BLASTX nr result
ID: Glycyrrhiza35_contig00026142
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza35_contig00026142
(289 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
GAU19200.1 hypothetical protein TSUD_198830 [Trifolium subterran... 154 4e-45
XP_013442824.1 hypothetical protein MTR_0082s0080 [Medicago trun... 110 4e-31
CAN71466.1 hypothetical protein VITISV_038987 [Vitis vinifera] 104 6e-25
YP_009242008.1 NADH dehydrogenase subunit 4 (mitochondrion) [Ory... 80 2e-22
YP_009242020.1 NADH dehydrogenase subunit 4 (mitochondrion) [Ory... 80 2e-22
KYP78096.1 hypothetical protein KK1_048934 [Cajanus cajan] 89 2e-21
XP_016435338.1 PREDICTED: NADH dehydrogenase [ubiquinone] iron-s... 89 5e-20
YP_717160.1 hypothetical protein BrnapMp063 [Brassica napus] YP_... 69 2e-14
CDY17100.1 BnaC06g00330D [Brassica napus] 69 2e-13
EEF27701.1 NADH-ubiquinone oxidoreductase chain, putative [Ricin... 69 1e-11
CDY67692.1 BnaUnng02390D [Brassica napus] 62 2e-09
CDY67014.1 BnaUnng01810D, partial [Brassica napus] 62 5e-09
XP_013688462.1 PREDICTED: 2-C-methyl-D-erythritol 2,4-cyclodipho... 58 6e-08
GAU38270.1 hypothetical protein TSUD_119510 [Trifolium subterran... 55 7e-08
CDX92754.1 BnaC07g40120D [Brassica napus] 43 7e-08
CDY67547.1 BnaAnng24650D, partial [Brassica napus] 43 7e-08
>GAU19200.1 hypothetical protein TSUD_198830 [Trifolium subterraneum]
Length = 236
Score = 154 bits (388), Expect = 4e-45
Identities = 72/74 (97%), Positives = 73/74 (98%)
Frame = +2
Query: 53 FFCAARSRWTGHVLAVGSMVPKVTSVRQFRLNSSLYVSGPTLQVGPGLCALSFCVGRCRG 232
FFCA RSRWTGHVLAVGSMVPKVTSVRQFRLNSSLYVSGPTLQVGPGLCALSFCVGRCRG
Sbjct: 163 FFCAERSRWTGHVLAVGSMVPKVTSVRQFRLNSSLYVSGPTLQVGPGLCALSFCVGRCRG 222
Query: 233 EKGMRRGGEQQKHN 274
EKGMRRGGEQQ+HN
Sbjct: 223 EKGMRRGGEQQQHN 236
>XP_013442824.1 hypothetical protein MTR_0082s0080 [Medicago truncatula] KEH16849.1
hypothetical protein MTR_0082s0080 [Medicago truncatula]
Length = 185
Score = 110 bits (275), Expect(2) = 4e-31
Identities = 51/51 (100%), Positives = 51/51 (100%)
Frame = -2
Query: 153 EELSLNWRTEVTFGTILPTANTCPVQRERAAQKNVSCYTESPAGHRGPSGK 1
EELSLNWRTEVTFGTILPTANTCPVQRERAAQKNVSCYTESPAGHRGPSGK
Sbjct: 62 EELSLNWRTEVTFGTILPTANTCPVQRERAAQKNVSCYTESPAGHRGPSGK 112
Score = 51.6 bits (122), Expect(2) = 4e-31
Identities = 24/29 (82%), Positives = 25/29 (86%)
Frame = -3
Query: 287 KPKCSCVFVVRRLDAFPSLPGIVPHRKKE 201
K K SCV VVRRLDAFPSLP IVPHRKK+
Sbjct: 33 KKKYSCVVVVRRLDAFPSLPDIVPHRKKD 61
>CAN71466.1 hypothetical protein VITISV_038987 [Vitis vinifera]
Length = 325
Score = 104 bits (259), Expect = 6e-25
Identities = 58/95 (61%), Positives = 60/95 (63%)
Frame = -1
Query: 289 KSQNVVVFLLFAASTHSLLSPASSHTERKSAEPRPDL*CRSANVKRGVEPELANRSHFRN 110
KSQNVVV LLFAASTHSLLSPASSHTERKSAEPRPDL
