BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza35_contig00021133
         (2788 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_004489339.1 PREDICTED: chloroplastic group IIA intron splicin...  1229   0.0  
XP_019442595.1 PREDICTED: CRM-domain containing factor CFM2, chl...  1120   0.0  
OIW12416.1 hypothetical protein TanjilG_04165 [Lupinus angustifo...  1114   0.0  
XP_015967744.1 PREDICTED: CRM-domain containing factor CFM2, chl...  1097   0.0  
XP_016203225.1 PREDICTED: CRM-domain containing factor CFM2, chl...  1092   0.0  
XP_003618343.2 group IIA intron splicing facilitator CRS1 [Medic...  1083   0.0  
XP_003554854.1 PREDICTED: chloroplastic group IIA intron splicin...  1052   0.0  
KRG93411.1 hypothetical protein GLYMA_19G014100 [Glycine max]        1045   0.0  
XP_007151135.1 hypothetical protein PHAVU_004G020800g [Phaseolus...  1043   0.0  
KHN16352.1 Chloroplastic group IIA intron splicing facilitator C...   950   0.0  
XP_003554853.1 PREDICTED: chloroplastic group IIA intron splicin...   950   0.0  
KJB33714.1 hypothetical protein B456_006G027700 [Gossypium raimo...   939   0.0  
XP_018823102.1 PREDICTED: CRM-domain containing factor CFM2, chl...   936   0.0  
XP_012483760.1 PREDICTED: chloroplastic group IIA intron splicin...   935   0.0  
XP_016672839.1 PREDICTED: CRM-domain containing factor CFM2, chl...   935   0.0  
XP_012483761.1 PREDICTED: chloroplastic group IIA intron splicin...   935   0.0  
CBI34982.3 unnamed protein product, partial [Vitis vinifera]          935   0.0  
XP_002275511.1 PREDICTED: CRM-domain containing factor CFM2, chl...   935   0.0  
XP_016672841.1 PREDICTED: CRM-domain containing factor CFM2, chl...   934   0.0  
XP_010660973.1 PREDICTED: CRM-domain containing factor CFM2, chl...   934   0.0  

>XP_004489339.1 PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic isoform X1 [Cicer arietinum]
          Length = 1019

 Score = 1229 bits (3180), Expect = 0.0
 Identities = 660/949 (69%), Positives = 728/949 (76%), Gaps = 86/949 (9%)
 Frame = -3

Query: 2591 TKTLDPT---KFVIRCSGSETRTVPDSAIQRIADKLRSLGITDHQSPXXXXXXXXXA-GE 2424
            +KTL  T   KF+ R S S++RT+P+SAIQRIADKL+SLGIT  QS            GE
Sbjct: 24   SKTLTLTHSSKFIFRISASKSRTLPESAIQRIADKLQSLGITTEQSTTTKNTISTTIAGE 83

Query: 2423 IFVPLPHQLPKQRVGHTIDQSWSTPENPVP--GKGFAALSENEVEKQRRQNXXXXXXXXX 2250
            IFVPLPH LPK RVGHT+D SWSTPENPVP  G G   LSENEVE+QR +          
Sbjct: 84   IFVPLPHNLPKYRVGHTLDPSWSTPENPVPFPGAGIEKLSENEVERQRLERAKAREEKKR 143

Query: 2249 XXXRVEAPTVAELSLTEAEIMRLRKLGFGMKKKLKVGKAGITEGIVNGIHERWRSHEVVK 2070
                   PT+AELSLT+ EIMRL KLGF MK+K+KVGKAGITEGIVNGIHERWR  EVV+
Sbjct: 144  -----RVPTLAELSLTDGEIMRLTKLGFEMKQKIKVGKAGITEGIVNGIHERWRRSEVVR 198

Query: 2069 IVCEDLCRTNMKRTHDLLERKTGGLVVWRSGSKIILYRGIDYKYPYFLSDKVLRDENNGD 1890
            IVCEDLCR NMKRTHD+LERKTGGLVVWRSGSKIILYRGIDYKYPYFLSDKVLRD+   D
Sbjct: 199  IVCEDLCRINMKRTHDILERKTGGLVVWRSGSKIILYRGIDYKYPYFLSDKVLRDDKIDD 258

Query: 1889 AMQHMDGDDKNCNEKESHSSEMNSATHAGQNSNFKTAKPALIQGVGTPNKVRFQLPGEAE 1710
            A+QHMDGDDKNC+E+ES+SSEMNS THA  +SN +T KPAL+QGVGTPNKVRFQLPGEAE
Sbjct: 259  ALQHMDGDDKNCDERESYSSEMNSTTHASHSSNIRTVKPALVQGVGTPNKVRFQLPGEAE 318

Query: 1709 LVEDADKLLEGLGPQFTDWWGYDPLPVDADLLPAVIPGFRKPFRLLPYGVKSKLTDDEMT 1530
            L+E+ D LLEGLGP+FTDWWGYDP+PVDADLLPAVIPGFR+PFRLLPYGVKS LTDDE+T
Sbjct: 319  LLEEVDSLLEGLGPRFTDWWGYDPVPVDADLLPAVIPGFRQPFRLLPYGVKSNLTDDELT 378

Query: 1529 TLRRLGRPLPSHFALGRNMKLQGLAAAIIKLWERCEIVKIAVKRGVQNTDSETMAEEIKY 1350
            TL+RLGRPLP HFALGRN KLQGLAAAIIKLWERCEI KIAVKRGVQNT ++ MAEEIK+
Sbjct: 379  TLKRLGRPLPCHFALGRNRKLQGLAAAIIKLWERCEIAKIAVKRGVQNTSNKIMAEEIKH 438

Query: 1349 LTGGTLLSRNNEFIVFYRGKDFLPAAVSSAIEQRRNIVTNKLKAENSSSDAV-------- 1194
            LTGGTLLSR+ + IV YRGKDFLPAA SSAI+QRRN++ NK+KAENSSS  V        
Sbjct: 439  LTGGTLLSRDKDVIVIYRGKDFLPAAASSAIQQRRNVLINKVKAENSSSVTVSPHSEAKD 498

Query: 1193 ---------IKQRMFTKAEAALKRTSNKLSMXXXXXXXXXXXXXXXXXXXSPPEQEIVKE 1041
                     I++R+ TKA+AA+KRTS KLS                    SP EQEI KE
Sbjct: 499  MAFLKDTEIIEKRIMTKAKAAIKRTSIKLSQALEKKAKAEKLLAILEKVESPQEQEIDKE 558

Query: 1040 GITEEERYMLRKIGLKMSPFLLLGRRGVFDGTVENMHLHWKYRELVKIICKQGSLESVHQ 861
            GITEEERYMLR+IGLKM PFLLLGRRGVFDGTVENMHLHWKYRELVKIIC QGSLESVHQ
Sbjct: 559  GITEEERYMLRRIGLKMKPFLLLGRRGVFDGTVENMHLHWKYRELVKIICNQGSLESVHQ 618

Query: 860  IARTLEAESGGILVAVERVNKGYAIIVYRGKNYSRPSTLRPQTLLNKKQALKRSIEAQRC 681
             A TLEAESGGILVAVERV+KG+AIIVYRGKNYSRPS LRP+TLLNKKQALKRSIEAQR 
Sbjct: 619  TALTLEAESGGILVAVERVSKGHAIIVYRGKNYSRPSCLRPRTLLNKKQALKRSIEAQRR 678

Query: 680  ESLKLHVLKLDKNINELKRQMVKDEANSKQIAEELRSDMATDRHEACSDSIN-------- 525
            E+LKLHVLKLDKNINELK QMVKDEA+SKQIAE LRSD+A D+H   S+SIN        
Sbjct: 679  EALKLHVLKLDKNINELKLQMVKDEASSKQIAETLRSDLAIDKHGGSSNSINCNSPKEAS 738

Query: 524  ------------------------CNSPKEASVDNQQ----------------------- 486
                                    CNS KEASVDNQQ                       
Sbjct: 739  VHNQQAIEEQHIELIDGVSSNSLNCNSSKEASVDNQQQAIEEQHIELIDGASSNLISSPE 798

Query: 485  --------AIQEQPVELIDSGGARQSEPESSAGLIHKEKQLDEVNDSVVDTGHCVSNNKA 330
                    AIQEQ +ELID+GGARQ EPESSAGL+H+E+QLDE +DSVVDTGHCVSNNKA
Sbjct: 799  EASVGNQRAIQEQYIELIDTGGARQGEPESSAGLVHQERQLDEESDSVVDTGHCVSNNKA 858

Query: 329  MEXXXXXXXXXXXXSAPVIKGSSNELPSTSLYLSNRERLLLRKQALKIKKRPVLAIGKSN 150
            ME            SAPVI  SS ELPS SLYLSNRERLLLR+QAL +KKRP+LAIGKSN
Sbjct: 859  MEASVASLKSDPEPSAPVINKSSIELPSRSLYLSNRERLLLRRQALNMKKRPLLAIGKSN 918

Query: 149  IMTGVAKAINTHFQKHPFAIVNVKGRAKGTSVQEVVSELEQATGAVLVS 3
             +TG+AKAI  HF+KHPF IVNVKGRAKGTSV E+VS+LE ATGAVLVS
Sbjct: 919  TVTGLAKAIKDHFRKHPFVIVNVKGRAKGTSVHELVSKLEHATGAVLVS 967


>XP_019442595.1 PREDICTED: CRM-domain containing factor CFM2, chloroplastic [Lupinus
            angustifolius]
          Length = 1009

 Score = 1120 bits (2896), Expect = 0.0
 Identities = 607/928 (65%), Positives = 698/928 (75%), Gaps = 75/928 (8%)
 Frame = -3

Query: 2561 IRCSGSETRTVPDSAIQRIADKLRSLGITDHQSPXXXXXXXXXAGEIFVPLPHQLPKQRV 2382
            IR S SET+T+P+SAIQRIA+KLRSLGITD  +          AG+IFVPLPHQLPK RV
Sbjct: 36   IRSSASETQTLPNSAIQRIAEKLRSLGITDDATATATPPPTTAAGKIFVPLPHQLPKYRV 95

Query: 2381 GHTIDQSWSTPENPVP--GKGFAALSENEVEKQRRQNXXXXXXXXXXXXRVEAPTVAELS 2208
            GHTID SWST +NPVP  G G + L +NE+    +Q                APT+AEL+
Sbjct: 96   GHTIDSSWSTFDNPVPVPGTGISLLRQNELASVAKQQKKKEVEES------RAPTLAELN 149

Query: 2207 LTEAEIMRLRKLGFG--MKKKLKVGKAGITEGIVNGIHERWRSHEVVKIVCEDLCRTNMK 2034
            L+++EI RL  LG G  MK+KLKVGKAGITEGIVNGIHERW+  EVV+IVCED+ + NMK
Sbjct: 150  LSKSEIRRLTTLGLGLGMKQKLKVGKAGITEGIVNGIHERWQRVEVVRIVCEDISKLNMK 209

Query: 2033 RTHDLLERKTGGLVVWRSGSKIILYRGIDYKYPYFLSDKVLRDENNGDAMQHMD-GDDKN 1857
            RTHDLLERKTGGLVVWRSG K+ILYRG DYKYPYF+SDKV R++N  DA+QH + GDD+N
Sbjct: 210  RTHDLLERKTGGLVVWRSGFKLILYRGADYKYPYFISDKVSRNDNTDDALQHSENGDDQN 269

Query: 1856 CNEKESHSSEMNSATHAGQNSNFKTAKPALIQGVGTPNKVRFQLPGEAELVEDADKLLEG 1677
             + +ESHSSE NSAT A Q+SNF +AKPALI+GVG+PNKVRFQLPGEAEL EDAD+LL G
Sbjct: 270  SDIRESHSSEFNSATSAEQSSNFNSAKPALIEGVGSPNKVRFQLPGEAELAEDADRLLVG 329

Query: 1676 LGPQFTDWWGYDPLPVDADLLPAVIPGFRKPFRLLPYGVKSKLTDDEMTTLRRLGRPLPS 1497
            LGP+FTDWWGYDPLP+DADLLPAV+PG+RKPFRLLPYGV SKLTDDEMTT+RRL RPLP 
Sbjct: 330  LGPRFTDWWGYDPLPIDADLLPAVVPGYRKPFRLLPYGVSSKLTDDEMTTMRRLARPLPC 389

Query: 1496 HFALGRNMKLQGLAAAIIKLWERCEIVKIAVKRGVQNTDSETMAEEIKYLTGGTLLSRNN 1317
            HFALGRN K QGLAAAIIKLWERCEI KIA+KRGVQNT+SE MAEE+KYLTGGTLL+R+ 
Sbjct: 390  HFALGRNRKHQGLAAAIIKLWERCEIAKIAIKRGVQNTNSELMAEELKYLTGGTLLARDR 449

Query: 1316 EFIVFYRGKDFLPAAVSSAIEQRRNI--VTNKLKAENSSS-------------------- 1203
            EFIVFYRGKDFLPAAVSSAIE+RRNI    +KLKA+NSSS                    
Sbjct: 450  EFIVFYRGKDFLPAAVSSAIEKRRNIGIYKDKLKAQNSSSVTVTPNLEHGTVECDSEGNG 509

Query: 1202 ------DAVIKQRMFTKAEAALKRTSNKLSMXXXXXXXXXXXXXXXXXXXSPPEQEIVKE 1041
                   AV KQR     EAA+K+TS +LS                    S  EQEI KE
Sbjct: 510  MAFQKDTAVPKQRKLAGVEAAIKKTSIRLSEALERKTNAEKLLAELNNTESLQEQEIDKE 569

Query: 1040 GITEEERYMLRKIGLKMSPFLLLGRRGVFDGTVENMHLHWKYRELVKIICKQGSLESVHQ 861
            GITEEERYMLR+IGLKM PFLLLGRRGV+DGTVENMHLHWKYRELVK++CK GSLE V++
Sbjct: 570  GITEEERYMLRRIGLKMKPFLLLGRRGVYDGTVENMHLHWKYRELVKVLCKPGSLEFVYE 629

Query: 860  IARTLEAESGGILVAVERVNKGYAIIVYRGKNYSRPSTLRPQTLLNKKQALKRSIEAQRC 681
            IARTLEAESGGILVAVER  +GYAIIVYRGKNY RP++LRPQTLL+++ A+KRSIEAQR 
Sbjct: 630  IARTLEAESGGILVAVERARRGYAIIVYRGKNYIRPASLRPQTLLSRRAAMKRSIEAQRR 689

Query: 680  ESLKLHVLKLDKNINELKRQMVKD-EANSKQIAEELRSDMATDRHE--ACSDSINCNSPK 510
            ESLKLHVLKLDKNIN+LK Q+ KD EANSKQI E  + D+A D+ +   CS+SIN +SPK
Sbjct: 690  ESLKLHVLKLDKNINQLKLQLDKDKEANSKQIEEVTKLDLAADKDKDGVCSNSINLDSPK 749

Query: 509  EASVDNQQAIQEQPVELIDSGGARQS---------------------------------- 432
            EA V+NQQ +QE+ +ELID GG ++                                   
Sbjct: 750  EACVENQQPVQEEQLELIDDGGIQEQQLELIDDGGVQEQQLQLTGDGGIQEQQLQLIGDG 809

Query: 431  -----EPESSAGLIHKEKQLDEVNDSVVDTGHCVSNNKAMEXXXXXXXXXXXXSAPVIKG 267
                 EPE  A LIHKE QL  V+DSVV+T HCVSNNK +E            SAP+I  
Sbjct: 810  EDYRHEPEPWASLIHKETQLAGVSDSVVETEHCVSNNKEIEPSVTSSKSDPEPSAPMINR 869

Query: 266  SSNELPSTSLYLSNRERLLLRKQALKIKKRPVLAIGKSNIMTGVAKAINTHFQKHPFAIV 87
            SSN+LPS S++LSN+ERLLLRKQAL +KKRPVLA+GKSN +TGVAK INTHF+KHPFAIV
Sbjct: 870  SSNKLPSRSVHLSNKERLLLRKQALMMKKRPVLAVGKSNTVTGVAKTINTHFKKHPFAIV 929

Query: 86   NVKGRAKGTSVQEVVSELEQATGAVLVS 3
            NVKGRAKGTSVQEVV +LEQATGAVLVS
Sbjct: 930  NVKGRAKGTSVQEVVLKLEQATGAVLVS 957


>OIW12416.1 hypothetical protein TanjilG_04165 [Lupinus angustifolius]
          Length = 986

 Score = 1114 bits (2881), Expect = 0.0
 Identities = 600/905 (66%), Positives = 696/905 (76%), Gaps = 52/905 (5%)
 Frame = -3

Query: 2561 IRCSGSETRTVPDSAIQRIADKLRSLGITDHQSPXXXXXXXXXAGEIFVPLPHQLPKQRV 2382
            IR S SET+T+P+SAIQRIA+KLRSLGITD  +          AG+IFVPLPHQLPK RV
Sbjct: 36   IRSSASETQTLPNSAIQRIAEKLRSLGITDDATATATPPPTTAAGKIFVPLPHQLPKYRV 95

Query: 2381 GHTIDQSWSTPENPVP--GKGFAALSENEVEKQRRQNXXXXXXXXXXXXRVEAPTVAELS 2208
            GHTID SWST +NPVP  G G + L +NE+    +Q                APT+AEL+
Sbjct: 96   GHTIDSSWSTFDNPVPVPGTGISLLRQNELASVAKQQKKKEVEES------RAPTLAELN 149

Query: 2207 LTEAEIMRLRKLGFG--MKKKLKVGKAGITEGIVNGIHERWRSHEVVKIVCEDLCRTNMK 2034
            L+++EI RL  LG G  MK+KLKVGKAGITEGIVNGIHERW+  EVV+IVCED+ + NMK
Sbjct: 150  LSKSEIRRLTTLGLGLGMKQKLKVGKAGITEGIVNGIHERWQRVEVVRIVCEDISKLNMK 209

