BLASTX nr result
ID: Glycyrrhiza35_contig00024596
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza35_contig00024596
(218 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KYP61181.1 Copia protein [Cajanus cajan] 76 2e-16
AFK38462.1 unknown [Lotus japonicus] 75 2e-16
KYP40911.1 Retrovirus-related Pol polyprotein from transposon TN... 78 1e-15
KYP36807.1 Copia protein [Cajanus cajan] 78 1e-15
KYP75334.1 Copia protein [Cajanus cajan] 76 2e-15
KYP59729.1 Retrovirus-related Pol polyprotein from transposon TN... 76 4e-15
KYP61341.1 Retrovirus-related Pol polyprotein from transposon TN... 78 4e-15
KYP46257.1 Retrovirus-related Pol polyprotein from transposon TN... 78 4e-15
KYP75232.1 Copia protein [Cajanus cajan] 76 5e-15
KYP30996.1 Copia protein [Cajanus cajan] 74 8e-15
KYP44504.1 hypothetical protein KK1_034024 [Cajanus cajan] 76 1e-14
KYP50410.1 Retrovirus-related Pol polyprotein from transposon TN... 76 1e-14
KYP49744.1 Copia protein [Cajanus cajan] 75 1e-14
KYP68422.1 Retrovirus-related Pol polyprotein from transposon TN... 74 2e-14
KYP53273.1 Copia protein [Cajanus cajan] 73 2e-14
KYP78810.1 Copia protein, partial [Cajanus cajan] 72 3e-14
KYP34307.1 Retrovirus-related Pol polyprotein from transposon TN... 75 4e-14
GAU26774.1 hypothetical protein TSUD_317720 [Trifolium subterran... 75 4e-14
GAU48593.1 hypothetical protein TSUD_179750 [Trifolium subterran... 75 4e-14
GAU49672.1 hypothetical protein TSUD_91100 [Trifolium subterraneum] 75 5e-14
>KYP61181.1 Copia protein [Cajanus cajan]
Length = 98
Score = 76.3 bits (186), Expect = 2e-16
Identities = 38/53 (71%), Positives = 42/53 (79%)
Frame = -2
Query: 196 TKHMELDIHFVREKVAAKSLQVCHIPAQAQIADTLTKPLIATRFCELRTKLNV 38
TKHMELD+ FVREKVAAK LQV H+PA Q AD LTK L +RFCELR+KL V
Sbjct: 39 TKHMELDLFFVREKVAAKRLQVVHVPAIDQCADVLTKALSPSRFCELRSKLQV 91
>AFK38462.1 unknown [Lotus japonicus]
Length = 60
Score = 74.7 bits (182), Expect = 2e-16
Identities = 34/51 (66%), Positives = 42/51 (82%)
Frame = -2
Query: 196 TKHMELDIHFVREKVAAKSLQVCHIPAQAQIADTLTKPLIATRFCELRTKL 44
TKH+ELD+HFVREKV +KSL+VCHIPA Q + LTKPL + +F +LRTKL
Sbjct: 7 TKHLELDLHFVREKVLSKSLKVCHIPADLQTTNGLTKPLTSLKFIDLRTKL 57
>KYP40911.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan] KYP44175.1 Retrovirus-related Pol
polyprotein from transposon TNT 1-94 [Cajanus cajan]
Length = 255
Score = 77.8 bits (190), Expect = 1e-15
Identities = 39/53 (73%), Positives = 42/53 (79%)
Frame = -2
Query: 196 TKHMELDIHFVREKVAAKSLQVCHIPAQAQIADTLTKPLIATRFCELRTKLNV 38
TKHMELD+ FVREKVAAK LQV H+PA Q AD LTK L TRFCELR+KL V
Sbjct: 196 TKHMELDLFFVREKVAAKCLQVVHVPAIDQCADVLTKALSPTRFCELRSKLQV 248
>KYP36807.1 Copia protein [Cajanus cajan]
Length = 267
Score = 77.8 bits (190), Expect = 1e-15
Identities = 38/53 (71%), Positives = 43/53 (81%)
Frame = -2
Query: 196 TKHMELDIHFVREKVAAKSLQVCHIPAQAQIADTLTKPLIATRFCELRTKLNV 38
TKHMELDIHFVREKV +K+L V H+PA AQ+AD LTKPL +T FC LR KL V
Sbjct: 209 TKHMELDIHFVREKVVSKNLIVQHVPAFAQVADILTKPLSSTFFCNLRDKLKV 261
