BLASTX nr result
ID: Glycyrrhiza35_contig00027077
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza35_contig00027077
(248 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
EQB04642.1 diguanylate cyclase [Sphingobium sp. HDIP04] 106 6e-25
WP_021316401.1 MULTISPECIES: GGDEF domain-containing protein [Sp... 106 6e-25
WP_013039030.1 GGDEF domain-containing protein [Sphingobium japo... 106 6e-25
WP_063769453.1 GGDEF domain-containing protein [Rhizobium tropic... 102 9e-24
KEQ52197.1 putative signal transduction protein [Sphingobium chl... 102 9e-24
WP_066620752.1 GGDEF domain-containing protein [Bosea sp. PAMC 2... 102 2e-23
WP_068074335.1 GGDEF domain-containing protein [Novosphingobium ... 102 2e-23
WP_057193864.1 GGDEF domain-containing protein [Bosea sp. Root48... 101 2e-23
WP_006199602.1 EAL domain-containing protein [Mesorhizobium amor... 97 2e-23
WP_056567249.1 EAL domain-containing protein [Mesorhizobium sp. ... 98 7e-23
ODT43330.1 diguanylate cyclase [Methylobacterium sp. SCN 67-24] 99 2e-22
WP_076745472.1 diguanylate cyclase [Sphingomonas sp. G39] 99 2e-22
WP_033838935.1 bifunctional diguanylate cyclase/phosphodiesteras... 99 2e-22
ONF95160.1 Phytochrome-like protein cph2 [Sphingomonas sp. G39] 99 2e-22
WP_038358085.1 GGDEF domain-containing protein [Bosea sp. UNC402... 96 2e-21
WP_027054546.1 GGDEF domain-containing protein [Mesorhizobium er... 96 3e-21
SFR97056.1 diguanylate cyclase/phosphodiesterase [Sphingomonas s... 96 4e-21
WP_051544291.1 GGDEF-domain containing protein [Roseomonas mucosa] 95 6e-21
WP_069064200.1 GGDEF domain-containing protein [Sphingobium sp. ... 95 7e-21
OJH51533.1 diguanylate cyclase [Rhizobium pusense] 95 7e-21
>EQB04642.1 diguanylate cyclase [Sphingobium sp. HDIP04]
Length = 619
Score = 106 bits (264), Expect = 6e-25
Identities = 54/81 (66%), Positives = 66/81 (81%)
Frame = +2
Query: 5 ETFSIGCRNGDVDRVVERLRASGIRVALDDFGTGHASLTHLLNVPVDAIKIDQTFVARLK 184
E IG R+G V R +ERLRA+G+RVALDDFGTGHASLTH+LNVPVD IKID++FV RL
Sbjct: 460 EDVYIGRRDGVVAREIERLRATGVRVALDDFGTGHASLTHVLNVPVDIIKIDRSFVERLW 519
Query: 185 RHDASLAIVQGIIDIARKLDI 247
D S+ IV+G+I IAR+L+I
Sbjct: 520 PDDPSIVIVEGLIKIARRLEI 540
>WP_021316401.1 MULTISPECIES: GGDEF domain-containing protein [Sphingobium]
EQB33765.1 diguanylate cyclase [Sphingobium ummariense
RL-3]
Length = 627
Score = 106 bits (264), Expect = 6e-25
Identities = 54/81 (66%), Positives = 66/81 (81%)