Query: 2033 RTHDLLERKTGGLVVWRSGSKIILYRGIDYKYPYFLSDKVLRDENNGDAMQHMD-GDDKN 1857
            RTHDLLERKTGGLVVWRSG K+ILYRG DYKYPYF+SDKV R++N  DA+QH + GDD+N
Sbjct: 210  RTHDLLERKTGGLVVWRSGFKLILYRGADYKYPYFISDKVSRNDNTDDALQHSENGDDQN 269

Query: 1856 CNEKESHSSEMNSATHAGQNSNFKTAKPALIQGVGTPNKVRFQLPGEAELVEDADKLLEG 1677
             + +ESHSSE NSAT A Q+SNF +AKPALI+GVG+PNKVRFQLPGEAEL EDAD+LL G
Sbjct: 270  SDIRESHSSEFNSATSAEQSSNFNSAKPALIEGVGSPNKVRFQLPGEAELAEDADRLLVG 329

Query: 1676 LGPQFTDWWGYDPLPVDADLLPAVIPGFRKPFRLLPYGVKSKLTDDEMTTLRRLGRPLPS 1497
            LGP+FTDWWGYDPLP+DADLLPAV+PG+RKPFRLLPYGV SKLTDDEMTT+RRL RPLP 
Sbjct: 330  LGPRFTDWWGYDPLPIDADLLPAVVPGYRKPFRLLPYGVSSKLTDDEMTTMRRLARPLPC 389

Query: 1496 HFALGRNMKLQGLAAAIIKLWERCEIVKIAVKRGVQNTDSETMAEEIKYLTGGTLLSRNN 1317
            HFALGRN K QGLAAAIIKLWERCEI KIA+KRGVQNT+SE MAEE+KYLTGGTLL+R+ 
Sbjct: 390  HFALGRNRKHQGLAAAIIKLWERCEIAKIAIKRGVQNTNSELMAEELKYLTGGTLLARDR 449

Query: 1316 EFIVFYRGKDFLPAAVSSAIEQRRN--IVTNKLKAENSSS-------------------- 1203
            EFIVFYRGKDFLPAAVSSAIE+RRN  I  +KLKA+NSSS                    
Sbjct: 450  EFIVFYRGKDFLPAAVSSAIEKRRNIGIYKDKLKAQNSSSVTVTPNLEHGTVECDSEGNG 509

Query: 1202 ------DAVIKQRMFTKAEAALKRTSNKLSMXXXXXXXXXXXXXXXXXXXSPPEQEIVKE 1041
                   AV KQR     EAA+K+TS +LS                    S  EQEI KE
Sbjct: 510  MAFQKDTAVPKQRKLAGVEAAIKKTSIRLSEALERKTNAEKLLAELNNTESLQEQEIDKE 569

Query: 1040 GITEEERYMLRKIGLKMSPFLLLGRRGVFDGTVENMHLHWKYRELVKIICKQGSLESVHQ 861
            GITEEERYMLR+IGLKM PFLLLGRRGV+DGTVENMHLHWKYRELVK++CK GSLE V++
Sbjct: 570  GITEEERYMLRRIGLKMKPFLLLGRRGVYDGTVENMHLHWKYRELVKVLCKPGSLEFVYE 629

Query: 860  IARTLEAESGGILVAVERVNKGYAIIVYRGKNYSRPSTLRPQTLLNKKQALKRSIEAQRC 681
            IARTLEAESGGILVAVER  +GYAIIVYRGKNY RP++LRPQTLL+++ A+KRSIEAQR 
Sbjct: 630  IARTLEAESGGILVAVERARRGYAIIVYRGKNYIRPASLRPQTLLSRRAAMKRSIEAQRR 689

Query: 680  ESLKLHVLKLDKNINELKRQMVKD-EANSKQIAEELRSDMATDRHE--ACSDSINCNSPK 510
            ESLKLHVLKLDKNIN+LK Q+ KD EANSKQI E  + D+A D+ +   CS+SIN +SPK
Sbjct: 690  ESLKLHVLKLDKNINQLKLQLDKDKEANSKQIEEVTKLDLAADKDKDGVCSNSINLDSPK 749

Query: 509  EASVDNQQAIQEQPVELIDSGGARQSEPE---------------SSAGLIHKEKQL-DEV 378
            EA V+NQQ +QE+ +ELID GG ++ + E                  G+  ++ QL  +V
Sbjct: 750  EACVENQQPVQEEQLELIDDGGIQEQQLELIDDGGVQEQQLQLTGDGGIQEQQLQLIGDV 809

Query: 377  NDSVVDTGHCVSNNKAMEXXXXXXXXXXXXSAPVIKGSSNELPSTSLYLSNRERLLLRKQ 198
            +DSVV+T HCVSNNK +E            SAP+I  SSN+LPS S++LSN+ERLLLRKQ
Sbjct: 810  SDSVVETEHCVSNNKEIEPSVTSSKSDPEPSAPMINRSSNKLPSRSVHLSNKERLLLRKQ 869

Query: 197  ALKIKKRPVLAIGKSNIMTGVAKAINTHFQKHPFAIVNVKGRAKGTSVQEVVSELEQATG 18
            AL +KKRPVLA+GKSN +TGVAK INTHF+KHPFAIVNVKGRAKGTSVQEVV +LEQATG
Sbjct: 870  ALMMKKRPVLAVGKSNTVTGVAKTINTHFKKHPFAIVNVKGRAKGTSVQEVVLKLEQATG 929

Query: 17   AVLVS 3
            AVLVS
Sbjct: 930  AVLVS 934


>XP_015967744.1 PREDICTED: CRM-domain containing factor CFM2, chloroplastic [Arachis
            duranensis]
          Length = 984

 Score = 1097 bits (2836), Expect = 0.0
 Identities = 593/894 (66%), Positives = 680/894 (76%), Gaps = 38/894 (4%)
 Frame = -3

Query: 2570 KFVIRCS----GSETRTVPDSAIQRIADKLRSLGITDHQ------SPXXXXXXXXXAGEI 2421
            KF+IRCS     ++ +T+P SAIQRIADKLRSLG  D        SP         AGEI
Sbjct: 43   KFLIRCSKLEPATDAQTLPTSAIQRIADKLRSLGFVDQAPASSGASPPSSSSAAVTAGEI 102

Query: 2420 FVPLPHQLPKQRVGHTIDQSWSTPENPVPGKGFAALSENEVEKQRRQNXXXXXXXXXXXX 2241
            FVPLP +LP  RVGHTID SWSTPENPVP  G A L +NE+ K +++N            
Sbjct: 103  FVPLPTRLPIHRVGHTIDPSWSTPENPVPVPGIALLRQNELAK-KKENAEEKRRRAREEA 161

Query: 2240 RVEAPTVAELSLTEAEIMRLRKLGFGMKKKLKVGKAGITEGIVNGIHERWRSHEVVKIVC 2061
            R  APT+AELSL++AEI RL   G GMK+KLK+GKAGITEGIV GIHERWR  EVV+IVC
Sbjct: 162  RERAPTLAELSLSDAEIRRLTTAGLGMKQKLKIGKAGITEGIVQGIHERWRRSEVVRIVC 221

Query: 2060 EDLCRTNMKRTHDLLERKTGGLVVWRSGSKIILYRGIDYKYPYFLSDKVLRDENNGDAMQ 1881
            ED+C+ NMKRTHDLLERKTGGLVVWRSGSKI+LYRG++YKYPYFLSD+V   +N  DA+Q
Sbjct: 222  EDICKLNMKRTHDLLERKTGGLVVWRSGSKILLYRGVNYKYPYFLSDEVFGHKNIDDALQ 281

Query: 1880 HMD-GDDKNCNEKESHSSEMNSATHAGQNSNFKTAKPALIQGVGTPNKVRFQLPGEAELV 1704
              +  DDK+ +E+ SH+S+MN  T+A Q S+ K AKPALI+GVG  NKVRF+LPGE EL 
Sbjct: 282  LSEHSDDKDFDERHSHASKMNLVTNADQRSDIKAAKPALIKGVGNLNKVRFELPGEVELA 341

Query: 1703 EDADKLLEGLGPQFTDWWGYDPLPVDADLLPAVIPGFRKPFRLLPYGVKSKLTDDEMTTL 1524
             DAD+LL GLGP+FTDWWGYDPLPVDADLLPAVIPG+RKPFRLLPYGVKSKLTDDEMTTL
Sbjct: 342  ADADQLLIGLGPRFTDWWGYDPLPVDADLLPAVIPGYRKPFRLLPYGVKSKLTDDEMTTL 401

Query: 1523 RRLGRPLPSHFALGRNMKLQGLAAAIIKLWERCEIVKIAVKRGVQNTDSETMAEEIKYLT 1344
            RRLG+PLP HFALGRN K QGLAAAIIKLWERCEIVKIA+KRGVQNT+SE MAEEIK+LT
Sbjct: 402  RRLGKPLPCHFALGRNRKHQGLAAAIIKLWERCEIVKIAIKRGVQNTNSEIMAEEIKHLT 461

Query: 1343 GGTLLSRNNEFIVFYRGKDFLPAAVSSAIEQRRNIVTNKLKAENSSS------------- 1203
            GGTLL+R+ EFIV YRGKDFLP+AVSSAI++RRNI  +KLKAE+SSS             
Sbjct: 462  GGTLLARDREFIVLYRGKDFLPSAVSSAIDERRNIELSKLKAESSSSVTVTPGQKHGAIE 521

Query: 1202 -------------DAVIKQRMFTKAEAALKRTSNKLSMXXXXXXXXXXXXXXXXXXXSPP 1062
                          A+++Q MFT AEA +KR S KLSM                    P 
Sbjct: 522  CVSEGSGTTSQKGTAIVEQGMFTDAEATIKRNSIKLSMALERKAKAEKLLAELENAECPQ 581

Query: 1061 EQEIVKEGITEEERYMLRKIGLKMSPFLLLGRRGVFDGTVENMHLHWKYRELVKIICKQG 882
            E+EI KEGITEEERYMLRKIGLKM PFLLLGRRGVFDGTVENMHLHWKYRELVKIIC + 
Sbjct: 582  EKEIDKEGITEEERYMLRKIGLKMKPFLLLGRRGVFDGTVENMHLHWKYRELVKIICNRQ 641

Query: 881  SLESVHQIARTLEAESGGILVAVERVNKGYAIIVYRGKNYSRPSTLRPQTLLNKKQALKR 702
            S E++HQIA+TLEAESGGIL+AVERVNKGYA+IVYRGKNYSRP++LRP+TLLNKK ALKR
Sbjct: 642  SPEAIHQIAQTLEAESGGILIAVERVNKGYAVIVYRGKNYSRPASLRPKTLLNKKAALKR 701

Query: 701  SIEAQRCESLKLHVLKLDKNINELKRQMVKD-EANSKQIAEELRSDMATDRHEACSDSIN 525
             +EAQR ESLKLHVLKLDKNI +LK +M KD EANSK  AEE+R DM      + S+S+N
Sbjct: 702  FLEAQRRESLKLHVLKLDKNIKDLKLKMDKDKEANSKHEAEEMRVDMG-----SFSNSVN 756

Query: 524  CNSPKEASVDNQQAIQEQPVELIDSGGARQSEPESSAGLIHKEKQLDEVNDSVVDTGHCV 345
             NS KE S++NQ++ Q+Q   +ID  G RQ E ES + LI ++ QLD V+ S VDT H +
Sbjct: 757  LNSLKEVSIENQESRQKQ---MIDDDGTRQGEEESMSDLIIEKTQLDGVSVSAVDTRHGI 813

Query: 344  SNNKAMEXXXXXXXXXXXXSAPVIKGSSNELPSTSLYLSNRERLLLRKQALKIKKRPVLA 165
            SNN   E            S PVI  SS  LP   +YLSNRERLLLR+QALK+ KRPVLA
Sbjct: 814  SNNNPPESYDTSSKCDPEPSVPVINRSSKGLPIRPVYLSNRERLLLRRQALKMTKRPVLA 873

Query: 164  IGKSNIMTGVAKAINTHFQKHPFAIVNVKGRAKGTSVQEVVSELEQATGAVLVS 3
            IGKSNI+TGVAKAI THFQKHP AIVN+KGRAKGTSVQEVV +LEQATGAVLVS
Sbjct: 874  IGKSNIVTGVAKAIKTHFQKHPLAIVNIKGRAKGTSVQEVVFKLEQATGAVLVS 927


>XP_016203225.1 PREDICTED: CRM-domain containing factor CFM2, chloroplastic [Arachis
            ipaensis]
          Length = 984

 Score = 1092 bits (2824), Expect = 0.0
 Identities = 592/894 (66%), Positives = 678/894 (75%), Gaps = 38/894 (4%)
 Frame = -3

Query: 2570 KFVIRCS----GSETRTVPDSAIQRIADKLRSLGITDHQ------SPXXXXXXXXXAGEI 2421
            KF+IR S     ++ +T+P SAIQRIADKLRSLG  D        SP         AGEI
Sbjct: 43   KFLIRSSKLEPATDAQTLPTSAIQRIADKLRSLGFVDQAPASSGASPPSSSSAAVTAGEI 102

Query: 2420 FVPLPHQLPKQRVGHTIDQSWSTPENPVPGKGFAALSENEVEKQRRQNXXXXXXXXXXXX 2241
            FVPLP +LP  RVGHTID SWSTPENPVP  G A L +NE+ K R++N            
Sbjct: 103  FVPLPTRLPIHRVGHTIDPSWSTPENPVPVPGIALLRQNELAK-RKENAEEKRRRAREAA 161

Query: 2240 RVEAPTVAELSLTEAEIMRLRKLGFGMKKKLKVGKAGITEGIVNGIHERWRSHEVVKIVC 2061
            R  APT+AELSL++AEI RL   G GMK+KLK+GKAGITEGIV GIHERWR  EVV+IVC
Sbjct: 162  RERAPTLAELSLSDAEIRRLTTAGLGMKQKLKIGKAGITEGIVQGIHERWRRSEVVRIVC 221

Query: 2060 EDLCRTNMKRTHDLLERKTGGLVVWRSGSKIILYRGIDYKYPYFLSDKVLRDENNGDAMQ 1881
            ED+C+ NMKRTHDLLERKTGGLVVWRSGSKI+LYRG+DYKYPYFLSD+V   +N  + +Q
Sbjct: 222  EDICKLNMKRTHDLLERKTGGLVVWRSGSKILLYRGVDYKYPYFLSDEVSGHKNIDNVLQ 281

Query: 1880 HMD-GDDKNCNEKESHSSEMNSATHAGQNSNFKTAKPALIQGVGTPNKVRFQLPGEAELV 1704
              +  DDK+ +E++SH+S+MN  T+A Q S+ K AKPALI+GVG PNKVRF+LPGE E+ 
Sbjct: 282  LSEHSDDKDFDERQSHASKMNLVTNADQRSDIKAAKPALIKGVGNPNKVRFELPGEVEIA 341

Query: 1703 EDADKLLEGLGPQFTDWWGYDPLPVDADLLPAVIPGFRKPFRLLPYGVKSKLTDDEMTTL 1524
             DAD+LL GLGP+FTDWWGYDPLPVDADLLPAVIPG+RKPFRLLPYGVKSKLTDDEMTTL
Sbjct: 342  ADADQLLIGLGPRFTDWWGYDPLPVDADLLPAVIPGYRKPFRLLPYGVKSKLTDDEMTTL 401

Query: 1523 RRLGRPLPSHFALGRNMKLQGLAAAIIKLWERCEIVKIAVKRGVQNTDSETMAEEIKYLT 1344
            RRLG+PLP HFALGRN K QGLAAAIIKLWERCEIVKIA+KRGVQNT+SE MAEEIK+LT
Sbjct: 402  RRLGKPLPCHFALGRNRKHQGLAAAIIKLWERCEIVKIAIKRGVQNTNSEIMAEEIKHLT 461

Query: 1343 GGTLLSRNNEFIVFYRGKDFLPAAVSSAIEQRRNIVTNKLKAENSSSDAV---------- 1194
            GGTLL+R+ EFIV YRGKDFLP+AVSSAI++RRNI  +KLKAE+SSSDAV          
Sbjct: 462  GGTLLARDREFIVLYRGKDFLPSAVSSAIDERRNIELSKLKAESSSSDAVTPGKKHGAIE 521

Query: 1193 ----------------IKQRMFTKAEAALKRTSNKLSMXXXXXXXXXXXXXXXXXXXSPP 1062
                            ++Q MFT AEA +KR S KLSM                    P 
Sbjct: 522  CVSEGSGTTSQKGTAIVEQGMFTDAEATIKRNSIKLSMALERKAKAEKLLAELENAECPQ 581

Query: 1061 EQEIVKEGITEEERYMLRKIGLKMSPFLLLGRRGVFDGTVENMHLHWKYRELVKIICKQG 882
            E+EI KEGITEEERYMLRKIGLKM PFLLLGRRGVFDGTVENMHLHWKYRELVKIIC + 
Sbjct: 582  EKEIDKEGITEEERYMLRKIGLKMKPFLLLGRRGVFDGTVENMHLHWKYRELVKIICNKR 641

Query: 881  SLESVHQIARTLEAESGGILVAVERVNKGYAIIVYRGKNYSRPSTLRPQTLLNKKQALKR 702
            S E +HQIA+TLEAESGGIL+AVERVNKGYA+IVYRGKNYSRP++LRP+TLLNKK ALKR
Sbjct: 642  SPEIIHQIAQTLEAESGGILIAVERVNKGYAVIVYRGKNYSRPASLRPKTLLNKKAALKR 701

Query: 701  SIEAQRCESLKLHVLKLDKNINELKRQMVKD-EANSKQIAEELRSDMATDRHEACSDSIN 525
             +EAQR ESLKLHVLKLDKNI +LK +M KD EANSK  AE +R DM      + S+S+N
Sbjct: 702  FLEAQRRESLKLHVLKLDKNIKDLKLKMDKDKEANSKHEAEGMRVDMG-----SFSNSVN 756

