BLASTX nr result
ID: Glycyrrhiza35_contig00024672
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza35_contig00024672
(228 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AGW45386.1 RNA-dependent RNA polymerase, partial [Plantago asiat... 147 8e-40
BAG12153.1 RNA-dependent RNA polymerase [Plantago asiatica mosai... 147 1e-39
BAG12148.1 RNA-dependent RNA polymerase [Plantago asiatica mosai... 147 1e-39
BAG12143.1 RNA-dependent RNA polymerase [Plantago asiatica mosai... 147 1e-39
BAG12133.1 RNA-dependent RNA polymerase [Plantago asiatica mosai... 147 1e-39
BAG12128.1 RNA-dependent RNA polymerase [Plantago asiatica mosai... 147 1e-39
BAG12123.1 RNA-dependent RNA polymerase [Plantago asiatica mosai... 147 1e-39
ANY93292.1 RdRp [Plantago asiatica mosaic virus] 147 1e-39
AMY62723.1 RNA-dependent RNA polymerase [Plantago asiatica mosai... 147 1e-39
AMY62718.1 RNA-dependent RNA polymerase [Plantago asiatica mosai... 147 1e-39
AMY62713.1 RNA-dependent RNA polymerase [Plantago asiatica mosai... 147 1e-39
AMY62703.1 RNA-dependent RNA polymerase [Plantago asiatica mosai... 147 1e-39
AMD78101.1 RdRP [Plantago asiatica mosaic virus] 147 1e-39
CEN56830.1 RNA-dependent RNA polymerase [Plantago asiatica mosai... 147 1e-39
AMN10083.1 RNA-dependent RNA polymerase [Plantago asiatica mosai... 146 3e-39
NP_620836.1 replicase [Plantago asiatica mosaic virus] Q07518.1 ... 146 3e-39
BAG12138.1 RNA-dependent RNA polymerase [Plantago asiatica mosai... 145 8e-39
AAX19931.1 viral replicase [Nandina mosaic virus] 144 2e-38
NP_702988.1 RNA-dependent RNA polymerase [Tulip virus X] BAC1678... 130 1e-33
NP_042695.1 RNA-dependent RNA polymerase [Cassava common mosaic ... 84 2e-17
>AGW45386.1 RNA-dependent RNA polymerase, partial [Plantago asiatica mosaic
virus]
Length = 711
Score = 147 bits (372), Expect = 8e-40
Identities = 72/75 (96%), Positives = 74/75 (98%)
Frame = +3
Query: 3 AYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDAISNVIANYSLDA 182
AYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDAI+NV+ANYSLDA
Sbjct: 611 AYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDAITNVVANYSLDA 670
Query: 183 KLAYSLGDDLQGLLS 227
KLAYSLGDDLQ LLS
Sbjct: 671 KLAYSLGDDLQDLLS 685
>BAG12153.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 147 bits (372), Expect = 1e-39
Identities = 72/75 (96%), Positives = 74/75 (98%)
Frame = +3
Query: 3 AYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDAISNVIANYSLDA 182
AYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDAI+NV+ANYSLDA
Sbjct: 1280 AYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDAITNVVANYSLDA 1339
Query: 183 KLAYSLGDDLQGLLS 227
KLAYSLGDDLQ LLS
Sbjct: 1340 KLAYSLGDDLQDLLS 1354
>BAG12148.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 147 bits (372), Expect = 1e-39
Identities = 72/75 (96%), Positives = 74/75 (98%)
Frame = +3
Query: 3 AYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDAISNVIANYSLDA 182
AYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDAI+NV+ANYSLDA
Sbjct: 1280 AYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDAITNVVANYSLDA 1339
Query: 183 KLAYSLGDDLQGLLS 227
KLAYSLGDDLQ LLS
Sbjct: 1340 KLAYSLGDDLQDLLS 1354
>BAG12143.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 147 bits (372), Expect = 1e-39
Identities = 72/75 (96%), Positives = 74/75 (98%)
Frame = +3
Query: 3 AYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDAISNVIANYSLDA 182
AYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDAI+NV+ANYSLDA
Sbjct: 1280 AYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDAITNVVANYSLDA 1339
Query: 183 KLAYSLGDDLQGLLS 227
KLAYSLGDDLQ LLS
Sbjct: 1340 KLAYSLGDDLQDLLS 1354
>BAG12133.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 147 bits (372), Expect = 1e-39
Identities = 72/75 (96%), Positives = 74/75 (98%)
Frame = +3
Query: 3 AYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDAISNVIANYSLDA 182
AYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDAI+NV+ANYSLDA