Frame = +2
Query: 5 ETFSIGCRNGDVDRVVERLRASGIRVALDDFGTGHASLTHLLNVPVDAIKIDQTFVARLK 184
E IG R+G V R +ERLRA+G+RVALDDFGTGHASLTH+LNVPVD IKID++FV RL
Sbjct: 468 EDVYIGRRDGVVAREIERLRATGVRVALDDFGTGHASLTHVLNVPVDIIKIDRSFVERLW 527
Query: 185 RHDASLAIVQGIIDIARKLDI 247
D S+ IV+G+I IAR+L+I
Sbjct: 528 PDDPSIVIVEGLIKIARRLEI 548
>WP_013039030.1 GGDEF domain-containing protein [Sphingobium japonicum] BAI95250.1
putative signal transduction protein [Sphingobium
japonicum UT26S]
Length = 629
Score = 106 bits (264), Expect = 6e-25
Identities = 54/81 (66%), Positives = 66/81 (81%)
Frame = +2
Query: 5 ETFSIGCRNGDVDRVVERLRASGIRVALDDFGTGHASLTHLLNVPVDAIKIDQTFVARLK 184
E IG R+G V R +ERLRA+G+RVALDDFGTGHASLTH+LNVPVD IKID++FV RL
Sbjct: 470 EDVYIGRRDGVVAREIERLRATGVRVALDDFGTGHASLTHVLNVPVDIIKIDRSFVERLW 529
Query: 185 RHDASLAIVQGIIDIARKLDI 247
D S+ IV+G+I IAR+L+I
Sbjct: 530 PDDPSIVIVEGLIKIARRLEI 550
>WP_063769453.1 GGDEF domain-containing protein [Rhizobium tropici] OJY74065.1
diguanylate cyclase [Rhizobium sp. 60-20]
Length = 627
Score = 102 bits (255), Expect = 9e-24
Identities = 50/81 (61%), Positives = 66/81 (81%)
Frame = +2
Query: 5 ETFSIGCRNGDVDRVVERLRASGIRVALDDFGTGHASLTHLLNVPVDAIKIDQTFVARLK 184
E S+G R+ + + RLR SG+RV+LDDFGTGHASLTHL+++PVDAIKID++FVA+L
Sbjct: 466 ENVSVGRRDKVISAEISRLRRSGVRVSLDDFGTGHASLTHLVSMPVDAIKIDRSFVAQLW 525
Query: 185 RHDASLAIVQGIIDIARKLDI 247
D ++ IVQG+IDIAR+LDI
Sbjct: 526 PDDPAMVIVQGLIDIARQLDI 546
>KEQ52197.1 putative signal transduction protein [Sphingobium chlorophenolicum]
Length = 633
Score = 102 bits (255), Expect = 9e-24
Identities = 53/81 (65%), Positives = 65/81 (80%)
Frame = +2
Query: 5 ETFSIGCRNGDVDRVVERLRASGIRVALDDFGTGHASLTHLLNVPVDAIKIDQTFVARLK 184
E +G R+ V + +E LRA+G+ VALDDFGTG+ASLTHLL+VPVD IKIDQTFVARL
Sbjct: 468 EDVYLGRRDRVVAKEIESLRAAGVLVALDDFGTGYASLTHLLSVPVDIIKIDQTFVARLW 527
Query: 185 RHDASLAIVQGIIDIARKLDI 247
D S+ IV+G+IDIAR+LDI
Sbjct: 528 PEDPSMVIVEGLIDIARRLDI 548
>WP_066620752.1 GGDEF domain-containing protein [Bosea sp. PAMC 26642] AMJ63785.1
diguanylate cyclase [Bosea sp. PAMC 26642]
Length = 599
Score = 102 bits (253), Expect = 2e-23
Identities = 52/81 (64%), Positives = 64/81 (79%)
Frame = +2
Query: 5 ETFSIGCRNGDVDRVVERLRASGIRVALDDFGTGHASLTHLLNVPVDAIKIDQTFVARLK 184
E+ +G R+ V R ++ LRA G+RVALDDFGTG ASLTHLL VP+D IKID++F+ RL
Sbjct: 458 ESVYLGQRDPIVAREIKALRAHGLRVALDDFGTGFASLTHLLTVPIDIIKIDKSFIDRLD 517
Query: 185 RHDASLAIVQGIIDIARKLDI 247