Sbjct: 86 KSQNVVVLLLFAASTHSLLSPASSHTERKSAEPRPDL----------------------- 122
Query: 109 HTSYS*HVSSPAGTRSAKKRKLLYRIPRWPSGTEW 5
PAGTRSA +R+LLYRIPRWPSGTEW
Sbjct: 123 ----------PAGTRSANERELLYRIPRWPSGTEW 147
>YP_009242008.1 NADH dehydrogenase subunit 4 (mitochondrion) [Oryza minuta]
AMQ23370.1 NADH dehydrogenase subunit 4 (mitochondrion)
[Oryza minuta]
Length = 2992
Score = 80.1 bits (196), Expect(2) = 2e-22
Identities = 40/45 (88%), Positives = 42/45 (93%)
Frame = -3
Query: 137 TGEPKSLSEPYFLQLTRVQSSGNAQRKKT*AAIPNPPLAIGDRVV 3
TGEPKSLS PYFLQLTRV+SSGNAQRK+T AAIPNPPLAIGD VV
Sbjct: 1002 TGEPKSLSLPYFLQLTRVRSSGNAQRKRTSAAIPNPPLAIGDLVV 1046
Score = 53.1 bits (126), Expect(2) = 2e-22
Identities = 28/37 (75%), Positives = 29/37 (78%)
Frame = -1
Query: 289 KSQNVVVFLLFAASTHSLLSPASSHTERKSAEPRPDL 179
K +VV LLFAASTHS PASSHTERKS EPRPDL
Sbjct: 956 KQMYLVVLLLFAASTHS---PASSHTERKSVEPRPDL 989
>YP_009242020.1 NADH dehydrogenase subunit 4 (mitochondrion) [Oryza minuta]
AMQ23374.1 NADH dehydrogenase subunit 4 (mitochondrion)
[Oryza minuta]
Length = 2992
Score = 80.1 bits (196), Expect(2) = 2e-22
Identities = 40/45 (88%), Positives = 42/45 (93%)
Frame = -3
Query: 137 TGEPKSLSEPYFLQLTRVQSSGNAQRKKT*AAIPNPPLAIGDRVV 3
TGEPKSLS PYFLQLTRV+SSGNAQRK+T AAIPNPPLAIGD VV
Sbjct: 1002 TGEPKSLSLPYFLQLTRVRSSGNAQRKRTSAAIPNPPLAIGDLVV 1046
Score = 52.8 bits (125), Expect(2) = 2e-22
Identities = 28/37 (75%), Positives = 29/37 (78%)
Frame = -1
Query: 289 KSQNVVVFLLFAASTHSLLSPASSHTERKSAEPRPDL 179
K +VV LLFAASTHS PASSHTERKS EPRPDL
Sbjct: 956 KQMLLVVLLLFAASTHS---PASSHTERKSVEPRPDL 989
>KYP78096.1 hypothetical protein KK1_048934 [Cajanus cajan]
Length = 88
Score = 89.4 bits (220), Expect = 2e-21
Identities = 45/71 (63%), Positives = 50/71 (70%)
Frame = +2
Query: 77 WTGHVLAVGSMVPKVTSVRQFRLNSSLYVSGPTLQVGPGLCALSFCVGRCRGEKGMRRGG 256
W H + G + +S+R F L P LQVGPGLCALSFCVGRCRGEKGMRRGG
Sbjct: 10 WPYHSVPDGQRGIRYSSLRFFALRV------PALQVGPGLCALSFCVGRCRGEKGMRRGG 63
Query: 257 EQQKHNYILAF 289
EQQ+HNYILAF
Sbjct: 64 EQQQHNYILAF 74
Score = 55.1 bits (131), Expect = 6e-08
Identities = 25/25 (100%), Positives = 25/25 (100%)
Frame = +3
Query: 3 YHSVPDGQRGIRYSSLRFFALRVPA 77
YHSVPDGQRGIRYSSLRFFALRVPA
Sbjct: 12 YHSVPDGQRGIRYSSLRFFALRVPA 36
>XP_016435338.1 PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein
2-like [Nicotiana tabacum]
Length = 201
Score = 89.0 bits (219), Expect = 5e-20
Identities = 53/90 (58%), Positives = 56/90 (62%)
Frame = +1
Query: 19 MASGGFGIAAYVFLRCAFPLDWTRVSCRKYGSESDFGSPVQAQLLALR*RTYTTGRAGAL 198
MASG F IAA V LRCAF LDWT VSCRKYG ESDFGSPVQAQLLAL
Sbjct: 1 MASGRFSIAAQVHLRCAFLLDWTHVSCRKYGYESDFGSPVQAQLLAL------------- 47
Query: 199 RSFFLCGTMPGREGNASRRRTTKTQLHFGF 288
+EGNASRR+T QL+FGF
Sbjct: 48 ----------WKEGNASRRQT--RQLNFGF 65
