BLASTX nr result
ID: Glycyrrhiza35_contig00023720
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza35_contig00023720
(238 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ERF79922.1 prephenate dehydratase, partial [Bradyrhizobium sp. D... 159 8e-48
WP_024583940.1 MULTISPECIES: polymerase [Bradyrhizobium] KIU4423... 164 1e-46
WP_076865865.1 porin [Bradyrhizobium sp. SEMIA 6399] 163 3e-46
WP_038382822.1 polymerase [Bradyrhizobium elkanii] 162 6e-46
SEC88396.1 Porin subfamily protein [Bradyrhizobium erythrophlei] 161 1e-45
WP_063695346.1 polymerase [Bradyrhizobium embrapense] 161 2e-45
WP_028341254.1 polymerase [Bradyrhizobium elkanii] 160 4e-45
WP_016844529.1 porin, partial [Bradyrhizobium elkanii] 134 6e-36
WP_066515986.1 polymerase [Bradyrhizobium sp. BR 10303] KWV43945... 135 1e-35
WP_044587760.1 polymerase [Bradyrhizobium sp. LTSPM299] KJC60302... 134 1e-35
WP_044539031.1 polymerase [Bradyrhizobium sp. LTSP885] KJC45006.... 134 1e-35
WP_018270372.1 porin [Bradyrhizobium elkanii] ODM75538.1 polymer... 134 1e-35
WP_050404647.1 polymerase [Bradyrhizobium embrapense] 134 3e-35
SEE31870.1 Porin subfamily protein [Bradyrhizobium erythrophlei] 133 4e-35
WP_066510372.1 polymerase [Bradyrhizobium sp. BR 10303] KWV51768... 131 3e-34
SDF86888.1 Porin subfamily protein [Bradyrhizobium sp. R5] 131 3e-34
WP_038386466.1 polymerase [Bradyrhizobium elkanii] 131 3e-34
WP_029078292.1 polymerase [Bradyrhizobium sp. th.b2] 131 3e-34
WP_028334471.1 polymerase [Bradyrhizobium elkanii] 131 3e-34
WP_076862717.1 porin [Bradyrhizobium sp. SEMIA 6399] 130 4e-34
>ERF79922.1 prephenate dehydratase, partial [Bradyrhizobium sp. DFCI-1]
Length = 221
Score = 159 bits (403), Expect = 8e-48
Identities = 72/79 (91%), Positives = 79/79 (100%)
Frame = +1
Query: 1 GGTGVGGSFGILLGATSNLTSCNPDYSIAQIGTQTQWTPVKNLTFSADFTYTHLDQNYAG 180
GGTGVGGSFG+L+GATSNLTSCNPDYS+AQIGTQTQWTPVKNLTFSADFTYTHLDQNYAG
Sbjct: 127 GGTGVGGSFGVLIGATSNLTSCNPDYSVAQIGTQTQWTPVKNLTFSADFTYTHLDQNYAG 186
Query: 181 TVTYPGSASIGKPAAVYAL 237
T++YPGSA+IGKPAAVY+L
Sbjct: 187 TISYPGSAAIGKPAAVYSL 205
>WP_024583940.1 MULTISPECIES: polymerase [Bradyrhizobium] KIU44230.1 polymerase
[Bradyrhizobium elkanii] OCX27968.1 polymerase
[Bradyrhizobium sp. UASWS1016]
Length = 519
Score = 164 bits (415), Expect = 1e-46