D SLAIVQG++DIARKLDI
Sbjct: 518 EGDPSLAIVQGLVDIARKLDI 538
>WP_068074335.1 GGDEF domain-containing protein [Novosphingobium lentum]
Length = 634
Score = 102 bits (253), Expect = 2e-23
Identities = 53/81 (65%), Positives = 64/81 (79%)
Frame = +2
Query: 5 ETFSIGCRNGDVDRVVERLRASGIRVALDDFGTGHASLTHLLNVPVDAIKIDQTFVARLK 184
E G R+ V + +E LRA+G+ VALDDFGTG+ASLTHLLNVPVD IKIDQ FVARL
Sbjct: 475 EDVYFGRRDRVVAKEIESLRAAGVLVALDDFGTGYASLTHLLNVPVDIIKIDQAFVARLW 534
Query: 185 RHDASLAIVQGIIDIARKLDI 247
DAS+ IV+G+I+IAR+LDI
Sbjct: 535 PDDASMVIVEGLIEIARRLDI 555
>WP_057193864.1 GGDEF domain-containing protein [Bosea sp. Root483D1] KRE11815.1
diguanylate cyclase [Bosea sp. Root483D1]
Length = 608
Score = 101 bits (252), Expect = 2e-23
Identities = 51/81 (62%), Positives = 64/81 (79%)
Frame = +2
Query: 5 ETFSIGCRNGDVDRVVERLRASGIRVALDDFGTGHASLTHLLNVPVDAIKIDQTFVARLK 184
E+ +G R+ V R ++ LR G+RVALDDFGTG+ASLTHLL VPVD IKID+ F+ RL
Sbjct: 458 ESVYLGQRDPVVAREIKALRGHGLRVALDDFGTGYASLTHLLTVPVDIIKIDKAFIDRLA 517
Query: 185 RHDASLAIVQGIIDIARKLDI 247
+ D SLAIV+G++DIARKLDI
Sbjct: 518 KDDPSLAIVEGLVDIARKLDI 538
>WP_006199602.1 EAL domain-containing protein [Mesorhizobium amorphae] EHH13967.1
GGDEF domain/EAL domain/GAF domain-containing protein
[Mesorhizobium amorphae CCNWGS0123] ANT54917.1
hypothetical protein A6B35_33825 (plasmid)
[Mesorhizobium amorphae CCNWGS0123]
Length = 192
Score = 96.7 bits (239), Expect = 2e-23
Identities = 50/81 (61%), Positives = 64/81 (79%)
Frame = +2
Query: 5 ETFSIGCRNGDVDRVVERLRASGIRVALDDFGTGHASLTHLLNVPVDAIKIDQTFVARLK 184
E+ +G R+ V R ++ LRA G+RVALDDFGTG ASLTHLL VPVD IKID++F+ RL
Sbjct: 46 ESVYLGQRDPVVAREIKALRAHGLRVALDDFGTGFASLTHLLTVPVDIIKIDKSFIDRLV 105
Query: 185 RHDASLAIVQGIIDIARKLDI 247
+ D SLAIV+G++ IARKL+I
Sbjct: 106 QGDPSLAIVEGLVGIARKLNI 126
>WP_056567249.1 EAL domain-containing protein [Mesorhizobium sp. Root172]
KRB29865.1 hypothetical protein ASE05_30120
[Mesorhizobium sp. Root172]
Length = 321
Score = 98.2 bits (243), Expect = 7e-23
Identities = 50/81 (61%), Positives = 64/81 (79%)
Frame = +2
Query: 5 ETFSIGCRNGDVDRVVERLRASGIRVALDDFGTGHASLTHLLNVPVDAIKIDQTFVARLK 184
E+ +G R+ V R ++ LRA G+RVALDDFGTG ASLTHLL VPVD +KID++F+ RL
Sbjct: 174 ESVYLGQRDPVVAREIKALRAHGLRVALDDFGTGFASLTHLLTVPVDIVKIDKSFIDRLV 233
Query: 185 RHDASLAIVQGIIDIARKLDI 247
+ D SLAIV+G++ IARKLDI
Sbjct: 234 QGDPSLAIVEGLVGIARKLDI 254
>ODT43330.1 diguanylate cyclase [Methylobacterium sp. SCN 67-24]
