BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza35_contig00023539
         (265 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ERF82197.1 transcription-repair coupling factor (superfamily II ...   100   9e-25
WP_011505276.1 cytochrome c [Nitrobacter hamburgensis] ABE65196....    99   5e-24
WP_011505169.1 cytochrome c [Nitrobacter hamburgensis] ABE64977....    94   3e-22
OJU18465.1 cytochrome C [Afipia sp. 62-7]                              93   1e-21
WP_075791982.1 cytochrome C [Massilia putida]                          92   3e-21
ALK99677.1 cytochrome C [Massilia sp. WG5]                             89   5e-20
WP_044409091.1 MULTISPECIES: cytochrome c [Bradyrhizobiaceae] KI...    86   5e-19
EEF23891.1 conserved hypothetical protein, partial [Ricinus comm...    82   9e-19
SDE63805.1 Cytochrome C oxidase, cbb3-type, subunit III [Massili...    86   1e-18
WP_063606987.1 cytochrome C [Caballeronia jiangsuensis]                81   2e-17
KAK47029.1 cytochrome C [Caballeronia jiangsuensis]                    81   4e-17
WP_029672347.1 cytochrome c [Caballeronia zhejiangensis]               80   7e-17
SAL75678.1 hypothetical protein AWB71_05071 [Burkholderia peredens]    80   9e-17
KDR28414.1 cytochrome C [Caballeronia zhejiangensis]                   80   1e-16
ODV14658.1 cytochrome C [Rhodanobacter sp. SCN 68-63]                  79   4e-16
WP_018508064.1 hypothetical protein [Thiobacillus thioparus]           78   4e-16
EKS72718.1 cytochrome c family protein [Burkholderia sp. SJ98]         78   5e-16
WP_051078898.1 cytochrome c [Burkholderia sp. SJ98]                    78   9e-16
WP_077512998.1 cytochrome C [Rhodanobacter sp. B05]                    78   1e-15
WP_077442584.1 cytochrome C [Rhodanobacter sp. C01]                    77   2e-15

>ERF82197.1 transcription-repair coupling factor (superfamily II helicase)
           [Bradyrhizobium sp. DFCI-1]
          Length = 202

 Score =  100 bits (250), Expect = 9e-25
 Identities = 49/62 (79%), Positives = 53/62 (85%)
 Frame = -2

Query: 264 LKMSGMPALGVGHDDATIWSIVAFVTKLPCLSAEHYKDLVARAPPDEEMEPMNKGNGTKP 85
           LKMSGMPA G+GHDDATIWSIVAFVTKLP LSAEHYKD+VARAPPDEEME   +G   + 
Sbjct: 124 LKMSGMPAWGLGHDDATIWSIVAFVTKLPGLSAEHYKDMVARAPPDEEMEFHGQGGRQEA 183

Query: 84  GK 79
           GK
Sbjct: 184 GK 185


>WP_011505276.1 cytochrome c [Nitrobacter hamburgensis] ABE65196.1 cytochrome c
           family protein (plasmid) [Nitrobacter hamburgensis X14]
          Length = 205

 Score = 99.0 bits (245), Expect = 5e-24
 Identities = 46/80 (57%), Positives = 61/80 (76%)
 Frame = -2

Query: 264 LKMSGMPALGVGHDDATIWSIVAFVTKLPCLSAEHYKDLVARAPPDEEMEPMNKGNGTKP 85
           LKMSGMPA G+GHDD T+WSIVAFV KLP +SA+ YKD+VA+APPDEEME M++G+G   
Sbjct: 124 LKMSGMPAWGLGHDDETLWSIVAFVGKLPGMSAQQYKDIVAKAPPDEEMESMDRGDGHTH 183

Query: 84  GKNEKPGAEMQTEQKGEHKH 25
           G +++  A+   E   + +H
Sbjct: 184 GGHQEHNADPSNEAGPKPRH 203


>WP_011505169.1 cytochrome c [Nitrobacter hamburgensis] ABE64977.1 cytochrome c
           family protein (plasmid) [Nitrobacter hamburgensis X14]
          Length = 206

