BLASTX nr result

ID: Glycyrrhiza35_contig00026115 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza35_contig00026115
         (229 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_012574775.1 PREDICTED: pentatricopeptide repeat-containing pr...    70   2e-12
XP_013453260.1 PPR containing protein [Medicago truncatula] KEH2...    64   2e-10
XP_016181926.1 PREDICTED: pentatricopeptide repeat-containing pr...    59   3e-08
XP_016181924.1 PREDICTED: pentatricopeptide repeat-containing pr...    59   3e-08
XP_015947075.1 PREDICTED: pentatricopeptide repeat-containing pr...    56   2e-07
GAV62537.1 PPR domain-containing protein/PPR_2 domain-containing...    53   3e-06
XP_006583750.1 PREDICTED: pentatricopeptide repeat-containing pr...    45   7e-06
KHN35765.1 Pentatricopeptide repeat-containing protein [Glycine ...    45   7e-06
CBI28142.3 unnamed protein product, partial [Vitis vinifera]           52   8e-06
XP_002281719.2 PREDICTED: pentatricopeptide repeat-containing pr...    52   8e-06

>XP_012574775.1 PREDICTED: pentatricopeptide repeat-containing protein At1g31430
           [Cicer arietinum] XP_012574776.1 PREDICTED:
           pentatricopeptide repeat-containing protein At1g31430
           [Cicer arietinum] XP_012574777.1 PREDICTED:
           pentatricopeptide repeat-containing protein At1g31430
           [Cicer arietinum] XP_012574778.1 PREDICTED:
           pentatricopeptide repeat-containing protein At1g31430
           [Cicer arietinum] XP_012574779.1 PREDICTED:
           pentatricopeptide repeat-containing protein At1g31430
           [Cicer arietinum] XP_012574780.1 PREDICTED:
           pentatricopeptide repeat-containing protein At1g31430
           [Cicer arietinum] XP_012574781.1 PREDICTED:
           pentatricopeptide repeat-containing protein At1g31430
           [Cicer arietinum] XP_012574782.1 PREDICTED:
           pentatricopeptide repeat-containing protein At1g31430
           [Cicer arietinum]
          Length = 605

 Score = 70.1 bits (170), Expect = 2e-12
 Identities = 33/40 (82%), Positives = 36/40 (90%)
 Frame = -3

Query: 227 KVRSKMKDLGIRKVPGCSAIEVDGISNRVEVGALSHFRTK 108
           K RSKMKDL I+KVPGCSAIEVDGI N+VEVG LSHFRT+
Sbjct: 558 KTRSKMKDLHIKKVPGCSAIEVDGIGNKVEVGDLSHFRTR 597


>XP_013453260.1 PPR containing protein [Medicago truncatula] KEH27289.1 PPR
           containing protein [Medicago truncatula]
          Length = 608

 Score = 64.3 bits (155), Expect = 2e-10
 Identities = 33/45 (73%), Positives = 35/45 (77%)
 Frame = -3

Query: 227 KVRSKMKDLGIRKVPGCSAIEVDGISNRVEVGALSHFRTKIGLHT 93
           K RSKMKDL IRKVPGCSAIEVDG  N+  VG  S FR+KIGL T
Sbjct: 564 KTRSKMKDLHIRKVPGCSAIEVDGSGNQGGVGDFSSFRSKIGLPT 608


>XP_016181926.1 PREDICTED: pentatricopeptide repeat-containing protein At1g31430
           isoform X2 [Arachis ipaensis]
          Length = 604

 Score = 58.5 bits (140), Expect = 3e-08
 Identities = 30/45 (66%), Positives = 35/45 (77%)
 Frame = -3

Query: 227 KVRSKMKDLGIRKVPGCSAIEVDGISNRVEVGALSHFRTKIGLHT 93
           KVRSKMKD+GI+KVPGCSAIEV+G  N+    +LSHF   IGL T
Sbjct: 562 KVRSKMKDMGIKKVPGCSAIEVNG--NKGTAWSLSHFTANIGLPT 604


>XP_016181924.1 PREDICTED: pentatricopeptide repeat-containing protein At1g31430
           isoform X1 [Arachis ipaensis] XP_016181925.1 PREDICTED:
           pentatricopeptide repeat-containing protein At1g31430
           isoform X1 [Arachis ipaensis]
          Length = 613

 Score = 58.5 bits (140), Expect = 3e-08
 Identities = 30/45 (66%), Positives = 35/45 (77%)
 Frame = -3