>YP_717160.1 hypothetical protein BrnapMp063 [Brassica napus] YP_004927459.1
orf116 (mitochondrion) [Brassica oleracea]
YP_004927573.1 orf116 (mitochondrion) [Brassica
carinata] YP_004927875.1 orf116 (mitochondrion)
[Brassica rapa subsp. oleifera] YP_004927778.1 orf116
(mitochondrion) [Brassica juncea] YP_009228114.1
hypothetical protein AYB38_gp34 (mitochondrion)
[Brassica nigra] BAC98909.1 hypothetical protein
(mitochondrion) [Brassica napus] AEH43448.1 orf116
(mitochondrion) [Brassica rapa subsp. oleifera]
AEH43487.1 orf116 (mitochondrion) [Brassica oleracea]
AEH43588.1 orf116 (mitochondrion) [Brassica carinata]
AEH43672.1 orf116 (mitochondrion) [Brassica juncea]
CBX48376.1 unnamed protein product [Brassica napus]
AEX57680.1 hypothetical protein RasatMp049
(mitochondrion) [Raphanus sativus] AGC81678.1
hypothetical protein DCGMS_00180 (mitochondrion)
[Raphanus sativus] AHY20358.1 hypothetical protein
(mitochondrion) (mitochondrion) [Brassica juncea var.
tumida] AIE42596.1 hypothetical protein RadishMT_p066
(mitochondrion) [Raphanus sativus] AIZ06204.1
hypothetical protein (mitochondrion) [Brassica napus]
AIZ06279.1 hypothetical protein (mitochondrion)
[Brassica napus] AJD85466.1 hypothetical protein
BniMp044 (mitochondrion) [Brassica nigra] AKD00221.1
hypothetical protein (mitochondrion) [Brassica napus]
Length = 116
Score = 65.9 bits (159), Expect(2) = 2e-14
Identities = 39/67 (58%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
Frame = +2
Query: 74 RWTGHVLAVGSMVPKVTSVRQFRLNSSLYVSGPTLQVG-PGLCALSFCVGRCRGEKGMRR 250
R TGH+LAVGSMVPKVTSVRQFRLNSSLYVSGP + G P L + G RR
Sbjct: 34 RRTGHMLAVGSMVPKVTSVRQFRLNSSLYVSGPMARAGAPRSFFLCGTMPGREGNASRRR 93
Query: 251 GGEQQKH 271
+Q H
Sbjct: 94 TTTRQLH 100
Score = 40.4 bits (93), Expect(2) = 2e-14
Identities = 18/20 (90%), Positives = 18/20 (90%)
Frame = +3
Query: 3 YHSVPDGQRGIRYSSLRFFA 62
YHSVPDGQRGIRYSS R FA
Sbjct: 12 YHSVPDGQRGIRYSSSRSFA 31
Score = 68.9 bits (167), Expect = 5e-13
Identities = 32/35 (91%), Positives = 32/35 (91%)
Frame = +1
Query: 184 RAGALRSFFLCGTMPGREGNASRRRTTKTQLHFGF 288
RAGA RSFFLCGTMPGREGNASRRRTT QLHFGF
Sbjct: 69 RAGAPRSFFLCGTMPGREGNASRRRTTTRQLHFGF 103
>CDY17100.1 BnaC06g00330D [Brassica napus]
Length = 81
Score = 68.9 bits (167), Expect = 2e-13
Identities = 32/35 (91%), Positives = 32/35 (91%)
Frame = +1
Query: 184 RAGALRSFFLCGTMPGREGNASRRRTTKTQLHFGF 288
RAGA RSFFLCGTMPGREGNASRRRTT QLHFGF
Sbjct: 34 RAGAPRSFFLCGTMPGREGNASRRRTTTRQLHFGF 68
Score = 58.9 bits (141), Expect = 2e-09
Identities = 35/63 (55%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Frame = +2
Query: 86 HVLAVGSMVPKVTSVRQFRLNSSLYVSGPTLQVG-PGLCALSFCVGRCRGEKGMRRGGEQ 262
H+LAVGSMVPKVTSVR FRLNSSLYVSGP + G P L + G RR +