 Score = 94.4 bits (233), Expect = 3e-22
 Identities = 49/83 (59%), Positives = 61/83 (73%), Gaps = 3/83 (3%)
 Frame = -2

Query: 264 LKMSGMPALGVGHDDATIWSIVAFVTKLPCLSAEHYKDLVARAPPDEEMEPMNKGNG-TK 88
           LKMSGMPA G+GH+DAT+WSIVAFV KL  +SA+ YKD+VA+APPDEEME M +G+G T 
Sbjct: 124 LKMSGMPAWGLGHNDATLWSIVAFVGKLSGMSAQQYKDIVAKAPPDEEMESMGQGDGHTH 183

Query: 87  PGKNEKPGAEMQTE--QKGEHKH 25
            G + +  AE   E   K +H H
Sbjct: 184 AGGHHEHNAEPSKEVSPKPDHHH 206


>OJU18465.1 cytochrome C [Afipia sp. 62-7]
          Length = 203

 Score = 92.8 bits (229), Expect = 1e-21
 Identities = 50/81 (61%), Positives = 56/81 (69%), Gaps = 1/81 (1%)
 Frame = -2

Query: 264 LKMSGMPALGVGHDDATIWSIVAFVTKLPCLSAEHYKDLVARAPPDEEMEPMNKGNGTKP 85
           LKMSGMPA G+GHDDA IWSIVAFVTKLP LS EHYK +VA APPDEEM  M K +G K 
Sbjct: 124 LKMSGMPAWGLGHDDAAIWSIVAFVTKLPGLSEEHYKQMVADAPPDEEMGGM-KMDGDKA 182

Query: 84  GKNEKPGAEM-QTEQKGEHKH 25
           G    P  +    +  G H+H
Sbjct: 183 GTGGNPAQDKGGAKPVGGHQH 203


>WP_075791982.1 cytochrome C [Massilia putida]
          Length = 213

 Score = 92.0 bits (227), Expect = 3e-21
 Identities = 44/80 (55%), Positives = 55/80 (68%)
 Frame = -2

Query: 264 LKMSGMPALGVGHDDATIWSIVAFVTKLPCLSAEHYKDLVARAPPDEEMEPMNKGNGTKP 85
           +KMS MPA G GHDDATIWSIVAFVTKLP L A+ Y+++VA+APPDEEME M     + P
Sbjct: 130 IKMSAMPAWGTGHDDATIWSIVAFVTKLPDLDAKAYREIVAKAPPDEEMESMEHDAKSSP 189

Query: 84  GKNEKPGAEMQTEQKGEHKH 25
            ++     EM   +   H+H
Sbjct: 190 AQHSAVTEEMTGGESTAHQH 209


>ALK99677.1 cytochrome C [Massilia sp. WG5]
          Length = 196

 Score = 88.6 bits (218), Expect = 5e-20
 Identities = 41/63 (65%), Positives = 49/63 (77%)
 Frame = -2

Query: 264 LKMSGMPALGVGHDDATIWSIVAFVTKLPCLSAEHYKDLVARAPPDEEMEPMNKGNGTKP 85
           +KMS MPA G GHDDATIWSIVAFVTKLP L A+ Y+++VA+APPDEEME M       P
Sbjct: 127 IKMSAMPAWGTGHDDATIWSIVAFVTKLPDLDAQAYREIVAKAPPDEEMESMEHDAKNSP 186

Query: 84  GKN 76
           G++
Sbjct: 187 GQH 189


>WP_044409091.1 MULTISPECIES: cytochrome c [Bradyrhizobiaceae] KIZ44809.1
           cytochrome C [Rhodopseudomonas palustris] KQW18029.1
           cytochrome C [Afipia sp. Root123D2]
          Length = 207

