BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza35_contig00024688
         (282 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GAU24540.1 hypothetical protein TSUD_156530 [Trifolium subterran...    67   1e-13
GAU48983.1 hypothetical protein TSUD_245740 [Trifolium subterran...    66   2e-13
GAU33809.1 hypothetical protein TSUD_221470, partial [Trifolium ...    57   9e-11
KYP72644.1 Putative ribonuclease H protein At1g65750 family [Caj...    65   1e-10
KYP40885.1 Retrovirus-related Pol polyprotein LINE-1 [Cajanus ca...    65   3e-10
KYP63983.1 Transposon TX1 uncharacterized, partial [Cajanus cajan]     65   3e-10
KYP76161.1 Putative ribonuclease H protein At1g65750 [Cajanus ca...    64   5e-10
KYP61064.1 Putative ribonuclease H protein At1g65750 family, par...    56   6e-10
KYP49326.1 LINE-1 reverse transcriptase isogeny [Cajanus cajan]        64   6e-10
KYP64839.1 hypothetical protein KK1_019450 [Cajanus cajan]             60   1e-09
KYP48705.1 Transposon TX1 uncharacterized [Cajanus cajan]              63   1e-09
KYP62855.1 hypothetical protein KK1_017413 [Cajanus cajan]             60   4e-09
KYP64315.1 Putative ribonuclease H protein At1g65750 family, par...    59   1e-08
GAU51472.1 hypothetical protein TSUD_95870 [Trifolium subterraneum]    49   2e-08
KYP38492.1 LINE-1 reverse transcriptase isogeny, partial [Cajanu...    59   4e-08
KYP69292.1 Putative ribonuclease H protein At1g65750 family, par...    52   6e-08
KYP74006.1 Putative ribonuclease H protein At1g65750 family, par...    50   7e-08
KHN21319.1 Putative ribonuclease H protein, partial [Glycine soja]     50   8e-08
ABD28627.2 RNA-directed DNA polymerase (Reverse transcriptase); ...    47   1e-07
KYP60484.1 Putative ribonuclease H protein At1g65750 family [Caj...    48   1e-07

>GAU24540.1 hypothetical protein TSUD_156530 [Trifolium subterraneum]
          Length = 1147

 Score = 66.6 bits (161), Expect(2) = 1e-13
 Identities = 32/66 (48%), Positives = 46/66 (69%)
 Frame = +2

Query: 8   VLAEFCAGSGLKVCLLKSRAFTSGGVKKQRNETLSQITPINFTNKQEKYLGFKMHQGRIT 187
           VL  FC  SGLK+ L KS+  TS GV ++R E ++ +T I+ T+K EKYLGFKM  G++ 
Sbjct: 498 VLERFCVMSGLKISLEKSKFCTSAGVSRRRREDIAVVTQIHATDKFEKYLGFKMFYGKVR 557

Query: 188 K*DYAH 205
           K D+++
Sbjct: 558 KQDFSN 563



 Score = 37.0 bits (84), Expect(2) = 1e-13
 Identities = 15/32 (46%), Positives = 22/32 (68%), Gaps = 3/32 (9%)
 Frame = +1

Query: 196 LCALP---MQLDWFPTNICNQLDRIIRGFIWQ 282
           L +LP   MQ++W P  +C+ LDR +R FIW+
Sbjct: 593 LSSLPSYHMQINWLPQGMCDDLDRTVRRFIWK 624


>GAU48983.1 hypothetical protein TSUD_245740 [Trifolium subterraneum]
          Length = 1103

 Score = 65.9 bits (159), Expect(2) = 2e-13
 Identities = 32/66 (48%), Positives = 46/66 (69%)
 Frame = +2

Query: 8   VLAEFCAGSGLKVCLLKSRAFTSGGVKKQRNETLSQITPINFTNKQEKYLGFKMHQGRIT 187
           VL  FCA SGLK+ L KS+  TS GV ++R E ++ +T I+  +K EKYLGFKM  G++ 
Sbjct: 557 VLERFCAMSGLKISLEKSKFCTSAGVSRRRREDIAVVTQIHAIDKFEKYLGFKMFYGKVR 616

Query: 188 K*DYAH 205
           K D+++
Sbjct: 617 KQDFSN 622



 Score = 37.0 bits (84), Expect(2) = 2e-13
 Identities = 15/32 (46%), Positives = 22/32 (68%), Gaps = 3/32 (9%)
 Frame = +1