Identities = 78/79 (98%), Positives = 79/79 (100%)
Frame = +1
Query: 1 GGTGVGGSFGILLGATSNLTSCNPDYSIAQIGTQTQWTPVKNLTFSADFTYTHLDQNYAG 180
GGTGVGGSFGILLGATSNLTSCNPDYSIAQIGTQTQWTPVKNLTFSADFTYTHLDQNYAG
Sbjct: 425 GGTGVGGSFGILLGATSNLTSCNPDYSIAQIGTQTQWTPVKNLTFSADFTYTHLDQNYAG 484
Query: 181 TVTYPGSASIGKPAAVYAL 237
TVTYPGSASIGKPAAVY+L
Sbjct: 485 TVTYPGSASIGKPAAVYSL 503
>WP_076865865.1 porin [Bradyrhizobium sp. SEMIA 6399]
Length = 519
Score = 163 bits (412), Expect = 3e-46
Identities = 76/79 (96%), Positives = 79/79 (100%)
Frame = +1
Query: 1 GGTGVGGSFGILLGATSNLTSCNPDYSIAQIGTQTQWTPVKNLTFSADFTYTHLDQNYAG 180
GGTGVGGSFGIL+GATSNLTSCNPDYS+AQIGTQTQWTPVKNLTFSADFTYTHLDQNYAG
Sbjct: 425 GGTGVGGSFGILIGATSNLTSCNPDYSVAQIGTQTQWTPVKNLTFSADFTYTHLDQNYAG 484
Query: 181 TVTYPGSASIGKPAAVYAL 237
TVTYPGSA+IGKPAAVYAL
Sbjct: 485 TVTYPGSAAIGKPAAVYAL 503
>WP_038382822.1 polymerase [Bradyrhizobium elkanii]
Length = 518
Score = 162 bits (410), Expect = 6e-46
Identities = 76/79 (96%), Positives = 79/79 (100%)
Frame = +1
Query: 1 GGTGVGGSFGILLGATSNLTSCNPDYSIAQIGTQTQWTPVKNLTFSADFTYTHLDQNYAG 180
GGTGVGGSFGIL+GATSNLTSCNPDYSIAQIGTQTQWTPVKNLTFSADFTYTHLDQNYAG
Sbjct: 424 GGTGVGGSFGILIGATSNLTSCNPDYSIAQIGTQTQWTPVKNLTFSADFTYTHLDQNYAG 483
Query: 181 TVTYPGSASIGKPAAVYAL 237
TVTYPGSA+IGKPAAVY+L
Sbjct: 484 TVTYPGSAAIGKPAAVYSL 502
>SEC88396.1 Porin subfamily protein [Bradyrhizobium erythrophlei]
Length = 519
Score = 161 bits (408), Expect = 1e-45
Identities = 74/79 (93%), Positives = 79/79 (100%)
Frame = +1
Query: 1 GGTGVGGSFGILLGATSNLTSCNPDYSIAQIGTQTQWTPVKNLTFSADFTYTHLDQNYAG 180
GGTGVGGSFG+L+GATSNLTSCNPDYSIAQIGTQTQWTPVKNLTFSADFTYTHLDQNYAG
Sbjct: 425 GGTGVGGSFGVLIGATSNLTSCNPDYSIAQIGTQTQWTPVKNLTFSADFTYTHLDQNYAG 484
Query: 181 TVTYPGSASIGKPAAVYAL 237
T+TYPGSA+IGKPAAVY+L
Sbjct: 485 TITYPGSAAIGKPAAVYSL 503
>WP_063695346.1 polymerase [Bradyrhizobium embrapense]
Length = 519
Score = 161 bits (407), Expect = 2e-45
Identities = 73/79 (92%), Positives = 79/79 (100%)
Frame = +1
Query: 1 GGTGVGGSFGILLGATSNLTSCNPDYSIAQIGTQTQWTPVKNLTFSADFTYTHLDQNYAG 180
GGTGVGGSFG+L+GATSNLTSCNPDYS+AQIGTQTQWTPVKNLTFSADFTYTHLDQNYAG
Sbjct: 425 GGTGVGGSFGVLIGATSNLTSCNPDYSVAQIGTQTQWTPVKNLTFSADFTYTHLDQNYAG 484
Query: 181 TVTYPGSASIGKPAAVYAL 237
T+TYPGSA+IGKPAAVY+L
Sbjct: 485 TITYPGSAAIGKPAAVYSL 503
>WP_028341254.1 polymerase [Bradyrhizobium elkanii]