 Score = 86.3 bits (212), Expect = 5e-19
 Identities = 42/69 (60%), Positives = 52/69 (75%)
 Frame = -2

Query: 264 LKMSGMPALGVGHDDATIWSIVAFVTKLPCLSAEHYKDLVARAPPDEEMEPMNKGNGTKP 85
           LKM+ MPA G+GHDD TIWSIVAFV KLP +S + YKD+VA+APPDEEM  M++G G   
Sbjct: 124 LKMTAMPAWGLGHDDDTIWSIVAFVQKLPGMSPQDYKDIVAKAPPDEEMGSMDQGGG--- 180

Query: 84  GKNEKPGAE 58
           G   + G+E
Sbjct: 181 GNQHQHGSE 189


>EEF23891.1 conserved hypothetical protein, partial [Ricinus communis]
          Length = 92

 Score = 82.4 bits (202), Expect = 9e-19
 Identities = 41/72 (56%), Positives = 53/72 (73%)
 Frame = -2

Query: 264 LKMSGMPALGVGHDDATIWSIVAFVTKLPCLSAEHYKDLVARAPPDEEMEPMNKGNGTKP 85
           +KMSGMPA G GHDDAT+WSIVAFV KLP ++   Y+++V++APPDEEME M KG    P
Sbjct: 14  IKMSGMPAWGHGHDDATLWSIVAFVNKLPTMTPAQYQEIVSKAPPDEEMEEM-KGE-KSP 71

Query: 84  GKNEKPGAEMQT 49
            ++ K G  + T
Sbjct: 72  HEHGKSGKSLTT 83


>SDE63805.1 Cytochrome C oxidase, cbb3-type, subunit III [Massilia sp. PDC64]
          Length = 209

 Score = 85.5 bits (210), Expect = 1e-18
 Identities = 42/67 (62%), Positives = 49/67 (73%)
 Frame = -2

Query: 264 LKMSGMPALGVGHDDATIWSIVAFVTKLPCLSAEHYKDLVARAPPDEEMEPMNKGNGTKP 85
           +KMSGMPA G GHDDAT+WSIVAFV KLP ++ E YKD+V+RAPPDEEME M    G K 
Sbjct: 127 VKMSGMPAWGRGHDDATLWSIVAFVNKLPGMTPEQYKDIVSRAPPDEEMEGM---EGAKA 183

Query: 84  GKNEKPG 64
             +   G
Sbjct: 184 SSDASAG 190


>WP_063606987.1 cytochrome C [Caballeronia jiangsuensis]
          Length = 182

 Score = 81.3 bits (199), Expect = 2e-17
 Identities = 44/85 (51%), Positives = 54/85 (63%), Gaps = 5/85 (5%)
 Frame = -2

Query: 264 LKMSGMPALGVGHDDATIWSIVAFVTKLPCLSAEHYKDLVARAPPDEEMEPMNKGNGTK- 88
           LKMS MPA G  HDD TIWS+VAFV KLP +S + YKD+VA+APPDEEME M    G K 
Sbjct: 95  LKMSAMPAWGKTHDDDTIWSMVAFVNKLPNMSPQEYKDMVAKAPPDEEMEGMKDMPGMKS 154

Query: 87  ---PGKNEKPGA-EMQTEQKGEHKH 25
              P ++ K  A  ++  +   H H
Sbjct: 155 MHGPAEDAKNDASSLRGPEASHHAH 179


>KAK47029.1 cytochrome C [Caballeronia jiangsuensis]
          Length = 211

 Score = 81.3 bits (199), Expect = 4e-17
 Identities = 44/85 (51%), Positives = 54/85 (63%), Gaps = 5/85 (5%)
 Frame = -2

Query: 264 LKMSGMPALGVGHDDATIWSIVAFVTKLPCLSAEHYKDLVARAPPDEEMEPMNKGNGTK- 88
           LKMS MPA G  HDD TIWS+VAFV KLP +S + YKD+VA+APPDEEME M    G K 
Sbjct: 124 LKMSAMPAWGKTHDDDTIWSMVAFVNKLPNMSPQEYKDMVAKAPPDEEMEGMKDMPGMKS 183

