BLASTX nr result
ID: Glycyrrhiza35_contig00026005
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza35_contig00026005
(328 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
NP_395469.1 putative reverse transcriptase [Blueberry red ringsp... 89 1e-18
AEQ49589.1 reverse transcriptase [Blueberry red ringspot virus] 89 1e-18
AEQ38577.1 reverse transcriptase [Blueberry red ringspot virus] 89 1e-18
AEH95573.1 reverse transcriptase [Blueberry red ringspot virus] 89 1e-18
AEE01492.1 reverse transcriptase [Blueberry red ringspot virus] 89 2e-18
NP_861410.1 putative multifunctional pol protein [Cestrum yellow... 86 2e-17
Q02964.1 RecName: Full=Enzymatic polyprotein; Includes: RecName:... 86 2e-17
YP_009254008.1 putative aspartic protease [Water chestnut soymov... 84 1e-16
CAD79320.2 polyprotein, partial [Carnation etched ring virus] 81 1e-16
BAO53386.1 reverse transcriptase [Cauliflower mosaic virus] 83 2e-16
APG80689.1 reverse transcriptase [Cauliflower mosaic virus] 83 2e-16
BAO53421.1 reverse transcriptase [Cauliflower mosaic virus] 83 2e-16
BAO53407.1 reverse transcriptase [Cauliflower mosaic virus] 83 2e-16
BAO53379.1 reverse transcriptase [Cauliflower mosaic virus] BAO5... 83 2e-16
BAO53372.1 reverse transcriptase [Cauliflower mosaic virus] 83 2e-16
BAO53365.1 reverse transcriptase [Cauliflower mosaic virus] 83 2e-16
P03555.1 RecName: Full=Enzymatic polyprotein; Includes: RecName:... 83 2e-16
NP_056728.1 reverse transcriptase [Cauliflower mosaic virus] P03... 83 2e-16
AFI61742.1 reverse transcriptase [Cauliflower mosaic virus] 83 2e-16
AAA21736.1 reverse transcriptase [Cauliflower mosaic virus] 83 2e-16
>NP_395469.1 putative reverse transcriptase [Blueberry red ringspot virus]
AAL13274.1 putative reverse transcriptase [Blueberry red
ringspot virus]
Length = 657
Score = 89.4 bits (220), Expect = 1e-18
Identities = 43/96 (44%), Positives = 62/96 (64%), Gaps = 2/96 (2%)
Frame = -1
Query: 307 AYIDTGASICIATKALFDK--WEKVRNPARVSIADGSVHSLSWIAKKTGAYNLRKLFIIP 134
AYIDTGAS+C+ + K W++++ P + +AD ++ +A ++ F++P
Sbjct: 19 AYIDTGASLCLLPEYNLPKQLWKELKKPITIRVADKRELQINKVALMITILIEKRKFLVP 78
Query: 133 IIYQQQTGVDMILGNNFLRLYAPFCQYLDYMTLRTP 26
IYQ +GV MI+GNNFLRLY PFCQYL Y+TLR P
Sbjct: 79 TIYQFDSGVPMIIGNNFLRLYYPFCQYLSYITLRCP 114
>AEQ49589.1 reverse transcriptase [Blueberry red ringspot virus]
Length = 657
Score = 89.4 bits (220), Expect = 1e-18
Identities = 43/96 (44%), Positives = 62/96 (64%), Gaps = 2/96 (2%)
Frame = -1
Query: 307 AYIDTGASICIATKALFDK--WEKVRNPARVSIADGSVHSLSWIAKKTGAYNLRKLFIIP 134
AYIDTGAS+C+ + K W++++ P + +AD ++ +A ++ F++P
Sbjct: 19 AYIDTGASLCLLPEYNLPKLLWKELKKPITIRVADKRELQITKVALMITILIEKRKFLVP 78