Query: 524  CNSPKEASVDNQQAIQEQPVELIDSGGARQSEPESSAGLIHKEKQLDEVNDSVVDTGHCV 345
             NS KE S++NQ++ Q+Q   +ID  G RQ E ES + LI ++ QLD V+ S VDT H +
Sbjct: 757  LNSLKEVSIENQESRQKQ---MIDDDGTRQGEEESMSDLIIEKTQLDGVSVSAVDTRHGI 813

Query: 344  SNNKAMEXXXXXXXXXXXXSAPVIKGSSNELPSTSLYLSNRERLLLRKQALKIKKRPVLA 165
            SNN   E            S PV   SS  LP   +YLSNRERLLLR+QALK+ KRPVLA
Sbjct: 814  SNNNPPESSDMSSKCDPEPSVPVKNTSSKGLPIRPVYLSNRERLLLRRQALKMTKRPVLA 873

Query: 164  IGKSNIMTGVAKAINTHFQKHPFAIVNVKGRAKGTSVQEVVSELEQATGAVLVS 3
            IGKSNI+TGVAKAI THFQKHP AIVN+KGRAKGTSVQEVV +LEQATGAVLVS
Sbjct: 874  IGKSNIVTGVAKAIKTHFQKHPLAIVNIKGRAKGTSVQEVVFKLEQATGAVLVS 927


>XP_003618343.2 group IIA intron splicing facilitator CRS1 [Medicago truncatula]
            AES74561.2 group IIA intron splicing facilitator CRS1
            [Medicago truncatula]
          Length = 1045

 Score = 1083 bits (2800), Expect = 0.0
 Identities = 599/972 (61%), Positives = 685/972 (70%), Gaps = 114/972 (11%)
 Frame = -3

Query: 2576 PTKFVIRCSGSETRTVPDSAIQRIADKLRSLGI---TDHQSPXXXXXXXXXAGEIFVPLP 2406
            P+KF IR S S + T+PDSAIQRIADKL SLGI   T   S          AGEIF+PLP
Sbjct: 28   PSKFTIRTSSSNSHTLPDSAIQRIADKLHSLGIITTTTGHSSSSSTTSTTTAGEIFLPLP 87

Query: 2405 HQLPKQRVGHTIDQSWSTPENPVP--GKGFAALSENEVEKQRRQNXXXXXXXXXXXXRVE 2232
            H LPK RVGHT+D SWSTPENPVP  G G   LSENEVE+ R                  
Sbjct: 88   HTLPKYRVGHTLDLSWSTPENPVPLVGAGLEKLSENEVERARLAKEKKREEKRK-----R 142

Query: 2231 APTVAELSLTEAEIMRLRKLGFGMKKKLKVGKAGITEGIVNGIHERWRSHEVVKIVCEDL 2052
             PT+AELSLT+ EI+RLR+LG+ MK+K+KVGKAG+TEGIVNGIHERWR  EVV++VCEDL
Sbjct: 143  VPTLAELSLTDGEILRLRELGYQMKQKIKVGKAGVTEGIVNGIHERWRRSEVVRVVCEDL 202

Query: 2051 CRTNMKRTHDLLERKTGGLVVWRSGSKIILYRGIDYKYPYFLSDKVLRDENNGDAMQHMD 1872
            CR NMKRTHD+LERKTGGLVVWRSGSKIILYRGIDYKYPYFLSD+VLR+E + DA+Q MD
Sbjct: 203  CRINMKRTHDILERKTGGLVVWRSGSKIILYRGIDYKYPYFLSDEVLREEES-DALQPMD 261

Query: 1871 GDDKNCNEKESHSSEMNSATHAGQNSNFKTAKPALIQGVGTPNKVRFQLPGEAELVEDAD 1692
             DD++ +E+++HSSEM+SATHAGQ+SN KT KPAL+QGVGTPN+VRFQLPGEAEL+E+ D
Sbjct: 262  SDDESIDERKTHSSEMSSATHAGQSSNIKTVKPALVQGVGTPNRVRFQLPGEAELLEEVD 321

Query: 1691 KLLEGLGPQFTDWWGYDPLPVDADLLPAVIPGFRKPFRLLPYGVKSKLTDDEMTTLRRLG 1512
             LLEGLGP+FTDWWGYDP+PVDADLLPAVIPGFR PFRLLPYGV+SKLTDDEMTTL+RLG
Sbjct: 322  SLLEGLGPRFTDWWGYDPVPVDADLLPAVIPGFRPPFRLLPYGVQSKLTDDEMTTLKRLG 381

Query: 1511 RPLPSHFALGRNMKLQGLAAAIIKLWERCEIVKIAVKRGVQNTDSETMAEEIKYLTGGTL 1332
            R LP HFALGRN KLQG+AAAIIK WERCEIV IAVKRGVQNT +  MAEEIKYLTGGTL
Sbjct: 382  RTLPCHFALGRNWKLQGVAAAIIKFWERCEIVNIAVKRGVQNTSNRKMAEEIKYLTGGTL 441

Query: 1331 LSRNNEFIVFYRGKDFLPAAVSSAIEQRRNIVTNKLKAENSSS----------------- 1203
            LSRN E IV YRGKDFLPAAVSSAI++R   V NK  AEN S+                 
Sbjct: 442  LSRNKEVIVIYRGKDFLPAAVSSAIKKRWKAVKNKENAENRSAITASSHSERKHMTFIKD 501

Query: 1202 DAVIKQRMFTKAEAALKRTSNKLSMXXXXXXXXXXXXXXXXXXXSPPEQEIVKEGITEEE 1023
               I++ +  KA+AA++RTS KL+                    S  E+EI KE ITEEE
Sbjct: 502  KETIEKPLLMKAKAAIQRTSFKLAQALEKKEKAEKLLESLEKDESLQEEEIDKESITEEE 561

Query: 1022 RYMLRKIGLKMSPFLLLGRRGVFDGTVENMHLHWKYRELVKIICKQGSLESVHQIARTLE 843
            RYMLR+IGLKM PFLLLGRRGVFDGTVENMHLHWKYRELVKIIC Q S+E  HQ ARTLE
Sbjct: 562  RYMLRRIGLKMKPFLLLGRRGVFDGTVENMHLHWKYRELVKIICNQESVEYAHQTARTLE 621

Query: 842  AESGGILVAVERVNKGYAIIVYRGKNYSRPSTLRPQTLLNKKQALKRSIEAQRCESLKLH 663
            AESGGILVAVERVNKGYAIIVYRGKNYSRP +LRP+TLLNKKQALKRSIEAQR E+LKLH
Sbjct: 622  AESGGILVAVERVNKGYAIIVYRGKNYSRPDSLRPRTLLNKKQALKRSIEAQRREALKLH 681

Query: 662  VLKLDKNINELKRQMVKDEANSKQIAEELRSDMATDR--HEACSDS-------------- 531
            VLKLDKNINELK QMVKDEA+S+QIA+ELRSD+AT+    EA  D+              
Sbjct: 682  VLKLDKNINELKHQMVKDEASSEQIAKELRSDLATENSPEEASVDNQQPIQEQHIELIGS 741

Query: 530  --------------------INCNSPKEASVDNQQAIQEQPVELIDSGGARQSEPESSAG 411
                                   NS +EASVDNQQ IQEQ +ELID+G   Q EPES  G
Sbjct: 742  GGECQGEPESLTGLVHQERQATKNSLEEASVDNQQPIQEQHIELIDTGEECQGEPESLTG 801

Query: 410  LIHKEKQLDEVNDSVVDTGHCVSNNKAMEXXXXXXXXXXXXSAPVIKGSSNELPSTSLY- 234
            L+H+E+QLDEV+D VVDTGH VS NKA E            SAPVI  +SNE PS+ ++ 
Sbjct: 802  LVHQERQLDEVDDFVVDTGHSVSTNKASEGSIISFKSDPEPSAPVINENSNEFPSSLVHP 861

Query: 233  ------------------------------------------------LSNRERLLLRKQ 198
                                                             S+R   L  ++
Sbjct: 862  KRQLDEVSDSVVDTGHSVSTNDAMEASIISFKRDPEPSAPVINKSPIEFSSRSSSLSNRE 921

Query: 197  AL-------KIKKRPVLAIGKSNIMTGVAKAINTHFQKHPFAIVNVKGRAKGTSVQEVVS 39
             L       ++KK P++ IGKSNI+ G+ +AI    ++HPF IVNVKGRAKGTSV E+VS
Sbjct: 922  RLLLRKQALRMKKIPIVPIGKSNIVAGLEEAIKNLLRRHPFVIVNVKGRAKGTSVHELVS 981

Query: 38   ELEQATGAVLVS 3
             LE+ATGAVLVS
Sbjct: 982  ILEEATGAVLVS 993


>XP_003554854.1 PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Glycine max] KRG93410.1 hypothetical
            protein GLYMA_19G014100 [Glycine max]
          Length = 1028

 Score = 1052 bits (2720), Expect = 0.0
 Identities = 591/926 (63%), Positives = 669/926 (72%), Gaps = 69/926 (7%)
 Frame = -3

Query: 2573 TKFVIRCSGSETRTVP---DSAIQRIADKLRSLGITDHQSPXXXXXXXXXAGEIFVPLPH 2403
            TKF IRCS  E +T      SAI++IA KLRSLGIT+  +            EI VP PH
Sbjct: 34   TKFHIRCSTPEIQTRTRRRSSAIEQIAKKLRSLGITEPPTSSS--------SEIHVPFPH 85

Query: 2402 QLPKQRVGHTIDQSWSTPENPVP--GKGFAALSENEVEKQRRQNXXXXXXXXXXXXRVEA 2229
            +LPK+RVGHT + SWSTP NPVP  G G AALS++EV +Q++                  
Sbjct: 86   ELPKRRVGHTFEPSWSTPLNPVPVPGSGIAALSKSEVRRQKKLRAEESRRRKEL-----V 140

Query: 2228 PTVAELSLTEAEIMRLRKLGFGM-KKKLKVGKAGITEGIVNGIHERWRSHEVVKIVCEDL 2052
            PT+AELSL ++EI RL  LGF   KKK+++ KAGITE IV+ IHERW+  EVV++ CE+L
Sbjct: 141  PTLAELSLPDSEIRRLTTLGFSTTKKKVRLAKAGITEQIVDVIHERWKRSEVVRVFCEEL 200

Query: 2051 CRTNMKRTHDLLERKTGGLVVWRSGSKIILYRGIDYKYPYFLSDKVLRDEN-NGDAMQHM 1875
             R +M+RTHDLLERKTGGLVVWRSG+KIILYRG DYKYPYFLSDKV R +N + DA+QH+
Sbjct: 201  SRDDMRRTHDLLERKTGGLVVWRSGTKIILYRGADYKYPYFLSDKVTRQDNTSNDALQHV 260

Query: 1874 DGDDKNCNEKESHSSEMNSATHAGQNSNFKTAKPALIQGVGTPNKVRFQLPGEAELVEDA 1695
            + DDK C++ ESH SE NS   A +NSN +TAKPALI GVGTPNKVRFQLP EAEL ED 
Sbjct: 261  NADDKYCDKSESHLSEKNSVACAVENSNAETAKPALILGVGTPNKVRFQLPDEAELAEDT 320

Query: 1694 DKLLEGLGPQFTDWWGYDPLPVDADLLPAVIPGFRKPFRLLPYGVKSKLTDDEMTTLRRL 1515
            D LL GLGP+FTDWWG DPLPVDADLLPAVI G+RKPFRLLPYGV  KLTDDEMTTL+RL
Sbjct: 321  DCLLTGLGPRFTDWWGGDPLPVDADLLPAVIHGYRKPFRLLPYGVNPKLTDDEMTTLKRL 380

Query: 1514 GRPLPSHFALGRNMKLQGLAAAIIKLWERCEIVKIAVKRGVQNTDSETMAEEIKYLTGGT 1335
            G+PLP HFALGRN KLQGLAAAIIKLWERCEIVKIAVKRGVQNT S+ MA+E+K+LTGG 
Sbjct: 381  GKPLPCHFALGRNRKLQGLAAAIIKLWERCEIVKIAVKRGVQNTSSKIMAKELKHLTGGI 440

Query: 1334 LLSRNNEFIVFYRGKDFLPAAVSSAIEQRRNIVTNKLKAENSSSDAVI------------ 1191
            LLSR+ EF VFYRGKD+LPAAVSSAI+++RNI   KLK  NS S  V             
Sbjct: 441  LLSRDREFFVFYRGKDYLPAAVSSAIKKQRNIGMYKLKFGNSLSATVTPNPKDGTIECNS 500

Query: 1190 -----------KQRMFTKAEAALKRTSNKLSMXXXXXXXXXXXXXXXXXXXSPPEQEIVK 1044
                       KQRM TKAE A+KRTS KLSM                   SP EQEI K
Sbjct: 501  EVKGMNFQKDTKQRMLTKAEEAIKRTSIKLSMALEKKAKAEKLLEKLINAESPQEQEIDK 560

Query: 1043 EGITEEERYMLRKIGLKMSPFLLLGRRGVFDGTVENMHLHWKYRELVKIICKQGSLESVH 864
            EGI++EE+YMLR+IGL M PFLLLGRRGVFDGTVENMHLHWKYRELVKIIC  GSLE VH
Sbjct: 561  EGISKEEKYMLRRIGLMMKPFLLLGRRGVFDGTVENMHLHWKYRELVKIICN-GSLEEVH 619

Query: 863  QIARTLEAESGGILVAVERVNKGYAIIVYRGKNYSRPSTLRPQTLLNKKQALKRSIEAQR 684
            QIA TLEAESGGILVAVERV KG+AIIVYRGKNYS P  LRPQTLLNK+QALKRSIEAQR
Sbjct: 620  QIALTLEAESGGILVAVERVRKGFAIIVYRGKNYSVPVCLRPQTLLNKRQALKRSIEAQR 679

Query: 683  CESLKLHVLKLDKNINELKRQMVKDE-ANSKQIAEELRSDMATDRHEACSDSINCNSPKE 507
             ESLKL +L LDK INELK Q+V+DE ANSKQ+AE  R DMATD HEACS+ IN +SPKE
Sbjct: 680  RESLKLRILTLDKEINELKLQIVEDEEANSKQMAEASRLDMATDEHEACSNFINWHSPKE 739

Query: 506  ASVDNQQAIQEQPVELIDSGGARQSEPESSAG---------------------------- 411
            AS DNQQAIQE+PVELIDSGGA Q EPE+S                              
Sbjct: 740  ASGDNQQAIQEEPVELIDSGGAHQGEPENSISWNSSIEASIDNQQAIQEHPVELIDGGAT 799

Query: 410  ----------LIHKEKQLDEVNDSVVDTGHCVSNNKAMEXXXXXXXXXXXXSAPVIKGSS 261
                      LIHKE Q DEV+DSV DT   +SN K ME             APVI  S 
Sbjct: 800  HQDEPESWPSLIHKETQSDEVSDSVTDTELHISNRKGMESSNSLSKNDREPLAPVIYMS- 858

Query: 260  NELPSTSLYLSNRERLLLRKQALKIKKRPVLAIGKSNIMTGVAKAINTHFQKHPFAIVNV 81
              LPS S++LS +ERLLLRKQALKIK+ PVLAIGKSNI++GV + I  HF+KHP A+VNV
Sbjct: 859  --LPSRSVHLSTKERLLLRKQALKIKQ-PVLAIGKSNIVSGVVQTIKAHFEKHPLAVVNV 915

Query: 80   KGRAKGTSVQEVVSELEQATGAVLVS 3
            KGRAKGTSVQE+V +LEQ TGA+LVS
Sbjct: 916  KGRAKGTSVQELVFKLEQETGALLVS 941


>KRG93411.1 hypothetical protein GLYMA_19G014100 [Glycine max]
          Length = 1034

 Score = 1045 bits (2703), Expect = 0.0
 Identities = 591/932 (63%), Positives = 669/932 (71%), Gaps = 75/932 (8%)
 Frame = -3

Query: 2573 TKFVIRCSGSETRTVP---DSAIQRIADKLRSLGITDHQSPXXXXXXXXXAGEIFVPLPH 2403
            TKF IRCS  E +T      SAI++IA KLRSLGIT+  +            EI VP PH
Sbjct: 34   TKFHIRCSTPEIQTRTRRRSSAIEQIAKKLRSLGITEPPTSSS--------SEIHVPFPH 85

Query: 2402 QLPKQRVGHTIDQSWSTPENPVP--GKGFAALSENEVEKQRRQNXXXXXXXXXXXXRVEA 2229
            +LPK+RVGHT + SWSTP NPVP  G G AALS++EV +Q++                  
Sbjct: 86   ELPKRRVGHTFEPSWSTPLNPVPVPGSGIAALSKSEVRRQKKLRAEESRRRKEL-----V 140

Query: 2228 PTVAELSLTEAEIMRLRKLGFGM-KKKLKVGKAGITEGIVNGIHERWRSHEVVKIVCEDL 2052
            PT+AELSL ++EI RL  LGF   KKK+++ KAGITE IV+ IHERW+  EVV++ CE+L
Sbjct: 141  PTLAELSLPDSEIRRLTTLGFSTTKKKVRLAKAGITEQIVDVIHERWKRSEVVRVFCEEL 200

Query: 2051 CRTNMKRTHDLLERKTGGLVVWRSGSKIILYRGIDYKYPYFLSDKVLRDEN-NGDAMQHM 1875
             R +M+RTHDLLERKTGGLVVWRSG+KIILYRG DYKYPYFLSDKV R +N + DA+QH+
Sbjct: 201  SRDDMRRTHDLLERKTGGLVVWRSGTKIILYRGADYKYPYFLSDKVTRQDNTSNDALQHV 260

Query: 1874 DGDDKNCNEKESHSSEMNSATHAGQNSNFKTAKPALIQGVGTPNKVRFQLPGEAELVEDA 1695
            + DDK C++ ESH SE NS   A +NSN +TAKPALI GVGTPNKVRFQLP EAEL ED 
Sbjct: 261  NADDKYCDKSESHLSEKNSVACAVENSNAETAKPALILGVGTPNKVRFQLPDEAELAEDT 320