Query: 196 LCALP---MQLDWFPTNICNQLDRIIRGFIWQ 282
           L +LP   MQ++W P  +C+ LDR +R FIW+
Sbjct: 652 LSSLPSYHMQINWLPQGMCDDLDRTVRRFIWK 683


>GAU33809.1 hypothetical protein TSUD_221470, partial [Trifolium subterraneum]
          Length = 1164

 Score = 57.4 bits (137), Expect(2) = 9e-11
 Identities = 28/64 (43%), Positives = 41/64 (64%)
 Frame = +2

Query: 8    VLAEFCAGSGLKVCLLKSRAFTSGGVKKQRNETLSQITPINFTNKQEKYLGFKMHQGRIT 187
            V+  FC+ SGL +   KS+  TS GV + + E+++  + I  T+K EKYLGFKM  GR+ 
Sbjct: 835  VIKNFCSMSGLMISHSKSKFCTSSGVVRSKRESIANCSNIQATDKFEKYLGFKMFYGRVR 894

Query: 188  K*DY 199
            K D+
Sbjct: 895  KQDF 898



 Score = 36.2 bits (82), Expect(2) = 9e-11
 Identities = 11/24 (45%), Positives = 18/24 (75%)
 Frame = +1

Query: 211  MQLDWFPTNICNQLDRIIRGFIWQ 282
            MQ++W P ++C  LD+ +R FIW+
Sbjct: 938  MQINWMPQSVCEDLDKTVRRFIWK 961


>KYP72644.1 Putative ribonuclease H protein At1g65750 family [Cajanus cajan]
          Length = 272

 Score = 65.5 bits (158), Expect = 1e-10
 Identities = 33/65 (50%), Positives = 44/65 (67%)
 Frame = +2

Query: 8   VLAEFCAGSGLKVCLLKSRAFTSGGVKKQRNETLSQITPINFTNKQEKYLGFKMHQGRIT 187
           VL +FC  SGLKV + KS+A  S GV  +R   ++ IT INFTN+  KYLGF+M QGR++
Sbjct: 87  VLEKFCTTSGLKVNIQKSKALASRGVPTRRKNKITSITHINFTNELGKYLGFQMVQGRVS 146

Query: 188 K*DYA 202
              +A
Sbjct: 147 NRTFA 151


>KYP40885.1 Retrovirus-related Pol polyprotein LINE-1 [Cajanus cajan]
          Length = 338

 Score = 64.7 bits (156), Expect = 3e-10
 Identities = 32/64 (50%), Positives = 41/64 (64%)
 Frame = +2

Query: 8   VLAEFCAGSGLKVCLLKSRAFTSGGVKKQRNETLSQITPINFTNKQEKYLGFKMHQGRIT 187
           VL  FC  SGLK+ + KSRA  S GV  QR E ++ +T I  T++ E YLGF M QGRI 
Sbjct: 213 VLESFCHMSGLKISIQKSRALASKGVTSQRKEAITTVTQIRITSRIENYLGFPMFQGRIH 272

Query: 188 K*DY 199
           + D+
Sbjct: 273 RRDF 276


>KYP63983.1 Transposon TX1 uncharacterized, partial [Cajanus cajan]
          Length = 443

 Score = 64.7 bits (156), Expect(2) = 3e-10
 Identities = 32/64 (50%), Positives = 41/64 (64%)
 Frame = +2

Query: 8   VLAEFCAGSGLKVCLLKSRAFTSGGVKKQRNETLSQITPINFTNKQEKYLGFKMHQGRIT 187
           VL  FC  SGLK+ + KSRA  S GV  QR E ++ +T I  T++ E YLGF M QGRI 
Sbjct: 296 VLESFCHMSGLKISIQKSRALASKGVTSQRKEAITTVTQIRITSRIENYLGFPMFQGRIH 355

Query: 188 K*DY 199
           + D+
Sbjct: 356 RRDF 359



 Score = 26.9 bits (58), Expect(2) = 3e-10
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = +1

Query: 196 LCALPMQLDWFPTNICNQLDRIIRGFIW 279
           L ALP      P  ICN +D+ +R FIW
Sbjct: 391 LTALPS-----PQYICNFIDKSVRSFIW 413


>KYP76161.1 Putative ribonuclease H protein At1g65750 [Cajanus cajan]
          Length = 514