Sbjct: 1280 AYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDAITNVVANYSLDA 1339
Query: 183 KLAYSLGDDLQGLLS 227
KLAYSLGDDLQ LLS
Sbjct: 1340 KLAYSLGDDLQDLLS 1354
>BAG12128.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 147 bits (372), Expect = 1e-39
Identities = 72/75 (96%), Positives = 74/75 (98%)
Frame = +3
Query: 3 AYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDAISNVIANYSLDA 182
AYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDAI+NV+ANYSLDA
Sbjct: 1280 AYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDAITNVVANYSLDA 1339
Query: 183 KLAYSLGDDLQGLLS 227
KLAYSLGDDLQ LLS
Sbjct: 1340 KLAYSLGDDLQDLLS 1354
>BAG12123.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 147 bits (372), Expect = 1e-39
Identities = 72/75 (96%), Positives = 74/75 (98%)
Frame = +3
Query: 3 AYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDAISNVIANYSLDA 182
AYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDAI+NV+ANYSLDA
Sbjct: 1280 AYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDAITNVVANYSLDA 1339
Query: 183 KLAYSLGDDLQGLLS 227
KLAYSLGDDLQ LLS
Sbjct: 1340 KLAYSLGDDLQDLLS 1354
>ANY93292.1 RdRp [Plantago asiatica mosaic virus]
Length = 1380
Score = 147 bits (372), Expect = 1e-39
Identities = 72/75 (96%), Positives = 74/75 (98%)
Frame = +3
Query: 3 AYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDAISNVIANYSLDA 182
AYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDAI+NV+ANYSLDA
Sbjct: 1280 AYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDAITNVVANYSLDA 1339
Query: 183 KLAYSLGDDLQGLLS 227
KLAYSLGDDLQ LLS
Sbjct: 1340 KLAYSLGDDLQDLLS 1354
>AMY62723.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 147 bits (372), Expect = 1e-39
Identities = 72/75 (96%), Positives = 74/75 (98%)
Frame = +3
Query: 3 AYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDAISNVIANYSLDA 182
AYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDAI+NV+ANYSLDA
Sbjct: 1280 AYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDAITNVVANYSLDA 1339
Query: 183 KLAYSLGDDLQGLLS 227
KLAYSLGDDLQ LLS
Sbjct: 1340 KLAYSLGDDLQDLLS 1354
>AMY62718.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 147 bits (372), Expect = 1e-39
Identities = 72/75 (96%), Positives = 74/75 (98%)
Frame = +3
Query: 3 AYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDAISNVIANYSLDA 182
AYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDAI+NV+ANYSLDA
Sbjct: 1280 AYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDAITNVVANYSLDA 1339
Query: 183 KLAYSLGDDLQGLLS 227
KLAYSLGDDLQ LLS
Sbjct: 1340 KLAYSLGDDLQDLLS 1354
>AMY62713.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 147 bits (372), Expect = 1e-39
Identities = 72/75 (96%), Positives = 74/75 (98%)
Frame = +3
Query: 3 AYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDAISNVIANYSLDA 182
AYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDAI+NV+ANYSLDA
Sbjct: 1280 AYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDAITNVVANYSLDA 1339
Query: 183 KLAYSLGDDLQGLLS 227
KLAYSLGDDLQ LLS
Sbjct: 1340 KLAYSLGDDLQDLLS 1354
>AMY62703.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
AMY62708.1 RNA-dependent RNA polymerase [Plantago
asiatica mosaic virus]
Length = 1380
Score = 147 bits (372), Expect = 1e-39
Identities = 72/75 (96%), Positives = 74/75 (98%)
Frame = +3
Query: 3 AYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDAISNVIANYSLDA 182
AYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDAI+NV+ANYSLDA
Sbjct: 1280 AYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDAITNVVANYSLDA 1339
Query: 183 KLAYSLGDDLQGLLS 227
KLAYSLGDDLQ LLS
Sbjct: 1340 KLAYSLGDDLQDLLS 1354
>AMD78101.1 RdRP [Plantago asiatica mosaic virus]
Length = 1380
Score = 147 bits (372), Expect = 1e-39
Identities = 72/75 (96%), Positives = 74/75 (98%)
Frame = +3
Query: 3 AYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDAISNVIANYSLDA 182
AYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDAI+NV+ANYSLDA