Query: 1694 DKLLEGLGPQFTDWWGYDPLPVDADLLPAVIPGFRKPFRLLPYGVKSKLTDDEMTTLRRL 1515
            D LL GLGP+FTDWWG DPLPVDADLLPAVI G+RKPFRLLPYGV  KLTDDEMTTL+RL
Sbjct: 321  DCLLTGLGPRFTDWWGGDPLPVDADLLPAVIHGYRKPFRLLPYGVNPKLTDDEMTTLKRL 380

Query: 1514 GRPLPSHFALGRNMKLQGLAAAIIKLWERCEIVKIAVKRGVQNTDSETMAEEIKYLTGGT 1335
            G+PLP HFALGRN KLQGLAAAIIKLWERCEIVKIAVKRGVQNT S+ MA+E+K+LTGG 
Sbjct: 381  GKPLPCHFALGRNRKLQGLAAAIIKLWERCEIVKIAVKRGVQNTSSKIMAKELKHLTGGI 440

Query: 1334 LLSRNNEFIVFYRGKDFLPAAVSSAIEQRRNIVTNKLKAENSSSDAV------------- 1194
            LLSR+ EF VFYRGKD+LPAAVSSAI+++RNI   KLK  NS S  V             
Sbjct: 441  LLSRDREFFVFYRGKDYLPAAVSSAIKKQRNIGMYKLKFGNSLSATVTPNPKDGTIECNS 500

Query: 1193 ----------IKQRMFTKAEAALKRTSNKLSMXXXXXXXXXXXXXXXXXXXSPPEQEIVK 1044
                       KQRM TKAE A+KRTS KLSM                   SP EQEI K
Sbjct: 501  EVKGMNFQKDTKQRMLTKAEEAIKRTSIKLSMALEKKAKAEKLLEKLINAESPQEQEIDK 560

Query: 1043 EGITEEERYMLRKIGLKMSPFLLLGRRGVFDGTVENMHLHWKYRELVKIICKQGSLESVH 864
            EGI++EE+YMLR+IGL M PFLLLGRRGVFDGTVENMHLHWKYRELVKIIC  GSLE VH
Sbjct: 561  EGISKEEKYMLRRIGLMMKPFLLLGRRGVFDGTVENMHLHWKYRELVKIIC-NGSLEEVH 619

Query: 863  QIARTLEAESGGILVAVERVNKGYAIIVYRGKNYSRPSTLRPQTLLNKKQALKRSIEAQR 684
            QIA TLEAESGGILVAVERV KG+AIIVYRGKNYS P  LRPQTLLNK+QALKRSIEAQR
Sbjct: 620  QIALTLEAESGGILVAVERVRKGFAIIVYRGKNYSVPVCLRPQTLLNKRQALKRSIEAQR 679

Query: 683  CESLKLHVLKLDKNINELKRQMVKD-EANSKQIAEELRSDM------ATDRHEACSDSIN 525
             ESLKL +L LDK INELK Q+V+D EANSKQ+AE  R DM      ATD HEACS+ IN
Sbjct: 680  RESLKLRILTLDKEINELKLQIVEDEEANSKQMAEASRLDMFVAWFKATDEHEACSNFIN 739

Query: 524  CNSPKEASVDNQQAIQEQPVELIDSGGARQSEPESS------------------------ 417
             +SPKEAS DNQQAIQE+PVELIDSGGA Q EPE+S                        
Sbjct: 740  WHSPKEASGDNQQAIQEEPVELIDSGGAHQGEPENSISWNSSIEASIDNQQAIQEHPVEL 799

Query: 416  --------------AGLIHKEKQLDEVNDSVVDTGHCVSNNKAMEXXXXXXXXXXXXSAP 279
                            LIHKE Q DEV+DSV DT   +SN K ME             AP
Sbjct: 800  IDGGATHQDEPESWPSLIHKETQSDEVSDSVTDTELHISNRKGMESSNSLSKNDREPLAP 859

Query: 278  VIKGSSNELPSTSLYLSNRERLLLRKQALKIKKRPVLAIGKSNIMTGVAKAINTHFQKHP 99
            VI  S   LPS S++LS +ERLLLRKQALKI K+PVLAIGKSNI++GV + I  HF+KHP
Sbjct: 860  VIYMS---LPSRSVHLSTKERLLLRKQALKI-KQPVLAIGKSNIVSGVVQTIKAHFEKHP 915

Query: 98   FAIVNVKGRAKGTSVQEVVSELEQATGAVLVS 3
             A+VNVKGRAKGTSVQE+V +LEQ TGA+LVS
Sbjct: 916  LAVVNVKGRAKGTSVQELVFKLEQETGALLVS 947


>XP_007151135.1 hypothetical protein PHAVU_004G020800g [Phaseolus vulgaris]
            XP_007151136.1 hypothetical protein PHAVU_004G020800g
            [Phaseolus vulgaris] ESW23129.1 hypothetical protein
            PHAVU_004G020800g [Phaseolus vulgaris] ESW23130.1
            hypothetical protein PHAVU_004G020800g [Phaseolus
            vulgaris]
          Length = 960

 Score = 1043 bits (2697), Expect = 0.0
 Identities = 572/910 (62%), Positives = 654/910 (71%), Gaps = 54/910 (5%)
 Frame = -3

Query: 2570 KFVIRCSGSETRTVPDSAIQRIADKLRSLGITDHQSPXXXXXXXXXAGEIFVPLPHQLPK 2391
            KF+IRCS +E  T+PDSAIQRIA+KLRSLGI D  S           GEIFVPLP  LPK
Sbjct: 36   KFLIRCSDTEAETLPDSAIQRIAEKLRSLGIDDRSSAPVPAPASGA-GEIFVPLPQHLPK 94

Query: 2390 QRVGHTIDQSWSTPENPVPGKGFAALSENEVEKQRRQNXXXXXXXXXXXXRVEAPTVAEL 2211
            + VGHTIDQSW   E  VP                                    T+AEL
Sbjct: 95   RHVGHTIDQSWDKREERVP------------------------------------TLAEL 118

Query: 2210 SLTEAEIMRLRKLGFGMKKKLKVGKAGITEGIVNGIHERWRSHEVVKIVCEDLCRTNMKR 2031
            SL+ AEI RL  +G  +++KL+VGKAGITEGIVNGIHERWR+ EVV+I C+DL R NMKR
Sbjct: 119  SLSNAEIKRLTTVGLRLRQKLRVGKAGITEGIVNGIHERWRNSEVVRIACDDLSRFNMKR 178

Query: 2030 THDLLERKTGGLVVWRSGSKIILYRGIDYKYPYFLSDKVLRDENNGDAMQHMDGDDKNCN 1851
            THDLLERKTGGLVVWRSGSKIILYRG DYKYPYFLSDKVLRD+++GD +QHMD DDK+ +
Sbjct: 179  THDLLERKTGGLVVWRSGSKIILYRGPDYKYPYFLSDKVLRDDHSGDVLQHMDEDDKSRD 238

Query: 1850 EKESHSSEMNSATHAGQNSNFKTAKPALIQGVGTPNKVRFQLPGEAELVEDADKLLEGLG 1671
            ++ESH SE NS T+ GQ+ N KT+KPALIQG+GTP KVRFQLPGEAEL +DAD LL G+G
Sbjct: 239  KRESHLSEKNSVTYTGQSLNAKTSKPALIQGIGTPKKVRFQLPGEAELAKDADNLLTGIG 298

Query: 1670 PQFTDWWGYDPLPVDADLLPAVIPGFRKPFRLLPYGVKSKLTDDEMTTLRRLGRPLPSHF 1491
            P+F DWWGYDPLPVDADLLPAVIPG+RKPFRLLPYGVK KLTDDEMTT+RRLG  LP HF
Sbjct: 299  PRFFDWWGYDPLPVDADLLPAVIPGYRKPFRLLPYGVKPKLTDDEMTTMRRLGNHLPCHF 358

Query: 1490 ALGRNMKLQGLAAAIIKLWERCEIVKIAVKRGVQNTDSETMAEEIKYLTGGTLLSRNNEF 1311
            ALGRN KLQGLA AIIKLWERCEIVKIA+KRGV+NTD E MAEEIKYLTGGTLL+R+ EF
Sbjct: 359  ALGRNRKLQGLAVAIIKLWERCEIVKIAIKRGVENTDGEVMAEEIKYLTGGTLLARDKEF 418

Query: 1310 IVFYRGKDFLPAAVSSAIEQRRNIVTNKLKAENSSS--------------DAVIKQRMF- 1176
            IVFYRGKDFLPAAVSSAIEQRR+I  NKLK  NS S              D+V+K   F 
Sbjct: 419  IVFYRGKDFLPAAVSSAIEQRRSIGMNKLKTGNSRSVTDARDLNDGTRECDSVVKGMNFQ 478

Query: 1175 --------TKAEAALKRTSNKLSMXXXXXXXXXXXXXXXXXXXSPPEQEIVKEGITEEER 1020
                    T+AE A+K TS KLSM                    P E+EI +EGITEEE+
Sbjct: 479  KDTKPGILTEAEKAIKSTSIKLSMALEERTKAEKLLAEMENAEKPQEEEINREGITEEEK 538

Query: 1019 YMLRKIGLKMSPFLLLGRRGVFDGTVENMHLHWKYRELVKIICKQG--SLESVHQIARTL 846
            YMLR+IGLKM PFLLLGRRGVFDGTV+NMHLHWKYRELVKIIC +   SLE V QIA+TL
Sbjct: 539  YMLRRIGLKMGPFLLLGRRGVFDGTVQNMHLHWKYRELVKIICNKQTLSLEDVQQIAKTL 598

Query: 845  EAESGGILVAVERVNKGYAIIVYRGKNYSRPSTLRPQTLLNKKQALKRSIEAQRCESLKL 666
            EAESGGIL++VE+V KG+AIIVYRGKNYSRP++LRP+TLLNK++ALKRS EAQR ESLKL
Sbjct: 599  EAESGGILISVEKVGKGHAIIVYRGKNYSRPASLRPRTLLNKREALKRSKEAQRHESLKL 658

Query: 665  HVLKLDKNINELKRQMVK-----DEANSKQ------IAEELRSDMATDRHEACS------ 537
            HVLKL  NIN LK QM +     D+  + Q      I      + + D  EA        
Sbjct: 659  HVLKLGSNINRLKLQMEQSVELVDDGGAHQSEADNFINWNPNKETSVDNPEAMQGQTVEP 718

Query: 536  ------------DSINCNSPKEASVDNQQAIQEQPVELIDSGGARQSEPESSAGLIHKEK 393
                         S N NSP+ A VDNQQAIQ+ PVE ID  GA Q EPES  GLI K++
Sbjct: 719  IDSGEAHPGEPESSANWNSPEGAFVDNQQAIQDHPVEQIDGRGAHQDEPESWPGLIPKDR 778

Query: 392  QLDEVNDSVVDTGHCVSNNKAMEXXXXXXXXXXXXSAPVIKGSSNELPSTSLYLSNRERL 213
            + D V+DS+VDT H VS ++ ME            S  V   SSNELPS S+ LSNRERL
Sbjct: 779  EFDGVSDSLVDTEHSVSISEVMESSIMSSKSHADLSTLVRDMSSNELPSGSVCLSNRERL 838

Query: 212  LLRKQALKIKKRPVLAIGKSNIMTGVAKAINTHFQKHPFAIVNVKGRAKGTSVQEVVSEL 33
            LLRKQAL +KKR VL++GKSN +TG+AKAIN HF+K+P A+VNVKGRA GTS+QEVVS+L
Sbjct: 839  LLRKQALTMKKRSVLSVGKSNSVTGIAKAINAHFRKYPLAVVNVKGRANGTSIQEVVSKL 898

Query: 32   EQATGAVLVS 3
            EQ TGAVLVS
Sbjct: 899  EQETGAVLVS 908


>KHN16352.1 Chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic [Glycine soja]
          Length = 1024

 Score =  950 bits (2456), Expect = 0.0
 Identities = 514/753 (68%), Positives = 572/753 (75%), Gaps = 35/753 (4%)
 Frame = -3

Query: 2570 KFVIRCSGSETRTVPDSAIQRIADKLRSLGITDHQSPXXXXXXXXXAGEIFVPLPHQLPK 2391
            KF+IRCS  +T T+PDSAIQRIADKLRSLGI D  S          AGEIFVPLP QLP 
Sbjct: 41   KFLIRCS--DTETLPDSAIQRIADKLRSLGIADQPSTATPGPSDSDAGEIFVPLPQQLPT 98

Query: 2390 QRVGHTIDQSWSTPENPVPGKGFAALSENEVEKQRRQNXXXXXXXXXXXXRVEAPTVAEL 2211
            +RVGHTID +W+                   +++RR++              + PT+AEL
Sbjct: 99   RRVGHTIDPTWA-------------------KRERRED--------------KVPTLAEL 125

Query: 2210 SLTEAEIMRLRKLGFGMKKKLKVGKAGITEGIVNGIHERWRSHEVVKIVCEDLCRTNMKR 2031
            SL++AEI RL   G  M++KL+VGKAG+TEGIVNGIHERWRS EVV+IVCEDL R NMKR
Sbjct: 126  SLSDAEIRRLTTAGLAMRQKLRVGKAGLTEGIVNGIHERWRSFEVVRIVCEDLSRFNMKR 185

Query: 2030 THDLLERKTGGLVVWRSGSKIILYRGIDYKYPYFLSDKVLRDENNGDAMQHMDGDDKNCN 1851
            THDLLERKTGGLVVWRSGSKIILYRG DYKYPYFLSDKV RD+N GDAMQHMD D KN +
Sbjct: 186  THDLLERKTGGLVVWRSGSKIILYRGTDYKYPYFLSDKVSRDDNTGDAMQHMDEDAKNFD 245

Query: 1850 EKESHSSEMNSATHAGQNSNFKTAKPALIQGVGTPNKVRFQLPGEAELVEDADKLLEGLG 1671
            ++ESHSSE NS T+AG++SN KTAKPALIQGVG+PNKVRFQLPGEAEL +DAD LL G+G
Sbjct: 246  KRESHSSEKNSVTYAGKSSNVKTAKPALIQGVGSPNKVRFQLPGEAELAKDADSLLTGIG 305

Query: 1670 PQFTDWWGYDPLPVDADLLPAVIPGFRKPFRLLPYGVKSKLTDDEMTTLRRLGRPLPSHF 1491
            P+F DWWGYDPLPVDADLLPAVIPG+RKPFRLLPYGVK KLTDDEMTT+RRLG+ LP HF
Sbjct: 306  PRFIDWWGYDPLPVDADLLPAVIPGYRKPFRLLPYGVKPKLTDDEMTTMRRLGKHLPCHF 365

Query: 1490 ALGRNMKLQGLAAAIIKLWERCEIVKIAVKRGVQNTDSETMAEEIKYLTGGTLLSRNNEF 1311
            ALGRN KL GLAAAIIKLWERCEIVKIA+KRGV NT+ E MAEEIKYLTGGTL++R+ EF
Sbjct: 366  ALGRNKKLHGLAAAIIKLWERCEIVKIAIKRGVLNTNGELMAEEIKYLTGGTLIARDKEF 425

Query: 1310 IVFYRGKDFLPAAVSSAIEQRRNIVTNKLKAENSSS--------DAVI------------ 1191
            IVFYRGKDFLP AVSSAIEQRR+I   KLK  NS S        D  I            
Sbjct: 426  IVFYRGKDFLPTAVSSAIEQRRSIGMYKLKTRNSLSVTDDPDLKDGTIECDSEVKGMNFK 485

Query: 1190 ---KQRMFTKAEAALKRTSNKLSMXXXXXXXXXXXXXXXXXXXSPPEQEIVKEGITEEER 1020
               KQ M T+AEAA+K TS KLSM                   SP E+EI KEGITEEE+
Sbjct: 486  KDTKQGMLTEAEAAIKSTSIKLSMALEEKAKAEKLLSELENAESPQEEEINKEGITEEEK 545

Query: 1019 YMLRKIGLKMSPFLLLGRRGVFDGTVENMHLHWKYRELVKIIC-KQGSLESVHQIARTLE 843
            YMLR+IGLKMSPFLLLGRRGVFDGTVENMHLHWKYRELVKIIC KQ SLE V QIA+TLE
Sbjct: 546  YMLRRIGLKMSPFLLLGRRGVFDGTVENMHLHWKYRELVKIICNKQMSLEDVQQIAQTLE 605

Query: 842  AESGGILVAVERVNKGYAIIVYRGKNYSRPSTLRPQTLLNKKQALKRSIEAQRCESLKLH 663
            AESGGIL+AVERVNK YAIIVYRGKNYSRP++LRP+TLLNKKQALKRSIEAQRCESLKLH
Sbjct: 606  AESGGILIAVERVNKSYAIIVYRGKNYSRPASLRPRTLLNKKQALKRSIEAQRCESLKLH 665

Query: 662  VLKLDKNINELKRQMVKD-EANSKQIAEELRS----------DMATDRHEACSDSINCNS 516
            VLKLD+NINELK QM KD EANSKQ + + +           D          +SIN N 
Sbjct: 666  VLKLDRNINELKHQMAKDMEANSKQTSVDNQQAIQEQPVELIDSGGAHQAEPGNSINWNY 725

Query: 515  PKEASVDNQQAIQEQPVELIDSGGARQSEPESS 417
            PKEASVD QQ +QEQ VEL D GGA QSEP++S
Sbjct: 726  PKEASVDYQQTMQEQSVELFDGGGAVQSEPQNS 758



 Score =  240 bits (612), Expect = 2e-62
 Identities = 138/216 (63%), Positives = 158/216 (73%), Gaps = 4/216 (1%)
 Frame = -3

Query: 638  NELKRQMVKDEANSKQIAEELRSDMATDRHEAC----SDSINCNSPKEASVDNQQAIQEQ 471
            N +     K+ +   Q A + +S    DR EA      +SI+ NSP+EASVDNQQAIQ Q
Sbjct: 757  NSINWNSPKEASVDNQQAIQGQSFELIDRSEAHHGEPENSIDWNSPEEASVDNQQAIQGQ 816

