLI AFERLYAATRAKLFGVV+RILRRQDLAEEV+QEAYVKIWN
Sbjct: 1 MLTPAELVWLIAAVAKGDQAAFERLYAATRAKLFGVVIRILRRQDLAEEVIQEAYVKIWN 60
Query: 34 SAGQFNPALSS 2
SAGQFNPAL+S
Sbjct: 61 SAGQFNPALAS 71
>WP_074132092.1 RNA polymerase subunit sigma-70 [Bradyrhizobium sp. NAS96.2]
OKO67554.1 RNA polymerase sigma70 factor [Bradyrhizobium
sp. NAS96.2]
Length = 181
Score = 114 bits (286), Expect = 2e-30
Identities = 60/71 (84%), Positives = 61/71 (85%)
Frame = -2
Query: 214 MLTPAELVWLIXXXXXXXXXAFERLYAATRAKLFGVVLRILRRQDLAEEVLQEAYVKIWN 35
MLTPAELVWLI AFERLYAATRAKLFGVVLRILRR DLAEEV+QEAYVKIWN
Sbjct: 1 MLTPAELVWLIAAVAKGDEAAFERLYAATRAKLFGVVLRILRRPDLAEEVIQEAYVKIWN 60
Query: 34 SAGQFNPALSS 2
SAGQFNPALSS
Sbjct: 61 SAGQFNPALSS 71
>SEC88765.1 RNA polymerase sigma-70 factor, ECF subfamily [Bradyrhizobium
erythrophlei]
Length = 181
Score = 114 bits (286), Expect = 2e-30
Identities = 59/71 (83%), Positives = 62/71 (87%)
Frame = -2
Query: 214 MLTPAELVWLIXXXXXXXXXAFERLYAATRAKLFGVVLRILRRQDLAEEVLQEAYVKIWN 35
MLTPAELVWLI AFERLYAATR+KLFGVVLRILRRQDLAEEV+QEAYVKIWN
Sbjct: 1 MLTPAELVWLIAAVAKGDQAAFERLYAATRSKLFGVVLRILRRQDLAEEVIQEAYVKIWN 60
Query: 34 SAGQFNPALSS 2
+AGQFNPALSS
Sbjct: 61 NAGQFNPALSS 71