 Score = 64.3 bits (155), Expect = 5e-10
 Identities = 33/59 (55%), Positives = 38/59 (64%)
 Frame = +2

Query: 11  LAEFCAGSGLKVCLLKSRAFTSGGVKKQRNETLSQITPINFTNKQEKYLGFKMHQGRIT 187
           L  FC  SGLKV L KSR   S GV + R  +L+QIT I FTN   KYLGF+M  GR+T
Sbjct: 6   LQRFCNASGLKVNLTKSRMMASKGVPRSRKNSLTQITNITFTNDLGKYLGFQMMHGRVT 64


>KYP61064.1 Putative ribonuclease H protein At1g65750 family, partial [Cajanus
           cajan]
          Length = 977

 Score = 56.2 bits (134), Expect(2) = 6e-10
 Identities = 29/53 (54%), Positives = 34/53 (64%)
 Frame = +2

Query: 11  LAEFCAGSGLKVCLLKSRAFTSGGVKKQRNETLSQITPINFTNKQEKYLGFKM 169
           L  FC  SGLKV L KSR   S GV + R  +L+QIT I FTN   KYLGF++
Sbjct: 350 LQRFCNASGLKVNLTKSRMMASKGVPRSRKNSLTQITNITFTNDLGKYLGFQI 402



 Score = 34.7 bits (78), Expect(2) = 6e-10
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = +1

Query: 196 LCALPMQLDWFPTNICNQLDRIIRGFIW 279
           + A  MQ  W P+  C+QLD + R FIW
Sbjct: 429 ILAYTMQTQWLPSGTCDQLDALSRRFIW 456


>KYP49326.1 LINE-1 reverse transcriptase isogeny [Cajanus cajan]
          Length = 388

 Score = 63.9 bits (154), Expect = 6e-10
 Identities = 33/59 (55%), Positives = 38/59 (64%)
 Frame = +2

Query: 11  LAEFCAGSGLKVCLLKSRAFTSGGVKKQRNETLSQITPINFTNKQEKYLGFKMHQGRIT 187
           L  FC  SGLKV L KSR   S GV + R  +L+QIT I FTN   KYLGF+M  GR+T
Sbjct: 224 LQRFCNASGLKVNLTKSRMMASKGVPRSRKNSLTQITNITFTNDLGKYLGFQMLHGRVT 282


>KYP64839.1 hypothetical protein KK1_019450 [Cajanus cajan]
          Length = 115

 Score = 60.1 bits (144), Expect = 1e-09
 Identities = 30/60 (50%), Positives = 38/60 (63%)
 Frame = +2

Query: 8   VLAEFCAGSGLKVCLLKSRAFTSGGVKKQRNETLSQITPINFTNKQEKYLGFKMHQGRIT 187
           VL +FCA  GLKV L+KS+ F S GV  +R   +S IT I FT    KYLG+ M  GR++
Sbjct: 55  VLHQFCADLGLKVSLVKSKVFASKGVTPRRRNKISNITHIQFTRNLGKYLGYDMVHGRVS 114


>KYP48705.1 Transposon TX1 uncharacterized [Cajanus cajan]
          Length = 811

 Score = 63.2 bits (152), Expect = 1e-09
 Identities = 33/59 (55%), Positives = 39/59 (66%)
 Frame = +2

Query: 11  LAEFCAGSGLKVCLLKSRAFTSGGVKKQRNETLSQITPINFTNKQEKYLGFKMHQGRIT 187
           L  FC  SGLKV L KSR   S GV + R  +L+QIT I FTN   KYLGF+M +GR+T
Sbjct: 596 LQRFCNASGLKVNLTKSRMMASKGVPRSRKNSLTQITNIIFTNDLGKYLGFQMLRGRVT 654


>KYP62855.1 hypothetical protein KK1_017413 [Cajanus cajan]
          Length = 179

 Score = 60.1 bits (144), Expect = 4e-09
 Identities = 30/60 (50%), Positives = 38/60 (63%)
 Frame = +2

Query: 8   VLAEFCAGSGLKVCLLKSRAFTSGGVKKQRNETLSQITPINFTNKQEKYLGFKMHQGRIT 187
           VL +FCA  GLKV L+KS+ F S GV  +R   +S IT I FT    KYLG+ M  GR++
Sbjct: 119 VLHQFCADLGLKVSLVKSKVFASKGVTPRRRNKISNITHIQFTRNLGKYLGYDMVHGRVS 178