Sbjct: 1280 AYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDAITNVVANYSLDA 1339
Query: 183 KLAYSLGDDLQGLLS 227
KLAYSLGDDLQ LLS
Sbjct: 1340 KLAYSLGDDLQDLLS 1354
>CEN56830.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 147 bits (372), Expect = 1e-39
Identities = 72/75 (96%), Positives = 74/75 (98%)
Frame = +3
Query: 3 AYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDAISNVIANYSLDA 182
AYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDAI+NV+ANYSLDA
Sbjct: 1280 AYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDAITNVVANYSLDA 1339
Query: 183 KLAYSLGDDLQGLLS 227
KLAYSLGDDLQ LLS
Sbjct: 1340 KLAYSLGDDLQDLLS 1354
>AMN10083.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1387
Score = 146 bits (369), Expect = 3e-39
Identities = 71/75 (94%), Positives = 74/75 (98%)
Frame = +3
Query: 3 AYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDAISNVIANYSLDA 182
AYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQ+KAGVKDAI+NV+ANYSLDA
Sbjct: 1287 AYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQRKAGVKDAIANVVANYSLDA 1346
Query: 183 KLAYSLGDDLQGLLS 227
KLAYSLGDDLQ LLS
Sbjct: 1347 KLAYSLGDDLQDLLS 1361
>NP_620836.1 replicase [Plantago asiatica mosaic virus] Q07518.1 RecName: Full=RNA
replication protein; AltName: Full=156 kDa protein;
AltName: Full=ORF1 protein; Includes: RecName:
Full=RNA-directed RNA polymerase; Includes: RecName:
Full=Helicase CAA79761.1 156K-protein [Plantago asiatica
mosaic virus]
Length = 1385
Score = 146 bits (369), Expect = 3e-39
Identities = 71/75 (94%), Positives = 74/75 (98%)
Frame = +3
Query: 3 AYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDAISNVIANYSLDA 182
AYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGV+DAI+NV+ANYSLDA
Sbjct: 1285 AYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVRDAITNVVANYSLDA 1344
Query: 183 KLAYSLGDDLQGLLS 227
KLAYSLGDDLQ LLS
Sbjct: 1345 KLAYSLGDDLQDLLS 1359
>BAG12138.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 145 bits (366), Expect = 8e-39
Identities = 71/75 (94%), Positives = 73/75 (97%)
Frame = +3
Query: 3 AYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDAISNVIANYSLDA 182
AYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDAI+NV+ NYSLDA
Sbjct: 1280 AYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDAITNVVDNYSLDA 1339
Query: 183 KLAYSLGDDLQGLLS 227
KLAYSLGDDLQ LLS
Sbjct: 1340 KLAYSLGDDLQDLLS 1354
>AAX19931.1 viral replicase [Nandina mosaic virus]
Length = 1368
Score = 144 bits (363), Expect = 2e-38
Identities = 70/75 (93%), Positives = 73/75 (97%)
Frame = +3
Query: 3 AYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDAISNVIANYSLDA 182
AYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDAI+NV+ANYSLDA
Sbjct: 1268 AYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDAITNVVANYSLDA 1327
Query: 183 KLAYSLGDDLQGLLS 227
KLAYSLGD+L LLS
Sbjct: 1328 KLAYSLGDELHDLLS 1342
>NP_702988.1 RNA-dependent RNA polymerase [Tulip virus X] BAC16785.1 RNA-dependent
RNA polymerase [Tulip virus X]
Length = 1361
Score = 130 bits (328), Expect = 1e-33
Identities = 63/75 (84%), Positives = 68/75 (90%)
Frame = +3
Query: 3 AYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDAISNVIANYSLDA 182
AY PQ RG WAEFCGYLITPKGLIKDPLKLH+SLELAKA +K G KDAI+NV+ANYSLDA
Sbjct: 1261 AYAPQTRGAWAEFCGYLITPKGLIKDPLKLHSSLELAKALRKQGRKDAITNVVANYSLDA 1320
Query: 183 KLAYSLGDDLQGLLS 227
K+AYSLGDDLQ LLS
Sbjct: 1321 KMAYSLGDDLQDLLS 1335
>NP_042695.1 RNA-dependent RNA polymerase [Cassava common mosaic virus] AAC54775.1
ORF 1; putative RNA dependent RNA polymerase [Cassava
common mosaic virus] prf||2207297A ORF 1 [Cassava common
mosaic virus]
Length = 1449
Score = 84.3 bits (207), Expect = 2e-17
Identities = 43/68 (63%), Positives = 49/68 (72%)
Frame = +3
Query: 24 GQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDAISNVIANYSLDAKLAYSLG 203
G+WAEFCGYLITPKGLIKDPLKL AS LAK + K + N + NY+ D KLAY LG
Sbjct: 1361 GEWAEFCGYLITPKGLIKDPLKLAASFRLAKERGKR----ELDNCLENYARDMKLAYDLG 1416
Query: 204 DDLQGLLS 227
DDL LL+
Sbjct: 1417 DDLLELLT 1424