Length = 518
Score = 160 bits (404), Expect = 4e-45
Identities = 74/79 (93%), Positives = 78/79 (98%)
Frame = +1
Query: 1 GGTGVGGSFGILLGATSNLTSCNPDYSIAQIGTQTQWTPVKNLTFSADFTYTHLDQNYAG 180
GGTGVGGSFG L+GATSNLTSCNPDYSIAQIGTQTQWTPVKNLTFSADFTYTHLDQNYAG
Sbjct: 424 GGTGVGGSFGTLIGATSNLTSCNPDYSIAQIGTQTQWTPVKNLTFSADFTYTHLDQNYAG 483
Query: 181 TVTYPGSASIGKPAAVYAL 237
T+TYPGSA+IGKPAAVY+L
Sbjct: 484 TITYPGSAAIGKPAAVYSL 502
>WP_016844529.1 porin, partial [Bradyrhizobium elkanii]
Length = 453
Score = 134 bits (338), Expect = 6e-36
Identities = 63/78 (80%), Positives = 68/78 (87%)
Frame = +1
Query: 4 GTGVGGSFGILLGATSNLTSCNPDYSIAQIGTQTQWTPVKNLTFSADFTYTHLDQNYAGT 183
GTGVGGS A SNLTSCNPDYSIAQIGTQTQWTPVKNLTFSADFTYT LDQ++AGT
Sbjct: 360 GTGVGGSLSNFFSAASNLTSCNPDYSIAQIGTQTQWTPVKNLTFSADFTYTRLDQSFAGT 419
Query: 184 VTYPGSASIGKPAAVYAL 237
+T+PG+A IGKPAAVY L
Sbjct: 420 LTFPGAAGIGKPAAVYEL 437
>WP_066515986.1 polymerase [Bradyrhizobium sp. BR 10303] KWV43945.1 polymerase
[Bradyrhizobium sp. BR 10303]
Length = 523
Score = 135 bits (339), Expect = 1e-35
Identities = 62/78 (79%), Positives = 69/78 (88%)
Frame = +1
Query: 4 GTGVGGSFGILLGATSNLTSCNPDYSIAQIGTQTQWTPVKNLTFSADFTYTHLDQNYAGT 183
G GVGGS G S+LTSCNPDY+IAQ+GTQTQWTPVKNLTFSADFTYTHLDQN+AGT
Sbjct: 430 GNGVGGSLSNFFGPGSSLTSCNPDYNIAQLGTQTQWTPVKNLTFSADFTYTHLDQNFAGT 489
Query: 184 VTYPGSASIGKPAAVYAL 237
VT+PGS++IGKPAAVY L
Sbjct: 490 VTFPGSSTIGKPAAVYEL 507
>WP_044587760.1 polymerase [Bradyrhizobium sp. LTSPM299] KJC60302.1 polymerase
[Bradyrhizobium sp. LTSPM299]
Length = 518
Score = 134 bits (338), Expect = 1e-35
Identities = 63/78 (80%), Positives = 70/78 (89%)
Frame = +1
Query: 4 GTGVGGSFGILLGATSNLTSCNPDYSIAQIGTQTQWTPVKNLTFSADFTYTHLDQNYAGT 183
GTGVGGSFG + G T+ LTSCNPDY+IAQ+GTQTQWTPVKNLTF+AD T+ HLDQ YAGT
Sbjct: 426 GTGVGGSFGAVFG-TAGLTSCNPDYNIAQLGTQTQWTPVKNLTFTADLTWQHLDQKYAGT 484
Query: 184 VTYPGSASIGKPAAVYAL 237
+TYPGSASIGKPAAVY L
Sbjct: 485 ITYPGSASIGKPAAVYQL 502
>WP_044539031.1 polymerase [Bradyrhizobium sp. LTSP885] KJC45006.1 polymerase
[Bradyrhizobium sp. LTSP885]
Length = 518
Score = 134 bits (338), Expect = 1e-35
Identities = 63/78 (80%), Positives = 70/78 (89%)
Frame = +1
Query: 4 GTGVGGSFGILLGATSNLTSCNPDYSIAQIGTQTQWTPVKNLTFSADFTYTHLDQNYAGT 183
GTGVGGSFG + G T+ LTSCNPDY+IAQ+GTQTQWTPVKNLTF+AD T+ HLDQ YAGT