Sbjct: 3 HMLAVGSMVPKVTSVRHFRLNSSLYVSGPMARAGAPRSFFLCGTMPGREGNASRRRTTTR 62
Query: 263 QKH 271
Q H
Sbjct: 63 QLH 65
>EEF27701.1 NADH-ubiquinone oxidoreductase chain, putative [Ricinus communis]
Length = 366
Score = 68.9 bits (167), Expect = 1e-11
Identities = 34/37 (91%), Positives = 35/37 (94%)
Frame = -1
Query: 289 KSQNVVVFLLFAASTHSLLSPASSHTERKSAEPRPDL 179
K +NVVV LLFAASTHSLLSPASSHTERKSAEPRPDL
Sbjct: 330 KRKNVVVLLLFAASTHSLLSPASSHTERKSAEPRPDL 366
>CDY67692.1 BnaUnng02390D [Brassica napus]
Length = 228
Score = 61.6 bits (148), Expect = 2e-09
Identities = 27/29 (93%), Positives = 28/29 (96%)
Frame = -3
Query: 287 KPKCSCVFVVRRLDAFPSLPGIVPHRKKE 201
KPKCSC+ VVRRLDAFPSLPGIVPHRKKE
Sbjct: 67 KPKCSCLVVVRRLDAFPSLPGIVPHRKKE 95
>CDY67014.1 BnaUnng01810D, partial [Brassica napus]
Length = 451
Score = 61.6 bits (148), Expect = 5e-09
Identities = 27/29 (93%), Positives = 28/29 (96%)
Frame = -3
Query: 287 KPKCSCVFVVRRLDAFPSLPGIVPHRKKE 201
KPKCSC+ VVRRLDAFPSLPGIVPHRKKE
Sbjct: 86 KPKCSCLVVVRRLDAFPSLPGIVPHRKKE 114
>XP_013688462.1 PREDICTED: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase,
chloroplastic-like isoform X1 [Brassica napus]
Length = 282
Score = 58.2 bits (139), Expect = 6e-08
Identities = 27/45 (60%), Positives = 33/45 (73%)
Frame = +2
Query: 80 TGHVLAVGSMVPKVTSVRQFRLNSSLYVSGPTLQVGPGLCALSFC 214
TGH+L VG+MVPK+TSVRQFRLNS LYVSGP + ++C
Sbjct: 231 TGHILDVGNMVPKLTSVRQFRLNSMLYVSGPMVPTKGNTRIFTYC 275
>GAU38270.1 hypothetical protein TSUD_119510 [Trifolium subterraneum]
Length = 77
Score = 54.7 bits (130), Expect = 7e-08
Identities = 30/54 (55%), Positives = 32/54 (59%), Gaps = 13/54 (24%)
Frame = +3
Query: 153 RFTLADLHYRSGRGS-------------ALFLSVWDDAGERRECVEAANNKNTT 275
R T A +H +GS LFLSVWDDAGERRECVEAANN NTT
Sbjct: 14 RVTSAFMHLNGFQGSMQNQAQVFVRLKKCLFLSVWDDAGERRECVEAANNNNTT 67
>CDX92754.1 BnaC07g40120D [Brassica napus]
Length = 66
Score = 43.1 bits (100), Expect(2) = 7e-08
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = +2
Query: 113 PKVTSVRQFRLNSSLYVSGP 172
PKVTSVRQFRLNSSLYVSGP
Sbjct: 11 PKVTSVRQFRLNSSLYVSGP 30
Score = 40.8 bits (94), Expect(2) = 7e-08
Identities = 21/28 (75%), Positives = 21/28 (75%)
Frame = +1
Query: 184 RAGALRSFFLCGTMPGREGNASRRRTTK 267
RA A RSFFLCGTM RE NASRRR K
Sbjct: 33 RARAPRSFFLCGTMSERERNASRRRYMK 60
>CDY67547.1 BnaAnng24650D, partial [Brassica napus]
Length = 60
Score = 43.1 bits (100), Expect(2) = 7e-08
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = +2
Query: 113 PKVTSVRQFRLNSSLYVSGP 172
PKVTSVRQFRLNSSLYVSGP
Sbjct: 5 PKVTSVRQFRLNSSLYVSGP 24
Score = 40.8 bits (94), Expect(2) = 7e-08
Identities = 21/28 (75%), Positives = 21/28 (75%)
Frame = +1
Query: 184 RAGALRSFFLCGTMPGREGNASRRRTTK 267
RA A RSFFLCGTM RE NASRRR K
Sbjct: 27 RARAPRSFFLCGTMSERERNASRRRYMK 54