BLASTX nr result
ID: Glycyrrhiza35_contig00025851
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza35_contig00025851
(259 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ACT64194.1 RpoB, partial [Burkholderia cepacia] ACT64195.1 RpoB,... 175 8e-54
AGW22650.1 RpoB, partial [Ralstonia solanacearum] AGW22652.1 Rpo... 177 1e-53
AGW22674.1 RpoB, partial [Ralstonia pickettii] AGW22675.1 RpoB, ... 177 1e-53
AGW22668.1 RpoB, partial [Ralstonia solanacearum] 177 1e-53
AGW22660.1 RpoB, partial [Ralstonia solanacearum] 177 1e-53
AGW22656.1 RpoB, partial [Ralstonia solanacearum] 177 1e-53
AGW22647.1 RpoB, partial [Ralstonia solanacearum] 177 1e-53
AGW22657.1 RpoB, partial [Ralstonia solanacearum] 177 1e-53
AGW22676.1 RpoB, partial [Ralstonia mannitolilytica] 177 2e-53
AGW22659.1 RpoB, partial [Ralstonia solanacearum] AGW22661.1 Rpo... 177 2e-53
AGW22648.1 RpoB, partial [Ralstonia solanacearum] AGW22649.1 Rpo... 177 2e-53
AGW22658.1 RpoB, partial [Ralstonia solanacearum] 177 2e-53
AGW22643.1 RpoB, partial [Ralstonia solanacearum] AGW22644.1 Rpo... 177 2e-53
AGW22670.1 RpoB, partial [Ralstonia solanacearum] 176 5e-53
AGW22679.1 RpoB, partial [Burkholderia glumae] 175 1e-52
AGW22678.1 RpoB, partial [Burkholderia plantarii] 175 1e-52
CUX76641.1 DNA polymerase III beta subuniz, partial [Polynucleob... 173 1e-52
CDH92739.1 DNA-directed RNA polymerase subunit beta, partial [Ac... 174 2e-52
CDH92772.1 DNA-directed RNA polymerase subunit beta, partial [Ac... 174 3e-52
CDH92773.1 DNA-directed RNA polymerase subunit beta, partial [Ac... 174 4e-52
>ACT64194.1 RpoB, partial [Burkholderia cepacia] ACT64195.1 RpoB, partial
[Burkholderia cepacia]
Length = 231
Score = 175 bits (444), Expect = 8e-54
Identities = 82/86 (95%), Positives = 86/86 (100%)
Frame = +1
Query: 1 LGQAETENLMPHDLINSKPISSAIREFFGSSQLSQFMDQTNPLSEVTHKRRISALGPGGL 180
LGQAE+ENLMPHDLINSKPISSAIREFFGSSQLSQFMDQTNPLSE+THKRR+SALGPGGL
Sbjct: 28 LGQAESENLMPHDLINSKPISSAIREFFGSSQLSQFMDQTNPLSEITHKRRVSALGPGGL 87
Query: 181 TRERAGFEVRDVHPTHYGRICPIETP 258
TRERAGFEVRDVHPTHYGR+CPIETP
Sbjct: 88 TRERAGFEVRDVHPTHYGRVCPIETP 113
>AGW22650.1 RpoB, partial [Ralstonia solanacearum] AGW22652.1 RpoB, partial
[Ralstonia solanacearum] AGW22655.1 RpoB, partial
[Ralstonia solanacearum]
Length = 322
Score = 177 bits (450), Expect = 1e-53
Identities = 85/86 (98%), Positives = 86/86 (100%)
Frame = +1