>KYP64315.1 Putative ribonuclease H protein At1g65750 family, partial [Cajanus
           cajan]
          Length = 220

 Score = 59.3 bits (142), Expect = 1e-08
 Identities = 34/78 (43%), Positives = 46/78 (58%), Gaps = 3/78 (3%)
 Frame = +2

Query: 2   INVLAEFCAGSGLKVCLLKSRAFTSGGVKKQRNETLSQITPINFTNKQEKYLGFKMHQGR 181
           + VL +F A SGLKV L+KS+AF+S GV  +R   +S IT I F +   +YLG+ M  GR
Sbjct: 61  VKVLHQFYADSGLKVSLVKSKAFSSKGVTPRRRNKISNITHIQFMSNLGRYLGYDMVHGR 120

Query: 182 IT---K*DYAHYQCSWTG 226
            +   K D    Q  W+G
Sbjct: 121 FSMCDKLDLLGRQFIWSG 138


>GAU51472.1 hypothetical protein TSUD_95870 [Trifolium subterraneum]
          Length = 1682

 Score = 48.9 bits (115), Expect(2) = 2e-08
 Identities = 26/63 (41%), Positives = 36/63 (57%)
 Frame = +2

Query: 14   AEFCAGSGLKVCLLKSRAFTSGGVKKQRNETLSQITPINFTNKQEKYLGFKMHQGRITK* 193
            A F   SGLK+   KSRA  S GV   + + ++ ++ I  TN  + YLGF M  GR+ K 
Sbjct: 1293 ARFSNASGLKINCAKSRALFSKGVPHSKKDKITNLSSICGTNSLDNYLGFPMIIGRVKKV 1352

Query: 194  DYA 202
            D+A
Sbjct: 1353 DFA 1355



 Score = 36.6 bits (83), Expect(2) = 2e-08
 Identities = 12/24 (50%), Positives = 19/24 (79%)
 Frame = +1

Query: 211  MQLDWFPTNICNQLDRIIRGFIWQ 282
            MQ+ W P++IC+Q+D + R FIW+
Sbjct: 1394 MQISWLPSSICSQIDMMTRKFIWK 1417


>KYP38492.1 LINE-1 reverse transcriptase isogeny, partial [Cajanus cajan]
          Length = 272

 Score = 58.5 bits (140), Expect = 4e-08
 Identities = 32/62 (51%), Positives = 38/62 (61%)
 Frame = +2

Query: 2   INVLAEFCAGSGLKVCLLKSRAFTSGGVKKQRNETLSQITPINFTNKQEKYLGFKMHQGR 181
           I  L  F   SG+KV L KSR   S GV + R  +L+QIT I FTN   KYLGF+M  GR
Sbjct: 209 IESLQRFYNASGVKVNLTKSRMMASKGVSRSRKNSLTQITNITFTNDLGKYLGFQMLCGR 268

Query: 182 IT 187
           +T
Sbjct: 269 VT 270


>KYP69292.1 Putative ribonuclease H protein At1g65750 family, partial [Cajanus
           cajan]
          Length = 388

 Score = 52.4 bits (124), Expect(2) = 6e-08
 Identities = 27/67 (40%), Positives = 37/67 (55%)
 Frame = +2

Query: 5   NVLAEFCAGSGLKVCLLKSRAFTSGGVKKQRNETLSQITPINFTNKQEKYLGFKMHQGRI 184
           + L  FC  SGLK+ L KS+   S GV +   E LSQI+ +  T    +YLGF +  GR 
Sbjct: 60  SALNVFCEASGLKINLSKSKMMCSTGVSRSVKEHLSQISQMRITTNLGRYLGFSLPNGRP 119

Query: 185 TK*DYAH 205
            + D+ H
Sbjct: 120 QRRDFLH 126



 Score = 31.6 bits (70), Expect(2) = 6e-08
 Identities = 9/23 (39%), Positives = 17/23 (73%)
 Frame = +1

Query: 211 MQLDWFPTNICNQLDRIIRGFIW 279
           MQ++W P  +C+ L++ +R F+W
Sbjct: 164 MQVNWLPRGLCSDLEKSMRRFLW 186


>KYP74006.1 Putative ribonuclease H protein At1g65750 family, partial [Cajanus
           cajan]
          Length = 159

 Score = 50.1 bits (118), Expect(2) = 7e-08
 Identities = 30/66 (45%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
 Frame = +2