Sbjct: 426 GTGVGGSFGAVFG-TAGLTSCNPDYNIAQLGTQTQWTPVKNLTFTADLTWQHLDQKYAGT 484
Query: 184 VTYPGSASIGKPAAVYAL 237
+TYPGSASIGKPAAVY L
Sbjct: 485 ITYPGSASIGKPAAVYQL 502
>WP_018270372.1 porin [Bradyrhizobium elkanii] ODM75538.1 polymerase
[Bradyrhizobium elkanii] ODM76032.1 polymerase
[Bradyrhizobium elkanii] OIM93885.1 porin
[Bradyrhizobium elkanii]
Length = 523
Score = 134 bits (338), Expect = 1e-35
Identities = 63/78 (80%), Positives = 68/78 (87%)
Frame = +1
Query: 4 GTGVGGSFGILLGATSNLTSCNPDYSIAQIGTQTQWTPVKNLTFSADFTYTHLDQNYAGT 183
GTGVGGS A SNLTSCNPDYSIAQIGTQTQWTPVKNLTFSADFTYT LDQ++AGT
Sbjct: 430 GTGVGGSLSNFFSAASNLTSCNPDYSIAQIGTQTQWTPVKNLTFSADFTYTRLDQSFAGT 489
Query: 184 VTYPGSASIGKPAAVYAL 237
+T+PG+A IGKPAAVY L
Sbjct: 490 LTFPGAAGIGKPAAVYEL 507
>WP_050404647.1 polymerase [Bradyrhizobium embrapense]
Length = 523
Score = 134 bits (336), Expect = 3e-35
Identities = 62/78 (79%), Positives = 69/78 (88%)
Frame = +1
Query: 4 GTGVGGSFGILLGATSNLTSCNPDYSIAQIGTQTQWTPVKNLTFSADFTYTHLDQNYAGT 183
G GVGG+F LL + LTSCNPDYSIAQIGTQTQWTPVKNLTF+ADFTYTHLDQ++AGT
Sbjct: 430 GNGVGGTFAPLLVGGAALTSCNPDYSIAQIGTQTQWTPVKNLTFTADFTYTHLDQSFAGT 489
Query: 184 VTYPGSASIGKPAAVYAL 237
+ YPGSASIGKPAA+Y L
Sbjct: 490 IAYPGSASIGKPAAIYEL 507
>SEE31870.1 Porin subfamily protein [Bradyrhizobium erythrophlei]
Length = 517
Score = 133 bits (335), Expect = 4e-35
Identities = 62/78 (79%), Positives = 70/78 (89%)
Frame = +1
Query: 4 GTGVGGSFGILLGATSNLTSCNPDYSIAQIGTQTQWTPVKNLTFSADFTYTHLDQNYAGT 183
G GVGGSFG + G T+ LTSCNP+YSIAQ+GTQTQWTPVKNLTF+ADFTYT LDQ+YAGT
Sbjct: 425 GNGVGGSFGAIFG-TAGLTSCNPNYSIAQLGTQTQWTPVKNLTFTADFTYTRLDQSYAGT 483
Query: 184 VTYPGSASIGKPAAVYAL 237
+TYPGSA+IGKPA VY L
Sbjct: 484 ITYPGSAAIGKPATVYEL 501
>WP_066510372.1 polymerase [Bradyrhizobium sp. BR 10303] KWV51768.1 polymerase
[Bradyrhizobium sp. BR 10303]
Length = 517
Score = 131 bits (329), Expect = 3e-34
Identities = 61/80 (76%), Positives = 71/80 (88%), Gaps = 2/80 (2%)
Frame = +1
Query: 4 GTGVGGSFGILLGAT--SNLTSCNPDYSIAQIGTQTQWTPVKNLTFSADFTYTHLDQNYA 177
GTGV G++G + GA + +TSCNP+YSIAQ+GTQTQWTPVKNLTFSADFTYTHLDQNYA
Sbjct: 422 GTGVDGTWGAVFGAAGVAGMTSCNPNYSIAQLGTQTQWTPVKNLTFSADFTYTHLDQNYA 481
Query: 178 GTVTYPGSASIGKPAAVYAL 237
GT+ +PG+ASIGKPAAVY L
Sbjct: 482 GTLAFPGTASIGKPAAVYEL 501
>SDF86888.1 Porin subfamily protein [Bradyrhizobium sp. R5]