Query: 87  ---PGKNEKPGA-EMQTEQKGEHKH 25
              P ++ K  A  ++  +   H H
Sbjct: 184 MHGPAEDAKNDASSLRGPEASHHAH 208


>WP_029672347.1 cytochrome c [Caballeronia zhejiangensis]
          Length = 182

 Score = 80.1 bits (196), Expect = 7e-17
 Identities = 41/80 (51%), Positives = 47/80 (58%)
 Frame = -2

Query: 264 LKMSGMPALGVGHDDATIWSIVAFVTKLPCLSAEHYKDLVARAPPDEEMEPMNKGNGTKP 85
           LKMS MPA G  HDD TIWS+VAFV KLP +S + YK++VA APPDEEME M       P
Sbjct: 95  LKMSAMPAWGKTHDDETIWSMVAFVNKLPSMSPQEYKEMVANAPPDEEMESMK----NMP 150

Query: 84  GKNEKPGAEMQTEQKGEHKH 25
           G     GA    +      H
Sbjct: 151 GMKSMHGAAEDAKNDATSSH 170


>SAL75678.1 hypothetical protein AWB71_05071 [Burkholderia peredens]
          Length = 211

 Score = 80.5 bits (197), Expect = 9e-17
 Identities = 38/59 (64%), Positives = 44/59 (74%)
 Frame = -2

Query: 264 LKMSGMPALGVGHDDATIWSIVAFVTKLPCLSAEHYKDLVARAPPDEEMEPMNKGNGTK 88
           LKMS MPA G  HDD TIWS+VAFV KLP +S + YK++VA+APPDEEME M    G K
Sbjct: 124 LKMSAMPAWGKTHDDETIWSMVAFVNKLPSMSPQEYKEMVAKAPPDEEMESMKNMPGMK 182


>KDR28414.1 cytochrome C [Caballeronia zhejiangensis]
          Length = 211

 Score = 80.1 bits (196), Expect = 1e-16
 Identities = 41/80 (51%), Positives = 47/80 (58%)
 Frame = -2

Query: 264 LKMSGMPALGVGHDDATIWSIVAFVTKLPCLSAEHYKDLVARAPPDEEMEPMNKGNGTKP 85
           LKMS MPA G  HDD TIWS+VAFV KLP +S + YK++VA APPDEEME M       P
Sbjct: 124 LKMSAMPAWGKTHDDETIWSMVAFVNKLPSMSPQEYKEMVANAPPDEEMESMK----NMP 179

Query: 84  GKNEKPGAEMQTEQKGEHKH 25
           G     GA    +      H
Sbjct: 180 GMKSMHGAAEDAKNDATSSH 199


>ODV14658.1 cytochrome C [Rhodanobacter sp. SCN 68-63]
          Length = 198

 Score = 78.6 bits (192), Expect = 4e-16
 Identities = 34/50 (68%), Positives = 43/50 (86%)
 Frame = -2

Query: 264 LKMSGMPALGVGHDDATIWSIVAFVTKLPCLSAEHYKDLVARAPPDEEME 115
           +KMS MPA G  HDDATIWS+VAF+ KLP +SA+ YKD+VARAPPD++M+
Sbjct: 128 IKMSAMPAWGASHDDATIWSMVAFLQKLPGMSAQEYKDIVARAPPDDDMD 177


>WP_018508064.1 hypothetical protein [Thiobacillus thioparus]
          Length = 188

 Score = 78.2 bits (191), Expect = 4e-16
 Identities = 35/58 (60%), Positives = 47/58 (81%)
 Frame = -2