Query: 133 IIYQQQTGVDMILGNNFLRLYAPFCQYLDYMTLRTP 26
IYQ +GV MI+GNNFLRLY PFCQYL Y+TLR P
Sbjct: 79 TIYQFDSGVPMIIGNNFLRLYYPFCQYLSYITLRCP 114
>AEQ38577.1 reverse transcriptase [Blueberry red ringspot virus]
Length = 657
Score = 89.4 bits (220), Expect = 1e-18
Identities = 43/96 (44%), Positives = 62/96 (64%), Gaps = 2/96 (2%)
Frame = -1
Query: 307 AYIDTGASICIATKALFDK--WEKVRNPARVSIADGSVHSLSWIAKKTGAYNLRKLFIIP 134
AYIDTGAS+C+ + K W++++ P + +AD ++ +A ++ F++P
Sbjct: 19 AYIDTGASLCLLPEYNLPKLLWKELKKPITIRVADKRELQITKVALMITILIEKRKFLVP 78
Query: 133 IIYQQQTGVDMILGNNFLRLYAPFCQYLDYMTLRTP 26
IYQ +GV MI+GNNFLRLY PFCQYL Y+TLR P
Sbjct: 79 TIYQFDSGVPMIIGNNFLRLYYPFCQYLSYITLRCP 114
>AEH95573.1 reverse transcriptase [Blueberry red ringspot virus]
Length = 667
Score = 89.4 bits (220), Expect = 1e-18
Identities = 43/96 (44%), Positives = 62/96 (64%), Gaps = 2/96 (2%)
Frame = -1
Query: 307 AYIDTGASICIATKALFDK--WEKVRNPARVSIADGSVHSLSWIAKKTGAYNLRKLFIIP 134
AYIDTGAS+C+ + K W++++ P + +AD ++ +A ++ F++P
Sbjct: 29 AYIDTGASLCLLPEYNLPKLLWKELKKPITIRVADKRELQITKVALMITILIEKRKFLVP 88
Query: 133 IIYQQQTGVDMILGNNFLRLYAPFCQYLDYMTLRTP 26
IYQ +GV MI+GNNFLRLY PFCQYL Y+TLR P
Sbjct: 89 TIYQFDSGVPMIIGNNFLRLYYPFCQYLSYITLRCP 124
>AEE01492.1 reverse transcriptase [Blueberry red ringspot virus]
Length = 680
Score = 89.4 bits (220), Expect = 2e-18
Identities = 43/96 (44%), Positives = 62/96 (64%), Gaps = 2/96 (2%)
Frame = -1
Query: 307 AYIDTGASICIATKALFDK--WEKVRNPARVSIADGSVHSLSWIAKKTGAYNLRKLFIIP 134
AYIDTGAS+C+ + K W++++ P + +AD ++ +A ++ F++P
Sbjct: 42 AYIDTGASLCLLPEYNLPKLLWKELKKPITIRVADKRELQITKVALMITIIIEKRKFLVP 101
Query: 133 IIYQQQTGVDMILGNNFLRLYAPFCQYLDYMTLRTP 26
IYQ +GV MI+GNNFLRLY PFCQYL Y+TLR P
Sbjct: 102 TIYQFDSGVPMIIGNNFLRLYYPFCQYLSYITLRCP 137
>NP_861410.1 putative multifunctional pol protein [Cestrum yellow leaf curling
virus] Q7TD08.1 RecName: Full=Enzymatic polyprotein;
Includes: RecName: Full=Aspartic protease; Includes:
RecName: Full=Endonuclease; Includes: RecName:
Full=Reverse transcriptase AAP78924.1 putative
multifunctional pol protein [Cestrum yellow leaf curling
virus]
Length = 643
Score = 86.3 bits (212), Expect = 2e-17
Identities = 42/100 (42%), Positives = 61/100 (61%)
Frame = -1
Query: 325 NDRETEAYIDTGASICIATKALFDKWEKVRNPARVSIADGSVHSLSWIAKKTGAYNLRKL 146
ND AY+DTGA+IC+A + KW K+ P ++SIAD SV + A+ +
Sbjct: 17 NDVFINAYVDTGATICLADPKIKLKWVKMEKPIKISIADKSVQEIWHRAEMVEIWIRNYK 76
Query: 145 FIIPIIYQQQTGVDMILGNNFLRLYAPFCQYLDYMTLRTP 26
F+ + Q+ +G+D ++GNNFLRLY PF Q L+Y+ LR P
Sbjct: 77 FVAATVCQKSSGMDFVIGNNFLRLYQPFIQGLNYIKLRAP 116
>Q02964.1 RecName: Full=Enzymatic polyprotein; Includes: RecName:
Full=Aspartic protease; Includes: RecName:
Full=Endonuclease; Includes: RecName: Full=Reverse
transcriptase AAA62375.1 reverse transcriptase
[Cauliflower mosaic virus]
Length = 679
Score = 85.9 bits (211), Expect = 2e-17
Identities = 40/92 (43%), Positives = 58/92 (63%), Gaps = 2/92 (2%)
Frame = -1
Query: 316 ETEAYIDTGASICIATKALF--DKWEKVRNPARVSIADGSVHSLSWIAKKTGAYNLRKLF 143
E ++DTGAS+CIA+K + + W P V IADGS ++S + K R++F
Sbjct: 39 ELHCFVDTGASLCIASKFVIPEEHWVNAERPIMVKIADGSSITISKVCKDIDLIIAREIF 98
Query: 142 IIPIIYQQQTGVDMILGNNFLRLYAPFCQYLD 47
IP +YQQ++G+D I+GNNF +LY PF Q+ D
Sbjct: 99 KIPTVYQQESGIDFIIGNNFCQLYEPFIQFTD 130
>YP_009254008.1 putative aspartic protease [Water chestnut soymovirus 1] AND65752.1
putative aspartic protease [Water chestnut soymovirus 1]
Length = 680
Score = 84.0 bits (206), Expect = 1e-16
Identities = 46/107 (42%), Positives = 66/107 (61%), Gaps = 7/107 (6%)
Frame = -1
Query: 307 AYIDTGASICIATKALFDK--WEKVRNPARVSIADGSVHSLSWIAKKTGAYNLRKL---- 146
AY+DTGA+ICI L DK W ++NP +V IA+ I K AYN+ L
Sbjct: 19 AYVDTGATICIIKPELLDKENWTDLKNPVQVKIANNKT-----IEIKNKAYNIGMLIENY 73
Query: 145 -FIIPIIYQQQTGVDMILGNNFLRLYAPFCQYLDYMTLRTPYIRGKQ 8
F+IP IY TG+ +I+GNNFL+LY PF Q ++ +TL+ P ++G++
Sbjct: 74 QFMIPSIYGFDTGLPLIIGNNFLKLYQPFIQTVETVTLKCPKLKGQK 120
>CAD79320.2 polyprotein, partial [Carnation etched ring virus]
Length = 215
Score = 80.9 bits (198), Expect = 1e-16
Identities = 35/92 (38%), Positives = 59/92 (64%), Gaps = 2/92 (2%)
Frame = -1
Query: 316 ETEAYIDTGASICIATKALFDK--WEKVRNPARVSIADGSVHSLSWIAKKTGAYNLRKLF 143
E Y+DTG+S+C+A+K + + W+ P + IA+G + L+ + K + F
Sbjct: 27 ELHCYVDTGSSLCMASKYVIPEEYWQTAEKPLNIKIANGKIIQLTKVCSKLPIRLGGERF 86
Query: 142 IIPIIYQQQTGVDMILGNNFLRLYAPFCQYLD 47
+IP ++QQ++G+D++LGNNF +LY+PF QY D
Sbjct: 87 LIPTLFQQESGIDLLLGNNFCQLYSPFIQYTD 118
>BAO53386.1 reverse transcriptase [Cauliflower mosaic virus]
Length = 678
Score = 83.2 bits (204), Expect = 2e-16
Identities = 39/92 (42%), Positives = 57/92 (61%), Gaps = 2/92 (2%)
Frame = -1
Query: 316 ETEAYIDTGASICIATKALF--DKWEKVRNPARVSIADGSVHSLSWIAKKTGAYNLRKLF 143
E ++DTGAS+CIA+K + + W P V IADGS ++S + K ++F
Sbjct: 39 ELHCFVDTGASLCIASKFVIPEEHWVNAERPIMVKIADGSSITISKVCKDIDLIIAGEIF 98
Query: 142 IIPIIYQQQTGVDMILGNNFLRLYAPFCQYLD 47
IP +YQQ++G+D I+GNNF +LY PF Q+ D
Sbjct: 99 KIPTVYQQESGIDFIIGNNFCQLYEPFIQFTD 130
>APG80689.1 reverse transcriptase [Cauliflower mosaic virus]
Length = 679
Score = 83.2 bits (204), Expect = 2e-16
Identities = 39/92 (42%), Positives = 57/92 (61%), Gaps = 2/92 (2%)
Frame = -1
Query: 316 ETEAYIDTGASICIATKALF--DKWEKVRNPARVSIADGSVHSLSWIAKKTGAYNLRKLF 143
E ++DTGAS+CIA+K + + W P V IADGS ++S + K ++F