Query: 227 KVRSKMKDLGIRKVPGCSAIEVDGISNRVEVGALSHFRTKIGLHT 93
           KVRSKMKD+GI+KVPGCSAIEV+G  N+    +LSHF   IGL T
Sbjct: 571 KVRSKMKDMGIKKVPGCSAIEVNG--NKGTAWSLSHFTANIGLPT 613


>XP_015947075.1 PREDICTED: pentatricopeptide repeat-containing protein At1g31430
           [Arachis duranensis]
          Length = 612

 Score = 56.2 bits (134), Expect = 2e-07
 Identities = 29/45 (64%), Positives = 34/45 (75%)
 Frame = -3

Query: 227 KVRSKMKDLGIRKVPGCSAIEVDGISNRVEVGALSHFRTKIGLHT 93
           KVRSKMKD+GI+KVPGCSAIEV+G  N+    +LSHF    GL T
Sbjct: 570 KVRSKMKDMGIKKVPGCSAIEVNG--NKGTAWSLSHFTANSGLPT 612


>GAV62537.1 PPR domain-containing protein/PPR_2 domain-containing protein
           [Cephalotus follicularis]
          Length = 584

 Score = 52.8 bits (125), Expect = 3e-06
 Identities = 24/36 (66%), Positives = 29/36 (80%)
 Frame = -3

Query: 227 KVRSKMKDLGIRKVPGCSAIEVDGISNRVEVGALSH 120
           KVR KMKDLG++KVPGCS+IE+DGI +   VG  SH
Sbjct: 522 KVRRKMKDLGVKKVPGCSSIEIDGIVHEFLVGDPSH 557


>XP_006583750.1 PREDICTED: pentatricopeptide repeat-containing protein
           At1g31430-like [Glycine max] KRH49706.1 hypothetical
           protein GLYMA_07G173900 [Glycine max] KRH49707.1
           hypothetical protein GLYMA_07G173900 [Glycine max]
          Length = 621

 Score = 45.1 bits (105), Expect(2) = 7e-06
 Identities = 21/24 (87%), Positives = 23/24 (95%)
 Frame = -3

Query: 227 KVRSKMKDLGIRKVPGCSAIEVDG 156
           KVR+KMKDLGI+KVPG SAIEVDG
Sbjct: 575 KVRNKMKDLGIKKVPGYSAIEVDG 598



 Score = 32.0 bits (71), Expect(2) = 7e-06
 Identities = 15/26 (57%), Positives = 17/26 (65%)
 Frame = -2

Query: 165 GGWH*QQS*SWGPFPFSDQNWSAYTG 88
           G W  QQ  S GPFPF D+NWS+  G
Sbjct: 598 GKW--QQRLSEGPFPFPDKNWSSCRG 621


>KHN35765.1 Pentatricopeptide repeat-containing protein [Glycine soja]
          Length = 568

 Score = 45.1 bits (105), Expect(2) = 7e-06
 Identities = 21/24 (87%), Positives = 23/24 (95%)
 Frame = -3

Query: 227 KVRSKMKDLGIRKVPGCSAIEVDG 156
           KVR+KMKDLGI+KVPG SAIEVDG
Sbjct: 522 KVRNKMKDLGIKKVPGYSAIEVDG 545



 Score = 32.0 bits (71), Expect(2) = 7e-06
 Identities = 15/26 (57%), Positives = 17/26 (65%)
 Frame = -2

Query: 165 GGWH*QQS*SWGPFPFSDQNWSAYTG 88
           G W  QQ  S GPFPF D+NWS+  G
Sbjct: 545 GKW--QQRLSEGPFPFPDKNWSSCRG 568


>CBI28142.3 unnamed protein product, partial [Vitis vinifera]
          Length = 571

 Score = 51.6 bits (122), Expect = 8e-06
 Identities = 23/36 (63%), Positives = 29/36 (80%)
 Frame = -3

Query: 227 KVRSKMKDLGIRKVPGCSAIEVDGISNRVEVGALSH 120
           KVR KMKDLG++KVPGCS++EV+GI +   VG  SH
Sbjct: 501 KVRRKMKDLGVKKVPGCSSVEVNGIVHEFLVGDASH 536


>XP_002281719.2 PREDICTED: pentatricopeptide repeat-containing protein At1g31430
           [Vitis vinifera]
          Length = 662

 Score = 51.6 bits (122), Expect = 8e-06
 Identities = 23/36 (63%), Positives = 29/36 (80%)
 Frame = -3

Query: 227 KVRSKMKDLGIRKVPGCSAIEVDGISNRVEVGALSH 120
           KVR KMKDLG++KVPGCS++EV+GI +   VG  SH
Sbjct: 592 KVRRKMKDLGVKKVPGCSSVEVNGIVHEFLVGDASH 627


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