>KYP75334.1 Copia protein [Cajanus cajan]
Length = 198
Score = 75.9 bits (185), Expect = 2e-15
Identities = 38/60 (63%), Positives = 44/60 (73%)
Frame = -2
Query: 196 TKHMELDIHFVREKVAAKSLQVCHIPAQAQIADTLTKPLIATRFCELRTKLNVTNYASAP 17
TKHMELD+ FVREKVAA SL V H+PA Q AD LTK L +RFCELRTKL + + + P
Sbjct: 138 TKHMELDLFFVREKVAANSLHVVHVPAIDQYADILTKALSPSRFCELRTKLKLVDSSPHP 197
>KYP59729.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 254
Score = 76.3 bits (186), Expect = 4e-15
Identities = 38/60 (63%), Positives = 44/60 (73%)
Frame = -2
Query: 196 TKHMELDIHFVREKVAAKSLQVCHIPAQAQIADTLTKPLIATRFCELRTKLNVTNYASAP 17
TKHMELD+ FVREKVAA SL V H+PA Q AD LTK L +RFCELRTKL + + + P
Sbjct: 194 TKHMELDLFFVREKVAANSLHVVHVPAIDQYADILTKALSPSRFCELRTKLKLVDSSPQP 253
>KYP61341.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1073
Score = 77.8 bits (190), Expect = 4e-15
Identities = 39/53 (73%), Positives = 42/53 (79%)
Frame = -2
Query: 196 TKHMELDIHFVREKVAAKSLQVCHIPAQAQIADTLTKPLIATRFCELRTKLNV 38
TKHMELD+ FVREKVAAK LQV H+PA Q AD LTK L TRFCELR+KL V
Sbjct: 1014 TKHMELDLFFVREKVAAKCLQVVHVPAIDQCADVLTKALSPTRFCELRSKLQV 1066
>KYP46257.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1408
Score = 77.8 bits (190), Expect = 4e-15
Identities = 39/53 (73%), Positives = 42/53 (79%)
Frame = -2
Query: 196 TKHMELDIHFVREKVAAKSLQVCHIPAQAQIADTLTKPLIATRFCELRTKLNV 38
TKHMELD+ FVREKVAAK LQV H+PA Q AD LTK L TRFCELR+KL V
Sbjct: 1349 TKHMELDLFFVREKVAAKCLQVVHVPAIDQCADVLTKALSPTRFCELRSKLQV 1401
>KYP75232.1 Copia protein [Cajanus cajan]
Length = 250
Score = 75.9 bits (185), Expect = 5e-15
Identities = 38/60 (63%), Positives = 44/60 (73%)
Frame = -2
Query: 196 TKHMELDIHFVREKVAAKSLQVCHIPAQAQIADTLTKPLIATRFCELRTKLNVTNYASAP 17
TKHMELD+ FVREKVAA SL V H+PA Q AD LTK L +RFCELRTKL + + + P
Sbjct: 190 TKHMELDLFFVREKVAANSLHVVHVPAIDQYADILTKALSPSRFCELRTKLKLVDSSPHP 249
>KYP30996.1 Copia protein [Cajanus cajan]
Length = 197
Score = 74.3 bits (181), Expect = 8e-15
Identities = 36/53 (67%), Positives = 42/53 (79%)
Frame = -2
Query: 196 TKHMELDIHFVREKVAAKSLQVCHIPAQAQIADTLTKPLIATRFCELRTKLNV 38
TKHMELD+ FVREKVAAK LQV H+PA Q AD LTK L +RFC+LR+K+ V
Sbjct: 138 TKHMELDLFFVREKVAAKCLQVVHVPAIDQCADVLTKALSPSRFCDLRSKIQV 190
>KYP44504.1 hypothetical protein KK1_034024 [Cajanus cajan]
Length = 367
Score = 76.3 bits (186), Expect = 1e-14
Identities = 38/53 (71%), Positives = 42/53 (79%)
Frame = -2
Query: 196 TKHMELDIHFVREKVAAKSLQVCHIPAQAQIADTLTKPLIATRFCELRTKLNV 38
TKHMELD+ FVREKVAAK LQV H+PA Q AD LTK L +RFCELR+KL V
Sbjct: 308 TKHMELDLFFVREKVAAKRLQVVHVPAIDQCADVLTKALSPSRFCELRSKLQV 360
>KYP50410.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 538
Score = 76.3 bits (186), Expect = 1e-14
Identities = 38/60 (63%), Positives = 44/60 (73%)
Frame = -2
Query: 196 TKHMELDIHFVREKVAAKSLQVCHIPAQAQIADTLTKPLIATRFCELRTKLNVTNYASAP 17
TKHMELD+ FVREKVAA SL V H+PA Q AD LTK L +RFCELRTKL + + + P
Sbjct: 478 TKHMELDLFFVREKVAANSLHVVHVPAIDQYADILTKALSPSRFCELRTKLKLVDSSPQP 537