Query: 470  PVELIDSGGARQSEPESSAGLIHKEKQLDEVNDSVVDTGHCVSNNKAMEXXXXXXXXXXX 291
            PVELID GGA Q EPES +GLI KE +LD  +DSVVDT HCVS +K ME           
Sbjct: 817  PVELIDGGGAHQDEPESWSGLIPKETKLDRDSDSVVDTQHCVSISKVMESSIVASESDPD 876

Query: 290  XSAPVIKGSSNELPSTSLYLSNRERLLLRKQALKIKKRPVLAIGKSNIMTGVAKAINTHF 111
             SA V   SSNELPS S+YLSNRERLLLRKQALK+KKRPVL++GKSNI+TG+AKAI  HF
Sbjct: 877  LSALVRDMSSNELPSRSVYLSNRERLLLRKQALKMKKRPVLSVGKSNIVTGLAKAIKAHF 936

Query: 110  QKHPFAIVNVKGRAKGTSVQEVVSELEQATGAVLVS 3
            QKHP AIVNVKGRAKGTS+QEVVS+LEQ TGAVLVS
Sbjct: 937  QKHPLAIVNVKGRAKGTSIQEVVSKLEQETGAVLVS 972


>XP_003554853.1 PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Glycine max] KRG93409.1 hypothetical
            protein GLYMA_19G014000 [Glycine max]
          Length = 1027

 Score =  950 bits (2456), Expect = 0.0
 Identities = 514/753 (68%), Positives = 572/753 (75%), Gaps = 35/753 (4%)
 Frame = -3

Query: 2570 KFVIRCSGSETRTVPDSAIQRIADKLRSLGITDHQSPXXXXXXXXXAGEIFVPLPHQLPK 2391
            KF+IRCS  +T T+PDSAIQRIADKLRSLGI D  S          AGEIFVPLP QLP 
Sbjct: 44   KFLIRCS--DTETLPDSAIQRIADKLRSLGIADQPSTATPGPSDSDAGEIFVPLPQQLPT 101

Query: 2390 QRVGHTIDQSWSTPENPVPGKGFAALSENEVEKQRRQNXXXXXXXXXXXXRVEAPTVAEL 2211
            +RVGHTID +W+                   +++RR++              + PT+AEL
Sbjct: 102  RRVGHTIDPTWA-------------------KRERRED--------------KVPTLAEL 128

Query: 2210 SLTEAEIMRLRKLGFGMKKKLKVGKAGITEGIVNGIHERWRSHEVVKIVCEDLCRTNMKR 2031
            SL++AEI RL   G  M++KL+VGKAG+TEGIVNGIHERWRS EVV+IVCEDL R NMKR
Sbjct: 129  SLSDAEIRRLTTAGLAMRQKLRVGKAGLTEGIVNGIHERWRSFEVVRIVCEDLSRFNMKR 188

Query: 2030 THDLLERKTGGLVVWRSGSKIILYRGIDYKYPYFLSDKVLRDENNGDAMQHMDGDDKNCN 1851
            THDLLERKTGGLVVWRSGSKIILYRG DYKYPYFLSDKV RD+N GDAMQHMD D KN +
Sbjct: 189  THDLLERKTGGLVVWRSGSKIILYRGTDYKYPYFLSDKVSRDDNTGDAMQHMDEDAKNFD 248

Query: 1850 EKESHSSEMNSATHAGQNSNFKTAKPALIQGVGTPNKVRFQLPGEAELVEDADKLLEGLG 1671
            ++ESHSSE NS T+AG++SN KTAKPALIQGVG+PNKVRFQLPGEAEL +DAD LL G+G
Sbjct: 249  KRESHSSEKNSVTYAGKSSNVKTAKPALIQGVGSPNKVRFQLPGEAELAKDADSLLTGIG 308

Query: 1670 PQFTDWWGYDPLPVDADLLPAVIPGFRKPFRLLPYGVKSKLTDDEMTTLRRLGRPLPSHF 1491
            P+F DWWGYDPLPVDADLLPAVIPG+RKPFRLLPYGVK KLTDDEMTT+RRLG+ LP HF
Sbjct: 309  PRFIDWWGYDPLPVDADLLPAVIPGYRKPFRLLPYGVKPKLTDDEMTTMRRLGKHLPCHF 368

Query: 1490 ALGRNMKLQGLAAAIIKLWERCEIVKIAVKRGVQNTDSETMAEEIKYLTGGTLLSRNNEF 1311
            ALGRN KL GLAAAIIKLWERCEIVKIA+KRGV NT+ E MAEEIKYLTGGTL++R+ EF
Sbjct: 369  ALGRNKKLHGLAAAIIKLWERCEIVKIAIKRGVLNTNGELMAEEIKYLTGGTLIARDKEF 428

Query: 1310 IVFYRGKDFLPAAVSSAIEQRRNIVTNKLKAENSSS--------DAVI------------ 1191
            IVFYRGKDFLP AVSSAIEQRR+I   KLK  NS S        D  I            
Sbjct: 429  IVFYRGKDFLPTAVSSAIEQRRSIGMYKLKTRNSLSVTDDPDLKDGTIECDSEVKGMNFK 488

Query: 1190 ---KQRMFTKAEAALKRTSNKLSMXXXXXXXXXXXXXXXXXXXSPPEQEIVKEGITEEER 1020
               KQ M T+AEAA+K TS KLSM                   SP E+EI KEGITEEE+
Sbjct: 489  KDTKQGMLTEAEAAIKSTSIKLSMALEEKAKAEKLLSELENAESPQEEEINKEGITEEEK 548

Query: 1019 YMLRKIGLKMSPFLLLGRRGVFDGTVENMHLHWKYRELVKIIC-KQGSLESVHQIARTLE 843
            YMLR+IGLKMSPFLLLGRRGVFDGTVENMHLHWKYRELVKIIC KQ SLE V QIA+TLE
Sbjct: 549  YMLRRIGLKMSPFLLLGRRGVFDGTVENMHLHWKYRELVKIICNKQMSLEDVQQIAQTLE 608

Query: 842  AESGGILVAVERVNKGYAIIVYRGKNYSRPSTLRPQTLLNKKQALKRSIEAQRCESLKLH 663
            AESGGIL+AVERVNK YAIIVYRGKNYSRP++LRP+TLLNKKQALKRSIEAQRCESLKLH
Sbjct: 609  AESGGILIAVERVNKSYAIIVYRGKNYSRPASLRPRTLLNKKQALKRSIEAQRCESLKLH 668

Query: 662  VLKLDKNINELKRQMVKD-EANSKQIAEELRS----------DMATDRHEACSDSINCNS 516
            VLKLD+NINELK QM KD EANSKQ + + +           D          +SIN N 
Sbjct: 669  VLKLDRNINELKHQMAKDMEANSKQTSVDNQQAIQEQPVELIDSGGAHQAEPGNSINWNY 728

Query: 515  PKEASVDNQQAIQEQPVELIDSGGARQSEPESS 417
            PKEASVD QQ +QEQ VEL D GGA QSEP++S
Sbjct: 729  PKEASVDYQQTMQEQSVELFDGGGAVQSEPQNS 761



 Score =  240 bits (612), Expect = 2e-62
 Identities = 138/216 (63%), Positives = 158/216 (73%), Gaps = 4/216 (1%)
 Frame = -3

Query: 638  NELKRQMVKDEANSKQIAEELRSDMATDRHEAC----SDSINCNSPKEASVDNQQAIQEQ 471
            N +     K+ +   Q A + +S    DR EA      +SI+ NSP+EASVDNQQAIQ Q
Sbjct: 760  NSINWNSPKEASVDNQQAIQGQSFELIDRSEAHHGEPENSIDWNSPEEASVDNQQAIQGQ 819

Query: 470  PVELIDSGGARQSEPESSAGLIHKEKQLDEVNDSVVDTGHCVSNNKAMEXXXXXXXXXXX 291
            PVELID GGA Q EPES +GLI KE +LD  +DSVVDT HCVS +K ME           
Sbjct: 820  PVELIDGGGAHQDEPESWSGLIPKETKLDRDSDSVVDTQHCVSISKVMESSIVASESDPD 879

Query: 290  XSAPVIKGSSNELPSTSLYLSNRERLLLRKQALKIKKRPVLAIGKSNIMTGVAKAINTHF 111
             SA V   SSNELPS S+YLSNRERLLLRKQALK+KKRPVL++GKSNI+TG+AKAI  HF
Sbjct: 880  LSALVRDMSSNELPSRSVYLSNRERLLLRKQALKMKKRPVLSVGKSNIVTGLAKAIKAHF 939

Query: 110  QKHPFAIVNVKGRAKGTSVQEVVSELEQATGAVLVS 3
            QKHP AIVNVKGRAKGTS+QEVVS+LEQ TGAVLVS
Sbjct: 940  QKHPLAIVNVKGRAKGTSIQEVVSKLEQETGAVLVS 975


>KJB33714.1 hypothetical protein B456_006G027700 [Gossypium raimondii]
          Length = 998

 Score =  939 bits (2428), Expect = 0.0
 Identities = 516/913 (56%), Positives = 634/913 (69%), Gaps = 52/913 (5%)
 Frame = -3

Query: 2585 TLDPTKFVIRCSGSETR----TVPDSAIQRIADKLRSLGITDHQSPXXXXXXXXXA-GEI 2421
            TL P K++     S TR     +P SAIQRIADKLRSLG ++  +P           GEI
Sbjct: 32   TLKPRKYIFLIRSSITRPENQALPQSAIQRIADKLRSLGFSETPNPQPESESGSGCPGEI 91

Query: 2420 FVPLPHQLPKQRVGHTIDQSWSTPENPVPGKGF----AALSENEVEKQRRQNXXXXXXXX 2253
            FVPLP +LPK RVGHTID SWSTPENPVP  G       +   +++++R++         
Sbjct: 92   FVPLPEKLPKYRVGHTIDSSWSTPENPVPDPGSDPGSLMVRFRDMKRERKKMGRVKEEER 151

Query: 2252 XXXXRVEAPTVAELSLTEAEIMRLRKLGFGMKKKLKVGKAGITEGIVNGIHERWRSHEVV 2073
                    P++AEL L+ AE+ RLR +G G K+KLKVGKAGITEGIVNGIHERWR  EVV
Sbjct: 152  V------VPSLAELKLSAAELKRLRTVGIGEKRKLKVGKAGITEGIVNGIHERWRKSEVV 205

Query: 2072 KIVCEDLCRTNMKRTHDLLERKTGGLVVWRSGSKIILYRGIDYKYPYFLSDKVLRDENNG 1893
            +IVCED+C+ NMKRTH++LERKTGGLV+WRSGSKIILYRG +YKYPYF +DK+   +++ 
Sbjct: 206  RIVCEDICKMNMKRTHEVLERKTGGLVIWRSGSKIILYRGANYKYPYFSADKIGTHDSSS 265

Query: 1892 DAMQHMDGDDKNCNEKESHSSEMNSATHAGQNSNFKTAKPALIQGVGTPNKVRFQLPGEA 1713
            +A    + D+K  +E ES SSE N    +   +  K  K ALIQGVG+P++VRFQLPGEA
Sbjct: 266  NASSDTNVDNKELDETESCSSEFNGVKTSTPKATDKMTKRALIQGVGSPSRVRFQLPGEA 325

Query: 1712 ELVEDADKLLEGLGPQFTDWWGYDPLPVDADLLPAVIPGFRKPFRLLPYGVKSKLTDDEM 1533
            ELV +AD+LL+GLGP+FTDWWGY+PLPVD DLLPA+IPG+R+PFRLLPYGVKS LT+DEM
Sbjct: 326  ELVAEADRLLDGLGPRFTDWWGYEPLPVDGDLLPAIIPGYRRPFRLLPYGVKSLLTNDEM 385

Query: 1532 TTLRRLGRPLPSHFALGRNMKLQGLAAAIIKLWERCEIVKIAVKRGVQNTDSETMAEEIK 1353
            TTLRRLGRPLP HFALGRN KLQGLAA+IIKLWE+CEI KIAVKRGVQNT+SE MAEE+K
Sbjct: 386  TTLRRLGRPLPCHFALGRNRKLQGLAASIIKLWEKCEIAKIAVKRGVQNTNSELMAEELK 445

Query: 1352 YLTGGTLLSRNNEFIVFYRGKDFLPAAVSSAIEQRRNIVTN-----------------KL 1224
            +LTGGTLLSR+ +FIV YRGKDFLP+AVSSAIE+RR  V +                 K+
Sbjct: 446  WLTGGTLLSRDKDFIVLYRGKDFLPSAVSSAIEERRKHVIHAENQSGKTMQEVHGEGAKI 505

Query: 1223 KAENS-------SSDAVIKQRMFTKAEAALKRTSNKLSMXXXXXXXXXXXXXXXXXXXSP 1065
             +EN         SD    ++    AEA +KRTS+KLSM                    P
Sbjct: 506  ASENDINSAKDRKSDVFSIRKNLNSAEATIKRTSSKLSMALEKKAKAEKLLAELEQEVIP 565

Query: 1064 PEQEIVKEGITEEERYMLRKIGLKMSPFLLLGRRGVFDGTVENMHLHWKYRELVKIICKQ 885
             + EI KEGIT EERYMLRK+GL+M PFLLLGRRGVFDGTVENMHLHWKYRELVKII K+
Sbjct: 566  QQSEIDKEGITREERYMLRKVGLRMKPFLLLGRRGVFDGTVENMHLHWKYRELVKIISKE 625

Query: 884  GSLESVHQIARTLEAESGGILVAVERVNKGYAIIVYRGKNYSRPSTLRPQTLLNKKQALK 705
             ++E+VHQ A+ LEAESGGILVAVERV+KGYAII YRGKNY RP+ LRPQTLL K++A+K
Sbjct: 626  TNVEAVHQEAQILEAESGGILVAVERVSKGYAIIFYRGKNYERPTCLRPQTLLTKREAMK 685

Query: 704  RSIEAQRCESLKLHVLKLDKNINELKRQMV-----KDEANSKQIAEELRSDM----ATDR 552
            RS+E QR +SLKLH+LKL +NI+ELK Q+V     K+E  + Q  +  RSD+    + + 
Sbjct: 686  RSLEEQRRKSLKLHILKLTRNIDELKHQLVVDKEAKEEMETLQSVKCARSDIEYHASPEG 745

Query: 551  HEACSDSINCNSPKEASVDNQQAIQE-------QPVELIDSGGARQSEPESSAGLIHKEK 393
            H    D     S K   +    +I E       +P  + D     ++EPE S+  +++ K
Sbjct: 746  HLEAKDKSESTSMKNDRMVAAVSISEPSEQVLVEPSSIHDGVENHKTEPEFSSESVNRRK 805

Query: 392  QLDEVN--DSVVDTGHCVSNNKAME-XXXXXXXXXXXXSAPVIKGSSNELPSTSLYLSNR 222
               E+    S  +      NN  ME              +P     SN++ ST+ +LSN+
Sbjct: 806  HNTELRALHSQFEMEENAYNNGPMESMVESASKNLDVLISPAADNVSNKMASTAKFLSNK 865

Query: 221  ERLLLRKQALKIKKRPVLAIGKSNIMTGVAKAINTHFQKHPFAIVNVKGRAKGTSVQEVV 42
            ERLLLRKQAL +KKRPVLA+G+SNI+TGVAK INTHF+KHP AIVNVKGRAKGTSVQEVV
Sbjct: 866  ERLLLRKQALNMKKRPVLAVGRSNIVTGVAKTINTHFKKHPLAIVNVKGRAKGTSVQEVV 925

Query: 41   SELEQATGAVLVS 3
             +L++ATGAVLVS
Sbjct: 926  LKLQEATGAVLVS 938


>XP_018823102.1 PREDICTED: CRM-domain containing factor CFM2, chloroplastic isoform
            X1 [Juglans regia]
          Length = 1052

 Score =  936 bits (2420), Expect = 0.0
 Identities = 526/942 (55%), Positives = 635/942 (67%), Gaps = 87/942 (9%)
 Frame = -3

Query: 2567 FVIR--CSGSETRTVPDSAIQRIADKLRSLGITDHQSPXXXXXXXXXA-----GEIFVPL 2409
            F+IR   S S+T+T+P SAIQRIADKLRSLGIT+                   GEIF+PL
Sbjct: 49   FLIRTSASASDTQTIPKSAIQRIADKLRSLGITEETPSSNPGLNARPDSETSAGEIFIPL 108

Query: 2408 PHQLPKQRVGHTIDQSWSTPENPVP--GKGFAALSENEVEKQRRQNXXXXXXXXXXXXRV 2235
            P+++PK+RVG+TID+SWSTPENPVP  G G A    +EV ++  +               
Sbjct: 109  PNRVPKRRVGYTIDRSWSTPENPVPEPGTGSAIARYHEVRREVFKQKALERKDKKEKREE 168

Query: 2234 EAPTVAELSLTEAEIMRLRKLGFGMKKKLKVGKAGITEGIVNGIHERWRSHEVVKIVCED 2055
             APT+AEL+L E E+ RLRK+G   +KKLK+GKAGITEGIVNGIHERWR  EVVKIVCED
Sbjct: 169  RAPTLAELTLNENELRRLRKIGIETRKKLKIGKAGITEGIVNGIHERWRHFEVVKIVCED 228

Query: 2054 LCRTNMKRTHDLLERKTGGLVVWRSGSKIILYRGIDYKYPYFLSDKVLRDENNGDAMQHM 1875
            LCR NMKRTHDLLER TGGLVVWRSGSKI+LYRG +YKYPYFLSD++L++E + DA+   
Sbjct: 229  LCRKNMKRTHDLLERTTGGLVVWRSGSKIVLYRGANYKYPYFLSDEILKNETSTDALPDP 288