Query: 1 LGQAETENLMPHDLINSKPISSAIREFFGSSQLSQFMDQTNPLSEVTHKRRISALGPGGL 180
LGQAETENLMPHDLINSKPISSAIREFFGSSQLSQFMDQTNPLSEVTHKRRISALGPGGL
Sbjct: 7 LGQAETENLMPHDLINSKPISSAIREFFGSSQLSQFMDQTNPLSEVTHKRRISALGPGGL 66
Query: 181 TRERAGFEVRDVHPTHYGRICPIETP 258
TRERAGFEVRDVHPTHYGR+CPIETP
Sbjct: 67 TRERAGFEVRDVHPTHYGRVCPIETP 92
>AGW22674.1 RpoB, partial [Ralstonia pickettii] AGW22675.1 RpoB, partial
[Ralstonia pickettii]
Length = 324
Score = 177 bits (450), Expect = 1e-53
Identities = 85/86 (98%), Positives = 86/86 (100%)
Frame = +1
Query: 1 LGQAETENLMPHDLINSKPISSAIREFFGSSQLSQFMDQTNPLSEVTHKRRISALGPGGL 180
LGQAETENLMPHDLINSKPISSAIREFFGSSQLSQFMDQTNPLSEVTHKRRISALGPGGL
Sbjct: 1 LGQAETENLMPHDLINSKPISSAIREFFGSSQLSQFMDQTNPLSEVTHKRRISALGPGGL 60
Query: 181 TRERAGFEVRDVHPTHYGRICPIETP 258
TRERAGFEVRDVHPTHYGR+CPIETP
Sbjct: 61 TRERAGFEVRDVHPTHYGRVCPIETP 86
>AGW22668.1 RpoB, partial [Ralstonia solanacearum]
Length = 324
Score = 177 bits (450), Expect = 1e-53
Identities = 85/86 (98%), Positives = 86/86 (100%)
Frame = +1
Query: 1 LGQAETENLMPHDLINSKPISSAIREFFGSSQLSQFMDQTNPLSEVTHKRRISALGPGGL 180
LGQAETENLMPHDLINSKPISSAIREFFGSSQLSQFMDQTNPLSEVTHKRRISALGPGGL
Sbjct: 2 LGQAETENLMPHDLINSKPISSAIREFFGSSQLSQFMDQTNPLSEVTHKRRISALGPGGL 61
Query: 181 TRERAGFEVRDVHPTHYGRICPIETP 258
TRERAGFEVRDVHPTHYGR+CPIETP
Sbjct: 62 TRERAGFEVRDVHPTHYGRVCPIETP 87
>AGW22660.1 RpoB, partial [Ralstonia solanacearum]
Length = 324
Score = 177 bits (450), Expect = 1e-53
Identities = 85/86 (98%), Positives = 86/86 (100%)
Frame = +1
Query: 1 LGQAETENLMPHDLINSKPISSAIREFFGSSQLSQFMDQTNPLSEVTHKRRISALGPGGL 180
LGQAETENLMPHDLINSKPISSAIREFFGSSQLSQFMDQTNPLSEVTHKRRISALGPGGL
Sbjct: 2 LGQAETENLMPHDLINSKPISSAIREFFGSSQLSQFMDQTNPLSEVTHKRRISALGPGGL 61
Query: 181 TRERAGFEVRDVHPTHYGRICPIETP 258
TRERAGFEVRDVHPTHYGR+CPIETP
Sbjct: 62 TRERAGFEVRDVHPTHYGRVCPIETP 87
>AGW22656.1 RpoB, partial [Ralstonia solanacearum]
Length = 324
Score = 177 bits (450), Expect = 1e-53
Identities = 85/86 (98%), Positives = 86/86 (100%)
Frame = +1
Query: 1 LGQAETENLMPHDLINSKPISSAIREFFGSSQLSQFMDQTNPLSEVTHKRRISALGPGGL 180
LGQAETENLMPHDLINSKPISSAIREFFGSSQLSQFMDQTNPLSEVTHKRRISALGPGGL
Sbjct: 1 LGQAETENLMPHDLINSKPISSAIREFFGSSQLSQFMDQTNPLSEVTHKRRISALGPGGL 60
Query: 181 TRERAGFEVRDVHPTHYGRICPIETP 258
TRERAGFEVRDVHPTHYGR+CPIETP
Sbjct: 61 TRERAGFEVRDVHPTHYGRVCPIETP 86
>AGW22647.1 RpoB, partial [Ralstonia solanacearum]
Length = 324
Score = 177 bits (450), Expect = 1e-53
