BLASTX nr result

ID: Glycyrrhiza35_contig00019685 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza35_contig00019685
         (396 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GAU11368.1 hypothetical protein TSUD_343590 [Trifolium subterran...    60   2e-08
XP_017417295.1 PREDICTED: uncharacterized protein LOC108328031 [...    58   2e-07

>GAU11368.1 hypothetical protein TSUD_343590 [Trifolium subterraneum]
          Length = 231

 Score = 60.5 bits (145), Expect = 2e-08
 Identities = 30/35 (85%), Positives = 33/35 (94%)
 Frame = -2

Query: 197 RLSVCTSSTLCGVDDDVDVENLASMCMSHLSIESF 93
           RLSVCTSST+CGVD+DVD  NLASMCMS+LSIESF
Sbjct: 32  RLSVCTSSTICGVDEDVD--NLASMCMSNLSIESF 64


>XP_017417295.1 PREDICTED: uncharacterized protein LOC108328031 [Vigna angularis]
           KOM39335.1 hypothetical protein LR48_Vigan03g271700
           [Vigna angularis] BAT86183.1 hypothetical protein
           VIGAN_04381000 [Vigna angularis var. angularis]
          Length = 264

 Score = 58.2 bits (139), Expect = 2e-07
 Identities = 40/78 (51%), Positives = 42/78 (53%)
 Frame = -2

Query: 326 MASDETMMTFQSSLQXXXXXXXXXXXXXXXXXXXXXXXXXXXSRLSVCTSSTLCGVDDDV 147
           MASDETM TF SSLQ                           SRLSVCTSST    D+D 
Sbjct: 1   MASDETM-TFLSSLQEEDFDDDDDDDDGFDDHHLRQPHPHNLSRLSVCTSSTFGVDDNDD 59

Query: 146 DVENLASMCMSHLSIESF 93
           DV NLASMC+S LSIESF
Sbjct: 60  DVNNLASMCVSQLSIESF 77


Top