Sbjct: 39 ELHCFVDTGASLCIASKFVIPEEHWVNAERPIMVKIADGSSITISKVCKDIDLIIAGEIF 98
Query: 142 IIPIIYQQQTGVDMILGNNFLRLYAPFCQYLD 47
IP +YQQ++G+D I+GNNF +LY PF Q+ D
Sbjct: 99 KIPTVYQQESGIDFIIGNNFCQLYEPFIQFTD 130
>BAO53421.1 reverse transcriptase [Cauliflower mosaic virus]
Length = 679
Score = 83.2 bits (204), Expect = 2e-16
Identities = 39/92 (42%), Positives = 57/92 (61%), Gaps = 2/92 (2%)
Frame = -1
Query: 316 ETEAYIDTGASICIATKALF--DKWEKVRNPARVSIADGSVHSLSWIAKKTGAYNLRKLF 143
E ++DTGAS+CIA+K + + W P V IADGS ++S + K ++F
Sbjct: 39 ELHCFVDTGASLCIASKFVIPEEHWVNAERPIMVKIADGSSITISKVCKDIDLIIAGEIF 98
Query: 142 IIPIIYQQQTGVDMILGNNFLRLYAPFCQYLD 47
IP +YQQ++G+D I+GNNF +LY PF Q+ D
Sbjct: 99 KIPTVYQQESGIDFIIGNNFCQLYEPFIQFTD 130
>BAO53407.1 reverse transcriptase [Cauliflower mosaic virus]
Length = 679
Score = 83.2 bits (204), Expect = 2e-16
Identities = 39/92 (42%), Positives = 57/92 (61%), Gaps = 2/92 (2%)
Frame = -1
Query: 316 ETEAYIDTGASICIATKALF--DKWEKVRNPARVSIADGSVHSLSWIAKKTGAYNLRKLF 143
E ++DTGAS+CIA+K + + W P V IADGS ++S + K ++F
Sbjct: 39 ELHCFVDTGASLCIASKFVIPEEHWVNAERPIMVKIADGSSITISKVCKDIDLIIAGEIF 98
Query: 142 IIPIIYQQQTGVDMILGNNFLRLYAPFCQYLD 47
IP +YQQ++G+D I+GNNF +LY PF Q+ D
Sbjct: 99 KIPTVYQQESGIDFIIGNNFCQLYEPFIQFTD 130
>BAO53379.1 reverse transcriptase [Cauliflower mosaic virus] BAO53414.1 reverse
transcriptase [Cauliflower mosaic virus]
Length = 679
Score = 83.2 bits (204), Expect = 2e-16
Identities = 39/92 (42%), Positives = 57/92 (61%), Gaps = 2/92 (2%)
Frame = -1
Query: 316 ETEAYIDTGASICIATKALF--DKWEKVRNPARVSIADGSVHSLSWIAKKTGAYNLRKLF 143
E ++DTGAS+CIA+K + + W P V IADGS ++S + K ++F
Sbjct: 39 ELHCFVDTGASLCIASKFVIPEEHWVNAERPIMVKIADGSSITISKVCKDIDLIIAGEIF 98
Query: 142 IIPIIYQQQTGVDMILGNNFLRLYAPFCQYLD 47
IP +YQQ++G+D I+GNNF +LY PF Q+ D
Sbjct: 99 KIPTVYQQESGIDFIIGNNFCQLYEPFIQFTD 130
>BAO53372.1 reverse transcriptase [Cauliflower mosaic virus]
Length = 679
Score = 83.2 bits (204), Expect = 2e-16
Identities = 39/92 (42%), Positives = 57/92 (61%), Gaps = 2/92 (2%)
Frame = -1
Query: 316 ETEAYIDTGASICIATKALF--DKWEKVRNPARVSIADGSVHSLSWIAKKTGAYNLRKLF 143
E ++DTGAS+CIA+K + + W P V IADGS ++S + K ++F
Sbjct: 39 ELHCFVDTGASLCIASKFVIPEEHWVNAERPIMVKIADGSSITISKVCKDIDLIIAGEIF 98
Query: 142 IIPIIYQQQTGVDMILGNNFLRLYAPFCQYLD 47
IP +YQQ++G+D I+GNNF +LY PF Q+ D
Sbjct: 99 KIPTVYQQESGIDFIIGNNFCQLYEPFIQFTD 130
>BAO53365.1 reverse transcriptase [Cauliflower mosaic virus]
Length = 679
Score = 83.2 bits (204), Expect = 2e-16
Identities = 39/92 (42%), Positives = 57/92 (61%), Gaps = 2/92 (2%)
Frame = -1
Query: 316 ETEAYIDTGASICIATKALF--DKWEKVRNPARVSIADGSVHSLSWIAKKTGAYNLRKLF 143
E ++DTGAS+CIA+K + + W P V IADGS ++S + K ++F