Identities = 85/86 (98%), Positives = 86/86 (100%)
Frame = +1
Query: 1 LGQAETENLMPHDLINSKPISSAIREFFGSSQLSQFMDQTNPLSEVTHKRRISALGPGGL 180
LGQAETENLMPHDLINSKPISSAIREFFGSSQLSQFMDQTNPLSEVTHKRRISALGPGGL
Sbjct: 1 LGQAETENLMPHDLINSKPISSAIREFFGSSQLSQFMDQTNPLSEVTHKRRISALGPGGL 60
Query: 181 TRERAGFEVRDVHPTHYGRICPIETP 258
TRERAGFEVRDVHPTHYGR+CPIETP
Sbjct: 61 TRERAGFEVRDVHPTHYGRVCPIETP 86
>AGW22657.1 RpoB, partial [Ralstonia solanacearum]
Length = 325
Score = 177 bits (450), Expect = 1e-53
Identities = 85/86 (98%), Positives = 86/86 (100%)
Frame = +1
Query: 1 LGQAETENLMPHDLINSKPISSAIREFFGSSQLSQFMDQTNPLSEVTHKRRISALGPGGL 180
LGQAETENLMPHDLINSKPISSAIREFFGSSQLSQFMDQTNPLSEVTHKRRISALGPGGL
Sbjct: 2 LGQAETENLMPHDLINSKPISSAIREFFGSSQLSQFMDQTNPLSEVTHKRRISALGPGGL 61
Query: 181 TRERAGFEVRDVHPTHYGRICPIETP 258
TRERAGFEVRDVHPTHYGR+CPIETP
Sbjct: 62 TRERAGFEVRDVHPTHYGRVCPIETP 87
>AGW22676.1 RpoB, partial [Ralstonia mannitolilytica]
Length = 326
Score = 177 bits (450), Expect = 2e-53
Identities = 85/86 (98%), Positives = 86/86 (100%)
Frame = +1
Query: 1 LGQAETENLMPHDLINSKPISSAIREFFGSSQLSQFMDQTNPLSEVTHKRRISALGPGGL 180
LGQAETENLMPHDLINSKPISSAIREFFGSSQLSQFMDQTNPLSEVTHKRRISALGPGGL
Sbjct: 3 LGQAETENLMPHDLINSKPISSAIREFFGSSQLSQFMDQTNPLSEVTHKRRISALGPGGL 62
Query: 181 TRERAGFEVRDVHPTHYGRICPIETP 258
TRERAGFEVRDVHPTHYGR+CPIETP
Sbjct: 63 TRERAGFEVRDVHPTHYGRVCPIETP 88
>AGW22659.1 RpoB, partial [Ralstonia solanacearum] AGW22661.1 RpoB, partial
[Ralstonia solanacearum]
Length = 329
Score = 177 bits (450), Expect = 2e-53
Identities = 85/86 (98%), Positives = 86/86 (100%)
Frame = +1
Query: 1 LGQAETENLMPHDLINSKPISSAIREFFGSSQLSQFMDQTNPLSEVTHKRRISALGPGGL 180
LGQAETENLMPHDLINSKPISSAIREFFGSSQLSQFMDQTNPLSEVTHKRRISALGPGGL
Sbjct: 7 LGQAETENLMPHDLINSKPISSAIREFFGSSQLSQFMDQTNPLSEVTHKRRISALGPGGL 66
Query: 181 TRERAGFEVRDVHPTHYGRICPIETP 258
TRERAGFEVRDVHPTHYGR+CPIETP
Sbjct: 67 TRERAGFEVRDVHPTHYGRVCPIETP 92
>AGW22648.1 RpoB, partial [Ralstonia solanacearum] AGW22649.1 RpoB, partial
[Ralstonia solanacearum] AGW22651.1 RpoB, partial
[Ralstonia solanacearum] AGW22669.1 RpoB, partial
[Ralstonia solanacearum]
Length = 329
Score = 177 bits (450), Expect = 2e-53
Identities = 85/86 (98%), Positives = 86/86 (100%)
Frame = +1
Query: 1 LGQAETENLMPHDLINSKPISSAIREFFGSSQLSQFMDQTNPLSEVTHKRRISALGPGGL 180
LGQAETENLMPHDLINSKPISSAIREFFGSSQLSQFMDQTNPLSEVTHKRRISALGPGGL
Sbjct: 7 LGQAETENLMPHDLINSKPISSAIREFFGSSQLSQFMDQTNPLSEVTHKRRISALGPGGL 66