Query: 1874 DGDDKNCNEKESHSSEMNSATHAGQNSNFKTAKPALIQGVGTPNKVRFQLPGEAELVEDA 1695
            + DD   ++ ES    ++    +  +   K ++P LIQGVG PN+VRFQLPGEA+L E A
Sbjct: 289  NMDDGGSDKMESCLPSIDGVESSITSPTKKISQPKLIQGVGRPNRVRFQLPGEAQLAEVA 348

Query: 1694 DKLLEGLGPQFTDWWGYDPLPVDADLLPAVIPGFRKPFRLLPYGVKSKLTDDEMTTLRRL 1515
            D+LLEGLGP+FTDWWGYDPLPVDADLLPAV+PG+R+PFRLLPYGVK  LT+DEMTTL+RL
Sbjct: 349  DRLLEGLGPRFTDWWGYDPLPVDADLLPAVVPGYRRPFRLLPYGVKPILTNDEMTTLKRL 408

Query: 1514 GRPLPSHFALGRNMKLQGLAAAIIKLWERCEIVKIAVKRGVQNTDSETMAEEIKYLTGGT 1335
            GRP+  HFA+GRN  LQGLAA+I+KLWE+CEI KIAVKRGVQNT+SE MA E+K LTGG 
Sbjct: 409  GRPMACHFAVGRNRNLQGLAASIVKLWEKCEIAKIAVKRGVQNTNSEMMAAELKRLTGGV 468

Query: 1334 LLSRNNEFIVFYRGKDFLPAAVSSAIEQRRNIVTNKLKAENSSSDAVI------------ 1191
            LLSR++EF V YRGKDFLP +V SAIE+RR  V +  K   + S +V             
Sbjct: 469  LLSRDSEFFVLYRGKDFLPLSVCSAIEERRKHVIHGEKERANCSTSVTTAQELKLGNAEG 528

Query: 1190 ------------------KQRMFTKAEAALKRTSNKLSMXXXXXXXXXXXXXXXXXXXSP 1065
                              +QRM    EA +KRTS KLSM                    P
Sbjct: 529  GSESELDGANYEERGGISEQRMLRSTEAVIKRTSIKLSMALEKKAKAEKLLAELEEAEIP 588

Query: 1064 PEQEIVKEGITEEERYMLRKIGLKMSPFLLLGRRGVFDGTVENMHLHWKYRELVKIICKQ 885
               EI KEGITEEER MLRK+GL+M PFLL+GRRG+FDGTVENMHLHWKYRELVK+I K+
Sbjct: 589  QAPEIDKEGITEEERNMLRKVGLRMKPFLLMGRRGIFDGTVENMHLHWKYRELVKVISKE 648

Query: 884  GSLESVHQIARTLEAESGGILVAVERVNKGYAIIVYRGKNYSRPSTLRPQTLLNKKQALK 705
             S+E+VHQ ARTLE+ESGGILVAVERVNKGYAIIVYRGKNY RP++LRPQTLLNK++A+K
Sbjct: 649  KSIEAVHQEARTLESESGGILVAVERVNKGYAIIVYRGKNYKRPASLRPQTLLNKREAMK 708

Query: 704  RSIEAQRCESLKLHVLKLDKNINELKRQMVKDEANSKQIAEELRSDM------------- 564
            RS+EAQR +SLKLHVLKL++NI++LK Q+VK++ NS Q  E  RS               
Sbjct: 709  RSLEAQRRKSLKLHVLKLNRNIDDLKLQLVKEDMNSVQPTECSRSHAEVKYGHLSRPLIS 768

Query: 563  --------ATDRHEACSDSINCNSPKEASVDN--QQAIQEQPVELI-----DSGGARQSE 429
                    A D+H A S S+N N   +A ++N  Q   Q++ + L      D  G  + E
Sbjct: 769  ACHEENAEAKDKHGAHSASMNFNEGVDAPINNILQSTQQDEVIGLSAMYEGDPAGRVEIE 828

Query: 428  PESSAGL-IHKEKQLDE-------VNDSVVD------------TGHCVSNNKAMEXXXXX 309
               S G   H    +D+       V+ S  D               C  NNKA E     
Sbjct: 829  SSESVGKETHANVFMDKNGEVGAAVSTSFPDNFMSEGKRHSAVVEDCAFNNKAKELSDKS 888

Query: 308  XXXXXXXSAPVIKGSSNELPSTSLYLSNRERLLLRKQALKIKKRPVLAIGKSNIMTGVAK 129
                       I+  S ++P  +L LSN+ERLLLRKQALK+KKRPVLA+G+SNI+TGVAK
Sbjct: 889  VKTDSKPDQITIENGS-KMPRRALQLSNKERLLLRKQALKMKKRPVLAVGRSNIVTGVAK 947

Query: 128  AINTHFQKHPFAIVNVKGRAKGTSVQEVVSELEQATGAVLVS 3
             I  HF+KHP AIVNVKGRAKGTSVQEVV  LEQATGAVLVS
Sbjct: 948  TIMAHFKKHPLAIVNVKGRAKGTSVQEVVFLLEQATGAVLVS 989


>XP_012483760.1 PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic isoform X2 [Gossypium raimondii] KJB33715.1
            hypothetical protein B456_006G027700 [Gossypium
            raimondii]
          Length = 1012

 Score =  935 bits (2417), Expect = 0.0
 Identities = 518/927 (55%), Positives = 636/927 (68%), Gaps = 66/927 (7%)
 Frame = -3

Query: 2585 TLDPTKFVIRCSGSETR----TVPDSAIQRIADKLRSLGITDHQSPXXXXXXXXXA-GEI 2421
            TL P K++     S TR     +P SAIQRIADKLRSLG ++  +P           GEI
Sbjct: 32   TLKPRKYIFLIRSSITRPENQALPQSAIQRIADKLRSLGFSETPNPQPESESGSGCPGEI 91

Query: 2420 FVPLPHQLPKQRVGHTIDQSWSTPENPVPGKGF----AALSENEVEKQRRQNXXXXXXXX 2253
            FVPLP +LPK RVGHTID SWSTPENPVP  G       +   +++++R++         
Sbjct: 92   FVPLPEKLPKYRVGHTIDSSWSTPENPVPDPGSDPGSLMVRFRDMKRERKKMGRVKEEER 151

Query: 2252 XXXXRVEAPTVAELSLTEAEIMRLRKLGFGMKKKLKVGKAGITEGIVNGIHERWRSHEVV 2073
                    P++AEL L+ AE+ RLR +G G K+KLKVGKAGITEGIVNGIHERWR  EVV
Sbjct: 152  V------VPSLAELKLSAAELKRLRTVGIGEKRKLKVGKAGITEGIVNGIHERWRKSEVV 205

Query: 2072 KIVCEDLCRTNMKRTHDLLERKTGGLVVWRSGSKIILYRGIDYKYPYFLSDKVLRDENNG 1893
            +IVCED+C+ NMKRTH++LERKTGGLV+WRSGSKIILYRG +YKYPYF +DK+   +++ 
Sbjct: 206  RIVCEDICKMNMKRTHEVLERKTGGLVIWRSGSKIILYRGANYKYPYFSADKIGTHDSSS 265

Query: 1892 DAMQHMDGDDKNCNEKESHSSEMNSATHAGQNSNFKTAKPALIQGVGTPNKVRFQLPGEA 1713
            +A    + D+K  +E ES SSE N    +   +  K  K ALIQGVG+P++VRFQLPGEA
Sbjct: 266  NASSDTNVDNKELDETESCSSEFNGVKTSTPKATDKMTKRALIQGVGSPSRVRFQLPGEA 325

Query: 1712 ELVEDADKLLEGLGPQFTDWWGYDPLPVDADLLPAVIPGFRKPFRLLPYGVKSKLTDDEM 1533
            ELV +AD+LL+GLGP+FTDWWGY+PLPVD DLLPA+IPG+R+PFRLLPYGVKS LT+DEM
Sbjct: 326  ELVAEADRLLDGLGPRFTDWWGYEPLPVDGDLLPAIIPGYRRPFRLLPYGVKSLLTNDEM 385

Query: 1532 TTLRRLGRPLPSHFALGRNMKLQGLAAAIIKLWERCEIVKIAVKRGVQNTDSETMAEEIK 1353
            TTLRRLGRPLP HFALGRN KLQGLAA+IIKLWE+CEI KIAVKRGVQNT+SE MAEE+K
Sbjct: 386  TTLRRLGRPLPCHFALGRNRKLQGLAASIIKLWEKCEIAKIAVKRGVQNTNSELMAEELK 445

Query: 1352 YLTGGTLLSRNNEFIVFYRGKDFLPAAVSSAIEQRRNIVTN-----------------KL 1224
            +LTGGTLLSR+ +FIV YRGKDFLP+AVSSAIE+RR  V +                 K+
Sbjct: 446  WLTGGTLLSRDKDFIVLYRGKDFLPSAVSSAIEERRKHVIHAENQSGKTMQEVHGEGAKI 505

Query: 1223 KAENS-------SSDAVIKQRMFTKAEAALKRTSNKLSMXXXXXXXXXXXXXXXXXXXSP 1065
             +EN         SD    ++    AEA +KRTS+KLSM                    P
Sbjct: 506  ASENDINSAKDRKSDVFSIRKNLNSAEATIKRTSSKLSMALEKKAKAEKLLAELEQEVIP 565

Query: 1064 PEQEIVKEGITEEERYMLRKIGLKMSPFLLLGRRGVFDGTVENMHLHWKYRELVKIICKQ 885
             + EI KEGIT EERYMLRK+GL+M PFLLLGRRGVFDGTVENMHLHWKYRELVKII K+
Sbjct: 566  QQSEIDKEGITREERYMLRKVGLRMKPFLLLGRRGVFDGTVENMHLHWKYRELVKIISKE 625

Query: 884  GSLESVHQIARTLEAESGGILVAVERVNKGYAIIVYRGKNYSRPSTLRPQTLLNKKQALK 705
             ++E+VHQ A+ LEAESGGILVAVERV+KGYAII YRGKNY RP+ LRPQTLL K++A+K
Sbjct: 626  TNVEAVHQEAQILEAESGGILVAVERVSKGYAIIFYRGKNYERPTCLRPQTLLTKREAMK 685

Query: 704  RSIEAQRCESLKLHVLKLDKNINELKRQMVKDEANSKQIA----------EEL------- 576
            RS+E QR +SLKLH+LKL +NI+ELK Q+V D+  S  +A          EE+       
Sbjct: 686  RSLEEQRRKSLKLHILKLTRNIDELKHQLVVDKEASNTLAADQSRLPSVEEEMETLQSVK 745

Query: 575  --RSDM----ATDRHEACSDSINCNSPKEASVDNQQAIQE-------QPVELIDSGGARQ 435
              RSD+    + + H    D     S K   +    +I E       +P  + D     +
Sbjct: 746  CARSDIEYHASPEGHLEAKDKSESTSMKNDRMVAAVSISEPSEQVLVEPSSIHDGVENHK 805

Query: 434  SEPESSAGLIHKEKQLDEVN--DSVVDTGHCVSNNKAME-XXXXXXXXXXXXSAPVIKGS 264
            +EPE S+  +++ K   E+    S  +      NN  ME              +P     
Sbjct: 806  TEPEFSSESVNRRKHNTELRALHSQFEMEENAYNNGPMESMVESASKNLDVLISPAADNV 865

Query: 263  SNELPSTSLYLSNRERLLLRKQALKIKKRPVLAIGKSNIMTGVAKAINTHFQKHPFAIVN 84
            SN++ ST+ +LSN+ERLLLRKQAL +KKRPVLA+G+SNI+TGVAK INTHF+KHP AIVN
Sbjct: 866  SNKMASTAKFLSNKERLLLRKQALNMKKRPVLAVGRSNIVTGVAKTINTHFKKHPLAIVN 925

Query: 83   VKGRAKGTSVQEVVSELEQATGAVLVS 3
            VKGRAKGTSVQEVV +L++ATGAVLVS
Sbjct: 926  VKGRAKGTSVQEVVLKLQEATGAVLVS 952


>XP_016672839.1 PREDICTED: CRM-domain containing factor CFM2, chloroplastic-like
            isoform X3 [Gossypium hirsutum] XP_016672840.1 PREDICTED:
            CRM-domain containing factor CFM2, chloroplastic-like
            isoform X4 [Gossypium hirsutum]
          Length = 1012

 Score =  935 bits (2416), Expect = 0.0
 Identities = 518/927 (55%), Positives = 636/927 (68%), Gaps = 66/927 (7%)
 Frame = -3

Query: 2585 TLDPTKFVIRCSGSETR----TVPDSAIQRIADKLRSLGITDHQSPXXXXXXXXXA-GEI 2421
            TL P K++     S TR     +P SAIQRIADKLRSLG ++  +P           GEI
Sbjct: 32   TLKPRKYIFLIRSSITRPENQALPQSAIQRIADKLRSLGFSETPNPQPESESGSGCPGEI 91

Query: 2420 FVPLPHQLPKQRVGHTIDQSWSTPENPVPGKGF----AALSENEVEKQRRQNXXXXXXXX 2253
            FVPLP +LPK RVGHTID SWSTPENPVP  G       +   +++++R++         
Sbjct: 92   FVPLPEKLPKYRVGHTIDTSWSTPENPVPDPGSDPGSLMVRFRDMKRERKKMGRVKEEER 151

Query: 2252 XXXXRVEAPTVAELSLTEAEIMRLRKLGFGMKKKLKVGKAGITEGIVNGIHERWRSHEVV 2073
                    P++AEL L+ AE+ RLR +G G K+KLKVGKAGITEGIVNGIHERWR  EVV
Sbjct: 152  V------VPSLAELKLSAAELKRLRTVGIGEKRKLKVGKAGITEGIVNGIHERWRKSEVV 205

Query: 2072 KIVCEDLCRTNMKRTHDLLERKTGGLVVWRSGSKIILYRGIDYKYPYFLSDKVLRDENNG 1893
            +IVCED+C+ NMKRTH++LERKTGGLV+WRSGSKIILYRG +YKYPYF +DK+   +++ 
Sbjct: 206  RIVCEDICKMNMKRTHEVLERKTGGLVIWRSGSKIILYRGANYKYPYFSADKIGTHDSSS 265

Query: 1892 DAMQHMDGDDKNCNEKESHSSEMNSATHAGQNSNFKTAKPALIQGVGTPNKVRFQLPGEA 1713
            +A    + D+K  +E ES SSE N    +   +  K  K ALI GVG+P++VRFQLPGEA
Sbjct: 266  NASSDTNVDNKELDETESCSSEFNGVKTSTPKATDKMTKRALIHGVGSPSRVRFQLPGEA 325

Query: 1712 ELVEDADKLLEGLGPQFTDWWGYDPLPVDADLLPAVIPGFRKPFRLLPYGVKSKLTDDEM 1533
            ELV +AD+LL+GLGP+FTDWWGY+PLPVD DLLPA+IPG+R+PFRLLPYGVKS LT+DEM
Sbjct: 326  ELVAEADRLLDGLGPRFTDWWGYEPLPVDGDLLPAIIPGYRRPFRLLPYGVKSLLTNDEM 385

Query: 1532 TTLRRLGRPLPSHFALGRNMKLQGLAAAIIKLWERCEIVKIAVKRGVQNTDSETMAEEIK 1353
            TTLRRLGRPLP HFALGRN KLQGLAA+IIKLWE+CEI KIAVKRGVQNT+SE MAEE+K
Sbjct: 386  TTLRRLGRPLPCHFALGRNRKLQGLAASIIKLWEKCEIAKIAVKRGVQNTNSELMAEELK 445

Query: 1352 YLTGGTLLSRNNEFIVFYRGKDFLPAAVSSAIEQRRNIVTN-----------------KL 1224
            +LTGGTLLSR+ +FIV YRGKDFLP+AVSSAIE+RR  V +                 K+
Sbjct: 446  WLTGGTLLSRDKDFIVLYRGKDFLPSAVSSAIEERRKHVIHAENQSGKTMQEVHGEGAKI 505

Query: 1223 KAEN-------SSSDAVIKQRMFTKAEAALKRTSNKLSMXXXXXXXXXXXXXXXXXXXSP 1065
             +EN       S SD    ++    AEA +KRTS+KLSM                    P
Sbjct: 506  ASENDINSAKDSKSDVFSVRKNLNSAEATIKRTSSKLSMALEKKAKAEKLLAELEQEVIP 565

Query: 1064 PEQEIVKEGITEEERYMLRKIGLKMSPFLLLGRRGVFDGTVENMHLHWKYRELVKIICKQ 885
             + EI KEGIT EERYMLRK+GL+M PFLLLGRRGVFDGTVENMHLHWKYRELVKII K+
Sbjct: 566  QQSEIDKEGITREERYMLRKVGLRMKPFLLLGRRGVFDGTVENMHLHWKYRELVKIISKE 625

Query: 884  GSLESVHQIARTLEAESGGILVAVERVNKGYAIIVYRGKNYSRPSTLRPQTLLNKKQALK 705
             ++E+VHQ A+ LEAESGGILVAVERV+KGYAII YRGKNY RP+ LRPQTLL K++A+K
Sbjct: 626  TNVEAVHQEAQILEAESGGILVAVERVSKGYAIIFYRGKNYERPTCLRPQTLLTKREAMK 685

Query: 704  RSIEAQRCESLKLHVLKLDKNINELKRQMVKDEANSKQIA----------EEL------- 576
            RS+E QR +SLKLH+LKL +NI+ELK Q+V D+  S  +A          EE+       
Sbjct: 686  RSLEEQRRKSLKLHILKLTRNIDELKHQLVVDKEASNTLAADQSRLPSVEEEMETLQSVK 745

Query: 575  --RSDM----ATDRHEACSDSINCNSPKEASVDNQQAIQE-------QPVELIDSGGARQ 435
              RSD+    + + H    D     S K   +    +I E       +P  + D     +
Sbjct: 746  CARSDIEYHASPEGHLEAKDKSESTSMKNDRMVAAVSISEPSEQVLVEPSSIHDGVENHK 805