Query: 11  LAEFCAGSGLKVCLLKSRA--FTSGGVKKQRNETLSQITPINFTNKQEKYLGFKMHQGRI 184
           L  FC  SGLKV L KSR   +      + R E L++I  + FT K E+YLGF+M  GR 
Sbjct: 1   LQAFCEASGLKVSLEKSRLGPWQLRQFPRSRVEKLARIMKVQFTCKLERYLGFQMRNGRG 60

Query: 185 TK*DYA 202
            + DYA
Sbjct: 61  KREDYA 66



 Score = 33.9 bits (76), Expect(2) = 7e-08
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = +1

Query: 190 IGLCALPMQLDWFPTNICNQLDRIIRGFIWQ 282
           + L +  MQ+ W P  +C  LD++ R FIW+
Sbjct: 98  MSLLSYHMQIHWLPQYLCEYLDKVGRSFIWK 128


>KHN21319.1 Putative ribonuclease H protein, partial [Glycine soja]
          Length = 161

 Score = 50.1 bits (118), Expect(2) = 8e-08
 Identities = 27/64 (42%), Positives = 36/64 (56%)
 Frame = +2

Query: 8   VLAEFCAGSGLKVCLLKSRAFTSGGVKKQRNETLSQITPINFTNKQEKYLGFKMHQGRIT 187
           VL  FC  SGLKV L KSR   S  V + + +  S I   + T K ++YLGF +  GR+ 
Sbjct: 5   VLHNFCMASGLKVNLQKSRFLASRNVARTKVDKFSSICGFHSTMKLDRYLGFPLLSGRVK 64

Query: 188 K*DY 199
           K D+
Sbjct: 65  KCDF 68



 Score = 33.5 bits (75), Expect(2) = 8e-08
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = +1

Query: 211 MQLDWFPTNICNQLDRIIRGFIW 279
           MQ  W PT +C+++DR+   FIW
Sbjct: 108 MQNLWLPTGVCDEIDRVTHTFIW 130


>ABD28627.2 RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H
           [Medicago truncatula]
          Length = 1296

 Score = 47.0 bits (110), Expect(2) = 1e-07
 Identities = 26/65 (40%), Positives = 35/65 (53%)
 Frame = +2

Query: 5   NVLAEFCAGSGLKVCLLKSRAFTSGGVKKQRNETLSQITPINFTNKQEKYLGFKMHQGRI 184
           N+   F   SGLK+ + KSRA+ S G    +   L+ I+ I  T    KYLGF M QGR 
Sbjct: 703 NLFDRFSRASGLKINISKSRAYYSSGTPNGKINNLTAISGIQSTTTLGKYLGFPMLQGRP 762

Query: 185 TK*DY 199
            + D+
Sbjct: 763 KRSDF 767



 Score = 36.2 bits (82), Expect(2) = 1e-07
 Identities = 11/24 (45%), Positives = 18/24 (75%)
 Frame = +1

Query: 211 MQLDWFPTNICNQLDRIIRGFIWQ 282
           MQ++W P NIC+ +D+  R F+W+
Sbjct: 807 MQINWLPQNICDSIDQTARNFLWK 830


>KYP60484.1 Putative ribonuclease H protein At1g65750 family [Cajanus cajan]
          Length = 404

 Score = 48.1 bits (113), Expect(2) = 1e-07
 Identities = 28/65 (43%), Positives = 34/65 (52%)
 Frame = +2

Query: 11  LAEFCAGSGLKVCLLKSRAFTSGGVKKQRNETLSQITPINFTNKQEKYLGFKMHQGRITK 190
           L  FC  SGLK+ L KSR   S GV   R E L     I  TN    YLGF+  +GR+T 
Sbjct: 150 LQAFCMESGLKINLGKSRFLCSKGVSHGRKEDLKVSLGICHTNNLGLYLGFRTPRGRVTS 209

Query: 191 *DYAH 205
            ++ H
Sbjct: 210 TEFNH 214



 Score = 35.0 bits (79), Expect(2) = 1e-07
 Identities = 14/31 (45%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
 Frame = +1

Query: 196 LCALP---MQLDWFPTNICNQLDRIIRGFIW 279
           L A+P   MQL W P NIC+ +DR+ +  +W
Sbjct: 244 LAAIPKYTMQLFWLPQNICDTIDRLCKALLW 274