Query: 181 TRERAGFEVRDVHPTHYGRICPIETP 258
TRERAGFEVRDVHPTHYGR+CPIETP
Sbjct: 67 TRERAGFEVRDVHPTHYGRVCPIETP 92
>AGW22658.1 RpoB, partial [Ralstonia solanacearum]
Length = 330
Score = 177 bits (450), Expect = 2e-53
Identities = 85/86 (98%), Positives = 86/86 (100%)
Frame = +1
Query: 1 LGQAETENLMPHDLINSKPISSAIREFFGSSQLSQFMDQTNPLSEVTHKRRISALGPGGL 180
LGQAETENLMPHDLINSKPISSAIREFFGSSQLSQFMDQTNPLSEVTHKRRISALGPGGL
Sbjct: 7 LGQAETENLMPHDLINSKPISSAIREFFGSSQLSQFMDQTNPLSEVTHKRRISALGPGGL 66
Query: 181 TRERAGFEVRDVHPTHYGRICPIETP 258
TRERAGFEVRDVHPTHYGR+CPIETP
Sbjct: 67 TRERAGFEVRDVHPTHYGRVCPIETP 92
>AGW22643.1 RpoB, partial [Ralstonia solanacearum] AGW22644.1 RpoB, partial
[Ralstonia solanacearum] AGW22645.1 RpoB, partial
[Ralstonia solanacearum] AGW22671.1 RpoB, partial
[Ralstonia solanacearum]
Length = 330
Score = 177 bits (450), Expect = 2e-53
Identities = 85/86 (98%), Positives = 86/86 (100%)
Frame = +1
Query: 1 LGQAETENLMPHDLINSKPISSAIREFFGSSQLSQFMDQTNPLSEVTHKRRISALGPGGL 180
LGQAETENLMPHDLINSKPISSAIREFFGSSQLSQFMDQTNPLSEVTHKRRISALGPGGL
Sbjct: 7 LGQAETENLMPHDLINSKPISSAIREFFGSSQLSQFMDQTNPLSEVTHKRRISALGPGGL 66
Query: 181 TRERAGFEVRDVHPTHYGRICPIETP 258
TRERAGFEVRDVHPTHYGR+CPIETP
Sbjct: 67 TRERAGFEVRDVHPTHYGRVCPIETP 92
>AGW22670.1 RpoB, partial [Ralstonia solanacearum]
Length = 322
Score = 176 bits (446), Expect = 5e-53
Identities = 84/85 (98%), Positives = 85/85 (100%)
Frame = +1
Query: 4 GQAETENLMPHDLINSKPISSAIREFFGSSQLSQFMDQTNPLSEVTHKRRISALGPGGLT 183
GQAETENLMPHDLINSKPISSAIREFFGSSQLSQFMDQTNPLSEVTHKRRISALGPGGLT
Sbjct: 1 GQAETENLMPHDLINSKPISSAIREFFGSSQLSQFMDQTNPLSEVTHKRRISALGPGGLT 60
Query: 184 RERAGFEVRDVHPTHYGRICPIETP 258
RERAGFEVRDVHPTHYGR+CPIETP
Sbjct: 61 RERAGFEVRDVHPTHYGRVCPIETP 85
>AGW22679.1 RpoB, partial [Burkholderia glumae]
Length = 323
Score = 175 bits (444), Expect = 1e-52
Identities = 82/86 (95%), Positives = 86/86 (100%)
Frame = +1
Query: 1 LGQAETENLMPHDLINSKPISSAIREFFGSSQLSQFMDQTNPLSEVTHKRRISALGPGGL 180
LGQAE+ENLMPHDLINSKPISSAIREFFGSSQLSQFMDQTNPLSE+THKRR+SALGPGGL
Sbjct: 2 LGQAESENLMPHDLINSKPISSAIREFFGSSQLSQFMDQTNPLSEITHKRRVSALGPGGL 61
Query: 181 TRERAGFEVRDVHPTHYGRICPIETP 258
TRERAGFEVRDVHPTHYGR+CPIETP
Sbjct: 62 TRERAGFEVRDVHPTHYGRVCPIETP 87
>AGW22678.1 RpoB, partial [Burkholderia plantarii]
Length = 323
Score = 175 bits (444), Expect = 1e-52
Identities = 82/86 (95%), Positives = 86/86 (100%)
Frame = +1