Length = 629
Score = 99.4 bits (246), Expect = 2e-22
Identities = 51/76 (67%), Positives = 62/76 (81%)
Frame = +2
Query: 20 GCRNGDVDRVVERLRASGIRVALDDFGTGHASLTHLLNVPVDAIKIDQTFVARLKRHDAS 199
G R+ V R +E +RA+G+ VALDDFGTG+ASLTHLLNVPVD IKIDQ FVARL D S
Sbjct: 475 GRRDRVVAREIEAVRAAGVLVALDDFGTGYASLTHLLNVPVDIIKIDQAFVARLWPDDPS 534
Query: 200 LAIVQGIIDIARKLDI 247
+ IV+G+IDIAR+L+I
Sbjct: 535 MVIVEGLIDIARRLNI 550
>WP_076745472.1 diguanylate cyclase [Sphingomonas sp. G39]
Length = 601
Score = 99.0 bits (245), Expect = 2e-22
Identities = 53/82 (64%), Positives = 63/82 (76%), Gaps = 2/82 (2%)
Frame = +2
Query: 8 TFSIGCRNGD--VDRVVERLRASGIRVALDDFGTGHASLTHLLNVPVDAIKIDQTFVARL 181
T S+ +GD V + +E LRA G+RVALDDFGTG+ASLTHLL VPVD IKID+TFV RL
Sbjct: 455 TESVYMGDGDRTVQKAIETLRAKGLRVALDDFGTGYASLTHLLTVPVDIIKIDKTFVDRL 514
Query: 182 KRHDASLAIVQGIIDIARKLDI 247
DAS AI++G+I IA KLDI
Sbjct: 515 AAGDASTAIIEGLISIADKLDI 536
>WP_033838935.1 bifunctional diguanylate cyclase/phosphodiesterase [Mesorhizobium
loti]
Length = 612
Score = 99.0 bits (245), Expect = 2e-22
Identities = 53/82 (64%), Positives = 65/82 (79%), Gaps = 2/82 (2%)
Frame = +2
Query: 8 TFSIGCRNGD--VDRVVERLRASGIRVALDDFGTGHASLTHLLNVPVDAIKIDQTFVARL 181
T SI GD V R ++ LRA G+R+ALDDFGTG ASLTHLL +PVD IKIDQ+FV+RL
Sbjct: 457 TESIYLGKGDPLVARELKALRAHGLRIALDDFGTGFASLTHLLTIPVDIIKIDQSFVSRL 516
Query: 182 KRHDASLAIVQGIIDIARKLDI 247
+ D SLAIV+G+I+IARKLD+
Sbjct: 517 VQGDPSLAIVEGLIEIARKLDV 538
>ONF95160.1 Phytochrome-like protein cph2 [Sphingomonas sp. G39]
Length = 617
Score = 99.0 bits (245), Expect = 2e-22
Identities = 53/82 (64%), Positives = 63/82 (76%), Gaps = 2/82 (2%)
Frame = +2
Query: 8 TFSIGCRNGD--VDRVVERLRASGIRVALDDFGTGHASLTHLLNVPVDAIKIDQTFVARL 181
T S+ +GD V + +E LRA G+RVALDDFGTG+ASLTHLL VPVD IKID+TFV RL
Sbjct: 471 TESVYMGDGDRTVQKAIETLRAKGLRVALDDFGTGYASLTHLLTVPVDIIKIDKTFVDRL 530
Query: 182 KRHDASLAIVQGIIDIARKLDI 247
DAS AI++G+I IA KLDI
Sbjct: 531 AAGDASTAIIEGLISIADKLDI 552
>WP_038358085.1 GGDEF domain-containing protein [Bosea sp. UNC402CLCol]
Length = 601
Score = 96.3 bits (238), Expect = 2e-21
Identities = 49/81 (60%), Positives = 62/81 (76%)
Frame = +2
Query: 5 ETFSIGCRNGDVDRVVERLRASGIRVALDDFGTGHASLTHLLNVPVDAIKIDQTFVARLK 184
E+ +G + V R ++ LR G+RVALDDFGTG ASLTHLL P+D IKID++F+ RL
Sbjct: 457 ESVYLGQHDPVVAREIKALRGYGLRVALDDFGTGFASLTHLLTAPIDIIKIDKSFIDRLA 516
Query: 185 RHDASLAIVQGIIDIARKLDI 247
+ D SLAIV+G+IDIARKLDI
Sbjct: 517 QGDPSLAIVEGLIDIARKLDI 537