Sbjct: 39 ELHCFVDTGASLCIASKFVIPEEHWVNAERPIMVKIADGSSITISKVCKDIDLIIAGEIF 98
Query: 142 IIPIIYQQQTGVDMILGNNFLRLYAPFCQYLD 47
IP +YQQ++G+D I+GNNF +LY PF Q+ D
Sbjct: 99 KIPTVYQQESGIDFIIGNNFCQLYEPFIQFTD 130
>P03555.1 RecName: Full=Enzymatic polyprotein; Includes: RecName:
Full=Aspartic protease; Includes: RecName:
Full=Endonuclease; Includes: RecName: Full=Reverse
transcriptase
Length = 679
Score = 83.2 bits (204), Expect = 2e-16
Identities = 39/92 (42%), Positives = 57/92 (61%), Gaps = 2/92 (2%)
Frame = -1
Query: 316 ETEAYIDTGASICIATKALF--DKWEKVRNPARVSIADGSVHSLSWIAKKTGAYNLRKLF 143
E ++DTGAS+CIA+K + + W P V IADGS ++S + K ++F
Sbjct: 39 ELHCFVDTGASLCIASKFVIPEEHWVNAERPIMVKIADGSSITISKVCKDIDLIIAGEIF 98
Query: 142 IIPIIYQQQTGVDMILGNNFLRLYAPFCQYLD 47
IP +YQQ++G+D I+GNNF +LY PF Q+ D
Sbjct: 99 KIPTVYQQESGIDFIIGNNFCQLYEPFIQFTD 130
>NP_056728.1 reverse transcriptase [Cauliflower mosaic virus] P03554.1 RecName:
Full=Enzymatic polyprotein; Includes: RecName:
Full=Aspartic protease; Includes: RecName:
Full=Endonuclease; Includes: RecName: Full=Reverse
transcriptase CAA23460.1 unnamed protein product
[Cauliflower mosaic virus]
Length = 679
Score = 83.2 bits (204), Expect = 2e-16
Identities = 39/92 (42%), Positives = 57/92 (61%), Gaps = 2/92 (2%)
Frame = -1
Query: 316 ETEAYIDTGASICIATKALF--DKWEKVRNPARVSIADGSVHSLSWIAKKTGAYNLRKLF 143
E ++DTGAS+CIA+K + + W P V IADGS ++S + K ++F
Sbjct: 39 ELHCFVDTGASLCIASKFVIPEEHWVNAERPIMVKIADGSSITISKVCKDIDLIIAGEIF 98
Query: 142 IIPIIYQQQTGVDMILGNNFLRLYAPFCQYLD 47
IP +YQQ++G+D I+GNNF +LY PF Q+ D
Sbjct: 99 RIPTVYQQESGIDFIIGNNFCQLYEPFIQFTD 130
>AFI61742.1 reverse transcriptase [Cauliflower mosaic virus]
Length = 679
Score = 83.2 bits (204), Expect = 2e-16
Identities = 39/92 (42%), Positives = 57/92 (61%), Gaps = 2/92 (2%)
Frame = -1
Query: 316 ETEAYIDTGASICIATKALF--DKWEKVRNPARVSIADGSVHSLSWIAKKTGAYNLRKLF 143
E ++DTGAS+CIA+K + + W P V IADGS ++S + K ++F
Sbjct: 39 ELHCFVDTGASLCIASKFVIPEEHWVNAERPIMVKIADGSSITISKVCKDIDLIIAGEIF 98
Query: 142 IIPIIYQQQTGVDMILGNNFLRLYAPFCQYLD 47
IP +YQQ++G+D I+GNNF +LY PF Q+ D
Sbjct: 99 KIPTVYQQESGIDFIIGNNFCQLYEPFIQFTD 130
>AAA21736.1 reverse transcriptase [Cauliflower mosaic virus]
Length = 680
Score = 83.2 bits (204), Expect = 2e-16
Identities = 39/92 (42%), Positives = 57/92 (61%), Gaps = 2/92 (2%)
Frame = -1
Query: 316 ETEAYIDTGASICIATKALF--DKWEKVRNPARVSIADGSVHSLSWIAKKTGAYNLRKLF 143
E ++DTGAS+CIA+K + + W P V IADGS ++S + K ++F
Sbjct: 40 ELHCFVDTGASLCIASKFVIPEEHWVNAERPIMVKIADGSSITISKVCKDIDLIIAGEIF 99
Query: 142 IIPIIYQQQTGVDMILGNNFLRLYAPFCQYLD 47
IP +YQQ++G+D I+GNNF +LY PF Q+ D
Sbjct: 100 KIPTVYQQESGIDFIIGNNFCQLYEPFIQFTD 131