Query: 264 LKMSGMPALGVGHDDATIWSIVAFVTKLPCLSAEHYKDLVARAPPDEEMEPMNKGNGT 91
           LKMS MPA G+ HDD TIWS+VAF+ KLP ++   YK++VA+APPD++MEP + GNG+
Sbjct: 124 LKMSAMPAWGMSHDDPTIWSMVAFLKKLPSMTPAQYKEMVAKAPPDDDMEPAD-GNGS 180


>EKS72718.1 cytochrome c family protein [Burkholderia sp. SJ98]
          Length = 182

 Score = 77.8 bits (190), Expect = 5e-16
 Identities = 42/84 (50%), Positives = 52/84 (61%), Gaps = 12/84 (14%)
 Frame = -2

Query: 264 LKMSGMPALGVGHDDATIWSIVAFVTKLPCLSAEHYKDLVARAPPDEEMEPMNKGNGTK- 88
           LKMS MPA G  HDD TIWS+VAF+ KLP +SA+ Y +LV++APPDEEME M    G K 
Sbjct: 95  LKMSAMPAWGKTHDDETIWSMVAFLNKLPGMSAQQYTNLVSQAPPDEEMEGMQGMPGMKG 154

Query: 87  -----------PGKNEKPGAEMQT 49
                      P  ++ P A+ QT
Sbjct: 155 MHGGAETAKRDPSHSDSPKADHQT 178


>WP_051078898.1 cytochrome c [Burkholderia sp. SJ98]
          Length = 211

 Score = 77.8 bits (190), Expect = 9e-16
 Identities = 42/84 (50%), Positives = 52/84 (61%), Gaps = 12/84 (14%)
 Frame = -2

Query: 264 LKMSGMPALGVGHDDATIWSIVAFVTKLPCLSAEHYKDLVARAPPDEEMEPMNKGNGTK- 88
           LKMS MPA G  HDD TIWS+VAF+ KLP +SA+ Y +LV++APPDEEME M    G K 
Sbjct: 124 LKMSAMPAWGKTHDDETIWSMVAFLNKLPGMSAQQYTNLVSQAPPDEEMEGMQGMPGMKG 183

Query: 87  -----------PGKNEKPGAEMQT 49
                      P  ++ P A+ QT
Sbjct: 184 MHGGAETAKRDPSHSDSPKADHQT 207


>WP_077512998.1 cytochrome C [Rhodanobacter sp. B05]
          Length = 222

 Score = 77.8 bits (190), Expect = 1e-15
 Identities = 38/74 (51%), Positives = 51/74 (68%), Gaps = 1/74 (1%)
 Frame = -2

Query: 264 LKMSGMPALGVGHDDATIWSIVAFVTKLPCLSAEHYKDLVARAPPDEEME-PMNKGNGTK 88
           +KMS MPA G  HDDATIWS+VAF+ KLP L+   Y+D+VARAPPDE+M+   + G+   
Sbjct: 128 IKMSAMPAWGGSHDDATIWSMVAFLQKLPDLTPAQYQDIVARAPPDEDMDGGHSHGSADA 187

Query: 87  PGKNEKPGAEMQTE 46
            G  + PG +M  +
Sbjct: 188 HGAADMPGMQMPAQ 201


>WP_077442584.1 cytochrome C [Rhodanobacter sp. C01]
          Length = 221

 Score = 77.4 bits (189), Expect = 2e-15
 Identities = 40/71 (56%), Positives = 48/71 (67%), Gaps = 1/71 (1%)
 Frame = -2

Query: 264 LKMSGMPALGVGHDDATIWSIVAFVTKLPCLSAEHYKDLVARAPPDEEM-EPMNKGNGTK 88
           +KMS MPA G  HDDATIWS+VAF+ KLP LS   YKD+VARAPPDE+M E  + G    
Sbjct: 127 IKMSAMPAWGGSHDDATIWSMVAFLQKLPDLSPAQYKDIVARAPPDEDMDEASDHGEVDA 186

Query: 87  PGKNEKPGAEM 55
            G  +  G +M
Sbjct: 187 HGAADMQGMQM 197