Query: 434  SEPESSAGLIHKEKQLDEVN--DSVVDTGHCVSNNKAME-XXXXXXXXXXXXSAPVIKGS 264
            +EPE S+  +++ K   E+    S  +      NN  ME              +P     
Sbjct: 806  TEPEFSSESVNRRKHNTELRALHSQFEMEENAYNNGPMESMVESASKNLDVLISPAADNV 865

Query: 263  SNELPSTSLYLSNRERLLLRKQALKIKKRPVLAIGKSNIMTGVAKAINTHFQKHPFAIVN 84
            SN++ ST+ +LSN+ERLLLRKQAL +KKRPVLA+G+SNI+TGVAK INTHF+KHP AIVN
Sbjct: 866  SNKMASTAKFLSNKERLLLRKQALNMKKRPVLAVGRSNIVTGVAKTINTHFKKHPLAIVN 925

Query: 83   VKGRAKGTSVQEVVSELEQATGAVLVS 3
            VKGRAKGTSVQEVV +L++ATGAVLVS
Sbjct: 926  VKGRAKGTSVQEVVLKLQEATGAVLVS 952


>XP_012483761.1 PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic isoform X3 [Gossypium raimondii]
          Length = 1009

 Score =  935 bits (2416), Expect = 0.0
 Identities = 517/924 (55%), Positives = 635/924 (68%), Gaps = 63/924 (6%)
 Frame = -3

Query: 2585 TLDPTKFVIRCSGSETR----TVPDSAIQRIADKLRSLGITDHQSPXXXXXXXXXA-GEI 2421
            TL P K++     S TR     +P SAIQRIADKLRSLG ++  +P           GEI
Sbjct: 32   TLKPRKYIFLIRSSITRPENQALPQSAIQRIADKLRSLGFSETPNPQPESESGSGCPGEI 91

Query: 2420 FVPLPHQLPKQRVGHTIDQSWSTPENPVPGKGF----AALSENEVEKQRRQNXXXXXXXX 2253
            FVPLP +LPK RVGHTID SWSTPENPVP  G       +   +++++R++         
Sbjct: 92   FVPLPEKLPKYRVGHTIDSSWSTPENPVPDPGSDPGSLMVRFRDMKRERKKMGRVKEEER 151

Query: 2252 XXXXRVEAPTVAELSLTEAEIMRLRKLGFGMKKKLKVGKAGITEGIVNGIHERWRSHEVV 2073
                    P++AEL L+ AE+ RLR +G G K+KLKVGKAGITEGIVNGIHERWR  EVV
Sbjct: 152  V------VPSLAELKLSAAELKRLRTVGIGEKRKLKVGKAGITEGIVNGIHERWRKSEVV 205

Query: 2072 KIVCEDLCRTNMKRTHDLLERKTGGLVVWRSGSKIILYRGIDYKYPYFLSDKVLRDENNG 1893
            +IVCED+C+ NMKRTH++LERKTGGLV+WRSGSKIILYRG +YKYPYF +DK+   +++ 
Sbjct: 206  RIVCEDICKMNMKRTHEVLERKTGGLVIWRSGSKIILYRGANYKYPYFSADKIGTHDSSS 265

Query: 1892 DAMQHMDGDDKNCNEKESHSSEMNSATHAGQNSNFKTAKPALIQGVGTPNKVRFQLPGEA 1713
            +A    + D+K  +E ES SSE N    +   +  K  K ALIQGVG+P++VRFQLPGEA
Sbjct: 266  NASSDTNVDNKELDETESCSSEFNGVKTSTPKATDKMTKRALIQGVGSPSRVRFQLPGEA 325

Query: 1712 ELVEDADKLLEGLGPQFTDWWGYDPLPVDADLLPAVIPGFRKPFRLLPYGVKSKLTDDEM 1533
            ELV +AD+LL+GLGP+FTDWWGY+PLPVD DLLPA+IPG+R+PFRLLPYGVKS LT+DEM
Sbjct: 326  ELVAEADRLLDGLGPRFTDWWGYEPLPVDGDLLPAIIPGYRRPFRLLPYGVKSLLTNDEM 385

Query: 1532 TTLRRLGRPLPSHFALGRNMKLQGLAAAIIKLWERCEIVKIAVKRGVQNTDSETMAEEIK 1353
            TTLRRLGRPLP HFALGRN KLQGLAA+IIKLWE+CEI KIAVKRGVQNT+SE MAEE+K
Sbjct: 386  TTLRRLGRPLPCHFALGRNRKLQGLAASIIKLWEKCEIAKIAVKRGVQNTNSELMAEELK 445

Query: 1352 YLTGGTLLSRNNEFIVFYRGKDFLPAAVSSAIEQRRNIVTN-----------------KL 1224
            +LTGGTLLSR+ +FIV YRGKDFLP+AVSSAIE+RR  V +                 K+
Sbjct: 446  WLTGGTLLSRDKDFIVLYRGKDFLPSAVSSAIEERRKHVIHAENQSGKTMQEVHGEGAKI 505

Query: 1223 KAENS-------SSDAVIKQRMFTKAEAALKRTSNKLSMXXXXXXXXXXXXXXXXXXXSP 1065
             +EN         SD    ++    AEA +KRTS+KLSM                    P
Sbjct: 506  ASENDINSAKDRKSDVFSIRKNLNSAEATIKRTSSKLSMALEKKAKAEKLLAELEQEVIP 565

Query: 1064 PEQEIVKEGITEEERYMLRKIGLKMSPFLLLGRRGVFDGTVENMHLHWKYRELVKIICKQ 885
             + EI KEGIT EERYMLRK+GL+M PFLLLGRRGVFDGTVENMHLHWKYRELVKII K+
Sbjct: 566  QQSEIDKEGITREERYMLRKVGLRMKPFLLLGRRGVFDGTVENMHLHWKYRELVKIISKE 625

Query: 884  GSLESVHQIARTLEAESGGILVAVERVNKGYAIIVYRGKNYSRPSTLRPQTLLNKKQALK 705
             ++E+VHQ A+ LEAESGGILVAVERV+KGYAII YRGKNY RP+ LRPQTLL K++A+K
Sbjct: 626  TNVEAVHQEAQILEAESGGILVAVERVSKGYAIIFYRGKNYERPTCLRPQTLLTKREAMK 685

Query: 704  RSIEAQRCESLKLHVLKLDKNINELKRQMVKD-----EANSKQIAEELRSDM----ATDR 552
            RS+E QR +SLKLH+LKL +NI+ELK Q+V D     E  + Q  +  RSD+    + + 
Sbjct: 686  RSLEEQRRKSLKLHILKLTRNIDELKHQLVVDKEVEEEMETLQSVKCARSDIEYHASPEG 745

Query: 551  HEACSDSINCNSPKEASVDNQQAIQE-------QPVELIDSGGARQSEPESSAGLIHKEK 393
            H    D     S K   +    +I E       +P  + D     ++EPE S+  +++ K
Sbjct: 746  HLEAKDKSESTSMKNDRMVAAVSISEPSEQVLVEPSSIHDGVENHKTEPEFSSESVNRRK 805

Query: 392  QLDEVN------DSVVDTGH-------CVSNNKAME-XXXXXXXXXXXXSAPVIKGSSNE 255
               E+       + V  + H          NN  ME              +P     SN+
Sbjct: 806  HNTELRALHSQFEMVESSSHHDNLMEENAYNNGPMESMVESASKNLDVLISPAADNVSNK 865

Query: 254  LPSTSLYLSNRERLLLRKQALKIKKRPVLAIGKSNIMTGVAKAINTHFQKHPFAIVNVKG 75
            + ST+ +LSN+ERLLLRKQAL +KKRPVLA+G+SNI+TGVAK INTHF+KHP AIVNVKG
Sbjct: 866  MASTAKFLSNKERLLLRKQALNMKKRPVLAVGRSNIVTGVAKTINTHFKKHPLAIVNVKG 925

Query: 74   RAKGTSVQEVVSELEQATGAVLVS 3
            RAKGTSVQEVV +L++ATGAVLVS
Sbjct: 926  RAKGTSVQEVVLKLQEATGAVLVS 949


>CBI34982.3 unnamed protein product, partial [Vitis vinifera]
          Length = 1028

 Score =  935 bits (2416), Expect = 0.0
 Identities = 523/927 (56%), Positives = 639/927 (68%), Gaps = 65/927 (7%)
 Frame = -3

Query: 2588 KTLDP--TKFVIRCSGSETRTVPDSAIQRIADKLRSLGITDHQSPXXXXXXXXXA----G 2427
            KTL+P  +KF++R S  + +T+P +AIQRIA+KLRSLG  D             A    G
Sbjct: 56   KTLNPKPSKFILRASNPDAQTLPKTAIQRIAEKLRSLGYVDGDESRKVLSSDKPANGSAG 115

Query: 2426 EIFVPLPHQLPKQRVGHTIDQSWSTPENPVP--GKGFAALSENEVEKQRRQNXXXXXXXX 2253
            EIFVPLP+QLPK RVGHTIDQSWS PENPVP  G G      +E+ K+ ++         
Sbjct: 116  EIFVPLPNQLPKHRVGHTIDQSWSLPENPVPEPGTGGVITRFHELRKEVKREKKLVRKED 175

Query: 2252 XXXXRVEAPTVAELSLTEAEIMRLRKLGFGMKKKLKVGKAGITEGIVNGIHERWRSHEVV 2073
                   APT+AEL+L E E+ RL+ +G  ++KKLKVGKAGITEGIVNGIHERWR  EVV
Sbjct: 176  E-----RAPTLAELTLPEEELRRLKGIGIQIRKKLKVGKAGITEGIVNGIHERWRRAEVV 230

Query: 2072 KIVCEDLCRTNMKRTHDLLERKTGGLVVWRSGSKIILYRGIDYKYPYFLSDKVLRDENNG 1893
            KI CED+C+ NMKRTHD+LERKTGGLV+WRSGS IILYRG +YKYPYFLSD  L ++++ 
Sbjct: 231  KIRCEDICKLNMKRTHDILERKTGGLVIWRSGSYIILYRGANYKYPYFLSDNNLPNDSSH 290

Query: 1892 DAMQHMDGDDKNCNEKESHSSEMNSATHAGQNSNFKTAKPALIQGVGTPNKVRFQLPGEA 1713
            DA      +++  + KE  SS       AG     K A  +LIQGVG P +VRFQLPGEA
Sbjct: 291  DASSDSQMNNEEHDGKEVCSSGKGDVKSAGPMPANKIAPLSLIQGVGYPTRVRFQLPGEA 350

Query: 1712 ELVEDADKLLEGLGPQFTDWWGYDPLPVDADLLPAVIPGFRKPFRLLPYGVKSKLTDDEM 1533
            +L E+AD+LL+GLGP+FTDWWGYDPLP+DADLLPAV+PG+R+PFRLLPYG+K KLT+DEM
Sbjct: 351  QLEEEADRLLDGLGPRFTDWWGYDPLPIDADLLPAVVPGYRRPFRLLPYGLKPKLTNDEM 410

Query: 1532 TTLRRLGRPLPSHFALGRNMKLQGLAAAIIKLWERCEIVKIAVKRGVQNTDSETMAEEIK 1353
            T LRRLGRPLP HFALGRN KLQGLAA++IKLWE+CEI KIAVKRGVQNT+SE MAEE+K
Sbjct: 411  TVLRRLGRPLPCHFALGRNRKLQGLAASMIKLWEKCEIAKIAVKRGVQNTNSEMMAEELK 470

Query: 1352 YLTGGTLLSRNNEFIVFYRGKDFLPAAVSSAIEQRR------------------NIVTNK 1227
             LTGGTLLSR+ EFIVFYRGKDFLP AVSSAIE RR                  N   ++
Sbjct: 471  NLTGGTLLSRDREFIVFYRGKDFLPPAVSSAIEARRKYGIHRGKQKIDHHRLAINAEESE 530

Query: 1226 LKAENSSSD------------AVIKQRMFTKAEAALKRTSNKLSMXXXXXXXXXXXXXXX 1083
            L     +SD            ++ K+RM   AEA ++RT+ KLSM               
Sbjct: 531  LGTSEHASDKDCDGTDDQKTNSLSKRRMLRSAEAVVERTNIKLSMALEKKERAEKLLAEL 590

Query: 1082 XXXXSPPEQEIVKEGITEEERYMLRKIGLKMSPFLLLGRRGVFDGTVENMHLHWKYRELV 903
                 P + EI KEGITEEERYMLRK+GL+M PFLLLGRRG+FDGTVENMHLHWKYRELV
Sbjct: 591  EEAQIPQQPEIDKEGITEEERYMLRKVGLRMKPFLLLGRRGIFDGTVENMHLHWKYRELV 650

Query: 902  KIICKQGSLESVHQIARTLEAESGGILVAVERVNKGYAIIVYRGKNYSRPSTLRPQTLLN 723
            KII    S+E +H +ARTLEAESGGILVAVERV+KGYAII+YRGKNY RP++LRPQTLLN
Sbjct: 651  KIISNGRSIEDIHGVARTLEAESGGILVAVERVSKGYAIIMYRGKNYKRPASLRPQTLLN 710

Query: 722  KKQALKRSIEAQRCESLKLHVLKLDKNINELKRQMV---KD-EANSKQIAEELRSDMATD 555
            K++ALKRS+EAQR ESLKLHVL+L +NI+ELK Q+V   KD E NSKQ+ ++ R  +A +
Sbjct: 711  KREALKRSLEAQRRESLKLHVLRLTRNIDELKHQLVSRIKDKETNSKQLVDKSRLHLARE 770

Query: 554  RHEACSDSINCNSPKEASVDNQQAIQEQP----VELIDSGGARQSEPESSAGLIHKEKQL 387
            R+ A    I+ +   ++S D+ Q            + DS    ++ PE S+  + KE + 
Sbjct: 771  RYGADVILIHSSDGMDSSRDSLQTSHNDKRIDFPSMCDS-DTDEANPEPSSESVLKEIET 829

Query: 386  DEVNDSVVDTGHC------------------VSNNKAMEXXXXXXXXXXXXSAP-VIKGS 264
            + + D + + G C                  V++ + ME                 +   
Sbjct: 830  NVLTD-MNEEGECTTCSEDLVSQGETSCYAIVNHEETMESSVKSSKNEFKPPVQRPVDTR 888

Query: 263  SNELPSTSLYLSNRERLLLRKQALKIKKRPVLAIGKSNIMTGVAKAINTHFQKHPFAIVN 84
            SNE+P  +  LSNRERLLLRKQAL++KKRPV+A+G+SNI+TGVAK I  HFQKHP AIVN
Sbjct: 889  SNEMPFRAAPLSNRERLLLRKQALRMKKRPVIAVGRSNIVTGVAKTIKAHFQKHPLAIVN 948

Query: 83   VKGRAKGTSVQEVVSELEQATGAVLVS 3
            VKGRAKGTSVQEV+ +LEQATGAVLVS
Sbjct: 949  VKGRAKGTSVQEVIFKLEQATGAVLVS 975


>XP_002275511.1 PREDICTED: CRM-domain containing factor CFM2, chloroplastic isoform
            X1 [Vitis vinifera] XP_010660972.1 PREDICTED: CRM-domain
            containing factor CFM2, chloroplastic isoform X1 [Vitis
            vinifera]
          Length = 1044

 Score =  935 bits (2416), Expect = 0.0
 Identities = 523/927 (56%), Positives = 639/927 (68%), Gaps = 65/927 (7%)
 Frame = -3

Query: 2588 KTLDP--TKFVIRCSGSETRTVPDSAIQRIADKLRSLGITDHQSPXXXXXXXXXA----G 2427
            KTL+P  +KF++R S  + +T+P +AIQRIA+KLRSLG  D             A    G
Sbjct: 56   KTLNPKPSKFILRASNPDAQTLPKTAIQRIAEKLRSLGYVDGDESRKVLSSDKPANGSAG 115

Query: 2426 EIFVPLPHQLPKQRVGHTIDQSWSTPENPVP--GKGFAALSENEVEKQRRQNXXXXXXXX 2253
            EIFVPLP+QLPK RVGHTIDQSWS PENPVP  G G      +E+ K+ ++         
Sbjct: 116  EIFVPLPNQLPKHRVGHTIDQSWSLPENPVPEPGTGGVITRFHELRKEVKREKKLVRKED 175

Query: 2252 XXXXRVEAPTVAELSLTEAEIMRLRKLGFGMKKKLKVGKAGITEGIVNGIHERWRSHEVV 2073
                   APT+AEL+L E E+ RL+ +G  ++KKLKVGKAGITEGIVNGIHERWR  EVV
Sbjct: 176  E-----RAPTLAELTLPEEELRRLKGIGIQIRKKLKVGKAGITEGIVNGIHERWRRAEVV 230

Query: 2072 KIVCEDLCRTNMKRTHDLLERKTGGLVVWRSGSKIILYRGIDYKYPYFLSDKVLRDENNG 1893
            KI CED+C+ NMKRTHD+LERKTGGLV+WRSGS IILYRG +YKYPYFLSD  L ++++ 
Sbjct: 231  KIRCEDICKLNMKRTHDILERKTGGLVIWRSGSYIILYRGANYKYPYFLSDNNLPNDSSH 290

Query: 1892 DAMQHMDGDDKNCNEKESHSSEMNSATHAGQNSNFKTAKPALIQGVGTPNKVRFQLPGEA 1713
            DA      +++  + KE  SS       AG     K A  +LIQGVG P +VRFQLPGEA
Sbjct: 291  DASSDSQMNNEEHDGKEVCSSGKGDVKSAGPMPANKIAPLSLIQGVGYPTRVRFQLPGEA 350

Query: 1712 ELVEDADKLLEGLGPQFTDWWGYDPLPVDADLLPAVIPGFRKPFRLLPYGVKSKLTDDEM 1533
            +L E+AD+LL+GLGP+FTDWWGYDPLP+DADLLPAV+PG+R+PFRLLPYG+K KLT+DEM
Sbjct: 351  QLEEEADRLLDGLGPRFTDWWGYDPLPIDADLLPAVVPGYRRPFRLLPYGLKPKLTNDEM 410