>KYP49744.1 Copia protein [Cajanus cajan]
Length = 255
Score = 74.7 bits (182), Expect = 1e-14
Identities = 37/53 (69%), Positives = 42/53 (79%)
Frame = -2
Query: 196 TKHMELDIHFVREKVAAKSLQVCHIPAQAQIADTLTKPLIATRFCELRTKLNV 38
TKHMELD+ FVREKVAAK LQV H+PA Q AD LTK L +RFC+LR KL+V
Sbjct: 196 TKHMELDLFFVREKVAAKCLQVVHVPAIDQCADVLTKALSPSRFCDLRCKLHV 248
>KYP68422.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 255
Score = 74.3 bits (181), Expect = 2e-14
Identities = 36/53 (67%), Positives = 42/53 (79%)
Frame = -2
Query: 196 TKHMELDIHFVREKVAAKSLQVCHIPAQAQIADTLTKPLIATRFCELRTKLNV 38
TKHMELD+ FVREKVAAK LQV H+PA Q AD LTK L +RFC+LR+K+ V
Sbjct: 196 TKHMELDLFFVREKVAAKCLQVVHVPAIDQCADVLTKALSPSRFCDLRSKIQV 248
>KYP53273.1 Copia protein [Cajanus cajan]
Length = 198
Score = 73.2 bits (178), Expect = 2e-14
Identities = 36/60 (60%), Positives = 44/60 (73%)
Frame = -2
Query: 196 TKHMELDIHFVREKVAAKSLQVCHIPAQAQIADTLTKPLIATRFCELRTKLNVTNYASAP 17
TKHMELD+ FVREKVAA L+V H+PA Q AD LTK L +RFCELR+KL + + + P
Sbjct: 138 TKHMELDLFFVREKVAANLLRVVHVPAADQYADILTKSLSPSRFCELRSKLKLADSSPHP 197
>KYP78810.1 Copia protein, partial [Cajanus cajan]
Length = 145
Score = 71.6 bits (174), Expect = 3e-14
Identities = 36/53 (67%), Positives = 39/53 (73%)
Frame = -2
Query: 196 TKHMELDIHFVREKVAAKSLQVCHIPAQAQIADTLTKPLIATRFCELRTKLNV 38
TKHMELDI FVREKV KSL V ++P QAQIAD LTKPL +FC R KL V
Sbjct: 82 TKHMELDIFFVREKVLNKSLIVSYVPTQAQIADILTKPLSKVQFCNFRDKLKV 134
>KYP34307.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1102
Score = 75.1 bits (183), Expect = 4e-14
Identities = 37/53 (69%), Positives = 42/53 (79%)
Frame = -2
Query: 196 TKHMELDIHFVREKVAAKSLQVCHIPAQAQIADTLTKPLIATRFCELRTKLNV 38
TKHMELD+ FVREKVAAK LQV H+PA Q AD LTK L +RFC+LR+KL V
Sbjct: 1043 TKHMELDLFFVREKVAAKCLQVVHVPAIDQCADVLTKALSPSRFCDLRSKLQV 1095
>GAU26774.1 hypothetical protein TSUD_317720 [Trifolium subterraneum]
Length = 1262
Score = 75.1 bits (183), Expect = 4e-14
Identities = 38/53 (71%), Positives = 40/53 (75%)
Frame = -2
Query: 196 TKHMELDIHFVREKVAAKSLQVCHIPAQAQIADTLTKPLIATRFCELRTKLNV 38
TKHMELDI FVREKV KSL V H+PAQ Q AD LTKPL A +FC LR KL V
Sbjct: 1193 TKHMELDIFFVREKVLNKSLVVAHVPAQDQWADVLTKPLSAAKFCALREKLRV 1245
>GAU48593.1 hypothetical protein TSUD_179750 [Trifolium subterraneum]
Length = 1364
Score = 75.1 bits (183), Expect = 4e-14
Identities = 38/53 (71%), Positives = 40/53 (75%)
Frame = -2
Query: 196 TKHMELDIHFVREKVAAKSLQVCHIPAQAQIADTLTKPLIATRFCELRTKLNV 38
TKHMELDI FVREKV KSL V H+PAQ Q AD LTKPL A +FC LR KL V
Sbjct: 1295 TKHMELDIFFVREKVLNKSLVVAHVPAQDQWADVLTKPLSAAKFCALREKLRV 1347
>GAU49672.1 hypothetical protein TSUD_91100 [Trifolium subterraneum]
Length = 1380
Score = 74.7 bits (182), Expect = 5e-14
Identities = 38/63 (60%), Positives = 44/63 (69%)
Frame = -2
Query: 196 TKHMELDIHFVREKVAAKSLQVCHIPAQAQIADTLTKPLIATRFCELRTKLNVTNYASAP 17
TKHMELDI FVREKV +KSL V H+PA Q AD LTKPL A +FC +R+KL V + S
Sbjct: 1312 TKHMELDIFFVREKVLSKSLVVSHVPASDQWADVLTKPLSAIKFCNMRSKLRVFDKPSLV 1371
Query: 16 *VC 8
C
Sbjct: 1372 KAC 1374