Length = 523
Score = 131 bits (329), Expect = 3e-34
Identities = 62/78 (79%), Positives = 67/78 (85%)
Frame = +1
Query: 4 GTGVGGSFGILLGATSNLTSCNPDYSIAQIGTQTQWTPVKNLTFSADFTYTHLDQNYAGT 183
G GVGGS GA S LTSCNPDYSIAQ+GTQTQWTPVKNLTFSADFTYT LDQ++AGT
Sbjct: 430 GNGVGGSLSNFFGAGSALTSCNPDYSIAQLGTQTQWTPVKNLTFSADFTYTRLDQSFAGT 489
Query: 184 VTYPGSASIGKPAAVYAL 237
V +PGSA+IGKPAAVY L
Sbjct: 490 VAFPGSAAIGKPAAVYEL 507
>WP_038386466.1 polymerase [Bradyrhizobium elkanii]
Length = 523
Score = 131 bits (329), Expect = 3e-34
Identities = 62/78 (79%), Positives = 67/78 (85%)
Frame = +1
Query: 4 GTGVGGSFGILLGATSNLTSCNPDYSIAQIGTQTQWTPVKNLTFSADFTYTHLDQNYAGT 183
G GVGGS GA S LTSCNPDYSIAQ+GTQTQWTPVKNLTFSADFTYT LDQ++AGT
Sbjct: 430 GNGVGGSLSNFFGAGSALTSCNPDYSIAQLGTQTQWTPVKNLTFSADFTYTRLDQSFAGT 489
Query: 184 VTYPGSASIGKPAAVYAL 237
V +PGSA+IGKPAAVY L
Sbjct: 490 VAFPGSAAIGKPAAVYEL 507
>WP_029078292.1 polymerase [Bradyrhizobium sp. th.b2]
Length = 523
Score = 131 bits (329), Expect = 3e-34
Identities = 61/78 (78%), Positives = 66/78 (84%)
Frame = +1
Query: 4 GTGVGGSFGILLGATSNLTSCNPDYSIAQIGTQTQWTPVKNLTFSADFTYTHLDQNYAGT 183
G GVGGS GA SNLTSCNPDYSIAQIGTQTQWTPVKNLTFSADFTYT LDQ++AGT
Sbjct: 430 GNGVGGSLSNFFGAGSNLTSCNPDYSIAQIGTQTQWTPVKNLTFSADFTYTRLDQSFAGT 489
Query: 184 VTYPGSASIGKPAAVYAL 237
V +PGS +IGKP A+Y L
Sbjct: 490 VAFPGSPTIGKPGAIYEL 507
>WP_028334471.1 polymerase [Bradyrhizobium elkanii]
Length = 523
Score = 131 bits (329), Expect = 3e-34
Identities = 62/78 (79%), Positives = 67/78 (85%)
Frame = +1
Query: 4 GTGVGGSFGILLGATSNLTSCNPDYSIAQIGTQTQWTPVKNLTFSADFTYTHLDQNYAGT 183
G GVGGS GA S LTSCNPDYSIAQ+GTQTQWTPVKNLTFSADFTYT LDQ++AGT
Sbjct: 430 GNGVGGSLSNFFGAGSALTSCNPDYSIAQLGTQTQWTPVKNLTFSADFTYTRLDQSFAGT 489
Query: 184 VTYPGSASIGKPAAVYAL 237
V +PGSA+IGKPAAVY L
Sbjct: 490 VAFPGSATIGKPAAVYEL 507
>WP_076862717.1 porin [Bradyrhizobium sp. SEMIA 6399]
Length = 517
Score = 130 bits (328), Expect = 4e-34
Identities = 61/78 (78%), Positives = 67/78 (85%)
Frame = +1
Query: 4 GTGVGGSFGILLGATSNLTSCNPDYSIAQIGTQTQWTPVKNLTFSADFTYTHLDQNYAGT 183
G GVGGSFG + G T+ LTSCNPDY+IAQIGTQTQWTPVKNLTFSADFTYT LDQ++ GT
Sbjct: 425 GNGVGGSFGAVFG-TAGLTSCNPDYNIAQIGTQTQWTPVKNLTFSADFTYTRLDQSFGGT 483
Query: 184 VTYPGSASIGKPAAVYAL 237
+TYPGSA IGKP VY L
Sbjct: 484 ITYPGSAGIGKPGTVYEL 501