Query: 1532 TTLRRLGRPLPSHFALGRNMKLQGLAAAIIKLWERCEIVKIAVKRGVQNTDSETMAEEIK 1353
            T LRRLGRPLP HFALGRN KLQGLAA++IKLWE+CEI KIAVKRGVQNT+SE MAEE+K
Sbjct: 411  TVLRRLGRPLPCHFALGRNRKLQGLAASMIKLWEKCEIAKIAVKRGVQNTNSEMMAEELK 470

Query: 1352 YLTGGTLLSRNNEFIVFYRGKDFLPAAVSSAIEQRR------------------NIVTNK 1227
             LTGGTLLSR+ EFIVFYRGKDFLP AVSSAIE RR                  N   ++
Sbjct: 471  NLTGGTLLSRDREFIVFYRGKDFLPPAVSSAIEARRKYGIHRGKQKIDHHRLAINAEESE 530

Query: 1226 LKAENSSSD------------AVIKQRMFTKAEAALKRTSNKLSMXXXXXXXXXXXXXXX 1083
            L     +SD            ++ K+RM   AEA ++RT+ KLSM               
Sbjct: 531  LGTSEHASDKDCDGTDDQKTNSLSKRRMLRSAEAVVERTNIKLSMALEKKERAEKLLAEL 590

Query: 1082 XXXXSPPEQEIVKEGITEEERYMLRKIGLKMSPFLLLGRRGVFDGTVENMHLHWKYRELV 903
                 P + EI KEGITEEERYMLRK+GL+M PFLLLGRRG+FDGTVENMHLHWKYRELV
Sbjct: 591  EEAQIPQQPEIDKEGITEEERYMLRKVGLRMKPFLLLGRRGIFDGTVENMHLHWKYRELV 650

Query: 902  KIICKQGSLESVHQIARTLEAESGGILVAVERVNKGYAIIVYRGKNYSRPSTLRPQTLLN 723
            KII    S+E +H +ARTLEAESGGILVAVERV+KGYAII+YRGKNY RP++LRPQTLLN
Sbjct: 651  KIISNGRSIEDIHGVARTLEAESGGILVAVERVSKGYAIIMYRGKNYKRPASLRPQTLLN 710

Query: 722  KKQALKRSIEAQRCESLKLHVLKLDKNINELKRQMV---KD-EANSKQIAEELRSDMATD 555
            K++ALKRS+EAQR ESLKLHVL+L +NI+ELK Q+V   KD E NSKQ+ ++ R  +A +
Sbjct: 711  KREALKRSLEAQRRESLKLHVLRLTRNIDELKHQLVSRIKDKETNSKQLVDKSRLHLARE 770

Query: 554  RHEACSDSINCNSPKEASVDNQQAIQEQP----VELIDSGGARQSEPESSAGLIHKEKQL 387
            R+ A    I+ +   ++S D+ Q            + DS    ++ PE S+  + KE + 
Sbjct: 771  RYGADVILIHSSDGMDSSRDSLQTSHNDKRIDFPSMCDS-DTDEANPEPSSESVLKEIET 829

Query: 386  DEVNDSVVDTGHC------------------VSNNKAMEXXXXXXXXXXXXSAP-VIKGS 264
            + + D + + G C                  V++ + ME                 +   
Sbjct: 830  NVLTD-MNEEGECTTCSEDLVSQGETSCYAIVNHEETMESSVKSSKNEFKPPVQRPVDTR 888

Query: 263  SNELPSTSLYLSNRERLLLRKQALKIKKRPVLAIGKSNIMTGVAKAINTHFQKHPFAIVN 84
            SNE+P  +  LSNRERLLLRKQAL++KKRPV+A+G+SNI+TGVAK I  HFQKHP AIVN
Sbjct: 889  SNEMPFRAAPLSNRERLLLRKQALRMKKRPVIAVGRSNIVTGVAKTIKAHFQKHPLAIVN 948

Query: 83   VKGRAKGTSVQEVVSELEQATGAVLVS 3
            VKGRAKGTSVQEV+ +LEQATGAVLVS
Sbjct: 949  VKGRAKGTSVQEVIFKLEQATGAVLVS 975


>XP_016672841.1 PREDICTED: CRM-domain containing factor CFM2, chloroplastic-like
            isoform X5 [Gossypium hirsutum]
          Length = 1009

 Score =  934 bits (2415), Expect = 0.0
 Identities = 517/924 (55%), Positives = 635/924 (68%), Gaps = 63/924 (6%)
 Frame = -3

Query: 2585 TLDPTKFVIRCSGSETR----TVPDSAIQRIADKLRSLGITDHQSPXXXXXXXXXA-GEI 2421
            TL P K++     S TR     +P SAIQRIADKLRSLG ++  +P           GEI
Sbjct: 32   TLKPRKYIFLIRSSITRPENQALPQSAIQRIADKLRSLGFSETPNPQPESESGSGCPGEI 91

Query: 2420 FVPLPHQLPKQRVGHTIDQSWSTPENPVPGKGF----AALSENEVEKQRRQNXXXXXXXX 2253
            FVPLP +LPK RVGHTID SWSTPENPVP  G       +   +++++R++         
Sbjct: 92   FVPLPEKLPKYRVGHTIDTSWSTPENPVPDPGSDPGSLMVRFRDMKRERKKMGRVKEEER 151

Query: 2252 XXXXRVEAPTVAELSLTEAEIMRLRKLGFGMKKKLKVGKAGITEGIVNGIHERWRSHEVV 2073
                    P++AEL L+ AE+ RLR +G G K+KLKVGKAGITEGIVNGIHERWR  EVV
Sbjct: 152  V------VPSLAELKLSAAELKRLRTVGIGEKRKLKVGKAGITEGIVNGIHERWRKSEVV 205

Query: 2072 KIVCEDLCRTNMKRTHDLLERKTGGLVVWRSGSKIILYRGIDYKYPYFLSDKVLRDENNG 1893
            +IVCED+C+ NMKRTH++LERKTGGLV+WRSGSKIILYRG +YKYPYF +DK+   +++ 
Sbjct: 206  RIVCEDICKMNMKRTHEVLERKTGGLVIWRSGSKIILYRGANYKYPYFSADKIGTHDSSS 265

Query: 1892 DAMQHMDGDDKNCNEKESHSSEMNSATHAGQNSNFKTAKPALIQGVGTPNKVRFQLPGEA 1713
            +A    + D+K  +E ES SSE N    +   +  K  K ALI GVG+P++VRFQLPGEA
Sbjct: 266  NASSDTNVDNKELDETESCSSEFNGVKTSTPKATDKMTKRALIHGVGSPSRVRFQLPGEA 325

Query: 1712 ELVEDADKLLEGLGPQFTDWWGYDPLPVDADLLPAVIPGFRKPFRLLPYGVKSKLTDDEM 1533
            ELV +AD+LL+GLGP+FTDWWGY+PLPVD DLLPA+IPG+R+PFRLLPYGVKS LT+DEM
Sbjct: 326  ELVAEADRLLDGLGPRFTDWWGYEPLPVDGDLLPAIIPGYRRPFRLLPYGVKSLLTNDEM 385

Query: 1532 TTLRRLGRPLPSHFALGRNMKLQGLAAAIIKLWERCEIVKIAVKRGVQNTDSETMAEEIK 1353
            TTLRRLGRPLP HFALGRN KLQGLAA+IIKLWE+CEI KIAVKRGVQNT+SE MAEE+K
Sbjct: 386  TTLRRLGRPLPCHFALGRNRKLQGLAASIIKLWEKCEIAKIAVKRGVQNTNSELMAEELK 445

Query: 1352 YLTGGTLLSRNNEFIVFYRGKDFLPAAVSSAIEQRRNIVTN-----------------KL 1224
            +LTGGTLLSR+ +FIV YRGKDFLP+AVSSAIE+RR  V +                 K+
Sbjct: 446  WLTGGTLLSRDKDFIVLYRGKDFLPSAVSSAIEERRKHVIHAENQSGKTMQEVHGEGAKI 505

Query: 1223 KAEN-------SSSDAVIKQRMFTKAEAALKRTSNKLSMXXXXXXXXXXXXXXXXXXXSP 1065
             +EN       S SD    ++    AEA +KRTS+KLSM                    P
Sbjct: 506  ASENDINSAKDSKSDVFSVRKNLNSAEATIKRTSSKLSMALEKKAKAEKLLAELEQEVIP 565

Query: 1064 PEQEIVKEGITEEERYMLRKIGLKMSPFLLLGRRGVFDGTVENMHLHWKYRELVKIICKQ 885
             + EI KEGIT EERYMLRK+GL+M PFLLLGRRGVFDGTVENMHLHWKYRELVKII K+
Sbjct: 566  QQSEIDKEGITREERYMLRKVGLRMKPFLLLGRRGVFDGTVENMHLHWKYRELVKIISKE 625

Query: 884  GSLESVHQIARTLEAESGGILVAVERVNKGYAIIVYRGKNYSRPSTLRPQTLLNKKQALK 705
             ++E+VHQ A+ LEAESGGILVAVERV+KGYAII YRGKNY RP+ LRPQTLL K++A+K
Sbjct: 626  TNVEAVHQEAQILEAESGGILVAVERVSKGYAIIFYRGKNYERPTCLRPQTLLTKREAMK 685

Query: 704  RSIEAQRCESLKLHVLKLDKNINELKRQMVKD-----EANSKQIAEELRSDM----ATDR 552
            RS+E QR +SLKLH+LKL +NI+ELK Q+V D     E  + Q  +  RSD+    + + 
Sbjct: 686  RSLEEQRRKSLKLHILKLTRNIDELKHQLVVDKEVEEEMETLQSVKCARSDIEYHASPEG 745

Query: 551  HEACSDSINCNSPKEASVDNQQAIQE-------QPVELIDSGGARQSEPESSAGLIHKEK 393
            H    D     S K   +    +I E       +P  + D     ++EPE S+  +++ K
Sbjct: 746  HLEAKDKSESTSMKNDRMVAAVSISEPSEQVLVEPSSIHDGVENHKTEPEFSSESVNRRK 805

Query: 392  QLDEVN------DSVVDTGH-------CVSNNKAME-XXXXXXXXXXXXSAPVIKGSSNE 255
               E+       + V  + H          NN  ME              +P     SN+
Sbjct: 806  HNTELRALHSQFEMVESSSHHDNLMEENAYNNGPMESMVESASKNLDVLISPAADNVSNK 865

Query: 254  LPSTSLYLSNRERLLLRKQALKIKKRPVLAIGKSNIMTGVAKAINTHFQKHPFAIVNVKG 75
            + ST+ +LSN+ERLLLRKQAL +KKRPVLA+G+SNI+TGVAK INTHF+KHP AIVNVKG
Sbjct: 866  MASTAKFLSNKERLLLRKQALNMKKRPVLAVGRSNIVTGVAKTINTHFKKHPLAIVNVKG 925

Query: 74   RAKGTSVQEVVSELEQATGAVLVS 3
            RAKGTSVQEVV +L++ATGAVLVS
Sbjct: 926  RAKGTSVQEVVLKLQEATGAVLVS 949


>XP_010660973.1 PREDICTED: CRM-domain containing factor CFM2, chloroplastic isoform
            X2 [Vitis vinifera]
          Length = 1044

 Score =  934 bits (2415), Expect = 0.0
 Identities = 522/927 (56%), Positives = 639/927 (68%), Gaps = 65/927 (7%)
 Frame = -3

Query: 2588 KTLDP--TKFVIRCSGSETRTVPDSAIQRIADKLRSLGITDHQSPXXXXXXXXXA----G 2427
            KTL+P  +KF++R S  + +T+P +AIQRIA+KLRSLG  D             A    G
Sbjct: 56   KTLNPKPSKFILRASNPDAQTLPKTAIQRIAEKLRSLGYVDGDESRKVLSSDKPANGSAG 115

Query: 2426 EIFVPLPHQLPKQRVGHTIDQSWSTPENPVP--GKGFAALSENEVEKQRRQNXXXXXXXX 2253
            EIFVPLP+QLPK RVGHTIDQSWS PENPVP  G G      +E+ K+ ++         
Sbjct: 116  EIFVPLPNQLPKHRVGHTIDQSWSLPENPVPEPGTGGVITRFHELRKEVKREKKLVRKED 175

Query: 2252 XXXXRVEAPTVAELSLTEAEIMRLRKLGFGMKKKLKVGKAGITEGIVNGIHERWRSHEVV 2073
                   APT+AEL+L E E+ RL+ +G  ++KKLKVGKAGITEGIVNGIHERWR  EVV
Sbjct: 176  E-----RAPTLAELTLPEEELRRLKGIGIQIRKKLKVGKAGITEGIVNGIHERWRRAEVV 230

Query: 2072 KIVCEDLCRTNMKRTHDLLERKTGGLVVWRSGSKIILYRGIDYKYPYFLSDKVLRDENNG 1893
            KI CED+C+ NMKRTHD+LERKTGGLV+WRSGS IILYRG +YKYPYFLSD  L ++++ 
Sbjct: 231  KIRCEDICKLNMKRTHDILERKTGGLVIWRSGSYIILYRGANYKYPYFLSDNNLPNDSSH 290

Query: 1892 DAMQHMDGDDKNCNEKESHSSEMNSATHAGQNSNFKTAKPALIQGVGTPNKVRFQLPGEA 1713
            DA      +++  + KE  SS       AG     K A  +LIQGVG P +VRFQLPGEA
Sbjct: 291  DASSDSQMNNEEHDGKEVCSSGKGDVKSAGPMPANKIAPLSLIQGVGYPTRVRFQLPGEA 350

Query: 1712 ELVEDADKLLEGLGPQFTDWWGYDPLPVDADLLPAVIPGFRKPFRLLPYGVKSKLTDDEM 1533
            +L E+AD+LL+GLGP+FTDWWGYDPLP+DADLLPAV+PG+R+PFRLLPYG+K KLT+DEM
Sbjct: 351  QLEEEADRLLDGLGPRFTDWWGYDPLPIDADLLPAVVPGYRRPFRLLPYGLKPKLTNDEM 410

Query: 1532 TTLRRLGRPLPSHFALGRNMKLQGLAAAIIKLWERCEIVKIAVKRGVQNTDSETMAEEIK 1353
            T LRRLGRPLP HFALGRN KLQGLAA++IKLWE+CEI KIAVKRGVQNT+SE MAEE+K
Sbjct: 411  TVLRRLGRPLPCHFALGRNRKLQGLAASMIKLWEKCEIAKIAVKRGVQNTNSEMMAEELK 470

Query: 1352 YLTGGTLLSRNNEFIVFYRGKDFLPAAVSSAIEQRR------------------NIVTNK 1227
             LTGGTLLSR+ EFIVFYRGKDFLP AVSSAIE RR                  N   ++
Sbjct: 471  NLTGGTLLSRDREFIVFYRGKDFLPPAVSSAIEARRKYGIHRGKQKIDHHRLAINAEESE 530

Query: 1226 LKAENSSSD------------AVIKQRMFTKAEAALKRTSNKLSMXXXXXXXXXXXXXXX 1083
            L     +SD            ++ K+RM   AEA ++RT+ KLSM               
Sbjct: 531  LGTSEHASDKDCDGTDDQKTNSLSKRRMLRSAEAVVERTNIKLSMALEKKERAEKLLAEL 590

Query: 1082 XXXXSPPEQEIVKEGITEEERYMLRKIGLKMSPFLLLGRRGVFDGTVENMHLHWKYRELV 903
                 P + EI KEGITEEERYMLRK+GL+M PFLLLGRRG+FDGTVENMHLHWKYRELV
Sbjct: 591  EEAQIPQQPEIDKEGITEEERYMLRKVGLRMKPFLLLGRRGIFDGTVENMHLHWKYRELV 650

Query: 902  KIICKQGSLESVHQIARTLEAESGGILVAVERVNKGYAIIVYRGKNYSRPSTLRPQTLLN 723
            KII    S+E +H +ARTLEAESGGILVAVERV+KGYAII+YRGKNY RP++LRPQTLLN
Sbjct: 651  KIISNGRSIEDIHGVARTLEAESGGILVAVERVSKGYAIIMYRGKNYKRPASLRPQTLLN 710

Query: 722  KKQALKRSIEAQRCESLKLHVLKLDKNINELKRQM---VKD-EANSKQIAEELRSDMATD 555
            K++ALKRS+EAQR ESLKLHVL+L +NI+ELK Q+   +KD E NSKQ+ ++ R  +A +
Sbjct: 711  KREALKRSLEAQRRESLKLHVLRLTRNIDELKHQLFSRIKDKETNSKQLVDKSRLHLARE 770

Query: 554  RHEACSDSINCNSPKEASVDNQQAIQEQP----VELIDSGGARQSEPESSAGLIHKEKQL 387
            R+ A    I+ +   ++S D+ Q            + DS    ++ PE S+  + KE + 
Sbjct: 771  RYGADVILIHSSDGMDSSRDSLQTSHNDKRIDFPSMCDS-DTDEANPEPSSESVLKEIET 829

Query: 386  DEVNDSVVDTGHC------------------VSNNKAMEXXXXXXXXXXXXSAP-VIKGS 264
            + + D + + G C                  V++ + ME                 +   
Sbjct: 830  NVLTD-MNEEGECTTCSEDLVSQGETSCYAIVNHEETMESSVKSSKNEFKPPVQRPVDTR 888

Query: 263  SNELPSTSLYLSNRERLLLRKQALKIKKRPVLAIGKSNIMTGVAKAINTHFQKHPFAIVN 84
            SNE+P  +  LSNRERLLLRKQAL++KKRPV+A+G+SNI+TGVAK I  HFQKHP AIVN
Sbjct: 889  SNEMPFRAAPLSNRERLLLRKQALRMKKRPVIAVGRSNIVTGVAKTIKAHFQKHPLAIVN 948

Query: 83   VKGRAKGTSVQEVVSELEQATGAVLVS 3
            VKGRAKGTSVQEV+ +LEQATGAVLVS
Sbjct: 949  VKGRAKGTSVQEVIFKLEQATGAVLVS 975