BLASTX nr result

ID: Glycyrrhiza35_contig00020850 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza35_contig00020850
         (223 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_012572943.1 PREDICTED: WD repeat-containing protein 44 isofor...    56   2e-07
XP_012572935.1 PREDICTED: WD repeat-containing protein 44 isofor...    56   2e-07
XP_013464737.1 transducin/WD-like repeat-protein [Medicago trunc...    51   1e-05

>XP_012572943.1 PREDICTED: WD repeat-containing protein 44 isoform X3 [Cicer
           arietinum] XP_012572946.1 PREDICTED: WD
           repeat-containing protein 44 isoform X4 [Cicer
           arietinum]
          Length = 709

 Score = 55.8 bits (133), Expect = 2e-07
 Identities = 32/55 (58%), Positives = 33/55 (60%), Gaps = 6/55 (10%)
 Frame = +3

Query: 75  RRSQSSADFGPGTSTSA------VAAEERAECGGDEVERGNEGACTIRDLDNGKE 221
           RRS S ADF PGTS SA      VA     EC   E E+  E ACTIRDLDNGKE
Sbjct: 167 RRSHSGADFLPGTSASAAADTTEVAVSGEVECDEVEKEKEKEEACTIRDLDNGKE 221


>XP_012572935.1 PREDICTED: WD repeat-containing protein 44 isoform X1 [Cicer
           arietinum] XP_012572940.1 PREDICTED: WD
           repeat-containing protein 44 isoform X2 [Cicer
           arietinum]
          Length = 863

 Score = 55.8 bits (133), Expect = 2e-07
 Identities = 32/55 (58%), Positives = 33/55 (60%), Gaps = 6/55 (10%)
 Frame = +3

Query: 75  RRSQSSADFGPGTSTSA------VAAEERAECGGDEVERGNEGACTIRDLDNGKE 221
           RRS S ADF PGTS SA      VA     EC   E E+  E ACTIRDLDNGKE
Sbjct: 167 RRSHSGADFLPGTSASAAADTTEVAVSGEVECDEVEKEKEKEEACTIRDLDNGKE 221


>XP_013464737.1 transducin/WD-like repeat-protein [Medicago truncatula] KEH38772.1
           transducin/WD-like repeat-protein [Medicago truncatula]
          Length = 858

 Score = 51.2 bits (121), Expect = 1e-05
 Identities = 31/59 (52%), Positives = 37/59 (62%), Gaps = 10/59 (16%)
 Frame = +3

Query: 75  RRSQSSADFGPGTSTS----------AVAAEERAECGGDEVERGNEGACTIRDLDNGKE 221
           RRS S  DF PG S++          AV ++E  EC  DE+E+G E ACTIRDLDNGKE
Sbjct: 165 RRSHSGVDFLPGNSSTLPDTGEISGEAVLSKE-IEC--DEIEKGEEQACTIRDLDNGKE 220


Top