Query: 1 LGQAETENLMPHDLINSKPISSAIREFFGSSQLSQFMDQTNPLSEVTHKRRISALGPGGL 180
LGQAE+ENLMPHDLINSKPISSAIREFFGSSQLSQFMDQTNPLSE+THKRR+SALGPGGL
Sbjct: 2 LGQAESENLMPHDLINSKPISSAIREFFGSSQLSQFMDQTNPLSEITHKRRVSALGPGGL 61
Query: 181 TRERAGFEVRDVHPTHYGRICPIETP 258
TRERAGFEVRDVHPTHYGR+CPIETP
Sbjct: 62 TRERAGFEVRDVHPTHYGRVCPIETP 87
>CUX76641.1 DNA polymerase III beta subuniz, partial [Polynucleobacter
necessarius]
Length = 251
Score = 173 bits (438), Expect = 1e-52
Identities = 82/86 (95%), Positives = 84/86 (97%)
Frame = +1
Query: 1 LGQAETENLMPHDLINSKPISSAIREFFGSSQLSQFMDQTNPLSEVTHKRRISALGPGGL 180
LGQAETENLMPHDL NSKPISSAIREFFGSSQLSQFMDQTNPLSE+THKRRISALGPGGL
Sbjct: 113 LGQAETENLMPHDLTNSKPISSAIREFFGSSQLSQFMDQTNPLSEITHKRRISALGPGGL 172
Query: 181 TRERAGFEVRDVHPTHYGRICPIETP 258
RERAGFEVRDVHPTHYGR+CPIETP
Sbjct: 173 MRERAGFEVRDVHPTHYGRVCPIETP 198
>CDH92739.1 DNA-directed RNA polymerase subunit beta, partial [Achromobacter
insolitus]
Length = 327
Score = 174 bits (442), Expect = 2e-52
Identities = 81/86 (94%), Positives = 86/86 (100%)
Frame = +1
Query: 1 LGQAETENLMPHDLINSKPISSAIREFFGSSQLSQFMDQTNPLSEVTHKRRISALGPGGL 180
LGQAETENLMPHDLINSKPIS+AI+EFFGSSQLSQFMDQTNPLSE+THKRR+SALGPGGL
Sbjct: 11 LGQAETENLMPHDLINSKPISAAIKEFFGSSQLSQFMDQTNPLSEITHKRRVSALGPGGL 70
Query: 181 TRERAGFEVRDVHPTHYGRICPIETP 258
TRERAGFEVRDVHPTHYGR+CPIETP
Sbjct: 71 TRERAGFEVRDVHPTHYGRVCPIETP 96
>CDH92772.1 DNA-directed RNA polymerase subunit beta, partial [Achromobacter
pulmonis]
Length = 337
Score = 174 bits (442), Expect = 3e-52
Identities = 81/86 (94%), Positives = 86/86 (100%)
Frame = +1
Query: 1 LGQAETENLMPHDLINSKPISSAIREFFGSSQLSQFMDQTNPLSEVTHKRRISALGPGGL 180
LGQAETENLMPHDLINSKPIS+AI+EFFGSSQLSQFMDQTNPLSE+THKRR+SALGPGGL
Sbjct: 3 LGQAETENLMPHDLINSKPISAAIKEFFGSSQLSQFMDQTNPLSEITHKRRVSALGPGGL 62
Query: 181 TRERAGFEVRDVHPTHYGRICPIETP 258
TRERAGFEVRDVHPTHYGR+CPIETP
Sbjct: 63 TRERAGFEVRDVHPTHYGRVCPIETP 88
>CDH92773.1 DNA-directed RNA polymerase subunit beta, partial [Achromobacter
sp. CCUG 52730]
Length = 342
Score = 174 bits (442), Expect = 4e-52
Identities = 81/86 (94%), Positives = 86/86 (100%)
Frame = +1
Query: 1 LGQAETENLMPHDLINSKPISSAIREFFGSSQLSQFMDQTNPLSEVTHKRRISALGPGGL 180
LGQAETENLMPHDLINSKPIS+AI+EFFGSSQLSQFMDQTNPLSE+THKRR+SALGPGGL
Sbjct: 8 LGQAETENLMPHDLINSKPISAAIKEFFGSSQLSQFMDQTNPLSEITHKRRVSALGPGGL 67
Query: 181 TRERAGFEVRDVHPTHYGRICPIETP 258
TRERAGFEVRDVHPTHYGR+CPIETP
Sbjct: 68 TRERAGFEVRDVHPTHYGRVCPIETP 93