>WP_027054546.1 GGDEF domain-containing protein [Mesorhizobium erdmanii]
Length = 615
Score = 95.9 bits (237), Expect = 3e-21
Identities = 49/81 (60%), Positives = 63/81 (77%)
Frame = +2
Query: 5 ETFSIGCRNGDVDRVVERLRASGIRVALDDFGTGHASLTHLLNVPVDAIKIDQTFVARLK 184
E+ +G R+ V R ++ LRA G+RVALDDFGTG ASLTHLL VPVD +KID++F+ RL
Sbjct: 468 ESVYLGQRDPVVAREIKALRAHGLRVALDDFGTGFASLTHLLTVPVDIVKIDKSFIDRLV 527
Query: 185 RHDASLAIVQGIIDIARKLDI 247
+ D SLAIV+G++ IARKL I
Sbjct: 528 QGDPSLAIVEGLVGIARKLSI 548
>SFR97056.1 diguanylate cyclase/phosphodiesterase [Sphingomonas sp. S5-249]
Length = 621
Score = 95.5 bits (236), Expect = 4e-21
Identities = 49/70 (70%), Positives = 56/70 (80%)
Frame = +2
Query: 38 VDRVVERLRASGIRVALDDFGTGHASLTHLLNVPVDAIKIDQTFVARLKRHDASLAIVQG 217
V R +E LRA G+RVALDDFGTG ASLTHLL VPVD IKID++F+ RL +AS AIV G
Sbjct: 488 VQRAIEALRARGMRVALDDFGTGFASLTHLLTVPVDIIKIDKSFIDRLATSNASKAIVDG 547
Query: 218 IIDIARKLDI 247
+I IARKLDI
Sbjct: 548 LIQIARKLDI 557
>WP_051544291.1 GGDEF-domain containing protein [Roseomonas mucosa]
Length = 496
Score = 94.7 bits (234), Expect = 6e-21
Identities = 49/81 (60%), Positives = 62/81 (76%)
Frame = +2
Query: 5 ETFSIGCRNGDVDRVVERLRASGIRVALDDFGTGHASLTHLLNVPVDAIKIDQTFVARLK 184
E +G + V R +E LRA+G+RVALDDFGTG+ASLTHL+NVPVD IKID+ FVARL
Sbjct: 340 EDVYLGRNDRVVAREIEVLRAAGVRVALDDFGTGYASLTHLVNVPVDIIKIDRAFVARLW 399
Query: 185 RHDASLAIVQGIIDIARKLDI 247
D S IV+G+I+IAR+L +
Sbjct: 400 PDDPSTIIVEGLIEIARRLGV 420
>WP_069064200.1 GGDEF domain-containing protein [Sphingobium sp. RAC03]
Length = 612
Score = 94.7 bits (234), Expect = 7e-21
Identities = 47/77 (61%), Positives = 61/77 (79%)
Frame = +2
Query: 17 IGCRNGDVDRVVERLRASGIRVALDDFGTGHASLTHLLNVPVDAIKIDQTFVARLKRHDA 196
+G R+ + R + R+R++G+++ALDDFGTG ASLTHLL VPVD IKID++FVARL DA
Sbjct: 462 LGHRDNGIAREIARMRSNGLKIALDDFGTGFASLTHLLTVPVDIIKIDKSFVARLAPDDA 521
Query: 197 SLAIVQGIIDIARKLDI 247
S AIV+G+ IARKL I
Sbjct: 522 STAIVEGLFLIARKLGI 538
>OJH51533.1 diguanylate cyclase [Rhizobium pusense]
Length = 614
Score = 94.7 bits (234), Expect = 7e-21
Identities = 49/81 (60%), Positives = 62/81 (76%)
Frame = +2
Query: 5 ETFSIGCRNGDVDRVVERLRASGIRVALDDFGTGHASLTHLLNVPVDAIKIDQTFVARLK 184
E +G + V R +E LRA+G+RVALDDFGTG+ASLTHL+NVPVD IKID+ FVARL
Sbjct: 458 EDVYLGRNDRVVAREIEVLRAAGVRVALDDFGTGYASLTHLVNVPVDIIKIDRAFVARLW 517
Query: 185 RHDASLAIVQGIIDIARKLDI 247
D S IV+G+I+IAR+L +
Sbjct: 518 PDDPSTIIVEGLIEIARRLGV 538